Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCB7	0	genome.wustl.edu	37	X	74376106	74376106	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	74376106	74376106	A	G	SNP	ABCB7	NM_004299.3	human	genbank	58_37c	-1	reviewed	missense	c.2	p.M1T	1.000	NULL	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_ABC_TM_1,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ANKRA2	0	genome.wustl.edu	37	5	72858604	72858604	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	5	72858604	72858604	G	A	SNP	ANKRA2	NM_023039.3	human	genbank	58_37c	-1	provisional	missense	c.103	p.P35S	0.085	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
ANO6	0	genome.wustl.edu	37	12	45781974	45781974	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	12	45781974	45781974	G	A	SNP	ANO6	NM_001142679.1	human	genbank	58_37c	+1	validated	missense	c.1196	p.R399H	1.000	NULL	HMMPfam_DUF590	-	no_errors
APCDD1L	0	genome.wustl.edu	37	20	57036021	57036021	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	20	57036021	57036021	C	T	SNP	APCDD1L	NM_153360.1	human	genbank	58_37c	-1	provisional	missense	c.1331	p.R444H	0.994	NULL	NULL	-	no_errors
ARID5B	0	genome.wustl.edu	37	10	63851397	63851397	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	10	63851397	63851397	G	C	SNP	ARID5B	NM_032199.2	human	genbank	58_37c	+1	validated	missense	c.2175	p.R725S	0.998	NULL	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like	-	no_errors
C20orf132	0	genome.wustl.edu	37	20	35731179	35731179	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	20	35731179	35731179	G	C	SNP	C20orf132	ENST00000400441	human	ensembl	58_37c	-1	known	missense	c.3040	p.L1014V	0.996	NULL	superfamily_ARM repeat	-	no_errors
CCNB3	0	genome.wustl.edu	37	X	50031866	50031866	+	Silent	SNP	A	A	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	50031866	50031866	A	C	SNP	CCNB3	NM_033031.2	human	genbank	58_37c	+1	reviewed	silent	c.183	p.S61	0.998	NULL	HMMPfam_Cyclin_C,HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like	-	no_errors
CELA3B	0	genome.wustl.edu	37	1	22304922	22304922	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	22304922	22304922	C	T	SNP	CELA3B	NM_007352.2	human	genbank	58_37c	+1	reviewed	missense	c.104	p.A35V	0.979	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
CENPF	0	genome.wustl.edu	37	1	214832191	214832191	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	214832191	214832191	A	G	SNP	CENPF	NM_016343.3	human	genbank	58_37c	+1	reviewed	splice_site	c.8963-2	e18-2	0.992	-	-	-	no_errors
CILP	0	genome.wustl.edu	37	15	65490682	65490682	+	Missense_Mutation	SNP	C	C	T	rs147805917	byFrequency	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	15	65490682	65490682	C	T	SNP	CILP	NM_003613.3	human	genbank	58_37c	-1	reviewed	missense	c.1942	p.E648K	1.000	NULL	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Carboxypeptidase regulatory domain,HMMPfam_ig,PatternScan_HEXAPEP_TRANSFERASES,superfamily_Immunoglobulin	-	no_errors
CLCN5	0	genome.wustl.edu	37	X	49845354	49845354	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	49845354	49845354	G	A	SNP	CLCN5	NM_001127898.1	human	genbank	58_37c	+1	reviewed	missense	c.707	p.C236Y	1.000	HMMPfam_Voltage_CLC,superfamily_Clc chloride channel	HMMPfam_CBS,HMMSmart_SM00116,HMMPfam_Voltage_CLC,superfamily_Clc chloride channel,superfamily_CBS-domain	-	no_errors
CLU	0	genome.wustl.edu	37	8	27461880	27461880	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	8	27461880	27461880	T	C	SNP	CLU	NM_001831.2	human	genbank	58_37c	-1	reviewed	missense	c.1018	p.I340V	1.000	HMMPfam_Clusterin,HMMSmart_CLa	HMMPfam_Clusterin,PatternScan_CLUSTERIN_1,PatternScan_CLUSTERIN_2,HMMSmart_CLb,HMMSmart_CLa	-	no_errors
