Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCB6	0	genome.wustl.edu	37	2	220080803	220080803	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	220080803	220080803	G	C	SNP	ABCB6	NM_005689.1	human	genbank	58_37c	-1	reviewed	nonsense	c.1070	p.S357*	1.000	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCB6	0	genome.wustl.edu	37	2	220082409	220082409	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	220082409	220082409	C	A	SNP	ABCB6	NM_005689.1	human	genbank	58_37c	-1	reviewed	missense	c.670	p.D224Y	1.000	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACACA	0	genome.wustl.edu	37	17	35597396	35597396	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	35597396	35597396	C	G	SNP	ACACA	NM_198834.1	human	genbank	58_37c	-1	reviewed	missense	c.3117	p.Q1039H	1.000	HMMPfam_ACC_central	HMMPfam_Carboxyl_trans,HMMPfam_Biotin_lipoyl,PatternScan_BIOTIN,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,HMMPfam_CPSase_L_chain,HMMPfam_Biotin_carb_C,superfamily_Hybrid_motif,superfamily_Rudmnt_hyb_motif,HMMPfam_ACC_central,superfamily_PreATP-grasp-like,superfamily_SSF52096,superfamily_SSF56059	-	no_errors
ACADVL	0	genome.wustl.edu	37	17	7123231	7123232	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	7123231	7123232	-	T	INS	ACADVL	ENST00000356839	human	ensembl	58_37c	+1	known	frame_shift_ins	c.66_67	p.P22fs	0.000:0.000	NULL	PatternScan_ACYL_COA_DH_1,PatternScan_ACYL_COA_DH_2,HMMPfam_Acyl-CoA_dh_1,HMMPfam_Acyl-CoA_dh_M,HMMPfam_Acyl-CoA_dh_N,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like,superfamily_Acyl-CoA dehydrogenase NM domain-like	-	no_errors
ACSF2	0	genome.wustl.edu	37	17	48551306	48551306	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	48551306	48551306	C	T	SNP	ACSF2	NM_025149.4	human	genbank	58_37c	+1	validated	missense	c.1669	p.R557W	1.000	superfamily_SSF56801	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_SSF56801	-	no_errors
ALDH1L2	0	genome.wustl.edu	37	12	105440687	105440687	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	105440687	105440687	C	G	SNP	ALDH1L2	NM_001034173.3	human	genbank	58_37c	-1	reviewed	missense	c.1747	p.E583Q	1.000	HMMPfam_Aldedh,superfamily_ALDH-like	PatternScan_GART,HMMPfam_Formyl_trans_N,superfamily_Formyltransferase,HMMPfam_Formyl_trans_C,PatternScan_PHOSPHOPANTETHEINE,superfamily_FMT C-terminal domain-like,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_CYS,PatternScan_ALDEHYDE_DEHYDR_GLU,superfamily_ALDH-like	-	no_errors
AMBN	0	genome.wustl.edu	37	4	71469607	71469607	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	4	71469607	71469607	G	C	SNP	AMBN	NM_016519.4	human	genbank	58_37c	+1	reviewed	missense	c.767	p.R256T	1.000	HMMPfam_Amelin,HMMSmart_SM00817	HMMPfam_Amelin,HMMSmart_SM00817	-	no_errors
ANKRD36	0	genome.wustl.edu	37	2	97860646	97860646	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	97860646	97860646	C	A	SNP	ANKRD36	ENST00000461153	human	ensembl	58_37c	+1	known	missense	c.2339	p.S780Y	0.001	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
APH1B	0	genome.wustl.edu	37	15	63569883	63569884	+	Frame_Shift_Del	DEL	TA	TA	-	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	TA	TA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	15	63569883	63569884	TA	-	DEL	APH1B	NM_031301.3	human	genbank	58_37c	+1	validated	frame_shift_del	c.61_62	p.Y21fs	0.986:0.882	HMMPfam_Aph-1	HMMPfam_Aph-1	-	no_errors
APOB48R	0	genome.wustl.edu	37	16	28507855	28507855	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	28507855	28507855	G	C	SNP	APOB48R	NM_018690.2	human	genbank	58_37c	+1	reviewed	missense	c.1466	p.R489T	0.001	NULL	NULL	-	no_errors
ARPC5	0	genome.wustl.edu	37	1	183599740	183599740	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	183599740	183599740	G	A	SNP	ARPC5	NM_005717.2	human	genbank	58_37c	-1	reviewed	silent	c.249	p.L83	1.000	HMMPfam_P16-Arc,superfamily_Arp2/3 complex 16 kDa subunit ARPC5	HMMPfam_P16-Arc,superfamily_Arp2/3 complex 16 kDa subunit ARPC5	-	no_errors
ATF7IP	0	genome.wustl.edu	37	12	14614037	14614037	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	14614037	14614037	G	A	SNP	ATF7IP	NM_018179.3	human	genbank	58_37c	+1	validated	missense	c.2767	p.E923K	1.000	NULL	HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
ATM	0	genome.wustl.edu	37	11	108124566	108124566	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	11	108124566	108124566	G	A	SNP	ATM	NM_000051.3	human	genbank	58_37c	+1	reviewed	missense	c.1924	p.E642K	0.994	superfamily_ARM repeat	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
BAIAP2L1	0	genome.wustl.edu	37	7	97946565	97946565	+	Missense_Mutation	SNP	C	C	T	rs140166928	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	7	97946565	97946565	C	T	SNP	BAIAP2L1	NM_018842.4	human	genbank	58_37c	-1	reviewed	missense	c.452	p.R151Q	0.984	HMMPfam_IMD	HMMSmart_SH3,superfamily_SH3,HMMPfam_SH3_2,HMMPfam_IMD	-	no_errors
BCAP31	0	genome.wustl.edu	37	X	152986357	152986357	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	X	152986357	152986357	G	A	SNP	BCAP31	NM_001139457.1	human	genbank	58_37c	-1	reviewed	missense	c.364	p.L122F	1.000	HMMPfam_Bap31	HMMPfam_Bap31	-	no_errors
BCAS2	0	genome.wustl.edu	37	1	115113352	115113352	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	115113352	115113352	C	G	SNP	BCAS2	NM_005872.2	human	genbank	58_37c	-1	validated	missense	c.439	p.E147Q	1.000	HMMPfam_BCAS2	HMMPfam_BCAS2	-	no_errors
BCL2L11	0	genome.wustl.edu	37	2	111907684	111907684	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	111907684	111907684	G	C	SNP	BCL2L11	NM_138621.3	human	genbank	58_37c	+1	reviewed	missense	c.458	p.R153P	1.000	HMMPfam_Bclx_interact	HMMPfam_Bim_N,HMMPfam_Bclx_interact	-	no_errors
BNC1	0	genome.wustl.edu	37	15	83931995	83931995	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	15	83931995	83931995	C	T	SNP	BNC1	NM_001717.3	human	genbank	58_37c	-1	reviewed	missense	c.2008	p.D670N	0.805	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
BOLA1	0	genome.wustl.edu	37	1	149871844	149871844	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	149871844	149871844	G	C	SNP	BOLA1	NM_016074.3	human	genbank	58_37c	+1	validated	missense	c.232	p.E78Q	0.998	HMMPfam_BolA,superfamily_BolA-like	HMMPfam_BolA,superfamily_BolA-like	-	no_errors
BTN3A3	0	genome.wustl.edu	37	6	26452288	26452288	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	6	26452288	26452288	G	C	SNP	BTN3A3	NM_006994.4	human	genbank	58_37c	+1	validated	missense	c.1404	p.E468D	0.990	HMMPfam_SPRY,HMMSmart_SPRY	HMMSmart_IG,HMMPfam_SPRY,HMMSmart_PRY,HMMPfam_V-set,HMMSmart_SPRY,superfamily_SSF48726	-	no_errors
C17orf39	0	genome.wustl.edu	37	17	17965159	17965159	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	17965159	17965159	G	A	SNP	C17orf39	NM_024052.4	human	genbank	58_37c	+1	validated	missense	c.709	p.E237K	1.000	HMMPfam_Vac_ImportDeg	HMMPfam_Vac_ImportDeg	-	no_errors
C2orf86	0	genome.wustl.edu	37	2	63631703	63631703	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	63631703	63631703	G	A	SNP	C2orf86	NM_015910.4	human	genbank	58_37c	-1	validated	silent	c.915	p.S305	0.929	NULL	NULL	-	no_errors
C3orf37	0	genome.wustl.edu	37	3	128998666	128998666	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	128998666	128998666	G	C	SNP	C3orf37	NM_001006109.1	human	genbank	58_37c	+1	validated	missense	c.91	p.E31Q	0.104	HMMPfam_DUF159	HMMPfam_DUF159	-	no_errors
C3orf37	0	genome.wustl.edu	37	3	129007811	129007811	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	129007811	129007811	G	A	SNP	C3orf37	NM_001006109.1	human	genbank	58_37c	+1	validated	missense	c.298	p.D100N	1.000	HMMPfam_DUF159	HMMPfam_DUF159	-	no_errors
