Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACSS3	79611	genome.wustl.edu	37	12	81545639	81545639	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	12	81545639	81545639	C	T	SNP	ACSS3	NM_024560.2	human	genbank	58_37c	+1	validated	missense	c.938	p.T313I	1.000	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors
AHCTF1	25909	genome.wustl.edu	37	1	247079596	247079596	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	1	247079596	247079596	C	A	SNP	AHCTF1	NM_015446.4	human	genbank	58_37c	-1	validated	nonsense	c.223	p.E75*	0.999	NULL	PatternScan_TUBULIN_B_AUTOREG,HMMPfam_AT_hook,HMMSmart_AT_hook	-	no_errors
AMOTL1	154810	genome.wustl.edu	37	11	94532836	94532836	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	11	94532836	94532836	G	A	SNP	AMOTL1	NM_130847.2	human	genbank	58_37c	+1	reviewed	silent	c.480	p.P160	0.997	NULL	NULL	-	no_errors
ANPEP	290	genome.wustl.edu	37	15	90349393	90349393	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	15	90349393	90349393	C	T	SNP	ANPEP	NM_001150.2	human	genbank	58_37c	-1	reviewed	missense	c.422	p.G141D	0.024	HMMPfam_Peptidase_M1,superfamily_SSF63737	PatternScan_ZINC_PROTEASE,HMMPfam_Peptidase_M1,superfamily_SSF55486,superfamily_SSF63737	-	no_errors
CEPT1	10390	genome.wustl.edu	37	1	111724830	111724830	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	1	111724830	111724830	A	T	SNP	CEPT1	NM_001007794.1	human	genbank	58_37c	+1	reviewed	missense	c.736	p.M246L	1.000	HMMPfam_CDP-OH_P_transf	HMMPfam_CDP-OH_P_transf,PatternScan_CDP_ALCOHOL_P_TRANSF	-	no_errors
DPP10	57628	genome.wustl.edu	37	2	116572515	116572515	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	2	116572515	116572515	A	T	SNP	DPP10	NM_020868.3	human	genbank	58_37c	+1	validated	missense	c.1847	p.H616L	1.000	HMMPfam_Peptidase_S9,superfamily_alpha/beta-Hydrolases	HMMPfam_Peptidase_S9,HMMPfam_DPPIV_N,superfamily_alpha/beta-Hydrolases,superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain	-	no_errors
DPYSL2	1808	genome.wustl.edu	37	8	26484190	26484190	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	8	26484190	26484190	G	A	SNP	DPYSL2	NM_001386.4	human	genbank	58_37c	+1	validated	missense	c.536	p.C179Y	1.000	HMMPfam_Amidohydro_1,superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases	HMMPfam_Amidohydro_1,superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases	-	no_errors
FAM22G	441457	genome.wustl.edu	37	9	99701178	99701178	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	9	99701178	99701178	A	C	SNP	FAM22G	ENST00000372322	human	ensembl	58_37c	+1	known	missense	c.1973	p.Q658P	0.009	NULL	NULL	-	no_errors
FCGR2A	2212	genome.wustl.edu	37	1	161475284	161475284	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	1	161475284	161475284	G	A	SNP	FCGR2A	NM_001136219.1	human	genbank	58_37c	+1	reviewed	silent	c.27	p.Q9	0.000	NULL	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
FLJ10661	286042	genome.wustl.edu	37	8	8097217	8097217	+	RNA	SNP	A	A	G	rs2980442	byCluster;byFrequency;by1000genomes	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	8	8097217	8097217	A	G	SNP	FLJ10661	NR_024363.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.007	-	-	-	pseudogene
GAB4	128954	genome.wustl.edu	37	22	17450868	17450868	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	22	17450868	17450868	C	G	SNP	GAB4	NM_001037814.1	human	genbank	58_37c	-1	provisional	missense	c.902	p.R301T	0.989	NULL	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729	-	no_errors
GTSE1	51512	genome.wustl.edu	37	22	46712235	46712235	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	22	46712235	46712235	A	T	SNP	GTSE1	NM_016426.6	human	genbank	58_37c	+1	reviewed	missense	c.1358	p.D453V	0.000	NULL	NULL	-	no_errors
HRNR	388697	genome.wustl.edu	37	1	152185882	152185882	+	Silent	SNP	G	G	A	rs77559827	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	1	152185882	152185882	G	A	SNP	HRNR	NM_001009931.1	human	genbank	58_37c	-1	validated	silent	c.8223	p.G2741	0.060	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
LYZL6	57151	genome.wustl.edu	37	17	34264775	34264775	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	17	34264775	34264775	G	A	SNP	LYZL6	NM_020426.1	human	genbank	58_37c	-1	provisional	silent	c.285	p.H95	0.078	HMMPfam_Lys,HMMSmart_LYZ1,PatternScan_LACTALBUMIN_LYSOZYME_1,superfamily_SSF53955	HMMPfam_Lys,HMMSmart_LYZ1,PatternScan_LACTALBUMIN_LYSOZYME_1,superfamily_SSF53955	-	no_errors
MEF2C	4208	genome.wustl.edu	37	5	88018447	88018447	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	5	88018447	88018447	G	A	SNP	MEF2C	NM_002397.3	human	genbank	58_37c	-1	validated	nonsense	c.1396	p.R466*	1.000	NULL	HMMPfam_SRF-TF,HMMSmart_SM00432,PatternScan_MADS_BOX_1,superfamily_SRF-like	-	no_errors
MYO5A	4644	genome.wustl.edu	37	15	52620094	52620094	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	15	52620094	52620094	C	T	SNP	MYO5A	NM_000259.3	human	genbank	58_37c	-1	reviewed	silent	c.4590	p.R1530	1.000	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_Myosin S1 fragment N-terminal domain,HMMPfam_DIL,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