COMMD7	0	genome.wustl.edu	37	20	31294404	31294404	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	20	31294404	31294404	G	A	SNP	COMMD7	NM_053041.2	human	genbank	58_37c	-1	validated	missense	c.317	p.A106V	1.000	HMMPfam_HCaRG	HMMPfam_HCaRG	-	no_errors
DENND5B	0	genome.wustl.edu	37	12	31579329	31579329	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	12	31579329	31579329	T	C	SNP	DENND5B	NM_144973.3	human	genbank	58_37c	-1	validated	silent	c.2136	p.G712	0.740	NULL	HMMPfam_PLAT,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_RUN,HMMSmart_SM00593,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)	-	no_errors
DLC1	0	genome.wustl.edu	37	8	12956964	12956964	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	8	12956964	12956964	G	T	SNP	DLC1	NM_182643.2	human	genbank	58_37c	-1	reviewed	missense	c.2882	p.P961H	0.996	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_START,HMMSmart_SM00234,superfamily_GTPase activation domain GAP,HMMPfam_SAM_2,superfamily_Bet v1-like	-	no_errors
DMPK	0	genome.wustl.edu	37	19	46282601	46282601	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	19	46282601	46282601	T	G	SNP	DMPK	NM_001081563.1	human	genbank	58_37c	-1	reviewed	missense	c.383	p.E128A	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00133,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
DSCAM	0	genome.wustl.edu	37	21	41710185	41710185	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	21	41710185	41710185	G	A	SNP	DSCAM	NM_001389.3	human	genbank	58_37c	-1	validated	silent	c.1626	p.N542	0.092	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
DSPP	0	genome.wustl.edu	37	4	88536886	88536886	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	4	88536886	88536886	C	T	SNP	DSPP	ENST00000432448	human	ensembl	58_37c	+1	known	missense	c.1607	p.A536V	0.076	HMMPfam_Nitroreductase,HMMPfam_COX1,HMMPfam_DUF81,HMMPfam_Peptidase_M20,HMMPfam_C4dic_mal_tran,HMMPfam_OPT,HMMPfam_Na_H_Exchanger,HMMPfam_MFS_1	HMMPfam_Nitroreductase,HMMPfam_COX1,HMMPfam_DUF81,HMMPfam_Peptidase_M20,HMMPfam_CitMHS,HMMPfam_C4dic_mal_tran,HMMPfam_OPT,HMMPfam_TerC,HMMPfam_Na_H_Exchanger,HMMPfam_MFS_1,HMMPfam_DUF2339	-	no_start_codon:no_stop_codon
EGFR	0	genome.wustl.edu	37	7	55211097	55211097	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	7	55211097	55211097	G	A	SNP	EGFR	NM_005228.3	human	genbank	58_37c	+1	reviewed	missense	c.340	p.E114K	1.000	HMMPfam_Recep_L_domain,superfamily_L domain-like	HMMPfam_Recep_L_domain,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Furin-like,HMMSmart_SM00261,PatternScan_PROTEIN_KINASE_TYR,superfamily_Growth factor receptor domain,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_L domain-like	-	no_errors
ENSG00000198786	0	genome.wustl.edu	37	MT	13633	13633	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	MT	13633	13633	G	A	SNP	ENSG00000198786	ENST00000361567	human	ensembl	58_37c	+1	known	missense	c.1297	p.G433S	NULL	HMMPfam_NADH5_C	HMMPfam_Oxidored_q1_N,HMMPfam_Oxidored_q1,HMMPfam_NADH5_C	-	mismatch_between_exon_seq_and_reference
ENSG00000198938	0	genome.wustl.edu	37	MT	9614	9614	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	MT	9614	9614	A	G	SNP	ENSG00000198938	ENST00000362079	human	ensembl	58_37c	+1	known	silent	c.408	p.V136	NULL	HMMPfam_COX3,superfamily_Cytochrome c oxidase subunit III-like	HMMPfam_COX3,superfamily_Cytochrome c oxidase subunit III-like	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000210164	0	genome.wustl.edu	37	MT	10000	10000	+	RNA	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	MT	10000	10000	G	A	SNP	ENSG00000210164	ENST00000387429	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000225634	0	genome.wustl.edu	37	4	88537105	88537105	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	4	88537105	88537105	C	T	SNP	ENSG00000225634	ENST00000454415	human	ensembl	58_37c	-1	known	missense	c.484	p.A162T	0.517	NULL	NULL	-	no_start_codon:no_stop_codon
