Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AHI1	0	genome.wustl.edu	37	6	135751072	135751072	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	6	135751072	135751072	G	A	SNP	AHI1	NM_001134830.1	human	genbank	58_37c	-1	reviewed	missense	c.2440	p.R814C	1.000	superfamily_WD40 repeat-like	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
ARAF	0	genome.wustl.edu	37	X	47422467	47422467	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	X	47422467	47422467	G	A	SNP	ARAF	ENST00000489496	human	ensembl	58_37c	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_coding_region
CCDC144C	0	genome.wustl.edu	37	17	20224726	20224726	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	17	20224726	20224726	G	A	SNP	CCDC144C	ENST00000425519	human	ensembl	58_37c	+1	known	missense	c.97	p.E33K	0.001	NULL	NULL	-	no_errors
CDC37	0	genome.wustl.edu	37	19	10502337	10502337	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	19	10502337	10502337	C	T	SNP	CDC37	NM_007065.3	human	genbank	58_37c	-1	reviewed	missense	c.1027	p.V343I	1.000	HMMPfam_CDC37_C,superfamily_Hsp90 co-chaperone CDC37	HMMPfam_CDC37_N,HMMPfam_CDC37_C,HMMPfam_CDC37_M,superfamily_Hsp90 co-chaperone CDC37	-	no_errors
CLDND1	0	genome.wustl.edu	37	3	98240072	98240072	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	3	98240072	98240072	T	C	SNP	CLDND1	NM_001040182.1	human	genbank	58_37c	-1	validated	missense	c.266	p.D89G	0.959	NULL	HMMPfam_PMP22_Claudin	-	no_errors
CST9	0	genome.wustl.edu	37	20	23584193	23584193	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	20	23584193	23584193	C	T	SNP	CST9	NM_001008693.2	human	genbank	58_37c	-1	reviewed	missense	c.434	p.G145D	0.000	NULL	superfamily_SSF54403	-	no_errors
DOCK2	0	genome.wustl.edu	37	5	169138958	169138958	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	5	169138958	169138958	A	T	SNP	DOCK2	NM_004946.2	human	genbank	58_37c	+1	validated	missense	c.1502	p.D501V	1.000	NULL	HMMSmart_SM00326,superfamily_SH3-domain,superfamily_Cytochrome c,HMMPfam_SH3_2	-	no_errors
FAM21C	0	genome.wustl.edu	37	10	46254848	46254848	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	10	46254848	46254848	A	T	SNP	FAM21C	NM_015262.2	human	genbank	58_37c	+1	validated	missense	c.1634	p.E545V	1.000	NULL	NULL	-	no_errors
FAT1	0	genome.wustl.edu	37	4	187518179	187518179	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	4	187518179	187518179	G	T	SNP	FAT1	NM_005245.3	human	genbank	58_37c	-1	reviewed	missense	c.12515	p.S4172Y	1.000	NULL	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
FBXO28	0	genome.wustl.edu	37	1	224345435	224345435	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	1	224345435	224345435	G	A	SNP	FBXO28	NM_015176.2	human	genbank	58_37c	+1	validated	missense	c.1094	p.R365Q	1.000	NULL	HMMPfam_F-box	-	no_errors
FLJ35390	0	genome.wustl.edu	37	7	44080619	44080620	+	RNA	INS	-	-	CTT	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	7	44080619	44080620	-	CTT	INS	FLJ35390	NR_015401.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors
FXYD5	0	genome.wustl.edu	37	19	35651628	35651628	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	19	35651628	35651628	G	T	SNP	FXYD5	NM_014164.5	human	genbank	58_37c	+1	reviewed	missense	c.216	p.Q72H	0.006	NULL	HMMPfam_ATP1G1_PLM_MAT8,PatternScan_FXYD	-	no_errors
GCNT2	0	genome.wustl.edu	37	6	10556843	10556843	+	Nonsense_Mutation	SNP	A	A	T	rs55852467	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	6	10556843	10556843	A	T	SNP	GCNT2	NM_001491.2	human	genbank	58_37c	+1	reviewed	nonsense	c.187	p.K63*	0.254	NULL	HMMPfam_Branch	-	no_errors
HNRNPUL1	0	genome.wustl.edu	37	19	41778020	41778020	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	19	41778020	41778020	C	A	SNP	HNRNPUL1	NM_007040.3	human	genbank	58_37c	+1	reviewed	missense	c.452	p.T151N	0.001	NULL	HMMPfam_SAP,HMMSmart_SM00513,HMMPfam_SPRY,HMMSmart_SM00449,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_SAP domain	-	no_errors
HPS3	0	genome.wustl.edu	37	3	148877913	148877913	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	3	148877913	148877913	G	A	SNP	HPS3	NM_032383.3	human	genbank	58_37c	+1	reviewed	missense	c.1953	p.M651I	1.000	NULL	NULL	-	no_errors
IFI27	0	genome.wustl.edu	37	14	94582130	94582131	+	In_Frame_Ins	INS	-	-	GGCCATGGC	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	14	94582130	94582131	-	GGCCATGGC	INS	IFI27	NM_005532.3	human	genbank	58_37c	+1	provisional	in_frame_ins	c.125_126	p.44in_frame_insMAA	0.000:0.000	HMMPfam_Ifi-6-16	HMMPfam_Ifi-6-16	-	no_errors
IGHG2	0	genome.wustl.edu	37	14	106110114	106110114	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	14	106110114	106110114	T	C	SNP	IGHG2	ENST00000390545	human	ensembl	58_37c	-1	known	silent	c.504	p.T168	0.000	HMMPfam_C1-set,superfamily_SSF48726	PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726	-	no_start_codon
