Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
AGRN	375790	genome.wustl.edu	37	1	981346	981346	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198576.2	+1	validated	p.A895T	0.710	23	0%	33	48.5%	74	45.9%	benign(0.004)	tolerated(0.21)	neutral(0.044)	superfamily_SSF57196
AGRN	375790	genome.wustl.edu	37	1	981460	981460	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198576.2	+1	validated	p.A933T	0.106	49	0%	61	26.2%	72	29.1%	benign(0.382)	tolerated(0.57)	neutral(0.128)	HMMPfam_Kazal_1,HMMSmart_KAZAL,superfamily_SSF100895
AGRN	375790	genome.wustl.edu	37	1	982726	982726	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198576.2	+1	validated	p.G1136	0.716	4	0.000	11	0.545	39	46.1%	-	-	-	HMMPfam_SEA,HMMSmart_SEA,superfamily_SSF82671
C1orf159	54991	genome.wustl.edu	37	1	1019726	1019726	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379339	-1	known	p.S206N	0.006	15	0%	14	42.9%	1	0%	unknown(0)	tolerated(0.24)	-	NULL
GLTPD1	80772	genome.wustl.edu	37	1	1263026	1263026	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029885.1	+1	validated	p.N176	0.918	6	0.000	9	0.778	45	33.3%	-	-	-	HMMPfam_GLTP,superfamily_Glycolipid_transfer_prot
TAS1R3	83756	genome.wustl.edu	37	1	1269072	1269072	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152228.1	+1	provisional	p.S596N	0.266	5	0.000	11	0.364	2	50%	probably_damaging(0.983)	deleterious(0.01)	deleterious(0.835)	HMMPfam_7tm_3
TAS1R3	83756	genome.wustl.edu	37	1	1269210	1269210	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152228.1	+1	provisional	p.L642P	1.000	4	0.000	12	0.583	3	66.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_7tm_3
LOC100288202	100288202	genome.wustl.edu	37	1	1289876	1289876	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342019.1	+1	model	p.R101C	0.088	4	0.000	9	0.556	8	37.5%	-	-	-	NULL
CCNL2	81669	genome.wustl.edu	37	1	1323235	1323235	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030937.4	-1	validated	p.R378Q	0.921	11	0%	23	65.2%	90	56.6%	benign(0.017)	tolerated(0.49)	neutral(0.011)	NULL
CCNL2	81669	genome.wustl.edu	37	1	1333632	1333632	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030937.4	-1	validated	p.R152*	0.831	100	0%	94	37.2%	39	48.7%	-	-	-	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like
CCNL2	81669	genome.wustl.edu	37	1	1333709	1333709	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030937.4	-1	validated	p.A126D	1.000	82	0%	67	43.3%	34	47%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like
ATAD3A	55210	genome.wustl.edu	37	1	1461868	1461868	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018188.3	+1	validated	p.T480A	1.000	40	0%	37	37.8%	53	37.7%	benign(0.004)	tolerated(1)	-	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
ATAD3A	55210	genome.wustl.edu	37	1	1464610	1464610	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018188.3	+1	validated	p.K553E	1.000	19	0%	22	50%	64	34.3%	benign(0.212)	tolerated(0.21)	neutral(0.065)	HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
SLC35E2	9906	genome.wustl.edu	37	1	1607635	1607635	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001110781.1	-1	validated	p.A109V	0.997	63	0%	60	65%	36	47.2%	benign(0.178)	tolerated(0.51)	neutral(0.026)	NULL
CALML6	163688	genome.wustl.edu	37	1	1847964	1847964	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138705.2	+1	validated	p.T55A	0.575	36	0%	42	28.6%	1	0%	benign(0.047)	tolerated(0.07)	neutral(0.322)	HMMSmart_EFh,superfamily_SSF47473
CALML6	163688	genome.wustl.edu	37	1	1848286	1848286	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138705.2	+1	validated	p.R117C	0.050	45	0%	25	40%	1	0%	benign(0.007)	deleterious(0)	neutral(0.445)	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473
KIAA1751	85452	genome.wustl.edu	37	1	1897932	1897932	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080484.1	-1	predicted	p.R427W	0.001	14	0%	15	40%	0	-	benign(0.084)	deleterious(0.02)	neutral(0.389)	NULL
KIAA1751	85452	genome.wustl.edu	37	1	1904461	1904461	+	Missense_Mutation	SNP	G	G	T	rs182415144	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080484.1	-1	predicted	p.L234I	0.149	22	0%	28	46.4%	0	-	possibly_damaging(0.838)	tolerated(0.44)	neutral(0.333)	NULL
GABRD	2563	genome.wustl.edu	37	1	1956796	1956796	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000815.4	+1	reviewed	p.A69T	0.984	22	0%	14	42.9%	2	0%	benign(0.002)	tolerated(0.22)	neutral(0.042)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
GABRD	2563	genome.wustl.edu	37	1	1961053	1961053	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000815.4	+1	reviewed	p.A304V	0.997	32	0%	17	29.4%	1	0%	benign(0.009)	tolerated(0.34)	neutral(0.024)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
C1orf86	199990	genome.wustl.edu	37	1	2132527	2132527	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378558	-1	known	p.A4V	0.002	23	0%	24	58.3%	0	-	-	-	-	NULL
PLCH2	9651	genome.wustl.edu	37	1	2435904	2435904	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014638.2	+1	provisional	p.S1168N	0.000	23	0%	32	40.6%	4	50%	benign(0.184)	deleterious(0.01)	neutral(0.423)	NULL
PANK4	55229	genome.wustl.edu	37	1	2452731	2452731	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018216.1	-1	reviewed	p.P77	0.501	117	0%	87	52.9%	22	59%	-	-	-	HMMPfam_Fumble
PRDM16	63976	genome.wustl.edu	37	1	3335260	3335260	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022114.3	+1	reviewed	p.A963V	1.000	28	0%	34	44.1%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
TPRG1L	127262	genome.wustl.edu	37	1	3542422	3542422	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182752.3	+1	validated	p.E147*	1.000	47	0%	46	43.5%	25	20%	-	-	-	NULL
CCDC27	148870	genome.wustl.edu	37	1	3683814	3683814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152492.2	+1	validated	p.E516D	0.213	31	0%	25	32%	0	-	possibly_damaging(0.794)	tolerated(0.18)	neutral(0.354)	NULL
LRRC47	57470	genome.wustl.edu	37	1	3703548	3703548	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020710.2	-1	validated	p.V314	0.081	22	0%	25	48%	41	85.3%	-	-	-	NULL
LRRC47	57470	genome.wustl.edu	37	1	3712464	3712464	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020710.2	-1	validated	p.E193*	0.659	5	0.000	8	0.750	22	13.6%	-	-	-	superfamily_SSF52047
DFFB	1677	genome.wustl.edu	37	1	3782395	3782395	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004402.2	+1	reviewed	p.R87	0.941	14	0%	15	46.7%	3	33.3%	-	-	-	superfamily_His-Me finger endonucleases
C1orf174	339448	genome.wustl.edu	37	1	3807283	3807283	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207356.2	-1	validated	p.S156	0.009	75	0%	57	24.6%	55	20%	-	-	-	NULL
NPHP4	261734	genome.wustl.edu	37	1	5925255	5925255	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015102.2	-1	reviewed	p.V1241	0.445	9	0.000	8	0.500	12	50%	-	-	-	NULL
CHD5	26038	genome.wustl.edu	37	1	6186717	6186717	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015557.1	-1	provisional	p.Q1331H	1.000	20	0%	27	40.7%	0	-	benign(0.028)	tolerated(0.42)	neutral(0.015)	HMMPfam_DUF1087
CHD5	26038	genome.wustl.edu	37	1	6190296	6190296	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015557.1	-1	provisional	p.D1119N	1.000	16	0%	18	44.4%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540
CHD5	26038	genome.wustl.edu	37	1	6194221	6194221	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015557.1	-1	provisional	p.R1037	1.000	21	0%	19	31.6%	0	-	-	-	-	superfamily_SSF52540
CHD5	26038	genome.wustl.edu	37	1	6203922	6203922	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015557.1	-1	provisional	p.D668	0.001	49	0%	59	35.6%	0	-	-	-	-	superfamily_SSF52540
CHD5	26038	genome.wustl.edu	37	1	6219495	6219495	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015557.1	-1	provisional	p.N96	0.936	584	0%	413	15.7%	0	-	-	-	-	NULL
RPL22	6146	genome.wustl.edu	37	1	6246817	6246817	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000983.3	-1	reviewed	p.R101H	1.000	194	0.5%	112	40.2%	534	40.2%	possibly_damaging(0.44)	deleterious(0.03)	deleterious(0.508)	HMMPfam_Ribosomal_L22e
ACOT7	11332	genome.wustl.edu	37	1	6341327	6341327	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377860	-1	known	p.G276R	0.237	15	0%	25	48%	68	42.6%	probably_damaging(0.996)	-	-	NULL
ESPN	83715	genome.wustl.edu	37	1	6488371	6488371	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031475.2	+1	reviewed	p.G127D	0.952	24	0%	20	50%	1	100%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
PLEKHG5	57449	genome.wustl.edu	37	1	6528159	6528159	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198681.2	-1	reviewed	p.G990C	0.000	5	0.000	10	0.500	11	45.4%	benign(0.014)	deleterious(0.03)	neutral(0.365)	NULL
TAS1R1	80835	genome.wustl.edu	37	1	6634810	6634810	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000411823	+1	known	p.S132L	0.686	39	2.6%	36	38.9%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
TAS1R1	80835	genome.wustl.edu	37	1	6638795	6638795	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138697.3	+1	reviewed	p.F559L	0.993	30	3.3%	34	55.9%	1	0%	benign(0.309)	tolerated(0.23)	neutral(0.138)	NULL
TAS1R1	80835	genome.wustl.edu	37	1	6639441	6639441	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138697.3	+1	reviewed	p.A775T	0.717	57	0%	56	41.1%	0	-	benign(0.001)	tolerated(0.87)	neutral(0.001)	HMMPfam_7tm_3
THAP3	90326	genome.wustl.edu	37	1	6690366	6690366	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138350.2	+1	provisional	p.D96N	0.981	60	0%	61	39.3%	24	45.8%	possibly_damaging(0.728)	tolerated(0.48)	neutral(0.276)	NULL
DNAJC11	55735	genome.wustl.edu	37	1	6711620	6711620	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018198.3	-1	validated	p.L225I	0.998	211	0%	104	47.1%	13	53.8%	benign(0.016)	tolerated(0.24)	neutral(0.038)	NULL
CAMTA1	23261	genome.wustl.edu	37	1	7723927	7723927	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015215.1	+1	validated	p.H440	1.000	37	0%	28	32.1%	0	-	-	-	-	NULL
CAMTA1	23261	genome.wustl.edu	37	1	7797008	7797008	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015215.1	+1	validated	p.S1094I	1.000	212	0%	151	45.7%	0	-	probably_damaging(1)	tolerated(0.36)	deleterious(0.520)	superfamily_Ankyrin repeat
CAMTA1	23261	genome.wustl.edu	37	1	7798021	7798021	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015215.1	+1	validated	p.L1221M	1.000	116	0%	51	51%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CAMTA1	23261	genome.wustl.edu	37	1	7826532	7826532	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015215.1	+1	validated	p.E1668G	1.000	314	0%	199	35.7%	0	-	possibly_damaging(0.865)	deleterious(0.03)	deleterious(0.700)	NULL
PER3	8863	genome.wustl.edu	37	1	7858689	7858689	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016831.1	+1	reviewed	p.P249H	0.830	145	0%	82	40.2%	2	50%	probably_damaging(0.997)	tolerated(0.57)	deleterious(0.472)	NULL
PER3	8863	genome.wustl.edu	37	1	7895931	7895931	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016831.1	+1	reviewed	p.V1099	0.000	128	0%	81	61.7%	2	50%	-	-	-	NULL
ERRFI1	54206	genome.wustl.edu	37	1	8073739	8073739	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018948.3	-1	validated	p.S307L	0.988	176	0%	104	44.2%	55	58.1%	probably_damaging(0.99)	tolerated(0.12)	deleterious(0.702)	NULL
SLC45A1	50651	genome.wustl.edu	37	1	8390848	8390848	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080397.1	+1	provisional	p.G432V	0.983	15	0%	12	66.7%	1	0%	benign(0.002)	tolerated(0.1)	neutral(0.286)	NULL
RERE	473	genome.wustl.edu	37	1	8526066	8526066	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042681.1	-1	reviewed	p.Y374	0.920	40	2.5%	27	25.9%	19	47.3%	-	-	-	NULL
CA6	765	genome.wustl.edu	37	1	9009386	9009386	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001215.2	+1	reviewed	p.S48	0.073	25	0%	21	47.6%	0	-	-	-	-	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
SLC2A7	155184	genome.wustl.edu	37	1	9075184	9075184	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207420.2	-1	provisional	p.A236V	0.619	23	0%	22	40.9%	0	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_Sugar_tr,superfamily_MFS_gen_substrate_transporter
SLC2A7	155184	genome.wustl.edu	37	1	9075295	9075295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207420.2	-1	provisional	p.P199L	0.997	24	0%	12	66.7%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Sugar_tr,superfamily_MFS_gen_substrate_transporter
SLC2A7	155184	genome.wustl.edu	37	1	9079292	9079292	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207420.2	-1	provisional	p.R138*	0.160	50	0%	32	40.6%	0	-	-	-	-	HMMPfam_Sugar_tr,superfamily_MFS_gen_substrate_transporter
H6PD	9563	genome.wustl.edu	37	1	9305619	9305619	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004285.3	+1	reviewed	p.Q209R	1.000	13	0%	15	26.7%	6	50%	benign(0.424)	deleterious(0.03)	deleterious(0.502)	HMMPfam_G6PD_N,superfamily_NAD(P)-bd,PatternScan_G6P_DEHYDROGENASE,superfamily_SSF55347
TMEM201	199953	genome.wustl.edu	37	1	9656060	9656060	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130924.2	+1	validated	p.F76V	1.000	12	0%	14	57.1%	13	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF2349
TMEM201	199953	genome.wustl.edu	37	1	9670662	9670662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130924.2	+1	validated	p.R498C	1.000	13	0%	22	54.5%	17	47%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C1orf200	644997	genome.wustl.edu	37	1	9713991	9713991	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377320	-1	known	p.R117H	0.000	84	0%	80	42.5%	0	-	possibly_damaging(0.865)	-	-	NULL
PIK3CD	5293	genome.wustl.edu	37	1	9770516	9770516	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005026.3	+1	validated	p.M1I	1.000	62	0%	33	48.5%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
CLSTN1	22883	genome.wustl.edu	37	1	9809669	9809669	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009566.1	-1	validated	p.G279S	1.000	65	0%	73	49.3%	97	43.2%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
CLSTN1	22883	genome.wustl.edu	37	1	9809933	9809933	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009566.1	-1	validated	p.E230K	0.998	384	0%	230	40.9%	55	47.2%	possibly_damaging(0.501)	deleterious(0.05)	deleterious(0.513)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
UBE4B	10277	genome.wustl.edu	37	1	10190865	10190865	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105562.1	+1	reviewed	p.L635	0.931	222	0%	133	39.8%	12	33.3%	-	-	-	HMMPfam_Ufd2P_core
KIF1B	23095	genome.wustl.edu	37	1	10357069	10357069	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015074.3	+1	reviewed	p.W613L	1.000	64	0%	34	32.4%	9	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIF1B	23095	genome.wustl.edu	37	1	10405951	10405951	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015074.3	+1	reviewed	p.S1200N	1.000	195	0%	67	44.8%	4	75%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
CASZ1	54897	genome.wustl.edu	37	1	10713947	10713947	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079843.1	-1	validated	p.D723N	1.000	18	5.6%	19	52.6%	11	27.2%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
C1orf127	148345	genome.wustl.edu	37	1	11008555	11008555	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377008	-1	known	p.T379N	0.000	12	0%	15	46.7%	0	-	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	NULL
C1orf127	148345	genome.wustl.edu	37	1	11024203	11024203	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377008	-1	known	p.C17	0.000	91	0%	86	60.5%	0	-	-	-	-	NULL
MASP2	10747	genome.wustl.edu	37	1	11097840	11097840	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006610.2	-1	reviewed	p.P306	1.000	84	0%	65	32.3%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
MASP2	10747	genome.wustl.edu	37	1	11103401	11103401	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006610.2	-1	reviewed	p.L246I	0.999	18	0%	13	53.8%	0	-	benign(0.081)	tolerated(0.45)	neutral(0.018)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
MASP2	10747	genome.wustl.edu	37	1	11106969	11106969	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006610.2	-1	reviewed	p.L71	0.929	11	0%	19	31.6%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