ENSG00000232657	0	genome.wustl.edu	37	4	49110171	49110171	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	4	49110171	49110171	T	C	SNP	ENSG00000232657	ENST00000417204	human	ensembl	58_37c	-1	known	silent	c.108	p.E36	0.000	NULL	NULL	-	no_stop_codon
EPPK1	0	genome.wustl.edu	37	8	144940331	144940331	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	8	144940331	144940331	C	T	SNP	EPPK1	NM_031308.1	human	genbank	58_37c	-1	validated	missense	c.7091	p.R2364Q	0.940	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat	-	pseudogene
FHOD3	0	genome.wustl.edu	37	18	34297797	34297797	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	18	34297797	34297797	T	G	SNP	FHOD3	NM_025135.2	human	genbank	58_37c	+1	validated	missense	c.2011	p.L671V	0.962	NULL	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd,superfamily_ARM-type_fold	-	no_errors
FNDC3B	0	genome.wustl.edu	37	3	172098814	172098814	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	3	172098814	172098814	A	G	SNP	FNDC3B	NM_001135095.1	human	genbank	58_37c	+1	validated	silent	c.3234	p.P1078	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	PatternScan_HEMATOPO_REC_L_F2,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	-	no_errors
GRIPAP1	0	genome.wustl.edu	37	X	48853758	48853758	+	Silent	SNP	T	T	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	48853758	48853758	T	A	SNP	GRIPAP1	NM_020137.3	human	genbank	58_37c	-1	reviewed	silent	c.210	p.V70	0.863	NULL	superfamily_Prefoldin	-	no_errors
GRM5	0	genome.wustl.edu	37	11	88583174	88583174	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	11	88583174	88583174	C	T	SNP	GRM5	NM_001143831.2	human	genbank	58_37c	-1	reviewed	missense	c.811	p.A271T	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,HMMPfam_GluR_Homer-bdg,superfamily_Periplasmic binding protein-like I	-	no_errors
HBS1L	0	genome.wustl.edu	37	6	135358867	135358867	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	6	135358867	135358867	C	G	SNP	HBS1L	NM_001145207.1	human	genbank	58_37c	-1	reviewed	missense	c.728	p.R243T	0.001	NULL	HMMPfam_DUF1916,superfamily_SSF109732	-	no_errors
IL22RA2	0	genome.wustl.edu	37	6	137482869	137482869	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	6	137482869	137482869	G	A	SNP	IL22RA2	NM_052962.2	human	genbank	58_37c	-1	reviewed	silent	c.18	p.C6	0.643	HMMPfam_IL10Ra-bind	superfamily_Fibronectin type III,HMMPfam_IL10Ra-bind	-	no_errors
KDM4DL	0	genome.wustl.edu	37	11	94759549	94759549	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	11	94759549	94759549	C	A	SNP	KDM4DL	ENST00000450979	human	ensembl	58_37c	+1	known	nonsense	c.828	p.Y276*	1.000	HMMSmart_JmjC,HMMPfam_JmjC	HMMSmart_JmjC,HMMPfam_JmjN,HMMPfam_JmjC	-	no_errors
KIF21A	0	genome.wustl.edu	37	12	39734847	39734848	+	Frame_Shift_Ins	INS	-	-	TTAA	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	12	39734847	39734848	-	TTAA	INS	KIF21A	NM_017641.3	human	genbank	58_37c	-1	validated	frame_shift_ins	c.1932_1931	p.K644fs	1.000:1.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_Prefoldin,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LAMB4	0	genome.wustl.edu	37	7	107738822	107738823	+	In_Frame_Ins	INS	-	-	CCT	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	7	107738822	107738823	-	CCT	INS	LAMB4	ENST00000414450	human	ensembl	58_37c	-1	known	in_frame_ins	c.1269_1268	p.424in_frame_insG	0.002:0.001	NULL	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_SM00136,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