C3orf63	0	genome.wustl.edu	37	3	56681156	56681156	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	56681156	56681156	G	A	SNP	C3orf63	NM_001112736.1	human	genbank	58_37c	-1	validated	nonsense	c.1609	p.Q537*	1.000	NULL	NULL	-	no_errors
C9orf29	0	genome.wustl.edu	37	9	114371402	114371402	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	114371402	114371402	G	C	SNP	C9orf29	ENST00000374306	human	ensembl	58_37c	-1	known	missense	c.206	p.S69C	0.043	NULL	NULL	-	no_errors
CABC1	0	genome.wustl.edu	37	1	227149179	227149179	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	227149179	227149179	C	T	SNP	CABC1	NM_020247.4	human	genbank	58_37c	+1	reviewed	silent	c.93	p.G31	0.471	NULL	HMMPfam_ABC1,superfamily_Protein kinase-like (PK-like)	-	no_errors
CALD1	0	genome.wustl.edu	37	7	134643006	134643006	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	7	134643006	134643006	G	C	SNP	CALD1	NM_033138.3	human	genbank	58_37c	+1	reviewed	missense	c.2026	p.D676H	1.000	HMMPfam_Caldesmon	HMMPfam_Caldesmon,PatternScan_PHOSPHOPANTETHEINE	-	no_errors
CATSPERB	0	genome.wustl.edu	37	14	92083994	92083994	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	14	92083994	92083994	C	T	SNP	CATSPERB	NM_024764.2	human	genbank	58_37c	-1	validated	missense	c.2347	p.D783N	0.269	NULL	NULL	-	no_errors
CCDC87	0	genome.wustl.edu	37	11	66360198	66360198	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	11	66360198	66360198	C	T	SNP	CCDC87	NM_018219.2	human	genbank	58_37c	-1	validated	missense	c.289	p.E97K	1.000	NULL	NULL	-	no_errors
CCS	0	genome.wustl.edu	37	11	66373005	66373005	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	11	66373005	66373005	G	T	SNP	CCS	NM_005125.1	human	genbank	58_37c	+1	reviewed	missense	c.613	p.D205Y	1.000	HMMPfam_Sod_Cu,superfamily_SOD_Cu_Zn	HMMPfam_Sod_Cu,superfamily_SOD_Cu_Zn,HMMPfam_HMA,superfamily_HeavyMe_transpt,PatternScan_HMA_1,PatternScan_SOD_CU_ZN_1,PatternScan_SOD_CU_ZN_2	-	no_errors
CCT4	0	genome.wustl.edu	37	2	62099221	62099221	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	62099221	62099221	C	T	SNP	CCT4	NM_006430.2	human	genbank	58_37c	-1	validated	missense	c.1487	p.R496Q	1.000	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase	PatternScan_TCP1_1,PatternScan_TCP1_2,PatternScan_TCP1_3,HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase,superfamily_SSF52029,superfamily_SSF54849	-	no_errors
CCT4	0	genome.wustl.edu	37	2	62107467	62107467	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	62107467	62107467	G	A	SNP	CCT4	NM_006430.2	human	genbank	58_37c	-1	validated	silent	c.333	p.I111	1.000	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase	PatternScan_TCP1_1,PatternScan_TCP1_2,PatternScan_TCP1_3,HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase,superfamily_SSF52029,superfamily_SSF54849	-	no_errors
CD3G	0	genome.wustl.edu	37	11	118220523	118220523	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	11	118220523	118220523	G	A	SNP	CD3G	NM_000073.2	human	genbank	58_37c	+1	reviewed	missense	c.145	p.E49K	0.000	HMMSmart_SM00408,superfamily_Immunoglobulin	HMMPfam_ITAM,HMMSmart_SM00077,HMMSmart_SM00408,superfamily_Immunoglobulin	-	no_errors
CDH16	0	genome.wustl.edu	37	16	66946466	66946466	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	66946466	66946466	C	A	SNP	CDH16	NM_004062.2	human	genbank	58_37c	-1	reviewed	nonsense	c.1300	p.E434*	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
CDRT1	0	genome.wustl.edu	37	17	15508621	15508621	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	15508621	15508621	C	T	SNP	CDRT1	NM_006382.3	human	genbank	58_37c	-1	provisional	missense	c.1349	p.R450Q	0.997	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,HMMPfam_F-box,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_F-box domain	-	no_errors
CHTF18	0	genome.wustl.edu	37	16	844160	844160	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	844160	844160	C	A	SNP	CHTF18	NM_022092.2	human	genbank	58_37c	+1	validated	missense	c.1909	p.H637N	0.995	NULL	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CLIP1	0	genome.wustl.edu	37	12	122825432	122825432	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	122825432	122825432	G	C	SNP	CLIP1	NM_002956.2	human	genbank	58_37c	-1	validated	silent	c.2286	p.L762	0.925	NULL	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_Cap-Gly domain	-	no_errors
CNST	0	genome.wustl.edu	37	1	246810526	246810526	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	246810526	246810526	G	C	SNP	CNST	NM_152609.2	human	genbank	58_37c	+1	validated	missense	c.1023	p.Q341H	0.000	NULL	NULL	-	no_errors
CNTN5	0	genome.wustl.edu	37	11	100061971	100061971	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	11	100061971	100061971	C	T	SNP	CNTN5	NM_014361.2	human	genbank	58_37c	+1	reviewed	missense	c.1694	p.S565L	0.916	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
CWC25	0	genome.wustl.edu	37	17	36966009	36966009	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	36966009	36966009	C	A	SNP	CWC25	NM_017748.3	human	genbank	58_37c	-1	provisional	missense	c.636	p.K212N	1.000	NULL	HMMPfam_Cir_N	-	no_errors
CYP2A13	0	genome.wustl.edu	37	19	41595962	41595962	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	41595962	41595962	C	T	SNP	CYP2A13	NM_000766.3	human	genbank	58_37c	+1	reviewed	silent	c.354	p.F118	0.983	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
CYP2A7	0	genome.wustl.edu	37	19	41388071	41388071	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	41388071	41388071	C	T	SNP	CYP2A7	NM_000764.2	human	genbank	58_37c	-1	reviewed	silent	c.45	p.L15	0.010	NULL	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
CYP2E1	0	genome.wustl.edu	37	10	135340993	135340993	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	10	135340993	135340993	C	G	SNP	CYP2E1	NM_000773.3	human	genbank	58_37c	+1	reviewed	missense	c.94	p.L32V	0.875	NULL	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DDR1	0	genome.wustl.edu	37	6	30864588	30864588	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	6	30864588	30864588	C	T	SNP	DDR1	ENST00000514434	human	ensembl	58_37c	+1	known	missense	c.289	p.P97S	1.000	NULL	HMMPfam_Pkinase_Tyr	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
DDR2	0	genome.wustl.edu	37	1	162729640	162729640	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	162729640	162729640	C	T	SNP	DDR2	NM_001014796.1	human	genbank	58_37c	+1	reviewed	silent	c.726	p.F242	1.000	NULL	HMMPfam_F5_F8_type_C,HMMSmart_FA58C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_II,PatternScan_PROTEIN_KINASE_TYR,superfamily_Gal_bind_like,superfamily_Kinase_like	-	no_errors
DEPDC4	0	genome.wustl.edu	37	12	100657603	100657603	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	100657603	100657603	C	G	SNP	DEPDC4	NM_152317.2	human	genbank	58_37c	-1	provisional	missense	c.226	p.E76Q	1.000	"HMMPfam_DEP,HMMSmart_SM00049,superfamily_""Winged helix"" DNA-binding domain"	"HMMPfam_DEP,HMMSmart_SM00049,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
DPF2	0	genome.wustl.edu	37	11	65113788	65113788	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	11	65113788	65113788	C	T	SNP	DPF2	NM_006268.3	human	genbank	58_37c	+1	reviewed	silent	c.975	p.I325	1.000	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD	HMMSmart_SM00249,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00355,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
DRG2	0	genome.wustl.edu	37	17	17997277	17997277	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	17997277	17997277	C	G	SNP	DRG2	NM_001388.3	human	genbank	58_37c	+1	reviewed	missense	c.215	p.S72C	1.000	HMMPfam_MMR_HSR1,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_MMR_HSR1,HMMPfam_TGS,PatternScan_GTP1_OBG,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DSE	0	genome.wustl.edu	37	6	116757740	116757740	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	6	116757740	116757740	C	A	SNP	DSE	NM_001080976.1	human	genbank	58_37c	+1	reviewed	silent	c.2109	p.A703	0.000	NULL	NULL	-	no_errors