MTOR	2475	genome.wustl.edu	37	1	11187730	11187730	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004958.3	-1	reviewed	p.A2056V	1.000	116	0%	91	50.5%	15	40%	benign(0.373)	deleterious(0.04)	neutral(0.468)	HMMPfam_Rapamycin_bind,superfamily_FRAP_FKBP12_bind,superfamily_ARM-type_fold
MTOR	2475	genome.wustl.edu	37	1	11199365	11199365	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004958.3	-1	reviewed	p.R1709H	1.000	92	2.2%	52	51.9%	26	42.3%	possibly_damaging(0.863)	tolerated(0.33)	neutral(0.358)	HMMPfam_FAT,superfamily_ARM-type_fold
MTOR	2475	genome.wustl.edu	37	1	11227539	11227539	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004958.3	-1	reviewed	p.A1430V	0.966	183	0%	113	23%	13	15.3%	benign(0.001)	tolerated(0.52)	neutral(0.009)	superfamily_ARM-type_fold,superfamily_SSF48452
MTOR	2475	genome.wustl.edu	37	1	11301713	11301713	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004958.3	-1	reviewed	p.A480T	1.000	39	0%	21	23.8%	9	11.1%	benign(0.009)	tolerated(0.1)	neutral(0.287)	superfamily_ARM-type_fold
MTOR	2475	genome.wustl.edu	37	1	11318549	11318549	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004958.3	-1	reviewed	p.L88	1.000	157	0%	94	34%	5	40%	-	-	-	superfamily_ARM-type_fold
PTCHD2	57540	genome.wustl.edu	37	1	11561154	11561154	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020780.1	+1	validated	p.G35	0.000	28	0%	29	55.2%	0	-	-	-	-	NULL
PTCHD2	57540	genome.wustl.edu	37	1	11590007	11590007	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020780.1	+1	validated	p.I1031	0.555	13	0%	37	54.1%	1	0%	-	-	-	HMMPfam_Patched
MTHFR	4524	genome.wustl.edu	37	1	11861383	11861383	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005957.4	-1	reviewed	p.D104Y	1.000	29	0%	32	12.5%	12	0%	probably_damaging(0.986)	deleterious(0.04)	deleterious(0.783)	HMMPfam_MTHFR,superfamily_FAD-linked oxidoreductase
CLCN6	1185	genome.wustl.edu	37	1	11882784	11882784	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001286.2	+1	reviewed	p.A127T	0.920	165	0%	93	43%	6	50%	possibly_damaging(0.736)	tolerated(0.22)	neutral(0.311)	superfamily_Clc chloride channel
KIAA2013	90231	genome.wustl.edu	37	1	11982671	11982671	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000376576	-1	known	p.E637K	0.000	18	0%	35	37.1%	10	30%	unknown(0)	-	-	NULL
PLOD1	5351	genome.wustl.edu	37	1	12030790	12030790	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000302.2	+1	reviewed	p.G607S	0.344	45	0%	39	53.8%	333	45.3%	unknown(0)	tolerated(0.09)	-	HMMSmart_P4Hc
VPS13D	55187	genome.wustl.edu	37	1	12320762	12320762	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015378.2	+1	reviewed	p.R375W	1.000	104	0%	59	42.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
VPS13D	55187	genome.wustl.edu	37	1	12326994	12326994	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015378.2	+1	reviewed	p.R551W	0.992	235	0%	102	44.1%	4	50%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	NULL
VPS13D	55187	genome.wustl.edu	37	1	12415991	12415991	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015378.2	+1	reviewed	p.L3239V	1.000	158	0%	80	37.5%	10	40%	benign(0.213)	tolerated(0.31)	neutral(0.048)	NULL
PRAMEF11	440560	genome.wustl.edu	37	1	12888616	12888616	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342032.1	-1	model	p.L46	0.032	59	0%	52	36.5%	0	-	-	-	-	NULL
PRAMEF2	65122	genome.wustl.edu	37	1	12921097	12921097	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023014.1	+1	provisional	p.E296D	0.277	123	0.8%	86	44.2%	0	-	possibly_damaging(0.719)	tolerated(0.18)	neutral(0.317)	superfamily_SSF52047
PRAMEF4	400735	genome.wustl.edu	37	1	12939696	12939696	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009611.2	-1	validated	p.V369G	0.000	155	0%	89	34.8%	0	-	possibly_damaging(0.517)	deleterious(0)	deleterious(0.619)	superfamily_SSF52047
PRAMEF7	441871	genome.wustl.edu	37	1	12979895	12979895	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012277.1	+1	provisional	p.S363T	0.116	47	0%	41	17.1%	0	-	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	superfamily_RNI-like
PRAMEF18	391003	genome.wustl.edu	37	1	13475213	13475213	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099850.1	-1	validated	p.D306N	0.000	134	0%	76	36.8%	0	-	benign(0)	tolerated(0.08)	neutral(0.300)	superfamily_SSF52047
PDPN	10630	genome.wustl.edu	37	1	13940852	13940852	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006474.4	+1	reviewed	p.G219D	0.091	436	0%	213	50.7%	0	-	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_Podoplanin
PDPN	10630	genome.wustl.edu	37	1	13940894	13940894	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006474.4	+1	reviewed	p.S233L	0.997	351	0%	176	39.8%	2	0%	benign(0.202)	deleterious(0)	neutral(0.464)	HMMPfam_Podoplanin
PRDM2	7799	genome.wustl.edu	37	1	14106215	14106215	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012231.4	+1	reviewed	p.A642V	0.068	90	0%	56	44.6%	11	72.7%	unknown(0)	tolerated(0.05)	-	NULL
PRDM2	7799	genome.wustl.edu	37	1	14107528	14107528	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012231.4	+1	reviewed	p.A1080T	0.992	77	0%	40	47.5%	18	72.2%	unknown(0)	tolerated(0.08)	-	NULL
TMEM51	55092	genome.wustl.edu	37	1	15546172	15546172	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136216.1	+1	validated	p.P232H	0.999	52	0%	38	36.8%	16	56.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FHAD1	114827	genome.wustl.edu	37	1	15687168	15687168	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444385	+1	known	p.A274V	0.049	103	0%	68	44.1%	0	-	-	-	-	NULL
DNAJC16	23341	genome.wustl.edu	37	1	15863090	15863090	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015291.2	+1	provisional	p.F119V	1.000	228	0%	116	37.9%	5	20%	probably_damaging(1)	tolerated(0.21)	deleterious(0.544)	superfamily_Chaperone J-domain
LOC645317	645317	genome.wustl.edu	37	1	15931516	15931516	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_934920.4	+1	model	p.R178Q	0.978	145	0%	74	20.3%	25	0%	-	-	-	HMMPfam_CHCH
PLEKHM2	23207	genome.wustl.edu	37	1	16043304	16043304	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015164.2	+1	validated	p.L90	1.000	27	0%	36	50%	52	36.5%	-	-	-	HMMPfam_RUN
PLEKHM2	23207	genome.wustl.edu	37	1	16058909	16058909	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015164.2	+1	validated	p.R897H	1.000	21	0%	14	42.9%	99	54.5%	possibly_damaging(0.933)	tolerated(0.62)	neutral(0.383)	NULL
UQCRHL	440567	genome.wustl.edu	37	1	16133950	16133950	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001089591.1	-1	provisional	p.E65D	1.000	160	0%	94	44.7%	3	0%	-	-	-	HMMPfam_UCR_hinge,superfamily_Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SPEN	23013	genome.wustl.edu	37	1	16256224	16256224	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015001.2	+1	reviewed	p.I1163	1.000	52	0%	35	51.4%	9	44.4%	-	-	-	NULL
SPEN	23013	genome.wustl.edu	37	1	16256788	16256788	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015001.2	+1	reviewed	p.F1351	0.903	47	0%	31	48.4%	9	33.3%	-	-	-	NULL
SPEN	23013	genome.wustl.edu	37	1	16257804	16257804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015001.2	+1	reviewed	p.A1690D	0.693	31	0%	29	62.1%	11	63.6%	probably_damaging(0.988)	deleterious(0.04)	deleterious(0.786)	NULL
SPEN	23013	genome.wustl.edu	37	1	16257895	16257895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015001.2	+1	reviewed	p.E1720D	0.063	19	0%	25	32%	17	41.1%	possibly_damaging(0.63)	tolerated(0.06)	deleterious(0.542)	NULL
SPEN	23013	genome.wustl.edu	37	1	16258976	16258976	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015001.2	+1	reviewed	p.R2081*	0.867	123	0%	67	35.8%	9	11.1%	-	-	-	NULL
SPEN	23013	genome.wustl.edu	37	1	16261368	16261368	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015001.2	+1	reviewed	p.A2878V	0.997	52	0%	37	59.5%	43	39.5%	unknown(0)	deleterious(0.01)	-	NULL
ZBTB17	7709	genome.wustl.edu	37	1	16270923	16270923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003443.2	-1	validated	p.E415K	1.000	29	0%	29	13.8%	33	6%	benign(0.021)	deleterious(0.01)	neutral(0.407)	superfamily_C2H2 and C2HC zinc fingers
ZBTB17	7709	genome.wustl.edu	37	1	16274938	16274938	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003443.2	-1	validated	p.R18Q	1.000	11	0%	20	65%	19	47.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_POZ domain,HMMPfam_BTB
FBXO42	54455	genome.wustl.edu	37	1	16641780	16641780	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018994.1	-1	provisional	p.R45M	1.000	130	0%	104	35.6%	20	35%	possibly_damaging(0.66)	deleterious(0)	deleterious(0.677)	HMMPfam_F-box,superfamily_SSF81383
NBPF1	55672	genome.wustl.edu	37	1	16913705	16913705	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017940.3	-1	predicted	p.E206	0.009	1153	0.1%	601	13.3%	6	16.6%	-	-	-	HMMPfam_DUF1220
MST1P9	11223	genome.wustl.edu	37	1	17086978	17086978	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_002729.2	-1	validated	NULL	1.000	56	0%	67	17.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	-
CROCC	9696	genome.wustl.edu	37	1	17264209	17264209	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014675.3	+1	validated	p.L423I	0.994	36	0%	27	33.3%	1	0%	unknown(0)	tolerated(0.1)	-	NULL
CROCC	9696	genome.wustl.edu	37	1	17292364	17292364	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014675.3	+1	validated	p.L1518M	1.000	11	0%	15	46.7%	9	55.5%	probably_damaging(0.967)	tolerated(0.06)	deleterious(0.732)	NULL
PADI3	51702	genome.wustl.edu	37	1	17596790	17596790	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016233.2	+1	reviewed	p.V239I	1.000	42	0%	27	51.9%	1	0%	possibly_damaging(0.646)	tolerated(0.18)	neutral(0.283)	HMMPfam_PAD_M,superfamily_PAD_central
IGSF21	84966	genome.wustl.edu	37	1	18691814	18691814	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032880.3	+1	validated	p.R213H	1.000	8	0.000	6	0.667	2	0%	probably_damaging(0.998)	tolerated(0.17)	deleterious(0.533)	superfamily_SSF48726
PAX7	5081	genome.wustl.edu	37	1	18962813	18962813	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002584.2	+1	reviewed	p.D178	0.706	139	0%	119	42.9%	0	-	-	-	-	NULL
TAS1R2	80834	genome.wustl.edu	37	1	19181133	19181133	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152232.2	-1	validated	p.P277	0.121	8	0.000	21	0.524	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_SSF53822
UBR4	23352	genome.wustl.edu	37	1	19430640	19430640	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020765.2	-1	validated	p.R4280M	1.000	63	0%	41	17.1%	39	30.7%	possibly_damaging(0.834)	deleterious(0)	deleterious(0.762)	superfamily_ARM repeat
UBR4	23352	genome.wustl.edu	37	1	19478836	19478836	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020765.2	-1	validated	p.S2323P	1.000	215	0%	114	44.7%	27	44.4%	probably_damaging(0.959)	deleterious(0.01)	deleterious(0.808)	superfamily_ARM repeat
UBR4	23352	genome.wustl.edu	37	1	19490786	19490786	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020765.2	-1	validated	p.L1554R	1.000	49	0%	37	32.4%	11	27.2%	benign(0.227)	tolerated(0.15)	neutral(0.264)	superfamily_ARM repeat
KIAA0090	23065	genome.wustl.edu	37	1	19571414	19571414	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015047.1	-1	predicted	p.R69Q	1.000	175	1.1%	109	45%	21	52.3%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Quinoprotein alcohol dehydrogenase-like
PQLC2	54896	genome.wustl.edu	37	1	19651999	19651999	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040125.1	+1	validated	p.A102V	0.989	30	0%	34	32.4%	21	42.8%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	NULL
MUL1	79594	genome.wustl.edu	37	1	20834457	20834457	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024544.2	-1	validated	p.V21I	1.000	4	0.000	10	0.500	15	66.6%	benign(0.001)	tolerated(0.58)	neutral(0.005)	NULL
KIF17	57576	genome.wustl.edu	37	1	20992706	20992706	+	Splice_Site	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020816.2	-1	validated	e14+1	1.000	35	0%	41	31.7%	0	-	-	-	-	-
KIF17	57576	genome.wustl.edu	37	1	21036292	21036292	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020816.2	-1	validated	p.Y170	1.000	20	0%	12	41.7%	0	-	-	-	-	HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540
KIF17	57576	genome.wustl.edu	37	1	21036294	21036294	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020816.2	-1	validated	p.Y170H	1.000	20	0%	13	46.2%	0	-	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540
EIF4G3	8672	genome.wustl.edu	37	1	21188793	21188793	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003760.3	-1	validated	p.E957D	1.000	489	0%	254	46.1%	20	45%	possibly_damaging(0.882)	tolerated(0.32)	neutral(0.368)	HMMPfam_MIF4G,HMMSmart_SM00543,superfamily_ARM repeat
EIF4G3	8672	genome.wustl.edu	37	1	21268299	21268299	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003760.3	-1	validated	p.P394S	0.974	156	0.6%	79	36.7%	24	45.8%	benign(0.418)	tolerated(0.6)	neutral(0.140)	NULL
USP48	84196	genome.wustl.edu	37	1	22041894	22041894	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032236.5	-1	reviewed	p.L651M	1.000	281	0%	80	48.7%	32	34.3%	benign(0.179)	deleterious(0.01)	neutral(0.422)	NULL
USP48	84196	genome.wustl.edu	37	1	22079605	22079605	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032236.5	-1	reviewed	p.E140D	0.993	161	0%	71	40.8%	18	55.5%	possibly_damaging(0.95)	tolerated(0.11)	deleterious(0.665)	HMMPfam_UCH,superfamily_Cysteine proteinases
HSPG2	3339	genome.wustl.edu	37	1	22207901	22207901	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005529.5	-1	reviewed	p.R563*	0.997	22	0%	37	24.3%	22	18.1%	-	-	-	NULL
HSPG2	3339	genome.wustl.edu	37	1	22216971	22216971	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000374695	-1	known	p.S121L	1.000	88	0%	75	24%	14	7.1%	benign(0.156)	tolerated(0.08)	neutral(0.314)	HMMPfam_SEA,HMMSmart_SM00200
CELA3A	10136	genome.wustl.edu	37	1	22329496	22329496	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005747.4	+1	reviewed	p.A15D	0.998	73	0%	67	35.8%	0	-	unknown(0)	deleterious(0)	-	NULL
ZBTB40	9923	genome.wustl.edu	37	1	22816927	22816927	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000374649	+1	known	e2-1	0.000	34	0%	27	29.6%	1	100%	-	-	-	-
ZBTB40	9923	genome.wustl.edu	37	1	22838340	22838340	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083621.1	+1	validated	p.A725V	0.001	43	0%	37	16.2%	5	20%	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
C1QC	714	genome.wustl.edu	37	1	22973879	22973879	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114101.1	+1	reviewed	p.Y114C	0.945	32	0%	23	43.5%	56	0%	possibly_damaging(0.918)	tolerated(0.07)	deleterious(0.688)	HMMSmart_C1Q
EPHB2	2048	genome.wustl.edu	37	1	23234500	23234500	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004442.6	+1	reviewed	p.A732T	1.000	84	0%	78	35.9%	18	44.4%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
EPHB2	2048	genome.wustl.edu	37	1	23234628	23234628	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004442.6	+1	reviewed	p.D774	0.804	41	2.4%	53	11.3%	14	14.2%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
KDM1A	23028	genome.wustl.edu	37	1	23409681	23409681	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015013.3	+1	reviewed	p.R795*	1.000	104	0%	50	12%	167	7.7%	-	-	-	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain
LUZP1	7798	genome.wustl.edu	37	1	23418002	23418002	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142546.1	-1	reviewed	p.V918A	0.943	75	0%	50	32%	6	66.6%	possibly_damaging(0.624)	deleterious(0)	deleterious(0.662)	NULL
HTR1D	3352	genome.wustl.edu	37	1	23519776	23519776	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000864.4	-1	validated	p.C313R	1.000	60	0%	45	44.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
HTR1D	3352	genome.wustl.edu	37	1	23520605	23520605	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000864.4	-1	validated	p.A36	0.249	115	0%	90	45.6%	0	-	-	-	-	superfamily_SSF81321