LOC100130109	0	genome.wustl.edu	37	19	5576900	5576900	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	19	5576900	5576900	G	A	SNP	LOC100130109	XM_001726381.2	human	genbank	58_37c	-1	model	missense	c.50	p.P17L	0.993	superfamily_Sm-like ribonucleoproteins	HMMPfam_LSM,HMMSmart_SM00651,superfamily_Sm-like ribonucleoproteins	-	no_errors
LOC642935	0	genome.wustl.edu	37	15	85801779	85801779	+	RNA	SNP	C	T	T	rs71269442	byFrequency	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	15	85801779	85801779	C	T	SNP	LOC642935	XR_042283.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.879	-	-	-	pseudogene
LOC646891	0	genome.wustl.edu	37	1	175013955	175013955	+	RNA	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	175013955	175013955	C	T	SNP	LOC646891	XR_017348.3	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.003	-	-	-	pseudogene
MSGN1	0	genome.wustl.edu	37	2	17997955	17997955	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	2	17997955	17997955	C	T	SNP	MSGN1	NM_001105569.1	human	genbank	58_37c	+1	provisional	missense	c.170	p.S57F	0.700	NULL	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic	-	no_errors
MUC20	0	genome.wustl.edu	37	3	195452645	195452645	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	3	195452645	195452645	G	A	SNP	MUC20	ENST00000436408	human	ensembl	58_37c	+1	known	missense	c.1171	p.G391S	0.001	NULL	NULL	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195511523	195511523	+	Missense_Mutation	SNP	C	C	G	rs142766505	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	3	195511523	195511523	C	G	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.6928	p.A2310P	0.376	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
NFE4	0	genome.wustl.edu	37	7	102616489	102616489	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	7	102616489	102616489	G	T	SNP	NFE4	NM_001085386.1	human	genbank	58_37c	+1	reviewed	nonsense	c.367	p.E123*	0.086	NULL	NULL	-	no_errors
OR5I1	0	genome.wustl.edu	37	11	55703086	55703086	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	11	55703086	55703086	G	C	SNP	OR5I1	NM_006637.1	human	genbank	58_37c	-1	reviewed	missense	c.791	p.P264R	0.944	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OTUB1	0	genome.wustl.edu	37	11	63753882	63753882	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	11	63753882	63753882	G	C	SNP	OTUB1	ENST00000422031	human	ensembl	58_37c	+1	known	missense	c.65	p.R22P	0.359	NULL	HMMPfam_Peptidase_C65,superfamily_Cysteine proteinases	-	no_errors
PCDHA2	0	genome.wustl.edu	37	5	140174848	140174848	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	5	140174848	140174848	C	T	SNP	PCDHA2	NM_018905.2	human	genbank	58_37c	+1	reviewed	missense	c.299	p.A100V	0.000	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PER1	0	genome.wustl.edu	37	17	8051116	8051116	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	17	8051116	8051116	G	A	SNP	PER1	NM_002616.2	human	genbank	58_37c	-1	reviewed	missense	c.1264	p.H422Y	1.000	HMMPfam_PAS_3,superfamily_PYP-like sensor domain (PAS domain)	HMMSmart_SM00091,HMMPfam_PAS_3,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178927430	178927430	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	3	178927430	178927430	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1193	p.R398H	1.000	HMMSmart_C2,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,superfamily_C2_CaLB	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A	rs104886003	byCluster	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	3	178936091	178936091	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1633	p.E545K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PTPN22	0	genome.wustl.edu	37	1	114377000	114377000	+	Silent	SNP	T	T	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	114377000	114377000	T	A	SNP	PTPN22	NM_015967.4	human	genbank	58_37c	-1	reviewed	silent	c.1956	p.T652	0.100	NULL	HMMPfam_Y_phosphatase,HMMSmart_PTPc,PatternScan_TYR_PHOSPHATASE_1,superfamily_SSF52799	-	no_errors