KIF21B	0	genome.wustl.edu	37	1	200959275	200959275	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	1	200959275	200959275	C	T	SNP	KIF21B	NM_017596.2	human	genbank	58_37c	-1	provisional	silent	c.3021	p.E1007	1.000	superfamily_Prefoldin,superfamily_WD40_like	HMMSmart_WD40,HMMPfam_Kinesin,HMMSmart_KISc,superfamily_Prefoldin,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
LOC729057	0	genome.wustl.edu	37	22	16123194	16123194	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	22	16123194	16123194	G	A	SNP	LOC729057	XR_042044.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.002	-	-	-	no_errors
LRRFIP2	0	genome.wustl.edu	37	3	37114294	37114294	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	3	37114294	37114294	T	C	SNP	LRRFIP2	NM_006309.2	human	genbank	58_37c	-1	validated	missense	c.1451	p.D484G	1.000	HMMPfam_DUF2051	HMMPfam_DUF2051	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195506603	195506603	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	3	195506603	195506603	T	C	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.11464	p.T3822A	0.718	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195506606	195506606	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	3	195506606	195506606	C	G	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.11461	p.D3821H	0.777	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195506940	195506940	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	3	195506940	195506940	G	C	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.11127	p.H3709Q	0.197	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
NCOA3	0	genome.wustl.edu	37	20	46279837	46279839	+	In_Frame_Del	DEL	CAG	CAG	-	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	CAG	CAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	20	46279837	46279839	CAG	-	DEL	NCOA3	NM_181659.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.3763_3765	p.Q1258in_frame_del	0.584:0.607:0.598	NULL	HMMSmart_SM00091,HMMPfam_HLH,HMMSmart_SM00353,superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_DUF1518,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_PAS,HMMPfam_Nuc_rec_co-act,HMMPfam_SRC-1,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
NCOR2	0	genome.wustl.edu	37	12	124887058	124887059	+	In_Frame_Ins	INS	-	-	GCT	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	12	124887058	124887059	-	GCT	INS	NCOR2	NM_006312.3	human	genbank	58_37c	-1	validated	in_frame_ins	c.1532_1531	p.511in_frame_insQ	0.999:1.000	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
RECQL5	0	genome.wustl.edu	37	17	73624831	73624831	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	17	73624831	73624831	G	A	SNP	RECQL5	NM_004259.5	human	genbank	58_37c	-1	validated	missense	c.2501	p.P834L	0.001	NULL	HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_RecQ5,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SEZ6	0	genome.wustl.edu	37	17	27286098	27286098	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	17	27286098	27286098	C	A	SNP	SEZ6	NM_178860.4	human	genbank	58_37c	-1	validated	silent	c.2052	p.S684	0.136	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,superfamily_Complement control module/SCR domain	-	no_errors
SI	0	genome.wustl.edu	37	3	164710170	164710170	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	3	164710170	164710170	T	A	SNP	SI	NM_001041.3	human	genbank	58_37c	-1	reviewed	missense	c.4857	p.K1619N	0.000	HMMPfam_Glyco_hydro_31	HMMPfam_Glyco_hydro_31,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2,HMMPfam_Trefoil,HMMSmart_SM00018,superfamily_Trefoil,superfamily_(Trans)glycosidases,PatternScan_P_TREFOIL	-	no_errors
SUPT7L	0	genome.wustl.edu	37	2	27876556	27876556	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	2	27876556	27876556	T	G	SNP	SUPT7L	NM_014860.1	human	genbank	58_37c	-1	provisional	missense	c.1041	p.Q347H	1.000	NULL	HMMPfam_Bromo_TP,HMMSmart_SM00576	-	no_errors
THAP2	0	genome.wustl.edu	37	12	72068026	72068026	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	12	72068026	72068026	G	T	SNP	THAP2	NM_031435.2	human	genbank	58_37c	+1	provisional	missense	c.115	p.V39F	1.000	HMMPfam_THAP,HMMSmart_SM00692	HMMPfam_THAP,HMMSmart_SM00692	-	no_errors
TOP2B	0	genome.wustl.edu	37	3	25668734	25668734	+	Silent	SNP	T	T	G	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	3	25668734	25668734	T	G	SNP	TOP2B	NM_001068.2	human	genbank	58_37c	-1	reviewed	silent	c.1945	p.R649	1.000	HMMSmart_TOP2c,superfamily_Topo_IIA_cen	HMMSmart_TOP2c,HMMPfam_DNA_topoisoIV,HMMSmart_TOP4c,HMMPfam_HATPase_c,HMMSmart_HATPase_c,superfamily_ATP_bd_ATPase,HMMPfam_DTHCT,HMMPfam_DNA_gyraseB,superfamily_Topo_IIA_cen,PatternScan_TOPOISOMERASE_II,superfamily_Ribosomal_S5_D2-typ_fold	-	no_errors
VEZF1	0	genome.wustl.edu	37	17	56056604	56056605	+	In_Frame_Ins	INS	-	-	TGC	novel	unknown	TCGA-D8-A1JB-01A-11D-A13L-09	TCGA-D8-A1JB-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	54621c54-b7ef-48e4-aa68-e2fe10bf0afb	999fc643-568d-4513-9a75-6c68987a2628	17	56056604	56056605	-	TGC	INS	VEZF1	NM_007146.2	human	genbank	58_37c	-1	validated	in_frame_ins	c.1047_1046	p.353in_frame_insQ	0.934:0.940	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