ZNF436	80818	genome.wustl.edu	37	1	23688917	23688917	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077195.1	-1	validated	p.D320N	0.805	87	0%	62	21%	15	6.6%	benign(0.07)	tolerated(0.31)	neutral(0.032)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ASAP3	55616	genome.wustl.edu	37	1	23758259	23758259	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017707.3	-1	reviewed	p.P826S	0.002	40	0%	31	12.9%	16	6.2%	benign(0.001)	tolerated(0.38)	neutral(0.018)	NULL
ASAP3	55616	genome.wustl.edu	37	1	23761083	23761083	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017707.3	-1	reviewed	p.A593D	0.999	62	0%	60	21.7%	9	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
RPL11	6135	genome.wustl.edu	37	1	24019129	24019129	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000975.2	+1	reviewed	p.R13W	1.000	26	0%	23	39.1%	1156	44.6%	benign(0.011)	deleterious(0.02)	neutral(0.384)	HMMPfam_Ribosomal_L5,superfamily_Ribosomal protein L5
TCEB3	6924	genome.wustl.edu	37	1	24075566	24075566	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003198.2	+1	reviewed	p.A70V	1.000	373	0.3%	183	42.1%	12	50%	benign(0)	tolerated(1)	-	HMMSmart_SM00509,HMMPfam_TFIIS,superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70
LYPLA2	11313	genome.wustl.edu	37	1	24121035	24121035	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007260.2	+1	reviewed	p.P197L	1.000	24	0%	25	48%	135	52.5%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_Abhydrolase_2,superfamily_SSF53474
MYOM3	127294	genome.wustl.edu	37	1	24433626	24433626	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152372.3	-1	validated	p.I113	0.000	14	0%	18	55.6%	0	-	-	-	-	NULL
IL22RA1	58985	genome.wustl.edu	37	1	24448177	24448177	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021258.2	-1	reviewed	p.H281	0.078	20	0%	13	53.8%	2	0%	-	-	-	NULL
TMEM57	55219	genome.wustl.edu	37	1	25783205	25783205	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018202.4	+1	validated	p.R179W	1.000	132	0%	56	26.8%	12	41.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Macoilin
TMEM57	55219	genome.wustl.edu	37	1	25824864	25824864	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018202.4	+1	validated	p.S634	1.000	84	0%	51	45.1%	56	50%	-	-	-	HMMPfam_Macoilin
STMN1	3925	genome.wustl.edu	37	1	26230230	26230230	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145454.1	-1	reviewed	p.E30*	1.000	234	0%	154	45.5%	252	26.9%	-	-	-	HMMPfam_Stathmin,superfamily_Stathmin
SLC30A2	7780	genome.wustl.edu	37	1	26371500	26371500	+	Missense_Mutation	SNP	C	C	T	rs185398527	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004434.1	-1	validated	p.G87R	1.000	51	0%	46	43.5%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Cation_efflux
AIM1L	55057	genome.wustl.edu	37	1	26648760	26648760	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000475866	-1	known	NULL	1.000	28	0%	27	40.7%	1	100%	benign(0.231)	tolerated(0.47)	neutral(0.034)	-
ARID1A	8289	genome.wustl.edu	37	1	27097680	27097680	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006015.4	+1	reviewed	p.S1090I	1.000	77	0%	61	49.2%	26	61.5%	probably_damaging(0.956)	tolerated(0.12)	deleterious(0.660)	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like
ARID1A	8289	genome.wustl.edu	37	1	27099014	27099014	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006015.4	+1	reviewed	p.P1144S	1.000	80	0%	62	46.8%	39	61.5%	probably_damaging(0.98)	tolerated(0.4)	neutral(0.440)	NULL
ARID1A	8289	genome.wustl.edu	37	1	27105553	27105553	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006015.4	+1	reviewed	p.R1722*	1.000	119	0%	79	36.7%	36	30.5%	-	-	-	NULL
ARID1A	8289	genome.wustl.edu	37	1	27106288	27106288	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006015.4	+1	reviewed	p.L1967	1.000	48	0%	51	35.3%	90	50%	-	-	-	NULL
ARID1A	8289	genome.wustl.edu	37	1	27106354	27106354	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006015.4	+1	reviewed	p.R1989*	1.000	50	0%	66	28.8%	67	17.9%	-	-	-	NULL
GPN2	54707	genome.wustl.edu	37	1	27210750	27210750	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018066.3	-1	validated	p.A254D	1.000	45	0%	40	45%	28	60.7%	possibly_damaging(0.908)	tolerated(0.15)	deleterious(0.603)	HMMPfam_ATP_bind_1,superfamily_SSF52540
NUDC	10726	genome.wustl.edu	37	1	27267969	27267969	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006600.2	+1	provisional	p.H61N	1.000	53	0%	51	41.2%	170	47%	benign(0.177)	tolerated(0.06)	neutral(0.339)	NULL
LOC646567	646567	genome.wustl.edu	37	1	27312826	27312826	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_929503.3	-1	model	p.E2D	1.000	34	0%	15	53.3%	0	-	-	-	-	HMMPfam_DUF2055
SLC9A1	6548	genome.wustl.edu	37	1	27429001	27429001	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003047.3	-1	validated	p.G565	0.373	11	0%	20	45%	22	50%	-	-	-	NULL
WDTC1	23038	genome.wustl.edu	37	1	27624477	27624477	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015023.3	+1	validated	p.A368	1.000	39	0%	38	39.5%	47	46.8%	-	-	-	superfamily_WD40 repeat-like,HMMSmart_SM00028,superfamily_TPR-like
MAP3K6	9064	genome.wustl.edu	37	1	27687421	27687421	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004672.3	-1	reviewed	p.E637D	1.000	7	0.000	7	0.571	16	43.7%	benign(0.022)	tolerated(1)	neutral(0.001)	NULL
WASF2	10163	genome.wustl.edu	37	1	27742577	27742577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006990.2	-1	reviewed	p.L147F	1.000	281	0%	175	36.6%	24	50%	unknown(0)	deleterious(0)	-	NULL
AHDC1	27245	genome.wustl.edu	37	1	27876988	27876988	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029882.2	-1	validated	p.R547C	1.000	11	0%	16	25%	23	34.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_AT_hook,HMMSmart_AT_hook
FGR	2268	genome.wustl.edu	37	1	27949614	27949614	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042729.1	-1	reviewed	p.A90T	1.000	102	0%	89	49.4%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3
IFI6	2537	genome.wustl.edu	37	1	27992977	27992977	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022873.2	-1	reviewed	p.G111D	0.007	30	0%	36	44.4%	42	35.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ifi-6-16
IFI6	2537	genome.wustl.edu	37	1	27995032	27995032	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022873.2	-1	reviewed	p.S37P	0.003	10	0%	12	66.7%	33	30.3%	possibly_damaging(0.488)	tolerated(0.14)	neutral(0.412)	NULL
C1orf38	9473	genome.wustl.edu	37	1	28209047	28209047	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105556.1	+1	validated	p.E404D	0.732	25	0%	15	40%	10	40%	probably_damaging(0.974)	tolerated(0.4)	neutral(0.432)	NULL
RPA2	6118	genome.wustl.edu	37	1	28220834	28220834	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002946.3	-1	provisional	p.M200I	0.402	263	0%	165	45.5%	48	31.2%	benign(0.005)	tolerated(0.48)	neutral(0.011)	HMMPfam_RPA_C
EYA3	2140	genome.wustl.edu	37	1	28330930	28330930	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001990.2	-1	reviewed	p.R304W	1.000	180	0.6%	67	64.2%	11	54.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hydrolase
ATPIF1	93974	genome.wustl.edu	37	1	28562920	28562920	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016311.3	+1	reviewed	p.A46S	1.000	20	0%	17	29.4%	597	43.7%	possibly_damaging(0.791)	deleterious(0)	deleterious(0.741)	HMMPfam_IATP
PHACTR4	65979	genome.wustl.edu	37	1	28802770	28802770	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023923.3	+1	reviewed	p.R535*	1.000	248	0%	112	47.3%	10	30%	-	-	-	NULL
PHACTR4	65979	genome.wustl.edu	37	1	28817495	28817495	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023923.3	+1	reviewed	p.R627*	1.000	166	0%	101	38.6%	2	0%	-	-	-	NULL
RCC1	1104	genome.wustl.edu	37	1	28862534	28862534	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001048194.1	+1	validated	p.Q302H	1.000	34	0%	36	58.3%	101	45.5%	possibly_damaging(0.577)	deleterious(0)	deleterious(0.643)	HMMPfam_RCC1,superfamily_RCC1/BLIP-II
TRNAU1AP	54952	genome.wustl.edu	37	1	28897780	28897780	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017846.4	+1	validated	p.G208D	1.000	153	0%	120	45%	35	51.4%	possibly_damaging(0.88)	tolerated(0.13)	deleterious(0.596)	NULL
PTPRU	10076	genome.wustl.edu	37	1	29651769	29651769	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005704.3	+1	reviewed	p.H1403	1.000	30	0%	35	48.6%	39	38.4%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PUM1	9698	genome.wustl.edu	37	1	31439034	31439034	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001020658.1	-1	reviewed	p.Q627H	1.000	100	0%	71	40.8%	61	42.6%	probably_damaging(0.996)	tolerated(0.13)	deleterious(0.714)	NULL
PUM1	9698	genome.wustl.edu	37	1	31465506	31465506	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001020658.1	-1	reviewed	p.R297C	1.000	49	0%	39	41%	27	40.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SNRNP40	9410	genome.wustl.edu	37	1	31754247	31754247	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004814.2	-1	reviewed	p.S210A	1.000	231	0%	118	46.6%	46	45.6%	probably_damaging(0.979)	tolerated(0.24)	neutral(0.459)	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40
FABP3	2170	genome.wustl.edu	37	1	31845852	31845852	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004102.3	-1	reviewed	p.A4T	1.000	35	0%	25	28%	7	57.1%	benign(0.001)	tolerated(0.27)	neutral(0.034)	superfamily_Lipocalins
BAI2	576	genome.wustl.edu	37	1	32196963	32196963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001703.2	-1	reviewed	p.R1273H	1.000	8	0.000	7	0.571	32	46.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SPOCD1	90853	genome.wustl.edu	37	1	32263873	32263873	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144569.4	-1	provisional	p.R694W	0.999	13	0%	28	28.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_TFIIS_M,superfamily_Elongation factor TFIIS domain 2,HMMSmart_SM00510
PTP4A2	8073	genome.wustl.edu	37	1	32384657	32384657	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080391.2	-1	reviewed	p.P4S	1.000	238	0%	140	20%	78	29.4%	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	HMMPfam_Y_phosphatase
KHDRBS1	10657	genome.wustl.edu	37	1	32508161	32508161	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006559.1	+1	provisional	p.L423P	1.000	98	0%	57	43.9%	207	50.2%	possibly_damaging(0.797)	deleterious(0.02)	deleterious(0.682)	NULL
TMEM39B	55116	genome.wustl.edu	37	1	32542422	32542422	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018056.2	+1	validated	p.R137H	1.000	54	0%	61	42.6%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tmp39
TMEM39B	55116	genome.wustl.edu	37	1	32542858	32542858	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018056.2	+1	validated	p.R177*	1.000	90	0%	84	44%	15	73.3%	-	-	-	HMMPfam_Tmp39
TMEM39B	55116	genome.wustl.edu	37	1	32568068	32568068	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018056.2	+1	validated	p.L425I	1.000	63	0%	68	10.3%	32	6.2%	probably_damaging(0.971)	deleterious(0.01)	deleterious(0.819)	HMMPfam_Tmp39
IQCC	55721	genome.wustl.edu	37	1	32672608	32672608	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018134.2	+1	validated	p.T149A	0.003	25	0%	25	36%	6	16.6%	benign(0.005)	tolerated(1)	-	NULL
BSDC1	55108	genome.wustl.edu	37	1	32832108	32832108	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441541	-1	known	p.S161R	0.892	4	0.000	9	0.444	40	50%	unknown(0)	tolerated(0.07)	-	NULL
BSDC1	55108	genome.wustl.edu	37	1	32841954	32841954	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143888.1	-1	validated	p.E372	1.000	27	0%	43	14%	33	9%	-	-	-	NULL
YARS	8565	genome.wustl.edu	37	1	33252565	33252565	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003680.3	-1	reviewed	p.H266Y	1.000	188	0%	89	31.5%	41	0%	benign(0.025)	tolerated(0.81)	neutral(0.002)	HMMPfam_tRNA-synt_1b,superfamily_Nucleotidylyl transferase
ADC	113451	genome.wustl.edu	37	1	33557722	33557722	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052998.2	+1	validated	p.Q117	0.995	39	0%	22	27.3%	6	50%	-	-	-	HMMPfam_Orn_Arg_deC_N,superfamily_PLP-binding barrel
ZNF362	149076	genome.wustl.edu	37	1	33760790	33760790	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152493.2	+1	validated	p.P344S	1.000	27	0%	35	42.9%	37	45.9%	benign(0.001)	tolerated(0.77)	neutral(0.001)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZSCAN20	7579	genome.wustl.edu	37	1	33954791	33954791	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145238.3	+1	validated	p.Q227H	1.000	189	0%	123	50.4%	0	-	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	NULL
ZSCAN20	7579	genome.wustl.edu	37	1	33956766	33956766	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145238.3	+1	validated	p.R303M	0.586	70	0%	36	33.3%	2	0%	benign(0.404)	deleterious(0.01)	deleterious(0.536)	NULL
ZSCAN20	7579	genome.wustl.edu	37	1	33958865	33958865	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145238.3	+1	validated	p.R508H	1.000	14	0%	10	40%	1	100%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMSmart_SM00717
CSMD2	114784	genome.wustl.edu	37	1	34049249	34049249	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052896.3	-1	validated	p.I2413M	0.997	87	0%	44	31.8%	0	-	probably_damaging(0.974)	deleterious(0.03)	deleterious(0.780)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD2	114784	genome.wustl.edu	37	1	34071031	34071031	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052896.3	-1	validated	p.A2130V	1.000	59	0%	36	36.1%	0	-	benign(0.146)	tolerated(0.32)	neutral(0.037)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD2	114784	genome.wustl.edu	37	1	34189816	34189816	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052896.3	-1	validated	p.I954	0.618	48	0%	38	28.9%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD2	114784	genome.wustl.edu	37	1	34208962	34208962	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052896.3	-1	validated	p.T658A	1.000	18	0%	25	48%	0	-	benign(0.076)	tolerated(0.54)	neutral(0.013)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD2	114784	genome.wustl.edu	37	1	34291302	34291302	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052896.3	-1	validated	p.S329	0.898	33	0%	23	34.8%	0	-	-	-	-	NULL
CSMD2	114784	genome.wustl.edu	37	1	34554660	34554660	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052896.3	-1	validated	p.F68L	1.000	57	0%	31	45.2%	0	-	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
C1orf94	84970	genome.wustl.edu	37	1	34643643	34643643	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134734.1	+1	validated	p.S85P	0.005	49	0%	36	41.7%	0	-	probably_damaging(0.96)	deleterious(0)	deleterious(0.848)	NULL
GJB5	2709	genome.wustl.edu	37	1	35223351	35223351	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005268.2	+1	provisional	p.S140	0.000	32	0%	26	50%	1	100%	-	-	-	NULL
GJB4	127534	genome.wustl.edu	37	1	35227540	35227540	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153212.2	+1	reviewed	p.C229R	0.000	7	0.000	15	0.467	1	0%	benign(0)	tolerated(0.41)	neutral(0.015)	NULL
GJB3	2707	genome.wustl.edu	37	1	35250487	35250487	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005752.1	+1	reviewed	p.R42C	0.977	60	0%	69	13%	3	0%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_Connexin,HMMSmart_SM00037
DLGAP3	58512	genome.wustl.edu	37	1	35365778	35365778	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080418.1	-1	provisional	p.G402W	1.000	30	0%	39	35.9%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZMYM6	9204	genome.wustl.edu	37	1	35452887	35452887	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007167.3	-1	validated	p.E1266*	1.000	276	0%	161	41.6%	12	58.3%	-	-	-	NULL
ZMYM6	9204	genome.wustl.edu	37	1	35477599	35477599	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007167.3	-1	validated	p.Q318	0.992	192	0%	98	45.9%	5	80%	-	-	-	HMMPfam_zf-FCS
ZMYM1	79830	genome.wustl.edu	37	1	35579446	35579446	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024772.3	+1	validated	p.A672D	0.177	135	0%	79	39.2%	4	25%	possibly_damaging(0.604)	deleterious(0)	deleterious(0.654)	NULL
ZMYM1	79830	genome.wustl.edu	37	1	35580497	35580497	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024772.3	+1	validated	p.D1022	0.995	170	0%	115	40.9%	1	0%	-	-	-	NULL