RBMX	0	genome.wustl.edu	37	X	135960146	135960147	+	Frame_Shift_Ins	INS	-	-	AA	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	135960146	135960147	-	AA	INS	RBMX	NM_002139.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.316_315	p.P105fs	1.000:1.000	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RBM1CTR,superfamily_RNA-binding domain RBD	-	no_errors
SAGE1	0	genome.wustl.edu	37	X	134992588	134992588	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	134992588	134992588	C	T	SNP	SAGE1	NM_018666.2	human	genbank	58_37c	+1	reviewed	missense	c.1879	p.H627Y	0.018	NULL	NULL	-	no_errors
SCN2A	0	genome.wustl.edu	37	2	166221684	166221684	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	2	166221684	166221684	G	A	SNP	SCN2A	NM_001040142.1	human	genbank	58_37c	+1	reviewed	missense	c.3431	p.S1144N	1.000	HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	-	no_errors
SFRS11	0	genome.wustl.edu	37	1	70712533	70712533	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	70712533	70712533	G	C	SNP	SFRS11	NM_004768.2	human	genbank	58_37c	+1	reviewed	missense	c.965	p.R322P	1.000	NULL	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
SPTLC1	0	genome.wustl.edu	37	9	94809915	94809915	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	9	94809915	94809915	A	C	SNP	SPTLC1	NM_006415.2	human	genbank	58_37c	-1	reviewed	missense	c.964	p.S322A	1.000	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578394	7578394	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	17	7578394	7578394	T	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.536	p.H179R	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
UBAP2	0	genome.wustl.edu	37	9	33923840	33923841	+	In_Frame_Ins	INS	-	-	GGG	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	9	33923840	33923841	-	GGG	INS	UBAP2	NM_018449.2	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.2749_2748	p.916in_frame_insP	1.000:1.000	NULL	HMMPfam_UBA,HMMSmart_UBA	-	no_errors
USP10	0	genome.wustl.edu	37	16	84778300	84778300	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	16	84778300	84778300	G	T	SNP	USP10	NM_005153.2	human	genbank	58_37c	+1	reviewed	missense	c.213	p.L71F	0.138	NULL	HMMPfam_UCH,HMMPfam_PAM2,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
ZIC3	0	genome.wustl.edu	37	X	136652179	136652179	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	136652179	136652179	A	C	SNP	ZIC3	NM_003413.3	human	genbank	58_37c	+1	reviewed	missense	c.1354	p.T452P	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF564	0	genome.wustl.edu	37	19	12639170	12639171	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	19	12639170	12639171	-	T	INS	ZNF564	NM_144976.3	human	genbank	58_37c	-1	validated	frame_shift_ins	c.139_138	p.W46fs	0.833:0.789	HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF76	0	genome.wustl.edu	37	6	35261689	35261689	+	Missense_Mutation	SNP	G	G	A	rs148794766	unknown	TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	6	35261689	35261689	G	A	SNP	ZNF76	ENST00000498555	human	ensembl	58_37c	+1	known	missense	c.89	p.S30N	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