ECM2	0	genome.wustl.edu	37	9	95277329	95277329	+	Missense_Mutation	SNP	G	G	A	rs13291847	byCluster	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	95277329	95277329	G	A	SNP	ECM2	NM_001393.2	human	genbank	58_37c	-1	reviewed	missense	c.638	p.S213F	0.013	NULL	HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_LRR_1,superfamily_SSF52058	-	no_errors
ENSG00000196585	0	genome.wustl.edu	37	16	28425276	28425276	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	28425276	28425276	G	A	SNP	ENSG00000196585	ENST00000357646	human	ensembl	58_37c	+1	known	missense	c.253	p.E85K	1.000	HMMPfam_CDC37_N	HMMPfam_CDC37_N,HMMPfam_CDC37_C	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	2796	2796	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	MT	2796	2796	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000249845	0	genome.wustl.edu	37	17	75558636	75558636	+	RNA	SNP	C	C	T	rs185864529	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	75558636	75558636	C	T	SNP	ENSG00000249845	ENST00000510484	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.118	-	-	-	no_errors
EPHX3	0	genome.wustl.edu	37	19	15338655	15338655	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	15338655	15338655	C	T	SNP	EPHX3	NM_001142886.1	human	genbank	58_37c	-1	validated	missense	c.784	p.E262K	0.994	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases	-	no_errors
ERI3	0	genome.wustl.edu	37	1	44820585	44820585	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	44820585	44820585	C	T	SNP	ERI3	NM_024066.1	human	genbank	58_37c	-1	validated	silent	c.114	p.P38	1.000	NULL	HMMSmart_SM00479,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T	-	no_errors
FAM115C	0	genome.wustl.edu	37	7	143417083	143417083	+	Missense_Mutation	SNP	T	T	C	rs144677924	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	7	143417083	143417083	T	C	SNP	FAM115C	NM_001130025.1	human	genbank	58_37c	+1	validated	missense	c.931	p.C311R	0.002	NULL	NULL	-	no_errors
FAM171B	0	genome.wustl.edu	37	2	187559029	187559030	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	187559029	187559030	-	CAG	INS	FAM171B	NM_177454.3	human	genbank	58_37c	+1	validated	in_frame_ins	c.129_130	p.47in_frame_insQ	0.998:1.000	NULL	HMMPfam_UPF0560	-	no_errors
FAM179A	0	genome.wustl.edu	37	2	29246027	29246027	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	29246027	29246027	G	A	SNP	FAM179A	NM_199280.2	human	genbank	58_37c	+1	validated	silent	c.1587	p.L529	0.999	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
FANCA	0	genome.wustl.edu	37	16	89882319	89882319	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	89882319	89882319	C	A	SNP	FANCA	NM_000135.2	human	genbank	58_37c	-1	reviewed	missense	c.155	p.R52L	0.488	NULL	HMMPfam_Fanconi_A	-	no_errors
FCRL3	0	genome.wustl.edu	37	1	157660235	157660235	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	157660235	157660235	C	G	SNP	FCRL3	NM_052939.3	human	genbank	58_37c	-1	reviewed	silent	c.1500	p.L500	0.005	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	PatternScan_N6_MTASE,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
FREM1	0	genome.wustl.edu	37	9	14776228	14776228	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	14776228	14776228	C	T	SNP	FREM1	ENST00000380894	human	ensembl	58_37c	-1	known	silent	c.24	p.L8	1.000	NULL	HMMPfam_Lectin_C,HMMSmart_CLECT,superfamily_C-type_lectin_fold,PatternScan_SPASE_I_1	-	no_errors
FRG1	0	genome.wustl.edu	37	4	190878562	190878562	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	4	190878562	190878562	G	C	SNP	FRG1	NM_004477.2	human	genbank	58_37c	+1	reviewed	missense	c.442	p.A148P	1.000	superfamily_Actin-crosslinking proteins,HMMPfam_FRG1	PatternScan_LIPOCALIN,superfamily_Actin-crosslinking proteins,HMMPfam_FRG1	-	no_errors
FRG1B	0	genome.wustl.edu	37	20	29628236	29628236	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	29628236	29628236	G	C	SNP	FRG1B	ENST00000278882	human	ensembl	58_37c	+1	known	missense	c.238	p.A80P	1.000	superfamily_Actin_crosslink,HMMPfam_FRG1	superfamily_Actin_crosslink,HMMPfam_FRG1	-	no_errors
FUK	0	genome.wustl.edu	37	16	70513502	70513502	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	70513502	70513502	C	T	SNP	FUK	NM_145059.2	human	genbank	58_37c	+1	reviewed	silent	c.3174	p.I1058	1.000	superfamily_GHMP Kinase C-terminal domain	HMMPfam_GHMP_kinases_N,HMMPfam_Fucokinase,HMMPfam_GHMP_kinases_C,superfamily_Ribosomal protein S5 domain 2-like,superfamily_GHMP Kinase C-terminal domain	-	no_errors
GALNT8	0	genome.wustl.edu	37	12	4853841	4853841	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	4853841	4853841	G	T	SNP	GALNT8	NM_017417.1	human	genbank	58_37c	+1	reviewed	missense	c.835	p.A279S	1.000	HMMPfam_Glycos_transf_2,superfamily_SSF53448	HMMPfam_Ricin_B_lectin,HMMSmart_RICIN,HMMPfam_Glycos_transf_2,superfamily_RicinB_like,superfamily_SSF53448	-	no_errors
GBP4	0	genome.wustl.edu	37	1	89651146	89651146	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	89651146	89651146	C	T	SNP	GBP4	NM_052941.4	human	genbank	58_37c	-1	validated	missense	c.1714	p.E572K	0.000	HMMPfam_GBP_C,superfamily_GBP	HMMPfam_GBP_C,HMMPfam_GBP,superfamily_GBP,superfamily_SSF52540	-	no_errors
GGT1	0	genome.wustl.edu	37	22	25023394	25023394	+	Silent	SNP	G	G	A	rs41522645	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	22	25023394	25023394	G	A	SNP	GGT1	ENST00000417817	human	ensembl	58_37c	+1	known	silent	c.1038	p.S346	0.722	NULL	HMMPfam_G_glu_transpept	-	no_errors
GLT25D2	0	genome.wustl.edu	37	1	183920242	183920242	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	183920242	183920242	G	A	SNP	GLT25D2	NM_015101.2	human	genbank	58_37c	-1	validated	silent	c.1035	p.F345	1.000	HMMPfam_Glyco_transf_25	PatternScan_ER_TARGET,HMMPfam_Glyco_transf_25	-	no_errors
GPR149	0	genome.wustl.edu	37	3	154055753	154055753	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	154055753	154055753	G	C	SNP	GPR149	NM_001038705.1	human	genbank	58_37c	-1	provisional	missense	c.1931	p.S644C	1.000	NULL	NULL	-	no_errors
GPR39	0	genome.wustl.edu	37	2	133402996	133402996	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	133402996	133402996	C	G	SNP	GPR39	NM_001508.2	human	genbank	58_37c	+1	validated	silent	c.1179	p.L393	0.925	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
GPR98	0	genome.wustl.edu	37	5	89981683	89981683	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	5	89981683	89981683	C	T	SNP	GPR98	NM_032119.3	human	genbank	58_37c	+1	reviewed	nonsense	c.6361	p.Q2121*	1.000	HMMPfam_Calx-beta,HMMSmart_SM00237	HMMPfam_GPS,PatternScan_LIPOYL,HMMPfam_Calx-beta,HMMSmart_SM00237,HMMPfam_EPTP,PatternScan_A_DEAMINASE,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
GRB7	0	genome.wustl.edu	37	17	37899229	37899229	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	37899229	37899229	G	C	SNP	GRB7	NM_001030002.1	human	genbank	58_37c	+1	reviewed	missense	c.385	p.E129Q	1.000	HMMPfam_RA,HMMSmart_SM00314	HMMPfam_RA,HMMSmart_SM00314,HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_BPS,superfamily_PH domain-like,superfamily_SH2 domain	-	no_errors
GRHL3	0	genome.wustl.edu	37	1	24669202	24669202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	24669202	24669202	C	T	SNP	GRHL3	NM_021180.2	human	genbank	58_37c	+1	reviewed	missense	c.1240	p.R414C	1.000	HMMPfam_CP2	HMMPfam_CP2	-	no_errors
GRIN2A	0	genome.wustl.edu	37	16	9934583	9934583	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	9934583	9934583	G	C	SNP	GRIN2A	NM_000833.3	human	genbank	58_37c	-1	reviewed	missense	c.1572	p.F524L	1.000	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II	HMMPfam_Lig_chan,HMMSmart_SM00079,HMMPfam_ANF_receptor,HMMPfam_NMDAR2_C,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like I,superfamily_Periplasmic binding protein-like II	-	no_errors