ZMYM4	9202	genome.wustl.edu	37	1	35859336	35859336	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000457946	+1	known	p.D629N	1.000	218	0%	115	34.8%	30	56.6%	-	-	-	NULL
ZMYM4	9202	genome.wustl.edu	37	1	35885275	35885275	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005095.2	+1	validated	p.D1548	1.000	99	0%	59	30.5%	34	50%	-	-	-	NULL
KIAA0319L	79932	genome.wustl.edu	37	1	35913814	35913814	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024874.4	-1	reviewed	p.D825N	1.000	124	0%	63	47.6%	23	34.7%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	NULL
KIAA0319L	79932	genome.wustl.edu	37	1	35926033	35926033	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024874.4	-1	reviewed	p.T434A	1.000	545	0%	237	40.5%	17	47%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00089,superfamily_PKD domain
NCDN	23154	genome.wustl.edu	37	1	36030896	36030896	+	Missense_Mutation	SNP	G	G	A	rs147694879	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014839.1	+1	reviewed	p.V608M	1.000	23	0%	21	28.6%	28	46.4%	possibly_damaging(0.906)	tolerated(0.08)	deleterious(0.659)	HMMPfam_Neurochondrin
EIF2C4	192670	genome.wustl.edu	37	1	36301436	36301436	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017629.2	+1	reviewed	p.A522	0.979	114	0%	70	11.4%	7	14.2%	-	-	-	HMMPfam_Piwi,superfamily_Ribonuclease H-like
EIF2C3	192669	genome.wustl.edu	37	1	36432660	36432660	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024852.2	+1	reviewed	p.P99L	1.000	171	0%	90	35.6%	4	50%	possibly_damaging(0.764)	deleterious(0.04)	deleterious(0.632)	NULL
TRAPPC3	27095	genome.wustl.edu	37	1	36603481	36603481	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014408.3	-1	provisional	p.V113	1.000	123	0%	83	39.8%	58	48.2%	-	-	-	HMMPfam_TRAPP
MAP7D1	55700	genome.wustl.edu	37	1	36639028	36639028	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018067.3	+1	provisional	p.R230C	1.000	20	0%	24	41.7%	56	53.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
THRAP3	9967	genome.wustl.edu	37	1	36748268	36748268	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005119.3	+1	validated	p.R35Q	1.000	93	1.1%	72	51.4%	33	27.2%	unknown(0)	deleterious(0)	-	NULL
THRAP3	9967	genome.wustl.edu	37	1	36755145	36755145	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005119.3	+1	validated	p.E509K	0.894	107	0%	51	49%	52	36.5%	possibly_damaging(0.918)	deleterious(0.01)	deleterious(0.774)	NULL
LSM10	84967	genome.wustl.edu	37	1	36859492	36859492	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032881.1	-1	provisional	p.R80H	1.000	33	3%	39	17.9%	89	3.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_LSM,superfamily_Sm_like_riboprot
GRIK3	2899	genome.wustl.edu	37	1	37267613	37267613	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000831.3	-1	reviewed	p.R867C	1.000	17	0%	22	63.6%	0	-	possibly_damaging(0.836)	tolerated(0.06)	deleterious(0.642)	superfamily_SSF55620
GRIK3	2899	genome.wustl.edu	37	1	37271815	37271815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000831.3	-1	reviewed	p.A735V	1.000	37	0%	24	37.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850
GNL2	29889	genome.wustl.edu	37	1	38032536	38032536	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013285.2	-1	validated	p.N706H	1.000	686	0%	335	38.2%	88	45.4%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
GNL2	29889	genome.wustl.edu	37	1	38042154	38042154	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013285.2	-1	validated	p.H305Y	1.000	220	0%	138	45.7%	47	55.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
EPHA10	284656	genome.wustl.edu	37	1	38186159	38186159	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099439.1	-1	validated	p.K759T	1.000	9	0.000	6	0.667	0	-	probably_damaging(0.977)	tolerated(0.06)	deleterious(0.742)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
MANEAL	149175	genome.wustl.edu	37	1	38261468	38261468	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113482.1	+1	validated	p.D204Y	1.000	44	0%	37	43.2%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
MTF1	4520	genome.wustl.edu	37	1	38281154	38281154	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005955.2	-1	reviewed	p.R639Q	1.000	18	0%	19	63.2%	7	57.1%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
INPP5B	3633	genome.wustl.edu	37	1	38343888	38343888	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005540.2	-1	reviewed	p.K550T	1.000	46	0%	40	42.5%	6	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like
SF3A3	10946	genome.wustl.edu	37	1	38444393	38444393	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006802.2	-1	reviewed	p.R312*	0.995	115	0%	74	41.9%	34	14.7%	-	-	-	NULL
UTP11L	51118	genome.wustl.edu	37	1	38484211	38484211	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016037.3	+1	validated	p.V102I	0.046	270	0%	116	36.2%	25	40%	benign(0)	tolerated(0.73)	neutral(0.002)	HMMPfam_Utp11
RRAGC	64121	genome.wustl.edu	37	1	39322687	39322687	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022157.2	-1	provisional	p.D102G	1.000	184	0%	91	41.8%	9	33.3%	possibly_damaging(0.832)	deleterious(0.01)	deleterious(0.723)	superfamily_SSF52540
AKIRIN1	79647	genome.wustl.edu	37	1	39469074	39469074	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000372976	+1	known	p.G2E	1.000	204	0%	91	31.9%	59	38.9%	unknown(0)	-	-	NULL
MACF1	23499	genome.wustl.edu	37	1	39765930	39765930	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012090.3	+1	reviewed	p.V849I	1.000	266	0%	149	42.3%	12	33.3%	probably_damaging(0.964)	deleterious(0.04)	deleterious(0.755)	superfamily_Spectrin repeat
MACF1	23499	genome.wustl.edu	37	1	39776034	39776034	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012090.3	+1	reviewed	p.R1017C	0.980	94	0%	65	44.6%	8	50%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	superfamily_Spectrin repeat
MACF1	23499	genome.wustl.edu	37	1	39845096	39845096	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033044.2	+1	reviewed	p.A2940P	1.000	27	0%	24	37.5%	4	75%	probably_damaging(0.978)	tolerated(0.26)	neutral(0.455)	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
MACF1	23499	genome.wustl.edu	37	1	39907982	39907982	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033044.2	+1	reviewed	p.A4756V	1.000	58	0%	24	54.2%	26	53.8%	benign(0.001)	tolerated(1)	-	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
BMP8B	656	genome.wustl.edu	37	1	40228845	40228845	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001720.3	-1	reviewed	p.S326	0.099	42	0%	25	44%	3	33.3%	-	-	-	HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1,superfamily_SSF57501
BMP8B	656	genome.wustl.edu	37	1	40230344	40230344	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001720.3	-1	reviewed	p.P273	0.049	51	0%	52	28.8%	5	0%	-	-	-	NULL
TRIT1	54802	genome.wustl.edu	37	1	40318514	40318514	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017646.4	-1	validated	p.R150Q	1.000	280	0%	150	42.7%	3	0%	probably_damaging(0.995)	tolerated(0.06)	deleterious(0.780)	HMMPfam_IPPT,superfamily_P-loop containing nucleoside triphosphate hydrolases
CAP1	10487	genome.wustl.edu	37	1	40535528	40535528	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105530.1	+1	reviewed	p.E325D	1.000	99	0%	68	44.1%	124	40.3%	benign(0.004)	tolerated(0.65)	neutral(0.003)	HMMPfam_CAP_C,superfamily_C-terminal domain of adenylylcyclase associated protein
ZNF643	65243	genome.wustl.edu	37	1	40928928	40928928	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000411995	+1	known	p.V397A	0.962	212	0%	99	49.5%	6	66.6%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF642	339559	genome.wustl.edu	37	1	40961717	40961717	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198494.2	+1	validated	p.R523*	0.055	60	0%	36	47.2%	8	50%	-	-	-	NULL
KCNQ4	9132	genome.wustl.edu	37	1	41288069	41288069	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000509682	+1	known	p.L295I	0.994	7	0.000	8	0.625	1	0%	-	-	-	NULL
CTPS	1503	genome.wustl.edu	37	1	41457481	41457481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001905.2	+1	validated	p.E228D	1.000	166	0%	63	42.9%	22	54.5%	benign(0.001)	tolerated(0.29)	neutral(0.029)	HMMPfam_CTP_synth_N,superfamily_SSF52540
SLFNL1	200172	genome.wustl.edu	37	1	41483534	41483534	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144990.3	-1	validated	p.R244W	1.000	4	0.000	9	0.667	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42047314	42047314	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024503.3	-1	validated	p.S1052N	0.998	60	0%	43	27.9%	0	-	benign(0)	tolerated(0.58)	neutral(0.005)	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42048634	42048634	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024503.3	-1	validated	p.D612G	0.973	115	0%	55	45.5%	0	-	possibly_damaging(0.646)	tolerated(0.45)	neutral(0.239)	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42049180	42049180	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024503.3	-1	validated	p.A430V	0.906	50	0%	42	47.6%	1	0%	benign(0.061)	tolerated(0.12)	neutral(0.265)	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42049464	42049464	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024503.3	-1	validated	p.L335	0.946	75	0%	71	36.6%	0	-	-	-	-	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42049757	42049757	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024503.3	-1	validated	p.H238Y	1.000	27	0%	19	36.8%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
FOXJ3	22887	genome.wustl.edu	37	1	42657164	42657164	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014947.3	-1	validated	p.P387	0.003	192	0.5%	207	43%	53	43.3%	-	-	-	NULL
PPCS	79717	genome.wustl.edu	37	1	42925334	42925334	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024664.2	+1	validated	p.A225S	1.000	171	0%	111	11.7%	34	23.5%	probably_damaging(1)	tolerated(0.28)	deleterious(0.531)	HMMPfam_DFP,superfamily_DNA/pantothenate-metab_flavo_C
CCDC30	728621	genome.wustl.edu	37	1	43022058	43022058	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080850.2	+1	validated	p.S219	1.000	104	0%	40	47.5%	0	-	-	-	-	NULL
PPIH	10465	genome.wustl.edu	37	1	43125145	43125145	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000436387	+1	known	p.G6	0.027	147	0%	110	41.8%	0	-	-	-	-	superfamily_Cyclophilin-like
YBX1	4904	genome.wustl.edu	37	1	43162425	43162425	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004559.3	+1	validated	p.R156H	1.000	89	0%	66	50%	1438	40.1%	benign(0.015)	deleterious(0.03)	neutral(0.365)	NULL
EBNA1BP2	10969	genome.wustl.edu	37	1	43630471	43630471	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006824.2	-1	validated	p.S238I	0.155	122	0%	54	37%	98	39.7%	possibly_damaging(0.882)	tolerated(0.18)	neutral(0.400)	HMMPfam_Ebp2
WDR65	149465	genome.wustl.edu	37	1	43638459	43638459	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152498.3	+1	validated	p.F12C	1.000	103	0%	75	37.3%	0	-	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	NULL
C1orf210	149466	genome.wustl.edu	37	1	43748672	43748672	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182517.2	-1	validated	p.V42	0.578	21	0%	27	48.1%	15	40%	-	-	-	NULL
TIE1	7075	genome.wustl.edu	37	1	43775103	43775103	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005424.2	+1	provisional	p.F411	0.783	64	0%	73	42.5%	4	0%	-	-	-	HMMPfam_ig,superfamily_SSF48726
TIE1	7075	genome.wustl.edu	37	1	43784979	43784979	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005424.2	+1	provisional	p.G999D	1.000	72	0%	68	10.3%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
MPL	4352	genome.wustl.edu	37	1	43812149	43812149	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005373.2	+1	reviewed	p.E338D	0.028	55	0%	41	31.7%	0	-	benign(0.01)	tolerated(0.56)	neutral(0.007)	superfamily_Fibronectin type III
MED8	112950	genome.wustl.edu	37	1	43851840	43851840	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052877.3	-1	reviewed	p.A184V	1.000	60	0%	29	13.8%	50	16%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Arc32
MED8	112950	genome.wustl.edu	37	1	43852669	43852669	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052877.3	-1	reviewed	p.R91W	1.000	66	1.5%	53	37.7%	42	42.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Arc32
SZT2	23334	genome.wustl.edu	37	1	43893373	43893373	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015284.2	+1	predicted	p.Q358	0.956	14	0%	20	25%	3	33.3%	-	-	-	NULL
SZT2	23334	genome.wustl.edu	37	1	43905561	43905561	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015284.2	+1	predicted	p.G1452V	0.972	59	0%	55	18.2%	6	50%	probably_damaging(0.989)	deleterious(0.03)	deleterious(0.804)	NULL
SZT2	23334	genome.wustl.edu	37	1	43907744	43907744	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015284.2	+1	predicted	p.R1707W	0.947	20	0%	29	48.3%	10	10%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
SZT2	23334	genome.wustl.edu	37	1	43908140	43908140	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015284.2	+1	predicted	p.P1769T	1.000	22	0%	25	24%	7	57.1%	possibly_damaging(0.951)	tolerated(0.22)	neutral(0.436)	NULL
SZT2	23334	genome.wustl.edu	37	1	43908273	43908273	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015284.2	+1	predicted	p.P1813L	1.000	21	0%	26	46.2%	8	50%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
SZT2	23334	genome.wustl.edu	37	1	43908278	43908278	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015284.2	+1	predicted	p.R1815*	1.000	20	0%	25	48%	7	42.8%	-	-	-	NULL
PTPRF	5792	genome.wustl.edu	37	1	44083189	44083189	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000429895	+1	known	p.R1028*	1.000	36	0%	49	42.9%	218	44.4%	probably_damaging(1)	tolerated(0.2)	deleterious(0.549)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
KDM4A	9682	genome.wustl.edu	37	1	44118929	44118929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014663.2	+1	reviewed	p.S28N	1.000	103	0%	48	39.6%	20	50%	benign(0.009)	tolerated(0.91)	neutral(0.001)	HMMPfam_JmjN,HMMSmart_SM00545
IPO13	9670	genome.wustl.edu	37	1	44422103	44422103	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014652.3	+1	reviewed	p.I311	0.750	37	0%	38	52.6%	40	50%	-	-	-	superfamily_ARM-type_fold
SLC6A9	6536	genome.wustl.edu	37	1	44468264	44468264	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201649.2	-1	validated	p.R333C	1.000	31	0%	35	17.1%	14	21.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF
ERI3	79033	genome.wustl.edu	37	1	44774054	44774054	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024066.1	-1	validated	p.A229V	1.000	129	0%	104	47.1%	107	44.8%	benign(0.262)	tolerated(0.39)	neutral(0.043)	HMMSmart_SM00479,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T
RNF220	55182	genome.wustl.edu	37	1	44877875	44877875	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018150.2	+1	validated	p.R36C	1.000	43	0%	43	30.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RNF220	55182	genome.wustl.edu	37	1	45079862	45079862	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018150.2	+1	validated	p.F217	1.000	30	0%	24	37.5%	0	-	-	-	-	NULL
C1orf228	339541	genome.wustl.edu	37	1	45191048	45191048	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145636.1	+1	validated	p.F432	0.001	23	0%	29	41.4%	2	0%	-	-	-	NULL
C1orf228	339541	genome.wustl.edu	37	1	45191054	45191054	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145636.1	+1	validated	p.E434D	0.000	24	0%	29	44.8%	1	100%	benign(0.133)	tolerated(0.23)	neutral(0.053)	NULL
KIF2C	11004	genome.wustl.edu	37	1	45226368	45226368	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000423289	+1	known	p.L37R	0.920	96	0%	64	35.9%	34	50%	-	-	-	HMMPfam_Kinesin,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF2C	11004	genome.wustl.edu	37	1	45227595	45227595	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000423289	+1	known	p.R42*	1.000	152	0%	116	41.4%	37	48.6%	benign(0)	tolerated(1)	-	HMMPfam_Kinesin,superfamily_P-loop containing nucleoside triphosphate hydrolases
RPS8	6202	genome.wustl.edu	37	1	45242367	45242367	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012.1	+1	reviewed	p.H44	1.000	50	0%	62	45.2%	2513	46.9%	-	-	-	HMMPfam_Ribosomal_S8e