PCDH7	5099	genome.wustl.edu	37	4	30725361	30725361	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	4	30725361	30725361	G	A	SNP	PCDH7	NM_032457.3	human	genbank	58_37c	+1	reviewed	missense	c.2176	p.D726N	1.000	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,HMMPfam_Protocadherin,superfamily_Cadherin	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	3	178952085	178952085	A	T	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047L	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
SFPQ	6421	genome.wustl.edu	37	1	35656463	35656463	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	1	35656463	35656463	T	C	SNP	SFPQ	NM_005066.2	human	genbank	58_37c	-1	validated	missense	c.1151	p.N384S	1.000	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMPfam_NOPS,superfamily_RNA-binding domain RBD	-	no_errors
SILV	6490	genome.wustl.edu	37	12	56349111	56349111	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	12	56349111	56349111	G	A	SNP	SILV	NM_006928.3	human	genbank	58_37c	-1	validated	silent	c.1797	p.I599	0.192	NULL	HMMPfam_PKD,HMMSmart_SM00089,superfamily_PKD domain	-	no_errors
SMYD1	150572	genome.wustl.edu	37	2	88390554	88390554	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	2	88390554	88390554	C	T	SNP	SMYD1	NM_198274.2	human	genbank	58_37c	+1	provisional	silent	c.552	p.L184	1.000	HMMSmart_SET,superfamily_SSF82199	HMMPfam_SET,HMMSmart_SET,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,superfamily_SSF82199	-	no_errors
SRRM4	84530	genome.wustl.edu	37	12	119583290	119583290	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	12	119583290	119583290	C	T	SNP	SRRM4	NM_194286.2	human	genbank	58_37c	+1	validated	silent	c.876	p.S292	1.000	NULL	NULL	-	no_errors
STAG1	10274	genome.wustl.edu	37	3	136136813	136136813	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	3	136136813	136136813	C	G	SNP	STAG1	NM_005862.2	human	genbank	58_37c	-1	reviewed	missense	c.2110	p.A704P	1.000	superfamily_ARM-type_fold	HMMPfam_STAG,superfamily_ARM-type_fold	-	no_errors
TDRD6	221400	genome.wustl.edu	37	6	46657115	46657115	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	6	46657115	46657115	A	G	SNP	TDRD6	NM_001010870.2	human	genbank	58_37c	+1	validated	missense	c.1250	p.H417R	0.982	NULL	HMMSmart_TUDOR,HMMPfam_TUDOR,superfamily_SSF63748	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577539	7577539	+	Missense_Mutation	SNP	G	G	A	rs121912651	byCluster	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	17	7577539	7577539	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.742	p.R248W	1.000	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRAT1	50852	genome.wustl.edu	37	3	108549621	108549621	+	Nonsense_Mutation	SNP	C	C	T	rs148894492	byCluster;by1000genomes	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	3	108549621	108549621	C	T	SNP	TRAT1	NM_016388.2	human	genbank	58_37c	+1	validated	nonsense	c.112	p.R38*	0.838	NULL	NULL	-	no_errors
UBR4	23352	genome.wustl.edu	37	1	19464532	19464532	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	1	19464532	19464532	C	G	SNP	UBR4	NM_020765.2	human	genbank	58_37c	-1	validated	missense	c.8875	p.E2959Q	1.000	NULL	HMMPfam_zf-UBR,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00396,superfamily_ARM repeat,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors
UNC13C	440279	genome.wustl.edu	37	15	54556502	54556502	+	Silent	SNP	T	T	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	15	54556502	54556502	T	A	SNP	UNC13C	NM_001080534.1	human	genbank	58_37c	+1	provisional	silent	c.3585	p.I1195	1.000	NULL	HMMPfam_C2,HMMSmart_C2,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_C2_CaLB,HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD,superfamily_SSF57889	-	no_errors
UPF1	5976	genome.wustl.edu	37	19	18974986	18974986	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	19	18974986	18974986	G	T	SNP	UPF1	NM_002911.3	human	genbank	58_37c	+1	reviewed	missense	c.2783	p.R928L	1.000	NULL	HMMPfam_ResIII,HMMPfam_UPF1_Zn_bind,superfamily_SSF52540	-	no_errors
WDR48	57599	genome.wustl.edu	37	3	39136217	39136217	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	3	39136217	39136217	C	T	SNP	WDR48	NM_020839.2	human	genbank	58_37c	+1	provisional	missense	c.2017	p.R673C	1.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ZFPM2	23414	genome.wustl.edu	37	8	106431410	106431410	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	8	106431410	106431410	T	A	SNP	ZFPM2	NM_012082.3	human	genbank	58_37c	+1	reviewed	missense	c.79	p.C27S	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF415	55786	genome.wustl.edu	37	19	53612661	53612661	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BC-01A-22D-A099-09	TCGA-BH-A0BC-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	ca5a91e0-d201-487b-9ea8-bad7d3f9d2dc	b1d4c4f2-a008-4a03-9885-33058dd170e7	19	53612661	53612661	C	A	SNP	ZNF415	NM_018355.2	human	genbank	58_37c	-1	validated	nonsense	c.637	p.E213*	0.907	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