GRIN2B	0	genome.wustl.edu	37	12	13716151	13716151	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	13716151	13716151	C	G	SNP	GRIN2B	NM_000834.3	human	genbank	58_37c	-1	reviewed	missense	c.4021	p.E1341Q	1.000	HMMPfam_NMDAR2_C	HMMPfam_Lig_chan,HMMSmart_PBPe,HMMPfam_NMDAR2_C,HMMPfam_Lig_chan-Glu_bd,superfamily_SSF53822,superfamily_SSF53850	-	no_errors
GTF2IRD2B	0	genome.wustl.edu	37	7	74564242	74564242	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	7	74564242	74564242	G	C	SNP	GTF2IRD2B	NM_001003795.2	human	genbank	58_37c	+1	reviewed	missense	c.1989	p.Q663H	0.263	NULL	HMMPfam_GTF2I	-	no_errors
HEATR5B	0	genome.wustl.edu	37	2	37284541	37284541	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	37284541	37284541	G	A	SNP	HEATR5B	NM_019024.1	human	genbank	58_37c	-1	validated	silent	c.2142	p.L714	1.000	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
HERC1	0	genome.wustl.edu	37	15	63958297	63958297	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	15	63958297	63958297	C	T	SNP	HERC1	NM_003922.3	human	genbank	58_37c	-1	reviewed	missense	c.8376	p.M2792I	1.000	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00320,HMMPfam_SPRY,PatternScan_ARGINASE_2,PatternScan_PHOSPHOPANTETHEINE,superfamily_RCC1/BLIP-II,superfamily_WD40 repeat-like,HMMSmart_SM00449,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
HES4	0	genome.wustl.edu	37	1	934931	934931	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	934931	934931	C	G	SNP	HES4	NM_001142467.1	human	genbank	58_37c	-1	validated	silent	c.345	p.R115	1.000	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain	HMMPfam_HLH,HMMSmart_SM00353,HMMPfam_Hairy_orange,superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00511	-	no_errors
HIATL2	0	genome.wustl.edu	37	9	99721158	99721158	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	99721158	99721158	G	C	SNP	HIATL2	ENST00000375223	human	ensembl	58_37c	-1	known	missense	c.226	p.Q76E	1.000	superfamily_MFS_gen_substrate_transporter	PatternScan_SUGAR_TRANSPORT_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
HIST1H2AM	0	genome.wustl.edu	37	6	27860646	27860646	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	6	27860646	27860646	G	A	SNP	HIST1H2AM	NM_003514.2	human	genbank	58_37c	-1	reviewed	silent	c.282	p.L94	1.000	HMMSmart_SM00414,superfamily_Histone-fold	HMMSmart_SM00414,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HMGB3	0	genome.wustl.edu	37	X	150156319	150156319	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	X	150156319	150156319	A	T	SNP	HMGB3	NM_005342.2	human	genbank	58_37c	+1	validated	nonsense	c.535	p.K179*	1.000	NULL	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box,PatternScan_HMG_BOX_1	-	no_errors
HMGXB4	0	genome.wustl.edu	37	22	35661391	35661391	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	22	35661391	35661391	A	G	SNP	HMGXB4	NM_001003681.2	human	genbank	58_37c	+1	validated	missense	c.1010	p.K337R	0.766	NULL	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box	-	no_errors
HOXA6	0	genome.wustl.edu	37	7	27185451	27185451	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	7	27185451	27185451	G	C	SNP	HOXA6	NM_024014.2	human	genbank	58_37c	-1	reviewed	missense	c.528	p.F176L	1.000	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,PatternScan_ANTENNAPEDIA,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
HTR1A	0	genome.wustl.edu	37	5	63256550	63256550	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	5	63256550	63256550	G	A	SNP	HTR1A	NM_000524.2	human	genbank	58_37c	-1	validated	missense	c.997	p.R333C	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
HTT	0	genome.wustl.edu	37	4	3179079	3179079	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	4	3179079	3179079	G	A	SNP	HTT	NM_002111.6	human	genbank	58_37c	+1	reviewed	silent	c.4428	p.L1476	1.000	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
IFT140	0	genome.wustl.edu	37	16	1570261	1570261	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	1570261	1570261	G	A	SNP	IFT140	NM_014714.3	human	genbank	58_37c	-1	validated	silent	c.3744	p.I1248	1.000	superfamily_TPR-like	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMPfam_WD40,superfamily_TPR-like	-	no_errors
IGKV3-15	0	genome.wustl.edu	37	2	89384739	89384739	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	89384739	89384739	G	C	SNP	IGKV3-15	ENST00000390252	human	ensembl	58_37c	-1	known	silent	c.279	p.L93	0.965	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon
INF2	0	genome.wustl.edu	37	14	105175628	105175628	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	14	105175628	105175628	G	A	SNP	INF2	NM_022489.3	human	genbank	58_37c	+1	validated	missense	c.1960	p.E654K	1.000	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)	HMMSmart_SM00498,HMMPfam_WH2,HMMPfam_Drf_FH3,HMMPfam_Drf_GBD,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain),PatternScan_ALKALINE_PHOSPHATASE	-	no_errors
INHBB	0	genome.wustl.edu	37	2	121106995	121106995	+	Missense_Mutation	SNP	G	G	A	rs148176831	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	121106995	121106995	G	A	SNP	INHBB	NM_002193.2	human	genbank	58_37c	+1	reviewed	missense	c.769	p.E257K	1.000	HMMPfam_TGFb_propeptide	HMMPfam_TGFb_propeptide,HMMPfam_TGF_beta,HMMSmart_SM00204,PatternScan_TGF_BETA_1,superfamily_Cystine-knot cytokines	-	no_errors
JAG1	0	genome.wustl.edu	37	20	10639266	10639266	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	10639266	10639266	G	A	SNP	JAG1	NM_000214.2	human	genbank	58_37c	-1	reviewed	nonsense	c.544	p.Q182*	1.000	HMMPfam_DSL,HMMSmart_DSL	PatternScan_ASX_HYDROXYL,HMMSmart_VWC,HMMPfam_DSL,HMMSmart_DSL,HMMSmart_EGF_CA,HMMPfam_EGF,HMMSmart_EGF,HMMPfam_MNNL,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,superfamily_SSF57196	-	no_errors
JAK3	0	genome.wustl.edu	37	19	17949174	17949174	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	17949174	17949174	C	G	SNP	JAK3	NM_000215.3	human	genbank	58_37c	-1	reviewed	missense	c.1467	p.Q489H	0.985	superfamily_SH2 domain	PatternScan_THIOL_PROTEASE_HIS,HMMSmart_SM00252,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMSmart_SM00295,superfamily_SH2 domain	-	no_errors
KIAA0913	0	genome.wustl.edu	37	10	75557294	75557294	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	10	75557294	75557294	C	T	SNP	KIAA0913	NM_015037.2	human	genbank	58_37c	+1	validated	missense	c.3593	p.S1198L	1.000	NULL	HMMPfam_SWIM	-	no_errors
KIF13A	0	genome.wustl.edu	37	6	17773736	17773736	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	6	17773736	17773736	T	C	SNP	KIF13A	NM_022113.4	human	genbank	58_37c	-1	validated	missense	c.4297	p.R1433G	1.000	NULL	HMMPfam_FHA,HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_SMAD/FHA domain,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KLK10	0	genome.wustl.edu	37	19	51518205	51518205	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	51518205	51518205	C	T	SNP	KLK10	NM_001077500.1	human	genbank	58_37c	-1	reviewed	missense	c.682	p.D228N	1.000	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS	-	no_errors
KRT19	0	genome.wustl.edu	37	17	39680718	39680718	+	Silent	SNP	G	G	A	rs148175649	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	39680718	39680718	G	A	SNP	KRT19	NM_002276.4	human	genbank	58_37c	-1	reviewed	silent	c.735	p.L245	0.570	superfamily_Prefoldin,HMMPfam_Filament	superfamily_Prefoldin,HMMPfam_Filament,PatternScan_IF	-	no_errors
KRTAP10-4	0	genome.wustl.edu	37	21	45994492	45994492	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	21	45994492	45994492	C	G	SNP	KRTAP10-4	NM_198687.1	human	genbank	58_37c	+1	reviewed	missense	c.857	p.S286C	0.000	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors
KRTAP9-9	0	genome.wustl.edu	37	17	39411670	39411671	+	In_Frame_Ins	INS	-	-	ACCTGCTGCAGGACC	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	39411670	39411671	-	ACCTGCTGCAGGACC	INS	KRTAP9-9	NM_030975.2	human	genbank	58_37c	+1	reviewed	in_frame_ins	c.33_34	p.15in_frame_insTTCCR	0.053:0.940	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors
LHX9	0	genome.wustl.edu	37	1	197898203	197898203	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	197898203	197898203	A	G	SNP	LHX9	NM_020204.2	human	genbank	58_37c	+1	reviewed	silent	c.1008	p.K336	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
LILRB5	0	genome.wustl.edu	37	19	54760586	54760586	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	54760586	54760586	G	A	SNP	LILRB5	NM_001081442.1	human	genbank	58_37c	-1	reviewed	missense	c.121	p.R41W	0.000	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
LOC100129942	0	genome.wustl.edu	37	15	89533028	89533028	+	RNA	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	15	89533028	89533028	G	C	SNP	LOC100129942	XR_038237.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC100131165	0	genome.wustl.edu	37	19	619185	619185	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	619185	619185	C	T	SNP	LOC100131165	XM_001719174.1	human	genbank	58_37c	-1	model	missense	c.31	p.G11S	0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
LOC100288659	0	genome.wustl.edu	37	8	94658396	94658396	+	RNA	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	8	94658396	94658396	G	C	SNP	LOC100288659	XR_078392.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.996	-	-	-	pseudogene
LOC392335	0	genome.wustl.edu	37	9	66513513	66513513	+	RNA	SNP	C	C	A	rs4400485	byHapMap	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	66513513	66513513	C	A	SNP	LOC392335	XR_037043.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC728888	0	genome.wustl.edu	37	16	29394331	29394331	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	29394331	29394331	G	A	SNP	LOC728888	XM_002343430.1	human	genbank	58_37c	-1	model	missense	c.1922	p.S641L	0.058	NULL	HMMPfam_NPIP	-	no_errors
LOC91316	0	genome.wustl.edu	37	22	23980988	23980988	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	22	23980988	23980988	G	A	SNP	LOC91316	NR_024448.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.283	-	-	-	pseudogene
LRTOMT	0	genome.wustl.edu	37	11	71819713	71819713	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	11	71819713	71819713	G	A	SNP	LRTOMT	NM_001145308.1	human	genbank	58_37c	+1	validated	silent	c.618	p.L206	0.630	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_Methyltransf_3,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
LY75	0	genome.wustl.edu	37	2	160667156	160667156	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	160667156	160667156	G	C	SNP	LY75	NM_002349.2	human	genbank	58_37c	-1	validated	nonsense	c.4580	p.S1527*	0.995	NULL	HMMPfam_fn2,HMMSmart_SM00059,PatternScan_FN2_1,HMMSmart_SM00458,HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_Ricin B-like lectins,superfamily_Kringle-like,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_errors
MACF1	0	genome.wustl.edu	37	1	39824490	39824490	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	39824490	39824490	C	G	SNP	MACF1	NM_033044.2	human	genbank	58_37c	+1	reviewed	nonsense	c.7385	p.S2462*	1.000	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin	HMMPfam_Plectin,HMMSmart_PLEC,HMMPfam_Spectrin,HMMSmart_EFh,HMMPfam_GAS2,HMMSmart_GAS2,PatternScan_GLYCOSYL_HYDROL_F5,HMMSmart_SPEC,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Spectrin,superfamily_SSF47473,superfamily_SSF75399	-	no_errors
MAGEA3	0	genome.wustl.edu	37	X	151935227	151935227	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	X	151935227	151935227	C	T	SNP	MAGEA3	NM_005362.3	human	genbank	58_37c	-1	reviewed	missense	c.940	p.E314K	0.038	NULL	HMMPfam_MAGE	-	no_errors
MAPK4	0	genome.wustl.edu	37	18	48255621	48255621	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	18	48255621	48255621	G	A	SNP	MAPK4	NM_002747.3	human	genbank	58_37c	+1	reviewed	silent	c.1161	p.A387	0.047	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MARCH7	0	genome.wustl.edu	37	2	160619400	160619400	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	160619400	160619400	G	C	SNP	MARCH7	NM_022826.2	human	genbank	58_37c	+1	validated	missense	c.1903	p.E635Q	1.000	NULL	HMMSmart_RINGv,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
MARVELD2	0	genome.wustl.edu	37	5	68728835	68728835	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	5	68728835	68728835	C	G	SNP	MARVELD2	NM_001038603.2	human	genbank	58_37c	+1	validated	missense	c.1418	p.S473C	1.000	HMMPfam_Occludin_ELL	HMMPfam_MARVEL,HMMPfam_Occludin_ELL	-	no_errors
MASP1	0	genome.wustl.edu	37	3	187009524	187009524	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	187009524	187009524	C	T	SNP	MASP1	ENST00000439271	human	ensembl	58_37c	-1	known	silent	c.36	p.Q12	1.000	NULL	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	-	no_stop_codon:bad_bp_length_for_coding_region
MAST4	0	genome.wustl.edu	37	5	66398395	66398395	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	5	66398395	66398395	G	A	SNP	MAST4	NM_015183.2	human	genbank	58_37c	+1	validated	missense	c.535	p.E179K	1.000	HMMPfam_DUF1908	HMMSmart_S_TK_X,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DUF1908,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
MCOLN3	0	genome.wustl.edu	37	1	85506704	85506704	+	Missense_Mutation	SNP	C	C	G	rs142799067	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	85506704	85506704	C	G	SNP	MCOLN3	NM_018298.9	human	genbank	58_37c	-1	validated	missense	c.385	p.A129P	0.997	NULL	HMMPfam_Ion_trans	-	no_errors
MED27	0	genome.wustl.edu	37	9	134736049	134736049	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	134736049	134736049	C	A	SNP	MED27	NM_004269.2	human	genbank	58_37c	-1	reviewed	missense	c.812	p.R271I	1.000	NULL	NULL	-	no_errors
MEIS3P1	0	genome.wustl.edu	37	17	15690520	15690521	+	RNA	DEL	AC	AC	-	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	15690520	15690521	AC	-	DEL	MEIS3P1	NR_002211.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.909:0.919	-	-	-	pseudogene
MSH2	0	genome.wustl.edu	37	2	47693816	47693816	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	47693816	47693816	G	C	SNP	MSH2	NM_000251.1	human	genbank	58_37c	+1	reviewed	missense	c.1530	p.Q510H	1.000	HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII,HMMPfam_MutS_IV	HMMPfam_MutS_V,HMMSmart_MUTSac,PatternScan_DNA_MISMATCH_REPAIR_2,HMMPfam_MutS_I,HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII,HMMPfam_MutS_II,HMMPfam_MutS_IV,superfamily_SSF52540	-	no_errors
MUC16	0	genome.wustl.edu	37	19	8976844	8976844	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	8976844	8976844	C	T	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	silent	c.42222	p.L14074	0.022	HMMPfam_SEA,superfamily_SEA domain	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
MYH7B	0	genome.wustl.edu	37	20	33586315	33586315	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	33586315	33586315	G	A	SNP	MYH7B	NM_020884.3	human	genbank	58_37c	+1	reviewed	silent	c.4002	p.G1334	0.983	HMMPfam_Myosin_tail_1,superfamily_Prefoldin	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Prefoldin,superfamily_tRNA-binding arm,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NIN	0	genome.wustl.edu	37	14	51219447	51219447	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	14	51219447	51219447	G	A	SNP	NIN	NM_020921.3	human	genbank	58_37c	-1	reviewed	missense	c.4739	p.S1580L	1.000	NULL	HMMPfam_efhand,superfamily_EF-hand	-	no_errors