BEST4	266675	genome.wustl.edu	37	1	45250804	45250804	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153274.2	-1	reviewed	p.F296L	1.000	26	0%	29	51.7%	0	-	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	HMMPfam_Bestrophin
PTCH2	8643	genome.wustl.edu	37	1	45288333	45288333	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003738.4	-1	reviewed	p.Q1122H	0.893	28	0%	16	31.2%	2	100%	probably_damaging(0.983)	deleterious(0.05)	deleterious(0.774)	NULL
PTCH2	8643	genome.wustl.edu	37	1	45293620	45293620	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003738.4	-1	reviewed	p.E651D	0.000	21	0%	24	45.8%	5	60%	benign(0)	tolerated(0.62)	neutral(0.004)	HMMPfam_Patched
HECTD3	79654	genome.wustl.edu	37	1	45475780	45475780	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024602.5	-1	validated	p.T213A	1.000	75	0%	69	30.4%	32	34.3%	benign(0.156)	deleterious(0.03)	neutral(0.379)	superfamily_Galactose-binding domain-like
ZSWIM5	57643	genome.wustl.edu	37	1	45504675	45504675	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020883.1	-1	validated	p.I609	1.000	40	0%	35	45.7%	4	50%	-	-	-	NULL
TMEM69	51249	genome.wustl.edu	37	1	46158902	46158902	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016486.3	+1	validated	p.G23	0.079	95	0%	64	43.8%	37	56.7%	-	-	-	NULL
TMEM69	51249	genome.wustl.edu	37	1	46159019	46159019	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016486.3	+1	validated	p.Q62H	0.000	109	0%	88	44.3%	30	46.6%	benign(0.003)	tolerated(0.23)	neutral(0.042)	NULL
TMEM69	51249	genome.wustl.edu	37	1	46159392	46159392	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016486.3	+1	validated	p.V187F	0.969	223	0.4%	119	37.8%	45	53.3%	probably_damaging(0.991)	tolerated(0.23)	deleterious(0.485)	NULL
MAST2	23139	genome.wustl.edu	37	1	46425063	46425063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015112.2	+1	validated	p.R169Q	1.000	82	0%	38	13.2%	29	10.3%	probably_damaging(0.981)	deleterious(0.03)	deleterious(0.790)	NULL
MAST2	23139	genome.wustl.edu	37	1	46496691	46496691	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015112.2	+1	validated	p.R907	1.000	13	0%	11	45.5%	24	37.5%	-	-	-	NULL
POMGNT1	55624	genome.wustl.edu	37	1	46659256	46659256	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017739.3	-1	reviewed	p.F336V	1.000	53	0%	45	15.6%	45	6.6%	probably_damaging(0.978)	deleterious(0.02)	deleterious(0.803)	superfamily_Nucleotide-diphospho-sugar transferases
NSUN4	387338	genome.wustl.edu	37	1	46810801	46810801	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199044.2	+1	validated	p.R141H	1.000	26	0%	16	43.8%	18	61.1%	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	NULL
MOB3C	148932	genome.wustl.edu	37	1	47078822	47078822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145279.4	-1	reviewed	p.D110N	1.000	13	0%	12	33.3%	11	45.4%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Mob1_phocein,superfamily_Mob1/phocein
ATPAF1-AS1	374973	genome.wustl.edu	37	1	47138842	47138842	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145474.1	+1	predicted	p.S112N	0.000	34	0%	28	57.1%	1	100%	-	-	-	NULL
CYP4X1	260293	genome.wustl.edu	37	1	47514242	47514242	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178033.1	+1	reviewed	p.T405A	0.000	200	0.5%	97	10.3%	28	10.7%	benign(0.383)	tolerated(0.35)	neutral(0.143)	HMMPfam_p450,superfamily_Cytochrome P450
CYP4X1	260293	genome.wustl.edu	37	1	47515113	47515113	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178033.1	+1	reviewed	p.F431S	0.998	415	0%	172	37.8%	40	37.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_p450,superfamily_Cytochrome P450
CYP4A22	284541	genome.wustl.edu	37	1	47607809	47607809	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010969.2	+1	reviewed	p.T138A	0.867	54	0%	25	24%	0	-	unknown(0)	deleterious(0.02)	-	HMMPfam_p450,superfamily_Cytochrome P450
STIL	6491	genome.wustl.edu	37	1	47748042	47748042	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001048166.1	-1	reviewed	p.P408H	1.000	199	0%	98	42.9%	10	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
STIL	6491	genome.wustl.edu	37	1	47767944	47767944	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001048166.1	-1	reviewed	p.S76L	0.001	372	0%	145	44.1%	2	0%	benign(0)	tolerated(0.91)	-	NULL
SLC5A9	200010	genome.wustl.edu	37	1	48688526	48688526	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135181.1	+1	validated	p.V40M	1.000	40	0%	33	45.5%	0	-	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	NULL
AGBL4	84871	genome.wustl.edu	37	1	49100160	49100160	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371838	-1	known	p.S319N	1.000	90	0%	42	38.1%	0	-	benign(0.116)	deleterious(0.04)	neutral(0.358)	NULL
AGBL4	84871	genome.wustl.edu	37	1	49511437	49511437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032785.3	-1	validated	p.R138H	1.000	114	0%	33	45.5%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
ELAVL4	1996	genome.wustl.edu	37	1	50666494	50666494	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021952.3	+1	validated	p.P263S	1.000	73	0%	39	15.4%	0	-	benign(0)	tolerated(0.06)	neutral(0.323)	superfamily_RNA-binding domain RBD
ELAVL4	1996	genome.wustl.edu	37	1	50666546	50666546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144775.1	+1	validated	p.G283E	1.000	71	0%	50	44%	0	-	benign(0.008)	tolerated(0.27)	neutral(0.034)	superfamily_SSF54928
CDKN2C	1031	genome.wustl.edu	37	1	51439617	51439617	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001262.2	+1	reviewed	p.A61V	1.000	47	0%	42	50%	34	38.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
CDKN2C	1031	genome.wustl.edu	37	1	51439873	51439873	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001262.2	+1	reviewed	p.L146	1.000	21	0%	24	66.7%	29	65.5%	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
EPS15	2060	genome.wustl.edu	37	1	51913791	51913791	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001981.2	-1	reviewed	p.Y193C	1.000	111	0%	39	33.3%	27	48.1%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMSmart_SM00027,superfamily_EF-hand
NRD1	4898	genome.wustl.edu	37	1	52260189	52260189	+	Silent	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000440943	-1	known	p.S325T	0.982	45	0%	29	34.5%	111	51.3%	-	-	-	HMMPfam_Peptidase_M16_C,superfamily_LuxS/MPP-like metallohydrolase
NRD1	4898	genome.wustl.edu	37	1	52344274	52344274	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002525.2	-1	validated	p.V5A	0.997	15	0%	15	46.7%	22	54.5%	benign(0.035)	deleterious(0)	neutral(0.447)	NULL
ZFYVE9	9372	genome.wustl.edu	37	1	52704338	52704338	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004799.2	+1	reviewed	p.E417K	0.998	67	0%	27	48.1%	2	100%	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
ZFYVE9	9372	genome.wustl.edu	37	1	52744230	52744230	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004799.2	+1	reviewed	p.D938G	1.000	349	0%	180	45%	10	50%	possibly_damaging(0.723)	deleterious(0.03)	deleterious(0.627)	NULL
CC2D1B	200014	genome.wustl.edu	37	1	52820318	52820318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032449.1	-1	validated	p.R804W	1.000	128	0%	102	41.2%	18	55.5%	probably_damaging(0.968)	deleterious(0.01)	deleterious(0.816)	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
CC2D1B	200014	genome.wustl.edu	37	1	52823307	52823307	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032449.1	-1	validated	p.A554V	1.000	12	0%	17	47.1%	31	29%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00685
CC2D1B	200014	genome.wustl.edu	37	1	52823522	52823522	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032449.1	-1	validated	p.T510A	0.014	22	0%	30	40%	11	27.2%	benign(0)	tolerated(0.84)	neutral(0.001)	NULL
ORC1	4998	genome.wustl.edu	37	1	52850920	52850920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004153.2	-1	reviewed	p.A499V	0.998	83	0%	31	35.5%	7	71.4%	benign(0.032)	tolerated(0.15)	neutral(0.242)	superfamily_SSF52540
ORC1	4998	genome.wustl.edu	37	1	52851566	52851566	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004153.2	-1	reviewed	p.A480D	0.998	23	0%	20	45%	5	100%	benign(0.344)	tolerated(0.2)	neutral(0.158)	NULL
ORC1	4998	genome.wustl.edu	37	1	52859236	52859236	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004153.2	-1	reviewed	p.R321*	0.902	310	0.3%	208	45.2%	6	0%	-	-	-	NULL
ORC1	4998	genome.wustl.edu	37	1	52859254	52859254	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004153.2	-1	reviewed	p.R315C	0.000	282	0%	201	46.3%	5	100%	benign(0.008)	deleterious(0.04)	neutral(0.349)	NULL
ZCCHC11	23318	genome.wustl.edu	37	1	52941110	52941110	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009881.1	-1	validated	p.F707	1.000	134	0%	72	41.7%	15	40%	-	-	-	superfamily_PAP/OAS1 substrate-binding domain
FAM159A	348378	genome.wustl.edu	37	1	53122565	53122565	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042693.1	+1	validated	p.P142	0.000	26	0%	29	48.3%	0	-	-	-	-	NULL
SELRC1	65260	genome.wustl.edu	37	1	53163920	53163920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023077.2	-1	validated	p.H27Y	1.000	28	0%	21	71.4%	5	40%	benign(0.06)	deleterious(0.04)	neutral(0.353)	NULL
ZYG11B	79699	genome.wustl.edu	37	1	53237431	53237431	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024646.2	+1	validated	p.G312	0.999	37	0%	18	38.9%	5	0%	-	-	-	superfamily_ARM repeat
ZYG11A	440590	genome.wustl.edu	37	1	53347206	53347206	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371528	+1	known	p.I605V	0.144	136	0%	68	51.5%	0	-	benign(0)	tolerated(0.35)	neutral(0.021)	superfamily_ARM repeat
ECHDC2	55268	genome.wustl.edu	37	1	53377404	53377404	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018281.2	-1	validated	p.F60	0.023	16	0%	27	48.1%	33	18.1%	-	-	-	HMMPfam_ECH,superfamily_SSF52096
PODN	127435	genome.wustl.edu	37	1	53544107	53544107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153703.3	+1	validated	p.R357C	0.954	11	0%	16	50%	2	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_LRR_TYP,superfamily_SSF52047,superfamily_SSF52058
PODN	127435	genome.wustl.edu	37	1	53546513	53546513	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153703.3	+1	validated	p.F590	0.964	20	0%	23	52.2%	2	0%	-	-	-	HMMPfam_LRR_1,superfamily_SSF52047
SLC1A7	6512	genome.wustl.edu	37	1	53556420	53556420	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006671.4	-1	validated	p.R364C	1.000	33	0%	33	30.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SDF
SLC1A7	6512	genome.wustl.edu	37	1	53580439	53580439	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006671.4	-1	validated	p.D141A	1.000	30	0%	28	42.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SDF
CPT2	1376	genome.wustl.edu	37	1	53676857	53676857	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000098.2	+1	reviewed	p.P504L	1.000	22	0%	28	46.4%	28	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases
MAGOH	4116	genome.wustl.edu	37	1	53699276	53699276	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002370.2	-1	reviewed	p.D66N	1.000	312	0%	169	37.3%	111	40.5%	benign(0.307)	tolerated(0.05)	neutral(0.441)	HMMPfam_Mago_nashi,superfamily_Mago nashi protein
TMEM48	55706	genome.wustl.edu	37	1	54262667	54262667	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018087.4	-1	validated	p.R458Q	0.970	123	0%	65	44.6%	20	30%	benign(0.005)	tolerated(0.37)	neutral(0.019)	HMMPfam_Ndc1_Nup
TCEANC2	127428	genome.wustl.edu	37	1	54554318	54554318	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153035.1	+1	predicted	p.S98Y	0.623	158	0%	50	52%	1	100%	possibly_damaging(0.91)	deleterious(0.03)	deleterious(0.727)	HMMSmart_SM00509,HMMPfam_TFIIS,superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70
TTC4	7268	genome.wustl.edu	37	1	55197286	55197286	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004623.3	+1	validated	p.G270D	0.968	72	0%	52	55.8%	7	57.1%	benign(0)	tolerated(0.61)	neutral(0.004)	NULL
TTC22	55001	genome.wustl.edu	37	1	55252683	55252683	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114108.1	-1	validated	p.G269C	1.000	11	0%	15	40%	8	50%	possibly_damaging(0.633)	tolerated(0.18)	neutral(0.277)	superfamily_TPR-like
C1orf177	163747	genome.wustl.edu	37	1	55273664	55273664	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001110533.1	+1	validated	p.R154C	0.519	43	0%	40	35%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TMEM61	199964	genome.wustl.edu	37	1	55451923	55451923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182532.1	+1	provisional	p.P57S	0.039	7	0.000	12	0.333	10	40%	probably_damaging(0.998)	-	-	NULL
BSND	7809	genome.wustl.edu	37	1	55464948	55464948	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_057176.2	+1	reviewed	p.R30Q	1.000	25	0%	26	42.3%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
BSND	7809	genome.wustl.edu	37	1	55470703	55470703	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_057176.2	+1	reviewed	p.F62	0.515	82	0%	53	54.7%	0	-	-	-	-	NULL
PCSK9	255738	genome.wustl.edu	37	1	55509656	55509656	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174936.2	+1	reviewed	p.H116	0.023	25	0%	25	16%	1	100%	-	-	-	superfamily_Protease propeptides/inhibitors,HMMPfam_Inhibitor_I9
USP24	23358	genome.wustl.edu	37	1	55614225	55614225	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015306.2	-1	validated	p.P467T	1.000	317	0%	104	38.5%	4	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
USP24	23358	genome.wustl.edu	37	1	55619923	55619923	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015306.2	-1	validated	p.L417I	1.000	156	0%	67	40.3%	6	66.6%	probably_damaging(0.982)	tolerated(0.27)	neutral(0.460)	NULL
USP24	23358	genome.wustl.edu	37	1	55623007	55623007	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015306.2	-1	validated	p.S310P	1.000	427	0%	88	10.2%	6	0%	benign(0.001)	tolerated(0.2)	neutral(0.049)	NULL
PRKAA2	5563	genome.wustl.edu	37	1	57158174	57158174	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006252.3	+1	validated	p.F158	1.000	131	0%	51	19.6%	1	0%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
C1orf168	199920	genome.wustl.edu	37	1	57202812	57202812	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004303.4	-1	validated	p.S581P	0.969	344	0%	87	40.2%	0	-	benign(0.047)	tolerated(0.09)	neutral(0.299)	NULL
C1orf168	199920	genome.wustl.edu	37	1	57257978	57257978	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004303.4	-1	validated	p.E170K	0.006	182	0%	68	50%	0	-	benign(0.004)	deleterious(0)	neutral(0.445)	NULL
C8B	732	genome.wustl.edu	37	1	57395172	57395172	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000066.2	-1	reviewed	p.R561C	0.674	184	0%	73	43.8%	0	-	possibly_damaging(0.888)	deleterious(0.03)	deleterious(0.712)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
DAB1	1600	genome.wustl.edu	37	1	57602294	57602294	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021080.3	-1	reviewed	p.R76	0.962	293	0%	99	13.1%	1	0%	-	-	-	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
OMA1	115209	genome.wustl.edu	37	1	58971763	58971763	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145243.3	-1	provisional	p.R445Q	1.000	137	0%	54	14.8%	20	10%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M48
C1orf87	127795	genome.wustl.edu	37	1	60499180	60499180	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152377.1	-1	predicted	p.R333C	0.722	249	0%	127	48%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_EF-hand
INADL	10207	genome.wustl.edu	37	1	62237151	62237151	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176877.2	+1	reviewed	p.T191	0.004	176	0.6%	103	38.8%	5	60%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
INADL	10207	genome.wustl.edu	37	1	62374080	62374080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176877.2	+1	reviewed	p.E1140K	1.000	179	0%	75	38.7%	14	21.4%	probably_damaging(0.981)	tolerated(0.2)	deleterious(0.474)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
L1TD1	54596	genome.wustl.edu	37	1	62676338	62676338	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019079.4	+1	validated	p.E631A	0.000	122	0%	43	37.2%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