NIN	0	genome.wustl.edu	37	14	51233599	51233599	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	14	51233599	51233599	G	T	SNP	NIN	NM_020921.3	human	genbank	58_37c	-1	reviewed	missense	c.1444	p.R482S	1.000	NULL	HMMPfam_efhand,superfamily_EF-hand	-	no_errors
NINL	0	genome.wustl.edu	37	20	25436389	25436389	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	25436389	25436389	C	T	SNP	NINL	NM_025176.4	human	genbank	58_37c	-1	validated	missense	c.3877	p.E1293K	0.306	NULL	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
NINL	0	genome.wustl.edu	37	20	25443172	25443172	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	25443172	25443172	C	T	SNP	NINL	ENST00000336104	human	ensembl	58_37c	-1	known	missense	c.286	p.E96K	0.996	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
NSMCE1	0	genome.wustl.edu	37	16	27238062	27238062	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	27238062	27238062	G	A	SNP	NSMCE1	NM_145080.3	human	genbank	58_37c	-1	validated	silent	c.579	p.I193	1.000	HMMPfam_zf-RING-like,superfamily_SSF57850	HMMPfam_SMC_Nse1,HMMPfam_zf-RING-like,superfamily_SSF57850	-	no_errors
NUDT17	0	genome.wustl.edu	37	1	145588435	145588435	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	145588435	145588435	C	T	SNP	NUDT17	ENST00000444015	human	ensembl	58_37c	-1	known	missense	c.118	p.E40K	0.508	HMMPfam_NUDIX,superfamily_Nudix	HMMPfam_NUDIX,superfamily_Nudix	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
NWD1	0	genome.wustl.edu	37	19	16860225	16860225	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	16860225	16860225	C	G	SNP	NWD1	NM_001007525.2	human	genbank	58_37c	+1	validated	missense	c.367	p.H123D	0.997	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
OR2A4	0	genome.wustl.edu	37	6	132022419	132022419	+	Silent	SNP	G	G	A	rs9483324	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	6	132022419	132022419	G	A	SNP	OR2A4	NM_030908.1	human	genbank	58_37c	-1	provisional	silent	c.123	p.N41	0.140	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5H14	0	genome.wustl.edu	37	3	97868793	97868793	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	97868793	97868793	T	C	SNP	OR5H14	NM_001005514.1	human	genbank	58_37c	+1	provisional	silent	c.564	p.S188	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PAPLN	0	genome.wustl.edu	37	14	73729310	73729310	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	14	73729310	73729310	C	A	SNP	PAPLN	NM_173462.3	human	genbank	58_37c	+1	validated	missense	c.2417	p.A806E	0.004	NULL	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1,HMMPfam_Kunitz_BPTI,HMMSmart_KU,PatternScan_BPTI_KUNITZ_1,superfamily_Prot_inh_Kunz-m,HMMSmart_IGc2,HMMPfam_ADAM_spacer1,HMMPfam_PLAC,HMMPfam_I-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
PARD6B	0	genome.wustl.edu	37	20	49366546	49366546	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	49366546	49366546	G	A	SNP	PARD6B	NM_032521.2	human	genbank	58_37c	+1	reviewed	missense	c.640	p.E214K	1.000	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ	HMMPfam_PB1,HMMSmart_PB1,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ	-	no_errors
PARP8	0	genome.wustl.edu	37	5	50090091	50090091	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	5	50090091	50090091	C	G	SNP	PARP8	NM_024615.3	human	genbank	58_37c	+1	validated	missense	c.788	p.S263C	1.000	NULL	HMMPfam_PARP,superfamily_ADP-ribosylation	-	no_errors
PBRM1	0	genome.wustl.edu	37	3	52584783	52584783	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	52584783	52584783	C	G	SNP	PBRM1	NM_018165.4	human	genbank	58_37c	-1	validated	missense	c.4399	p.G1467R	1.000	NULL	HMMPfam_HMG_box,HMMSmart_HMG,HMMPfam_BAH,HMMSmart_BAH,HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,superfamily_HMG-box,PatternScan_BROMODOMAIN_1	-	no_errors
PDCD11	0	genome.wustl.edu	37	10	105176260	105176260	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	10	105176260	105176260	G	C	SNP	PDCD11	NM_014976.1	human	genbank	58_37c	+1	validated	missense	c.1531	p.D511H	1.000	HMMPfam_S1,superfamily_Nucleic_acid_OB,HMMSmart_S1	HMMPfam_S1,HMMSmart_HAT,superfamily_Nucleic_acid_OB,HMMSmart_S1,superfamily_SSF48452	-	no_errors
PIKFYVE	0	genome.wustl.edu	37	2	209190674	209190674	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	209190674	209190674	C	G	SNP	PIKFYVE	NM_015040.3	human	genbank	58_37c	+1	reviewed	missense	c.3139	p.Q1047E	1.000	NULL	"HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_DEP,HMMSmart_SM00049,HMMPfam_Cpn60_TCP1,HMMPfam_PIP5K,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00330,superfamily_""Winged helix"" DNA-binding domain,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like,superfamily_SAICAR synthase-like"	-	no_errors
PLBD1	0	genome.wustl.edu	37	12	14688722	14688722	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	14688722	14688722	C	T	SNP	PLBD1	NM_024829.5	human	genbank	58_37c	-1	validated	missense	c.715	p.E239K	1.000	HMMPfam_Phospholip_B	HMMPfam_Phospholip_B	-	no_errors
PPFIA4	0	genome.wustl.edu	37	1	203023240	203023241	+	Frame_Shift_Ins	INS	-	-	GC	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	203023240	203023241	-	GC	INS	PPFIA4	ENST00000447715	human	ensembl	58_37c	+1	known	frame_shift_ins	c.1752_1753	p.P584fs	0.005:0.000	NULL	HMMPfam_SAM_1,HMMSmart_SAM,superfamily_SAM_homology,HMMPfam_SAM_2	-	no_errors
PSG4	0	genome.wustl.edu	37	19	43699148	43699148	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	43699148	43699148	G	A	SNP	PSG4	NM_002780.3	human	genbank	58_37c	-1	validated	silent	c.987	p.L329	0.476	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
PTPRZ1	0	genome.wustl.edu	37	7	121650745	121650745	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	7	121650745	121650745	C	G	SNP	PTPRZ1	NM_002851.2	human	genbank	58_37c	+1	reviewed	missense	c.1645	p.P549A	0.079	NULL	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
PYGL	0	genome.wustl.edu	37	14	51376618	51376618	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	14	51376618	51376618	C	G	SNP	PYGL	NM_002863.4	human	genbank	58_37c	-1	reviewed	missense	c.2172	p.K724N	1.000	HMMPfam_Phosphorylase,superfamily_SSF53756	HMMPfam_Phosphorylase,PatternScan_PHOSPHORYLASE,superfamily_SSF53756	-	no_errors
RAB11FIP4	0	genome.wustl.edu	37	17	29761087	29761087	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	29761087	29761087	G	C	SNP	RAB11FIP4	NM_032932.3	human	genbank	58_37c	+1	validated	missense	c.283	p.E95Q	0.995	NULL	HMMPfam_RBD-FIP,superfamily_EF-hand	-	no_errors
RBAK	0	genome.wustl.edu	37	7	5103430	5103430	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	7	5103430	5103430	G	C	SNP	RBAK	NM_021163.3	human	genbank	58_37c	+1	reviewed	missense	c.343	p.E115Q	0.115	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
RFWD3	0	genome.wustl.edu	37	16	74670451	74670451	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	74670451	74670451	G	C	SNP	RFWD3	NM_018124.3	human	genbank	58_37c	-1	validated	missense	c.1219	p.Q407E	0.014	NULL	HMMSmart_WD40,HMMSmart_RING,superfamily_WD40_like,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_SSF57850	-	no_errors
RNU2-2	0	genome.wustl.edu	37	11	62609220	62609220	+	RNA	SNP	A	A	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	11	62609220	62609220	A	G	SNP	RNU2-2	NR_002761.2	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	1.000	-	-	-	no_errors
SCN8A	0	genome.wustl.edu	37	12	52082602	52082602	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	52082602	52082602	G	A	SNP	SCN8A	NM_014191.2	human	genbank	58_37c	+1	reviewed	silent	c.675	p.L225	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_IQ,HMMSmart_SM00015,PatternScan_ODR_DC_2_1,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SDR42E1	0	genome.wustl.edu	37	16	82033756	82033756	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	82033756	82033756	G	T	SNP	SDR42E1	NM_145168.2	human	genbank	58_37c	-1	validated	missense	c.142	p.P48T	1.000	HMMPfam_3Beta_HSD,superfamily_NAD(P)-bd	HMMPfam_3Beta_HSD,superfamily_NAD(P)-bd	-	no_errors