L1TD1	54596	genome.wustl.edu	37	1	62676465	62676465	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019079.4	+1	validated	p.F673L	0.000	146	0%	59	44.1%	0	-	benign(0.101)	tolerated(0.95)	neutral(0.007)	HMMPfam_Transposase_22
KANK4	163782	genome.wustl.edu	37	1	62740692	62740692	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181712.4	-1	validated	p.E28D	1.000	124	0%	72	37.5%	32	43.7%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	NULL
USP1	7398	genome.wustl.edu	37	1	62910554	62910554	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017415.1	+1	reviewed	p.E235*	0.961	141	0%	55	40%	14	35.7%	-	-	-	HMMPfam_UCH,superfamily_SSF54001
DOCK7	85440	genome.wustl.edu	37	1	62976255	62976255	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033407.2	-1	validated	p.L1427I	0.996	269	0%	119	42.9%	6	16.6%	benign(0.022)	tolerated(0.21)	neutral(0.045)	NULL
DOCK7	85440	genome.wustl.edu	37	1	63018457	63018457	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033407.2	-1	validated	p.I904M	0.998	116	0%	62	45.2%	15	46.6%	possibly_damaging(0.908)	deleterious(0.01)	deleterious(0.767)	NULL
DOCK7	85440	genome.wustl.edu	37	1	63024812	63024812	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033407.2	-1	validated	p.R760Q	1.000	236	0%	109	49.5%	12	66.6%	possibly_damaging(0.941)	tolerated(0.32)	neutral(0.411)	NULL
ALG6	29929	genome.wustl.edu	37	1	63902566	63902566	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013339.3	+1	reviewed	p.P467S	0.999	481	0%	158	15.2%	17	11.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Alg6_Alg8
ROR1	4919	genome.wustl.edu	37	1	64644105	64644105	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005012.2	+1	validated	p.Q794R	1.000	30	0%	30	30%	5	40%	possibly_damaging(0.679)	tolerated(0.61)	neutral(0.246)	NULL
CACHD1	57685	genome.wustl.edu	37	1	65139146	65139146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020925.2	+1	validated	p.A858V	0.988	145	0%	77	33.8%	12	58.3%	benign(0)	tolerated(0.53)	neutral(0.007)	NULL
JAK1	3716	genome.wustl.edu	37	1	65303760	65303760	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002227.2	-1	reviewed	p.Y999H	0.997	136	0%	86	44.2%	17	5.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like
JAK1	3716	genome.wustl.edu	37	1	65311309	65311309	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002227.2	-1	reviewed	p.E668*	1.000	70	0%	65	55.4%	4	25%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
JAK1	3716	genome.wustl.edu	37	1	65339153	65339153	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002227.2	-1	reviewed	p.R128H	1.000	198	0%	119	37%	6	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_B41
DNAJC6	9829	genome.wustl.edu	37	1	65831791	65831791	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014787.2	+1	validated	p.R95Q	1.000	315	0%	105	41.9%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	superfamily_(Phosphotyrosine protein) phosphatases II
LEPR	3953	genome.wustl.edu	37	1	66075638	66075638	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002303.4	+1	reviewed	p.E587	0.143	323	0%	147	40.8%	0	-	-	-	-	HMMSmart_SM00060,superfamily_Fibronectin type III
LEPR	3953	genome.wustl.edu	37	1	66102622	66102622	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002303.4	+1	reviewed	p.Y1141C	1.000	150	0%	34	47.1%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PDE4B	5142	genome.wustl.edu	37	1	66713282	66713282	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037341.1	+1	reviewed	p.D141N	1.000	85	0%	44	43.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PDE4B	5142	genome.wustl.edu	37	1	66829176	66829176	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037341.1	+1	reviewed	p.D402	0.194	78	0%	30	40%	12	8.3%	-	-	-	superfamily_HD-domain/PDEase-like
SGIP1	84251	genome.wustl.edu	37	1	67155943	67155943	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032291.2	+1	validated	p.S505N	1.000	196	0%	106	46.2%	0	-	possibly_damaging(0.706)	deleterious(0)	deleterious(0.699)	NULL
WDR78	79819	genome.wustl.edu	37	1	67301343	67301343	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024763.4	-1	validated	p.R567W	0.996	149	0%	55	38.2%	0	-	probably_damaging(0.98)	deleterious(0.02)	deleterious(0.807)	superfamily_WD40 repeat-like
C1orf141	400757	genome.wustl.edu	37	1	67591496	67591496	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013674.1	-1	predicted	p.A58T	0.000	570	0%	263	47.1%	0	-	benign(0.001)	tolerated(0.52)	neutral(0.009)	NULL
IL23R	149233	genome.wustl.edu	37	1	67724466	67724466	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000425614	+1	known	p.P277H	0.004	110	0%	26	38.5%	0	-	-	-	-	NULL
IL12RB2	3595	genome.wustl.edu	37	1	67852307	67852307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001559.2	+1	reviewed	p.A634V	0.243	179	0%	116	14.7%	0	-	benign(0.183)	deleterious(0)	neutral(0.462)	NULL
DEPDC1	55635	genome.wustl.edu	37	1	68948316	68948316	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114120.1	-1	validated	p.A392D	0.058	411	0%	114	41.2%	5	80%	possibly_damaging(0.808)	tolerated(0.68)	neutral(0.306)	superfamily_Rho_GAP
LRRC7	57554	genome.wustl.edu	37	1	70502161	70502161	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020794.2	+1	validated	p.H676Q	1.000	190	0%	100	40%	1	0%	benign(0)	deleterious(0)	neutral(0.445)	NULL
LRRC7	57554	genome.wustl.edu	37	1	70504863	70504863	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020794.2	+1	validated	p.P1081L	0.993	83	0%	52	50%	2	50%	benign(0.301)	deleterious(0.04)	neutral(0.442)	NULL
ANKRD13C	81573	genome.wustl.edu	37	1	70790585	70790585	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030816.4	-1	validated	p.Q176	1.000	113	0%	55	58.2%	11	54.5%	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ZRANB2	9406	genome.wustl.edu	37	1	71544139	71544139	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203350.1	-1	validated	e3+1	1.000	280	0%	97	32%	0	-	-	-	-	-
LRRIQ3	127255	genome.wustl.edu	37	1	74648256	74648256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105659.1	-1	provisional	p.R180Q	0.005	135	0%	79	40.5%	0	-	possibly_damaging(0.582)	tolerated(0.22)	neutral(0.242)	NULL
FPGT	8790	genome.wustl.edu	37	1	74671126	74671126	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003838.2	+1	reviewed	p.K465N	0.029	154	0%	92	50%	3	66.6%	possibly_damaging(0.861)	tolerated(0.2)	neutral(0.382)	HMMPfam_Fucokinase
TNNI3K	51086	genome.wustl.edu	37	1	74835139	74835139	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001112808.1	+1	validated	p.L614I	1.000	324	0%	74	44.6%	0	-	probably_damaging(0.999)	tolerated(0.12)	deleterious(0.751)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
TNNI3K	51086	genome.wustl.edu	37	1	74836064	74836064	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001112808.1	+1	validated	p.R688H	1.000	278	0%	51	31.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
TNNI3K	51086	genome.wustl.edu	37	1	74957895	74957895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001112808.1	+1	validated	p.R867C	1.000	342	0%	118	47.5%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
C1orf173	127254	genome.wustl.edu	37	1	75086449	75086449	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002912.4	-1	validated	p.L323	0.076	269	0%	95	42.1%	0	-	-	-	-	NULL
C1orf173	127254	genome.wustl.edu	37	1	75108727	75108727	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002912.4	-1	validated	p.R100Q	0.766	306	0%	75	45.3%	0	-	benign(0.003)	deleterious(0.02)	neutral(0.383)	NULL
C1orf173	127254	genome.wustl.edu	37	1	75112384	75112384	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002912.4	-1	validated	p.A70	0.907	204	0%	53	13.2%	0	-	-	-	-	NULL
TYW3	127253	genome.wustl.edu	37	1	75204397	75204397	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138467.2	+1	validated	p.N93	0.000	321	0%	141	46.1%	25	32%	-	-	-	HMMPfam_TYW3,superfamily_DUF207
LHX8	431707	genome.wustl.edu	37	1	75626554	75626554	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001933.1	+1	validated	p.T349A	1.000	406	0%	109	23.9%	0	-	benign(0.051)	tolerated(0.43)	neutral(0.017)	NULL
SLC44A5	204962	genome.wustl.edu	37	1	75685512	75685512	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152697.4	-1	validated	p.C384Y	1.000	242	0%	69	47.8%	1	100%	benign(0.059)	deleterious(0)	neutral(0.449)	HMMPfam_DUF580
ACADM	34	genome.wustl.edu	37	1	76226871	76226871	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127328.1	+1	reviewed	p.Y341C	1.000	167	0%	89	37.1%	33	36.3%	benign(0.044)	tolerated(0.08)	neutral(0.302)	HMMPfam_Acyl-CoA_dh_1,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like
MSH4	4438	genome.wustl.edu	37	1	76343918	76343918	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002440.2	+1	validated	p.Q485H	1.000	227	0%	77	44.2%	0	-	benign(0.15)	tolerated(0.06)	neutral(0.336)	HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII
MSH4	4438	genome.wustl.edu	37	1	76356485	76356485	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002440.2	+1	validated	p.V777	1.000	695	0%	248	37.9%	0	-	-	-	-	HMMPfam_MutS_V,HMMSmart_MUTSac,superfamily_SSF52540
MSH4	4438	genome.wustl.edu	37	1	76363690	76363690	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002440.2	+1	validated	p.K818N	0.540	307	0%	77	50.6%	0	-	benign(0.005)	tolerated(0.25)	neutral(0.037)	HMMPfam_MutS_V,HMMSmart_MUTSac,superfamily_SSF52540
ST6GALNAC3	256435	genome.wustl.edu	37	1	76779542	76779542	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152996.2	+1	validated	p.V24A	0.811	255	0%	81	33.3%	1	0%	benign(0)	tolerated(0.32)	neutral(0.024)	HMMPfam_Glyco_transf_29
AK5	26289	genome.wustl.edu	37	1	77759542	77759542	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174858.1	+1	reviewed	p.F104L	1.000	136	0%	56	30.4%	2	50%	probably_damaging(0.978)	deleterious(0.01)	deleterious(0.826)	NULL
AK5	26289	genome.wustl.edu	37	1	77984325	77984325	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174858.1	+1	reviewed	p.G408	0.020	78	0%	46	56.5%	3	33.3%	-	-	-	HMMPfam_ADK,superfamily_P-loop containing nucleoside triphosphate hydrolases
AK5	26289	genome.wustl.edu	37	1	77987554	77987554	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174858.1	+1	reviewed	p.L452F	0.998	40	0%	30	33.3%	8	12.5%	possibly_damaging(0.512)	tolerated(0.21)	neutral(0.216)	HMMPfam_ADK,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZZZ3	26009	genome.wustl.edu	37	1	78098306	78098306	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015534.4	-1	provisional	p.T245M	0.599	244	0%	82	43.9%	15	60%	benign(0.108)	deleterious(0.05)	neutral(0.354)	NULL
USP33	23032	genome.wustl.edu	37	1	78163050	78163050	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015017.3	-1	validated	p.D927	0.007	264	0%	91	40.7%	22	50%	-	-	-	NULL
USP33	23032	genome.wustl.edu	37	1	78180399	78180399	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015017.3	-1	validated	p.S736	1.000	467	0%	168	36.9%	32	56.2%	-	-	-	HMMSmart_SM00695
USP33	23032	genome.wustl.edu	37	1	78194045	78194045	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015017.3	-1	validated	p.I388T	0.046	399	0%	124	42.7%	16	50%	benign(0)	tolerated(0.31)	neutral(0.027)	HMMPfam_UCH,superfamily_Cysteine proteinases
FAM73A	374986	genome.wustl.edu	37	1	78280802	78280802	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198549.2	+1	predicted	p.S261R	1.000	202	0%	104	47.1%	4	25%	probably_damaging(0.998)	tolerated(0.13)	deleterious(0.727)	HMMPfam_DUF2217
FAM73A	374986	genome.wustl.edu	37	1	78280910	78280910	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198549.2	+1	predicted	p.D297N	1.000	306	0%	156	41.7%	4	25%	benign(0.185)	tolerated(0.13)	neutral(0.270)	HMMPfam_DUF2217
FAM73A	374986	genome.wustl.edu	37	1	78338773	78338773	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198549.2	+1	predicted	p.N550H	1.000	710	0%	428	45.1%	2	0%	possibly_damaging(0.822)	tolerated(0.09)	deleterious(0.607)	HMMPfam_DUF2217
NEXN	91624	genome.wustl.edu	37	1	78407733	78407733	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000342754	+1	known	p.Q400*	1.000	103	0%	44	52.3%	3	33.3%	benign(0.01)	tolerated(0.3)	neutral(0.029)	NULL
GIPC2	54810	genome.wustl.edu	37	1	78585102	78585102	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017655.4	+1	validated	p.G211	0.300	158	0%	73	45.2%	0	-	-	-	-	superfamily_PDZ
IFI44L	10964	genome.wustl.edu	37	1	79102845	79102845	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006820.2	+1	validated	p.M335I	0.976	370	0%	114	14.9%	1	0%	probably_damaging(0.955)	tolerated(0.38)	neutral(0.416)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ELTD1	64123	genome.wustl.edu	37	1	79383686	79383686	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022159.3	-1	validated	p.A504D	1.000	135	0%	38	55.3%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_2
DNASE2B	58511	genome.wustl.edu	37	1	84880444	84880444	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021233.2	+1	reviewed	p.R327W	1.000	90	0%	45	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DNase_II
RPF1	80135	genome.wustl.edu	37	1	84956011	84956011	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025065.6	+1	validated	p.R158*	0.946	183	0%	80	38.8%	34	20.5%	-	-	-	HMMPfam_Brix
RPF1	80135	genome.wustl.edu	37	1	84956094	84956094	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025065.6	+1	validated	p.P185	0.577	185	0%	73	52.1%	18	72.2%	-	-	-	HMMPfam_Brix
SPATA1	100505741	genome.wustl.edu	37	1	84991731	84991731	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081472.1	+1	validated	p.E195	0.089	87	0%	37	29.7%	0	-	-	-	-	NULL
SSX2IP	117178	genome.wustl.edu	37	1	85127944	85127944	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014021.3	-1	reviewed	p.M288I	1.000	773	0%	223	43.5%	13	30.7%	benign(0.058)	tolerated(0.1)	neutral(0.290)	NULL
SSX2IP	117178	genome.wustl.edu	37	1	85135515	85135515	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014021.3	-1	reviewed	p.R92I	1.000	528	0%	115	40%	12	50%	probably_damaging(0.992)	deleterious(0.04)	deleterious(0.796)	NULL
MCOLN3	55283	genome.wustl.edu	37	1	85506705	85506705	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018298.9	-1	validated	p.F128	0.992	289	0%	147	39.5%	0	-	-	-	-	NULL
WDR63	126820	genome.wustl.edu	37	1	85547008	85547008	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145172.3	+1	validated	p.P65	0.708	289	0%	78	35.9%	0	-	-	-	-	NULL
WDR63	126820	genome.wustl.edu	37	1	85570251	85570251	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145172.3	+1	validated	p.C508	0.974	330	0%	205	43.9%	0	-	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDR63	126820	genome.wustl.edu	37	1	85595745	85595745	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145172.3	+1	validated	p.R828C	0.983	146	0%	45	48.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C1orf52	148423	genome.wustl.edu	37	1	85718386	85718386	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198077.3	-1	validated	e3-1	1.000	420	0%	210	43.3%	2	50%	-	-	-	-
DDAH1	23576	genome.wustl.edu	37	1	85787231	85787231	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012137.3	-1	reviewed	p.D254	1.000	114	0%	69	40.6%	36	36.1%	-	-	-	HMMPfam_Amidinotransf,superfamily_Pentein
ZNHIT6	54680	genome.wustl.edu	37	1	86173389	86173389	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017953.3	-1	validated	p.I193	0.003	424	0%	275	41.5%	2	0%	-	-	-	NULL
COL24A1	255631	genome.wustl.edu	37	1	86590893	86590893	+	Missense_Mutation	SNP	T	T	C	rs181596776	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152890.5	-1	validated	p.N376D	0.004	312	0.6%	81	48.1%	0	-	probably_damaging(0.955)	deleterious(0)	deleterious(0.843)	NULL
ODF2L	57489	genome.wustl.edu	37	1	86836790	86836790	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020729.2	-1	validated	p.G323*	0.993	445	0%	139	37.4%	2	0%	-	-	-	NULL
CLCA2	9635	genome.wustl.edu	37	1	86919124	86919124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006536.5	+1	reviewed	p.R743Q	0.987	97	0%	31	29%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CLCA1	1179	genome.wustl.edu	37	1	86961211	86961211	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001285.3	+1	reviewed	p.G656S	1.000	181	0%	62	35.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF1973
SH3GLB1	51100	genome.wustl.edu	37	1	87188297	87188297	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016009.3	+1	validated	p.A140S	1.000	231	0.4%	71	12.7%	13	7.6%	benign(0.047)	tolerated(0.69)	neutral(0.005)	HMMPfam_BAR,HMMSmart_SM00721
PKN2	5586	genome.wustl.edu	37	1	89206678	89206678	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006256.2	+1	validated	p.S19F	1.000	123	0%	51	35.3%	2	0%	benign(0.054)	deleterious(0.04)	neutral(0.352)	NULL
CCBL2	56267	genome.wustl.edu	37	1	89414893	89414893	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000260508	-1	known	p.S341F	1.000	251	0%	88	35.2%	18	22.2%	possibly_damaging(0.924)	deleterious(0.02)	deleterious(0.756)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
CCBL2	56267	genome.wustl.edu	37	1	89427770	89427770	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000260508	-1	known	p.A171V	0.947	146	0%	53	52.8%	7	28.5%	benign(0.005)	deleterious(0)	neutral(0.445)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
RBMXL1	494115	genome.wustl.edu	37	1	89448637	89448637	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000321792	-1	known	p.S291	1.000	141	0%	106	12.3%	21	9.5%	-	-	-	NULL
RBMXL1	494115	genome.wustl.edu	37	1	89448995	89448995	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000321792	-1	known	p.R172H	0.998	206	0%	121	29.8%	10	40%	probably_damaging(0.991)	tolerated(0.08)	deleterious(0.744)	NULL
RBMXL1	494115	genome.wustl.edu	37	1	89449041	89449041	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000321792	-1	known	p.S157R	1.000	181	0.6%	96	45.8%	17	35.2%	benign(0.014)	tolerated(0.48)	neutral(0.011)	NULL
GBP3	2635	genome.wustl.edu	37	1	89477689	89477689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018284.2	-1	reviewed	p.T297I	0.991	35	0%	18	100%	7	71.4%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_GBP_C,superfamily_GBP
GBP3	2635	genome.wustl.edu	37	1	89486297	89486297	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018284.2	-1	reviewed	p.Q36	0.996	191	0%	126	42.1%	2	0%	-	-	-	superfamily_SSF52540
GBP1	2633	genome.wustl.edu	37	1	89522765	89522765	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002053.2	-1	validated	p.L309	0.967	68	0%	43	58.1%	19	15.7%	-	-	-	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain
GBP7	388646	genome.wustl.edu	37	1	89613351	89613351	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207398.2	-1	validated	p.S422P	0.768	396	0%	129	42.6%	0	-	possibly_damaging(0.807)	deleterious(0.04)	deleterious(0.653)	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain
GBP7	388646	genome.wustl.edu	37	1	89616058	89616058	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207398.2	-1	validated	p.A276T	0.001	312	0.3%	123	43.1%	0	-	benign(0.055)	tolerated(0.22)	neutral(0.046)	HMMPfam_GBP,superfamily_P-loop containing nucleoside triphosphate hydrolases
GBP7	388646	genome.wustl.edu	37	1	89637511	89637511	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207398.2	-1	validated	p.Q36H	0.028	145	0%	90	51.1%	0	-	benign(0.298)	deleterious(0)	deleterious(0.536)	HMMPfam_GBP,superfamily_P-loop containing nucleoside triphosphate hydrolases
GBP4	115361	genome.wustl.edu	37	1	89652718	89652718	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052941.4	-1	validated	p.D493G	0.980	121	0%	70	14.3%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GBP_C,superfamily_GBP
GBP4	115361	genome.wustl.edu	37	1	89655869	89655869	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052941.4	-1	validated	p.S350I	0.009	76	0%	64	18.8%	5	0%	possibly_damaging(0.671)	deleterious(0.01)	deleterious(0.643)	HMMPfam_GBP_C,superfamily_GBP
GBP5	115362	genome.wustl.edu	37	1	89727932	89727932	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134486.1	-1	validated	p.Q540*	0.044	225	0%	155	47.7%	11	0%	-	-	-	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain
GBP5	115362	genome.wustl.edu	37	1	89728048	89728048	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134486.1	-1	validated	p.A501V	0.003	239	0%	155	45.2%	12	0%	benign(0.046)	tolerated(0.23)	neutral(0.044)	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain
LRRC8B	23507	genome.wustl.edu	37	1	90049898	90049898	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134476.1	+1	validated	p.L563	1.000	87	0%	32	50%	6	50%	-	-	-	superfamily_SSF52058
LRRC8C	84230	genome.wustl.edu	37	1	90179160	90179160	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032270.4	+1	validated	p.R344H	1.000	70	2.9%	34	38.2%	4	0%	benign(0.43)	deleterious(0.04)	deleterious(0.489)	NULL
LRRC8D	55144	genome.wustl.edu	37	1	90399486	90399486	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134479.1	+1	validated	p.L287M	1.000	66	0%	39	23.1%	22	27.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LRRC8D	55144	genome.wustl.edu	37	1	90400620	90400620	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134479.1	+1	validated	p.L665V	1.000	140	0%	72	58.3%	18	44.4%	possibly_damaging(0.854)	deleterious(0)	deleterious(0.774)	HMMPfam_LRR_1,superfamily_SSF52058
LRRC8D	55144	genome.wustl.edu	37	1	90401182	90401182	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134479.1	+1	validated	p.I852S	0.093	22	0%	14	57.1%	27	44.4%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
ZNF326	284695	genome.wustl.edu	37	1	90473243	90473243	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182976.2	+1	validated	p.S183	1.000	89	0%	43	11.6%	21	14.2%	-	-	-	NULL
ZNF326	284695	genome.wustl.edu	37	1	90482925	90482925	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182976.2	+1	validated	p.D326Y	1.000	333	0%	117	41.9%	19	47.3%	probably_damaging(0.961)	deleterious(0.01)	deleterious(0.810)	HMMPfam_AKAP95
BARHL2	343472	genome.wustl.edu	37	1	91182684	91182684	+	Silent	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020063.1	-1	validated	p.G23	1.000	44	0%	37	27%	0	-	-	-	-	NULL
ZNF644	84146	genome.wustl.edu	37	1	91406449	91406449	+	Silent	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201269.1	-1	validated	p.T154	1.000	79	0%	55	54.5%	8	50%	-	-	-	NULL
HFM1	164045	genome.wustl.edu	37	1	91817109	91817109	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017975.3	-1	validated	p.S690N	1.000	378	0%	119	39.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
HFM1	164045	genome.wustl.edu	37	1	91859806	91859806	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017975.3	-1	validated	p.D113G	0.176	347	0%	111	31.5%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
TGFBR3	7049	genome.wustl.edu	37	1	92181810	92181810	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003243.3	-1	validated	p.G617R	0.998	173	0%	100	41%	1	0%	benign(0.045)	tolerated(0.69)	neutral(0.005)	HMMPfam_Zona_pellucida,HMMSmart_ZP
BRDT	676	genome.wustl.edu	37	1	92446296	92446296	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001726.3	+1	validated	p.E462*	0.011	198	0%	73	41.1%	0	-	-	-	-	NULL
BRDT	676	genome.wustl.edu	37	1	92479792	92479792	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001726.3	+1	validated	p.Q935H	1.000	221	0%	78	37.2%	0	-	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
EPHX4	253152	genome.wustl.edu	37	1	92518156	92518156	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173567.4	+1	validated	p.Y266	1.000	253	0%	88	47.7%	2	0%	-	-	-	HMMPfam_Abhydrolase_1,superfamily_SSF53474
LOC646817	646817	genome.wustl.edu	37	1	92540629	92540629	+	Missense_Mutation	SNP	C	C	T	rs187962727	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_929774.4	-1	model	p.E124K	1.000	58	0%	19	36.8%	0	-	-	-	-	HMMPfam_NAP
RPAP2	79871	genome.wustl.edu	37	1	92798972	92798972	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000370343	+1	known	p.D494N	1.000	362	0%	133	48.1%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GFI1	2672	genome.wustl.edu	37	1	92944259	92944259	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127215.1	-1	reviewed	p.T326A	1.000	152	0%	112	46.4%	4	25%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
EVI5	7813	genome.wustl.edu	37	1	92979254	92979254	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005665.4	-1	validated	p.R798W	0.068	102	0%	39	33.3%	3	33.3%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
EVI5	7813	genome.wustl.edu	37	1	93159945	93159945	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005665.4	-1	validated	p.G348S	1.000	209	0%	62	48.4%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
FAM69A	388650	genome.wustl.edu	37	1	93309649	93309649	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006605.3	-1	reviewed	p.S193L	1.000	64	0%	38	55.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MTF2	22823	genome.wustl.edu	37	1	93575797	93575797	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007358.3	+1	validated	p.G6W	1.000	135	0%	61	32.8%	6	50%	possibly_damaging(0.686)	deleterious(0.01)	deleterious(0.651)	NULL
MTF2	22823	genome.wustl.edu	37	1	93594890	93594890	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007358.3	+1	validated	p.R349C	1.000	339	0.3%	129	47.3%	9	44.4%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
BCAR3	8412	genome.wustl.edu	37	1	94027838	94027838	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003567.2	-1	reviewed	p.R813H	1.000	213	0%	113	38.1%	7	42.8%	probably_damaging(1)	tolerated(0.68)	deleterious(0.502)	HMMSmart_SM00147
DNTTIP2	30836	genome.wustl.edu	37	1	94342395	94342395	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014597.3	-1	provisional	p.T366A	0.000	544	0.2%	334	47.3%	24	45.8%	possibly_damaging(0.775)	deleterious(0.02)	deleterious(0.671)	NULL
DNTTIP2	30836	genome.wustl.edu	37	1	94342500	94342500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014597.3	-1	provisional	p.L331I	0.000	333	0%	188	18.1%	31	32.2%	benign(0.002)	tolerated(0.47)	neutral(0.011)	NULL
ABCA4	24	genome.wustl.edu	37	1	94528133	94528133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000350.2	-1	reviewed	p.S646F	1.000	35	0%	18	55.6%	0	-	benign(0.067)	tolerated(0.06)	neutral(0.327)	NULL
ABCA4	24	genome.wustl.edu	37	1	94546152	94546152	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000350.2	-1	reviewed	p.P327	0.387	152	0%	81	55.6%	0	-	-	-	-	NULL
ARHGAP29	9411	genome.wustl.edu	37	1	94650932	94650932	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004815.3	-1	validated	p.G629D	1.000	393	0%	191	39.8%	17	52.9%	probably_damaging(0.979)	tolerated(0.05)	deleterious(0.767)	HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_Cysteine-rich domain
ABCD3	5825	genome.wustl.edu	37	1	94940703	94940703	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002858.3	+1	reviewed	p.S137F	1.000	239	0%	68	30.9%	30	53.3%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_ABC_membrane_2,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCD3	5825	genome.wustl.edu	37	1	94980727	94980727	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002858.3	+1	reviewed	p.S624Y	1.000	621	0%	170	35.9%	33	60.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
SLC44A3	126969	genome.wustl.edu	37	1	95303290	95303290	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114106.1	+1	validated	p.R178Q	1.000	400	0%	174	39.1%	18	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC44A3	126969	genome.wustl.edu	37	1	95360465	95360465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114106.1	+1	validated	p.A650V	0.555	120	0%	60	35%	15	53.3%	benign(0.014)	tolerated(0.06)	neutral(0.323)	NULL
RWDD3	25950	genome.wustl.edu	37	1	95710193	95710193	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015485.4	+1	validated	p.R171I	1.000	153	0%	64	39.1%	15	53.3%	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	NULL
PTBP2	58155	genome.wustl.edu	37	1	97272491	97272491	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021190.2	+1	reviewed	p.A383V	1.000	357	0%	158	34.2%	13	38.4%	benign(0.004)	deleterious(0.01)	neutral(0.406)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
DPYD	1806	genome.wustl.edu	37	1	98015165	98015165	+	Missense_Mutation	SNP	G	G	A	rs72549304		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000110.3	-1	reviewed	p.S492L	1.000	194	0%	62	40.3%	0	-	possibly_damaging(0.949)	deleterious(0)	deleterious(0.838)	NULL
SNX7	51375	genome.wustl.edu	37	1	99150472	99150472	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015976.3	+1	reviewed	p.S71N	1.000	290	0%	98	43.9%	32	53.1%	benign(0.019)	tolerated(0.24)	neutral(0.038)	NULL
PALMD	54873	genome.wustl.edu	37	1	100155013	100155013	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017734.4	+1	validated	p.I399	0.336	38	0%	18	55.6%	18	33.3%	-	-	-	NULL
AGL	178	genome.wustl.edu	37	1	100316616	100316616	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000028.2	+1	reviewed	p.Q6H	1.000	382	0%	232	38.4%	5	20%	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	NULL
SLC35A3	23443	genome.wustl.edu	37	1	100464841	100464841	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012243.1	+1	provisional	p.R71Q	1.000	307	0%	97	38.1%	16	56.2%	benign(0.04)	tolerated(0.26)	neutral(0.037)	HMMPfam_Nuc_sug_transp
GPR88	54112	genome.wustl.edu	37	1	101004652	101004652	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022049.2	+1	validated	p.G44R	1.000	9	0.000	12	0.667	1	0%	possibly_damaging(0.85)	tolerated(0.1)	deleterious(0.613)	superfamily_SSF81321
EXTL2	2135	genome.wustl.edu	37	1	101339738	101339738	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033025.1	-1	validated	p.I251	0.994	186	0%	35	51.4%	6	50%	-	-	-	HMMPfam_Glyco_transf_64,superfamily_Nucleotide-diphospho-sugar transferases
EXTL2	2135	genome.wustl.edu	37	1	101343236	101343236	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033025.1	-1	validated	p.D77Y	1.000	265	0%	65	13.8%	6	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_transf_64,superfamily_Nucleotide-diphospho-sugar transferases
S1PR1	1901	genome.wustl.edu	37	1	101704859	101704859	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001400.4	+1	reviewed	p.A107T	0.993	65	0%	51	39.2%	1	100%	benign(0.001)	tolerated(0.24)	neutral(0.037)	HMMPfam_7tm_1,superfamily_SSF81321
OLFM3	118427	genome.wustl.edu	37	1	102270432	102270432	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058170.2	-1	validated	p.R247C	1.000	54	0%	18	33.3%	0	-	possibly_damaging(0.836)	tolerated(0.07)	deleterious(0.639)	HMMPfam_OLF,HMMSmart_SM00284
COL11A1	1301	genome.wustl.edu	37	1	103381191	103381191	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080629.2	-1	reviewed	p.V1283A	0.038	232	0%	85	40%	1	0%	unknown(0)	tolerated(0.72)	-	HMMPfam_Collagen
COL11A1	1301	genome.wustl.edu	37	1	103484403	103484403	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080629.2	-1	reviewed	p.E453K	1.000	102	0%	47	42.6%	0	-	unknown(0)	deleterious(0.04)	-	NULL
COL11A1	1301	genome.wustl.edu	37	1	103488529	103488529	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080629.2	-1	reviewed	p.F350	1.000	315	0%	128	45.3%	0	-	-	-	-	NULL
COL11A1	1301	genome.wustl.edu	37	1	103548505	103548505	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080629.2	-1	reviewed	p.A44T	1.000	380	0.3%	146	40.4%	1	0%	unknown(0)	tolerated(0.09)	-	HMMSmart_TSPN
AMY2B	280	genome.wustl.edu	37	1	104120220	104120220	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020978.3	+1	reviewed	p.R404C	1.000	190	0%	77	40.3%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Alpha-amylase,HMMSmart_SM00642,superfamily_(Trans)glycosidases
LOC126987	126987	genome.wustl.edu	37	1	106623363	106623363	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342097.1	-1	model	p.A232	0.039	9	0.000	15	0.400	0	-	-	-	-	NULL
NTNG1	22854	genome.wustl.edu	37	1	107867232	107867232	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113226.1	+1	validated	p.S192F	1.000	177	0%	63	39.7%	1	0%	possibly_damaging(0.942)	tolerated(0.16)	neutral(0.447)	HMMPfam_Laminin_N,HMMSmart_SM00136
NTNG1	22854	genome.wustl.edu	37	1	107937833	107937833	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113226.1	+1	validated	p.C315	1.000	96	0%	44	54.5%	2	0%	-	-	-	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_1,superfamily_EGF/Laminin