SETD1A	0	genome.wustl.edu	37	16	30976309	30976309	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	30976309	30976309	G	A	SNP	SETD1A	NM_014712.1	human	genbank	58_37c	+1	provisional	missense	c.1246	p.E416K	0.822	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SET,HMMSmart_SET,HMMSmart_PostSET,superfamily_SSF54928,superfamily_SSF82199	-	no_errors
SIGLEC6	0	genome.wustl.edu	37	19	52032988	52032988	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	52032988	52032988	G	T	SNP	SIGLEC6	NM_001245.5	human	genbank	58_37c	-1	validated	silent	c.1002	p.L334	0.055	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	PatternScan_IG_MHC,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
SLC2A10	0	genome.wustl.edu	37	20	45354882	45354882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	45354882	45354882	C	T	SNP	SLC2A10	NM_030777.3	human	genbank	58_37c	+1	reviewed	missense	c.1207	p.R403W	0.000	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter	HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_1,superfamily_MFS general substrate transporter	-	no_errors
SLC5A11	0	genome.wustl.edu	37	16	24921688	24921688	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	24921688	24921688	C	T	SNP	SLC5A11	NM_052944.2	human	genbank	58_37c	+1	provisional	missense	c.1712	p.P571L	0.380	NULL	HMMPfam_SSF	-	no_errors
SLC6A16	0	genome.wustl.edu	37	19	49796530	49796530	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	49796530	49796530	G	A	SNP	SLC6A16	NM_014037.2	human	genbank	58_37c	-1	validated	silent	c.1728	p.V576	0.018	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
SLC9A8	0	genome.wustl.edu	37	20	48491270	48491270	+	Missense_Mutation	SNP	C	C	G	rs144686154	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	48491270	48491270	C	G	SNP	SLC9A8	NM_015266.1	human	genbank	58_37c	+1	validated	missense	c.987	p.I329M	0.911	HMMPfam_Na_H_Exchanger	HMMPfam_Na_H_Exchanger	-	no_errors
SLCO1B3	0	genome.wustl.edu	37	12	21033899	21033899	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	21033899	21033899	A	T	SNP	SLCO1B3	NM_019844.2	human	genbank	58_37c	+1	validated	missense	c.1442	p.Y481F	0.872	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895	-	no_errors
SLITRK3	0	genome.wustl.edu	37	3	164908085	164908085	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	164908085	164908085	C	T	SNP	SLITRK3	NM_014926.2	human	genbank	58_37c	-1	validated	silent	c.534	p.L178	0.949	HMMSmart_LRR_TYP,superfamily_SSF52058	HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	-	no_errors
SMC1B	0	genome.wustl.edu	37	22	45785753	45785753	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	22	45785753	45785753	G	T	SNP	SMC1B	NM_148674.3	human	genbank	58_37c	-1	validated	missense	c.1570	p.H524N	1.000	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_SMC_hinge,superfamily_SSF52540	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_SMC_hinge,superfamily_SSF52540	-	no_errors
SOAT1	0	genome.wustl.edu	37	1	179310328	179310328	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	179310328	179310328	C	A	SNP	SOAT1	NM_003101.4	human	genbank	58_37c	+1	provisional	silent	c.663	p.L221	0.000	HMMPfam_MBOAT	HMMPfam_MBOAT	-	no_errors
SSX6	0	genome.wustl.edu	37	X	47976517	47976517	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	X	47976517	47976517	C	T	SNP	SSX6	ENST00000304314	human	ensembl	58_37c	+1	known	missense	c.577	p.H193Y	0.000	NULL	HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_SSXRD	-	no_errors
STAC	0	genome.wustl.edu	37	3	36484978	36484978	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	36484978	36484978	G	A	SNP	STAC	NM_003149.1	human	genbank	58_37c	+1	provisional	silent	c.234	p.E78	0.008	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_SH3_2,superfamily_Cysteine-rich domain	-	no_errors
STAU1	0	genome.wustl.edu	37	20	47768247	47768247	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	47768247	47768247	G	C	SNP	STAU1	NM_017453.2	human	genbank	58_37c	-1	reviewed	missense	c.382	p.Q128E	1.000	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like	-	no_errors
SUMO1	0	genome.wustl.edu	37	2	203079096	203079096	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	203079096	203079096	G	T	SNP	SUMO1	NM_001005781.1	human	genbank	58_37c	-1	reviewed	nonsense	c.149	p.S50*	1.000	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like	-	no_errors
SUPT6H	0	genome.wustl.edu	37	17	27000441	27000441	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	27000441	27000441	G	A	SNP	SUPT6H	NM_003170.3	human	genbank	58_37c	+1	validated	missense	c.22	p.E8K	1.000	NULL	HMMSmart_SM00252,HMMPfam_S1,HMMSmart_SM00732,superfamily_Nucleic acid-binding proteins,HMMPfam_Tex_N,HMMSmart_SM00316,superfamily_SH2 domain	-	no_errors
SYNE1	0	genome.wustl.edu	37	6	152847287	152847287	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	6	152847287	152847287	G	A	SNP	SYNE1	NM_182961.2	human	genbank	58_37c	-1	reviewed	silent	c.153	p.D51	0.987	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMPfam_KASH,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat	-	no_errors
TAF1L	0	genome.wustl.edu	37	9	32631492	32631492	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	32631492	32631492	G	C	SNP	TAF1L	NM_153809.2	human	genbank	58_37c	-1	provisional	silent	c.4086	p.L1362	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_TBP-binding,superfamily_TAF_II_230,PatternScan_BROMODOMAIN_1	-	no_errors
TBC1D10B	0	genome.wustl.edu	37	16	30369766	30369766	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	16	30369766	30369766	G	C	SNP	TBC1D10B	NM_015527.3	human	genbank	58_37c	-1	validated	missense	c.1926	p.I642M	1.000	NULL	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,PatternScan_ILVD_EDD_1	-	no_errors
TDRD1	0	genome.wustl.edu	37	10	115986858	115986858	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	10	115986858	115986858	C	G	SNP	TDRD1	NM_198795.1	human	genbank	58_37c	+1	reviewed	missense	c.3203	p.S1068C	1.000	NULL	HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,HMMSmart_TUDOR,HMMPfam_TUDOR,superfamily_SSF63748	-	no_errors
THSD7B	0	genome.wustl.edu	37	2	137852504	137852504	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	137852504	137852504	G	A	SNP	THSD7B	NM_001080427.1	human	genbank	58_37c	+1	provisional	missense	c.919	p.E307K	1.000	superfamily_TSP-1 type 1 repeat	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	-	no_errors
TNFAIP6	0	genome.wustl.edu	37	2	152230093	152230093	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	152230093	152230093	C	A	SNP	TNFAIP6	NM_007115.2	human	genbank	58_37c	+1	reviewed	silent	c.654	p.I218	1.000	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,superfamily_C-type lectin-like	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578413	7578413	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	7578413	7578413	C	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.517	p.V173L	0.996	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TPD52	0	genome.wustl.edu	37	8	80956423	80956423	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	8	80956423	80956423	G	C	SNP	TPD52	NM_001025253.1	human	genbank	58_37c	-1	validated	nonsense	c.434	p.S145*	1.000	HMMPfam_TPD52	HMMPfam_TPD52	-	no_errors
TRAF5	0	genome.wustl.edu	37	1	211526585	211526585	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	211526585	211526585	G	C	SNP	TRAF5	NM_001033910.2	human	genbank	58_37c	+1	reviewed	missense	c.4	p.A2P	1.000	NULL	HMMPfam_zf-TRAF,HMMSmart_SM00184,HMMPfam_MATH,HMMSmart_SM00061,superfamily_TRAF domain-like,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
TRPM6	0	genome.wustl.edu	37	9	77397680	77397680	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	77397680	77397680	C	A	SNP	TRPM6	NM_017662.4	human	genbank	58_37c	-1	reviewed	missense	c.3009	p.E1003D	0.967	HMMPfam_Ion_trans	HMMPfam_Alpha_kinase,HMMSmart_SM00811,HMMPfam_Ion_trans,superfamily_Protein kinase-like (PK-like)	-	no_errors
TSPYL2	0	genome.wustl.edu	37	X	53115366	53115366	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	X	53115366	53115366	G	A	SNP	TSPYL2	NM_022117.3	human	genbank	58_37c	+1	reviewed	missense	c.1792	p.D598N	1.000	NULL	HMMPfam_NAP	-	no_errors
TTN	0	genome.wustl.edu	37	2	179469849	179469849	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	179469849	179469849	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.46351	p.E15451K	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TTN	0	genome.wustl.edu	37	2	179613383	179613383	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	179613383	179613383	G	C	SNP	TTN	NM_133379.3	human	genbank	58_37c	-1	reviewed	missense	c.13744	p.Q4582E	0.002	NULL	PatternScan_THIOL_PROTEASE_HIS,PatternScan_IG_MHC,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,superfamily_SSF48726	-	no_errors
TUBGCP6	0	genome.wustl.edu	37	22	50665188	50665188	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	22	50665188	50665188	C	T	SNP	TUBGCP6	NM_020461.3	human	genbank	58_37c	-1	reviewed	silent	c.1575	p.L525	0.993	HMMPfam_Spc97_Spc98	HMMPfam_Spc97_Spc98	-	no_errors
TXLNB	0	genome.wustl.edu	37	6	139569014	139569014	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	6	139569014	139569014	G	C	SNP	TXLNB	NM_153235.3	human	genbank	58_37c	-1	validated	missense	c.1110	p.F370L	1.000	HMMPfam_Taxilin	HMMPfam_Taxilin	-	no_errors
UBAP2L	0	genome.wustl.edu	37	1	154241261	154241261	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	154241261	154241261	C	T	SNP	UBAP2L	NM_014847.3	human	genbank	58_37c	+1	validated	missense	c.2999	p.S1000F	1.000	NULL	HMMPfam_UBA,HMMSmart_SM00165	-	no_errors
UBE4B	0	genome.wustl.edu	37	1	10190626	10190626	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	10190626	10190626	C	G	SNP	UBE4B	NM_001105562.1	human	genbank	58_37c	+1	reviewed	silent	c.1764	p.L588	0.651	NULL	HMMPfam_U-box,HMMSmart_SM00504,HMMPfam_Ufd2P_core,superfamily_RING/U-box	-	no_errors
UNC80	0	genome.wustl.edu	37	2	210782561	210782561	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	210782561	210782561	C	G	SNP	UNC80	NM_032504.1	human	genbank	58_37c	+1	validated	nonsense	c.4892	p.S1631*	1.000	NULL	NULL	-	no_errors
URB2	0	genome.wustl.edu	37	1	229770771	229770771	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	229770771	229770771	C	T	SNP	URB2	NM_014777.2	human	genbank	58_37c	+1	provisional	silent	c.411	p.V137	0.946	NULL	HMMPfam_Urb2	-	no_errors
USE1	0	genome.wustl.edu	37	19	17330038	17330038	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	17330038	17330038	C	T	SNP	USE1	NM_018467.3	human	genbank	58_37c	+1	validated	nonsense	c.439	p.Q147*	0.098	HMMPfam_Use1	HMMPfam_Use1	-	no_errors
USP36	0	genome.wustl.edu	37	17	76798549	76798554	+	In_Frame_Del	DEL	TTTTTC	TTTTTC	-	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	TTTTTC	TTTTTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	76798549	76798554	TTTTTC	-	DEL	USP36	NM_025090.3	human	genbank	58_37c	-1	validated	in_frame_del	c.2879_2874	p.KK959in_frame_del	0.178:0.173:0.043:0.038:0.100:0.107	NULL	HMMPfam_UCH,PatternScan_IG_MHC,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
USP6	0	genome.wustl.edu	37	17	5048769	5048769	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	5048769	5048769	C	T	SNP	USP6	NM_004505.2	human	genbank	58_37c	+1	validated	nonsense	c.2062	p.Q688*	1.000	HMMPfam_UCH,superfamily_Cysteine proteinases	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
WDR64	0	genome.wustl.edu	37	1	241886720	241886720	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	1	241886720	241886720	C	G	SNP	WDR64	NM_144625.4	human	genbank	58_37c	+1	validated	silent	c.306	p.V102	0.998	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
WNK4	0	genome.wustl.edu	37	17	40948000	40948000	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	17	40948000	40948000	G	A	SNP	WNK4	NM_032387.4	human	genbank	58_37c	+1	reviewed	missense	c.3380	p.S1127N	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_errors
XIRP2	0	genome.wustl.edu	37	2	168106216	168106216	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	2	168106216	168106216	C	T	SNP	XIRP2	NM_152381.4	human	genbank	58_37c	+1	validated	nonsense	c.8314	p.Q2772*	0.485	NULL	HMMPfam_Xin	-	no_errors
ZBBX	0	genome.wustl.edu	37	3	167051719	167051719	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	3	167051719	167051719	C	T	SNP	ZBBX	NM_024687.2	human	genbank	58_37c	-1	validated	missense	c.583	p.D195N	0.617	NULL	HMMPfam_zf-B_box	-	no_errors
ZCCHC6	0	genome.wustl.edu	37	9	88916365	88916365	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	9	88916365	88916365	G	C	SNP	ZCCHC6	NM_024617.3	human	genbank	58_37c	-1	validated	missense	c.4246	p.Q1416E	0.899	superfamily_Retrovirus zinc finger-like domains	HMMPfam_zf-CCHC,HMMSmart_SM00343,HMMPfam_PAP_assoc,HMMPfam_NTP_transf_2,HMMSmart_SM00451,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Retrovirus zinc finger-like domains,superfamily_Nucleotidyltransferase,superfamily_PAP/OAS1 substrate-binding domain	-	no_errors
ZNF334	0	genome.wustl.edu	37	20	45131108	45131108	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	20	45131108	45131108	C	G	SNP	ZNF334	NM_018102.3	human	genbank	58_37c	-1	validated	missense	c.870	p.E290D	0.166	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF384	0	genome.wustl.edu	37	12	6777070	6777072	+	In_Frame_Del	DEL	TGC	TGC	-	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	TGC	TGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	12	6777070	6777072	TGC	-	DEL	ZNF384	NM_001135734.1	human	genbank	58_37c	-1	reviewed	in_frame_del	c.1544_1542	p.Q516in_frame_del	0.291:0.350:0.379	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF460	0	genome.wustl.edu	37	19	57802084	57802084	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	57802084	57802084	G	A	SNP	ZNF460	NM_006635.3	human	genbank	58_37c	+1	validated	missense	c.175	p.E59K	0.000	HMMSmart_KRAB,superfamily_Krueppel-associated_box	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF532	0	genome.wustl.edu	37	18	56587083	56587083	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	18	56587083	56587083	G	T	SNP	ZNF532	NM_018181.4	human	genbank	58_37c	+1	validated	missense	c.1564	p.V522L	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	-	no_errors
ZNF564	0	genome.wustl.edu	37	19	12638670	12638670	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	12638670	12638670	G	A	SNP	ZNF564	NM_144976.3	human	genbank	58_37c	-1	validated	silent	c.252	p.F84	0.782	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF846	0	genome.wustl.edu	37	19	9868536	9868536	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	9868536	9868536	G	A	SNP	ZNF846	NM_001077624.1	human	genbank	58_37c	-1	validated	missense	c.1217	p.S406F	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00614,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZSCAN5C	0	genome.wustl.edu	37	19	56720231	56720231	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1J9-01A-11D-A13L-09	TCGA-D8-A1J9-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6627e4b1-b34c-4aa2-836e-093061442a6d	6014c1c1-0619-4ea0-9f83-1e7a2523a083	19	56720231	56720231	C	T	SNP	ZSCAN5C	ENST00000376267	human	ensembl	58_37c	+1	known	nonsense	c.1153	p.Q385*	0.076	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