VAV3	10451	genome.wustl.edu	37	1	108291630	108291630	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006113.4	-1	reviewed	p.D488Y	1.000	613	0%	163	36.8%	1	100%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
VAV3	10451	genome.wustl.edu	37	1	108303481	108303481	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006113.4	-1	reviewed	p.N314K	1.000	145	0%	72	44.4%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
PRPF38B	55119	genome.wustl.edu	37	1	109242235	109242235	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018061.2	+1	validated	p.H412Y	1.000	226	0%	112	12.5%	36	8.3%	unknown(0)	deleterious(0.01)	-	NULL
PRPF38B	55119	genome.wustl.edu	37	1	109242529	109242529	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018061.2	+1	validated	p.R510*	1.000	94	0%	37	37.8%	63	41.2%	-	-	-	NULL
STXBP3	6814	genome.wustl.edu	37	1	109325119	109325119	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007269.2	+1	validated	p.R295	1.000	225	0%	78	15.4%	19	31.5%	-	-	-	HMMPfam_Sec1,superfamily_Sec1-like
WDR47	22911	genome.wustl.edu	37	1	109554195	109554195	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142550.1	-1	validated	p.S165I	1.000	182	0%	98	43.9%	9	44.4%	possibly_damaging(0.799)	tolerated(0.11)	deleterious(0.573)	NULL
KIAA1324	57535	genome.wustl.edu	37	1	109714584	109714584	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020775.3	+1	validated	p.T188	0.008	52	0%	38	42.1%	186	38.7%	-	-	-	superfamily_Growth factor receptor domain
KIAA1324	57535	genome.wustl.edu	37	1	109727694	109727694	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020775.3	+1	validated	p.R327H	1.000	54	0%	32	28.1%	103	38.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Growth factor receptor domain
SORT1	6272	genome.wustl.edu	37	1	109870177	109870177	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002959.4	-1	reviewed	p.N473S	0.899	93	0%	49	34.7%	18	38.8%	benign(0.002)	tolerated(0.25)	neutral(0.037)	HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase
PSMA5	5686	genome.wustl.edu	37	1	109953692	109953692	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002790.2	-1	reviewed	p.R168*	1.000	95	1.1%	44	45.5%	94	8.5%	-	-	-	HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)
ATXN7L2	127002	genome.wustl.edu	37	1	110033934	110033934	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153340.4	+1	validated	p.R583	1.000	30	0%	29	51.7%	4	25%	-	-	-	NULL
GSTM5	2949	genome.wustl.edu	37	1	110257949	110257949	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000369813	+1	known	p.K177N	0.000	131	0%	104	39.4%	0	-	possibly_damaging(0.662)	deleterious(0)	deleterious(0.678)	NULL
GSTM3	2947	genome.wustl.edu	37	1	110279761	110279761	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000849.4	-1	reviewed	p.S204A	1.000	108	0%	49	38.8%	99	44.4%	benign(0.186)	deleterious(0.02)	neutral(0.401)	superfamily_Glutathione S-transferase (GST) C-terminal domain
EPS8L3	79574	genome.wustl.edu	37	1	110301960	110301960	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139053.1	-1	reviewed	p.A102V	0.027	32	0%	23	56.5%	0	-	benign(0)	tolerated(1)	-	HMMPfam_PTB
CSF1	1435	genome.wustl.edu	37	1	110466479	110466479	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000757.4	+1	validated	p.G412	0.000	19	0%	20	20%	13	46.1%	-	-	-	HMMPfam_CSF-1
AHCYL1	10768	genome.wustl.edu	37	1	110559349	110559349	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006621.4	+1	validated	p.G320	1.000	689	0%	313	44.7%	58	31%	-	-	-	HMMPfam_AdoHcyase,HMMPfam_AdoHcyase_NAD,superfamily_NAD(P)-binding Rossmann-fold domains,PatternScan_ADOHCYASE_2,superfamily_Formate/glycerate dehydrogenase catalytic domain-like
FAM40A	85369	genome.wustl.edu	37	1	110594436	110594436	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033088.2	+1	validated	p.S731	1.000	48	0%	39	43.6%	21	66.6%	-	-	-	NULL
RBM15	64783	genome.wustl.edu	37	1	110884673	110884673	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022768.4	+1	validated	p.T882	0.997	62	0%	52	34.6%	8	50%	-	-	-	HMMPfam_SPOC,superfamily_SPOC domain-like
KCNA10	3744	genome.wustl.edu	37	1	111060094	111060094	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005549.2	-1	reviewed	p.T439I	1.000	123	0%	88	42%	0	-	benign(0.303)	deleterious(0.01)	deleterious(0.500)	HMMPfam_Ion_trans,superfamily_SSF81324
CHIA	27159	genome.wustl.edu	37	1	111860698	111860698	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000430615	+1	known	p.R162Q	0.060	134	0.7%	52	36.5%	0	-	-	-	-	HMMPfam_Glyco_hydro_18,HMMSmart_SM00636,superfamily_(Trans)glycosidases
RAP1A	5906	genome.wustl.edu	37	1	112238020	112238020	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010935.1	+1	reviewed	p.S39P	1.000	274	0%	91	14.3%	43	2.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX20	11218	genome.wustl.edu	37	1	112308892	112308892	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007204.4	+1	reviewed	p.Y616H	1.000	129	0%	67	44.8%	15	53.3%	probably_damaging(0.962)	deleterious(0)	deleterious(0.850)	NULL
SLC16A1	6566	genome.wustl.edu	37	1	113460301	113460301	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003051.3	-1	reviewed	p.R243*	0.203	162	0%	106	30.2%	23	21.7%	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
LRIG2	9860	genome.wustl.edu	37	1	113636151	113636151	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014813.1	+1	provisional	p.K160N	1.000	224	0%	115	41.7%	2	100%	probably_damaging(0.995)	tolerated(0.23)	deleterious(0.499)	HMMPfam_LRR_1,superfamily_SSF52047
PHTF1	10745	genome.wustl.edu	37	1	114255905	114255905	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006608.2	-1	validated	p.R260H	0.001	461	0.4%	232	40.9%	8	37.5%	benign(0.003)	tolerated(0.23)	neutral(0.042)	NULL
RSBN1	54665	genome.wustl.edu	37	1	114309073	114309073	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018364.3	-1	validated	p.C646	1.000	25	0%	20	40%	10	60%	-	-	-	NULL
RSBN1	54665	genome.wustl.edu	37	1	114310956	114310956	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018364.3	-1	validated	p.E572K	1.000	239	0%	134	47.8%	6	50%	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	NULL
RSBN1	54665	genome.wustl.edu	37	1	114354442	114354442	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018364.3	-1	validated	p.R198H	1.000	52	0%	54	53.7%	9	77.7%	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	NULL
PTPN22	26191	genome.wustl.edu	37	1	114362221	114362221	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015967.4	-1	reviewed	p.N779	0.987	324	0%	176	18.8%	0	-	unknown(0)	tolerated(0.2)	-	NULL
PTPN22	26191	genome.wustl.edu	37	1	114372234	114372234	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015967.4	-1	reviewed	p.K744Q	1.000	480	0%	242	43.4%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
HIPK1	204851	genome.wustl.edu	37	1	114483988	114483988	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198268.1	+1	reviewed	p.R328H	1.000	76	0%	37	35.1%	21	38%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
OLFML3	56944	genome.wustl.edu	37	1	114523233	114523233	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020190.2	+1	validated	p.V132M	0.003	85	0%	62	41.9%	2	0%	benign(0.013)	tolerated(0.12)	neutral(0.261)	HMMPfam_OLF
TRIM33	51592	genome.wustl.edu	37	1	114945409	114945409	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000448034	-1	known	p.R716H	0.998	133	0%	81	40.7%	13	53.8%	-	-	-	superfamily_Bromodomain
TRIM33	51592	genome.wustl.edu	37	1	114964082	114964082	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000448034	-1	known	p.R416H	0.185	345	0.3%	186	44.6%	11	36.3%	-	-	-	NULL
BCAS2	10286	genome.wustl.edu	37	1	115112627	115112627	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005872.2	-1	validated	p.R179	1.000	583	0%	229	10.5%	49	10.2%	-	-	-	HMMPfam_BCAS2
DENND2C	163259	genome.wustl.edu	37	1	115130550	115130550	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198459.3	-1	validated	p.S762P	1.000	57	0%	47	36.2%	1	100%	possibly_damaging(0.714)	deleterious(0.04)	deleterious(0.607)	HMMPfam_dDENN,HMMSmart_dDENN
DENND2C	163259	genome.wustl.edu	37	1	115144774	115144774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198459.3	-1	validated	p.R513Q	1.000	189	0%	77	32.5%	4	50%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMPfam_uDENN,HMMSmart_uDENN
DENND2C	163259	genome.wustl.edu	37	1	115147641	115147641	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198459.3	-1	validated	p.G466	1.000	344	0%	140	46.4%	1	0%	-	-	-	HMMPfam_uDENN,HMMSmart_uDENN
DENND2C	163259	genome.wustl.edu	37	1	115168511	115168511	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198459.3	-1	validated	p.A32V	0.993	298	0%	135	42.2%	0	-	benign(0.001)	tolerated(0.07)	neutral(0.319)	NULL
AMPD1	270	genome.wustl.edu	37	1	115220020	115220020	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000036.2	-1	reviewed	p.R447H	1.000	75	0%	62	37.1%	0	-	probably_damaging(0.987)	deleterious(0.02)	deleterious(0.820)	HMMPfam_A_deaminase,superfamily_SSF51556
AMPD1	270	genome.wustl.edu	37	1	115222998	115222998	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000036.2	-1	reviewed	p.V217I	0.972	229	0%	121	11.6%	0	-	benign(0)	tolerated(0.2)	neutral(0.049)	NULL
AMPD1	270	genome.wustl.edu	37	1	115226906	115226906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000036.2	-1	reviewed	p.S154L	1.000	223	0%	118	55.9%	0	-	benign(0.004)	deleterious(0.02)	neutral(0.383)	NULL
CSDE1	7812	genome.wustl.edu	37	1	115276472	115276472	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130523.1	-1	validated	p.E255*	1.000	358	0%	182	39%	84	9.5%	-	-	-	HMMPfam_CSD,HMMSmart_SM00357,superfamily_Nucleic acid-binding proteins
CASQ2	845	genome.wustl.edu	37	1	116268160	116268160	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001232.3	-1	reviewed	p.R251H	1.000	100	0%	47	21.3%	0	-	probably_damaging(0.996)	tolerated(0.11)	deleterious(0.733)	HMMPfam_Calsequestrin,superfamily_Thioredoxin-like
SLC22A15	55356	genome.wustl.edu	37	1	116605463	116605463	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018420.2	+1	validated	p.V418I	0.742	180	0%	79	46.8%	3	33.3%	benign(0.001)	tolerated(0.64)	neutral(0.003)	superfamily_MFS general substrate transporter
ATP1A1	476	genome.wustl.edu	37	1	116935566	116935566	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000701.7	+1	reviewed	p.A475T	0.013	113	0%	70	42.9%	462	43.5%	benign(0)	tolerated(0.13)	neutral(0.253)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M
IGSF3	3321	genome.wustl.edu	37	1	117156428	117156428	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001542.2	-1	validated	p.R264Q	0.788	21	0%	25	52%	5	80%	possibly_damaging(0.87)	tolerated(0.53)	neutral(0.346)	HMMSmart_IG
PTGFRN	5738	genome.wustl.edu	37	1	117491895	117491895	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020440.2	+1	provisional	p.R305Q	0.832	13	0%	18	50%	69	44.9%	probably_damaging(0.997)	tolerated(0.23)	deleterious(0.508)	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
PTGFRN	5738	genome.wustl.edu	37	1	117504095	117504095	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020440.2	+1	provisional	p.R482W	0.999	89	0%	59	52.5%	65	53.8%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
PTGFRN	5738	genome.wustl.edu	37	1	117527596	117527596	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020440.2	+1	provisional	p.V821A	1.000	28	0%	22	40.9%	54	38.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00409
PTGFRN	5738	genome.wustl.edu	37	1	117529454	117529454	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020440.2	+1	provisional	p.I835	0.999	41	0%	32	43.8%	52	42.3%	-	-	-	NULL
TTF2	8458	genome.wustl.edu	37	1	117605062	117605062	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003594.3	+1	reviewed	p.G62D	0.999	322	0%	177	39%	7	28.5%	probably_damaging(1)	tolerated(0.18)	deleterious(0.556)	NULL
TTF2	8458	genome.wustl.edu	37	1	117631517	117631517	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003594.3	+1	reviewed	p.A752D	0.999	98	0%	83	47%	13	76.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
TTF2	8458	genome.wustl.edu	37	1	117633218	117633218	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003594.3	+1	reviewed	p.V854A	0.958	418	0%	251	49%	9	44.4%	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	NULL
GDAP2	54834	genome.wustl.edu	37	1	118441777	118441777	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017686.3	-1	validated	p.S233L	0.308	173	0%	95	38.9%	9	66.6%	benign(0.156)	deleterious(0.01)	neutral(0.420)	NULL
WDR3	10885	genome.wustl.edu	37	1	118481174	118481174	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006784.2	+1	reviewed	p.R191Q	1.000	285	0%	129	39.5%	17	35.2%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDR3	10885	genome.wustl.edu	37	1	118492693	118492693	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006784.2	+1	reviewed	p.K562	0.997	458	0%	190	46.3%	26	38.4%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDR3	10885	genome.wustl.edu	37	1	118495253	118495253	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006784.2	+1	reviewed	p.E707K	1.000	183	0%	70	35.7%	24	37.5%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_WD40 repeat-like
WARS2	10352	genome.wustl.edu	37	1	119584944	119584944	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015836.3	-1	reviewed	p.G153D	0.997	113	0%	69	58%	18	33.3%	possibly_damaging(0.948)	tolerated(0.22)	neutral(0.433)	HMMPfam_tRNA-synt_1b,superfamily_Nucleotidylyl transferase
PHGDH	26227	genome.wustl.edu	37	1	120269483	120269483	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006623.3	+1	reviewed	p.P122	0.998	32	0%	50	12%	231	1.7%	-	-	-	HMMPfam_2-Hacid_dh,HMMPfam_2-Hacid_dh_C,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Formate/glycerate dehydrogenase catalytic domain-like
HMGCS2	3158	genome.wustl.edu	37	1	120298174	120298174	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005518.3	-1	reviewed	p.A355T	1.000	304	0%	171	49.1%	2	0%	benign(0.308)	tolerated(0.5)	neutral(0.106)	HMMPfam_HMG_CoA_synt_C,superfamily_Thiolase-like
NBPF7	343505	genome.wustl.edu	37	1	120379945	120379945	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001047980.1	-1	predicted	p.A292	0.000	247	0.4%	143	44.1%	0	-	-	-	-	HMMPfam_DUF1220
ADAM30	11085	genome.wustl.edu	37	1	120437857	120437857	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021794.2	-1	reviewed	p.T368N	0.000	79	0%	69	47.8%	0	-	benign(0.004)	deleterious(0.02)	neutral(0.383)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
NOTCH2	4853	genome.wustl.edu	37	1	120491059	120491059	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024408.2	-1	reviewed	p.E910D	0.991	39	0%	19	42.1%	12	33.3%	benign(0.179)	tolerated(0.51)	neutral(0.026)	NULL
FAM72B	653820	genome.wustl.edu	37	1	120841983	120841983	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100910.1	+1	predicted	p.D54G	1.000	885	0%	544	13.2%	13	23%	probably_damaging(0.998)	tolerated(0.17)	deleterious(0.533)	NULL
PDE4DIP	9659	genome.wustl.edu	37	1	144854518	144854518	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014644.4	-1	validated	p.L2318	0.403	311	0%	171	12.9%	3	0%	-	-	-	NULL
PDE4DIP	9659	genome.wustl.edu	37	1	144874794	144874794	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014644.4	-1	validated	p.R1605H	0.999	114	0%	88	19.3%	3	0%	unknown(0)	tolerated(0.11)	-	NULL
PDE4DIP	9659	genome.wustl.edu	37	1	144922254	144922254	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014644.4	-1	validated	p.E305A	1.000	510	0%	278	18%	15	0%	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	NULL
NOTCH2NL	388677	genome.wustl.edu	37	1	145281661	145281661	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203458.3	+1	validated	p.C197	1.000	68	0%	54	13%	27	11.1%	-	-	-	HMMSmart_SM00181,superfamily_EGF/Laminin
HFE2	148738	genome.wustl.edu	37	1	145416902	145416902	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213653.3	+1	reviewed	p.S416Y	0.006	52	0%	57	36.8%	0	-	possibly_damaging(0.85)	deleterious(0.03)	deleterious(0.692)	HMMPfam_RGM_C
ANKRD34A	284615	genome.wustl.edu	37	1	145473813	145473813	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039888.2	+1	validated	p.S162Y	0.998	21	0%	15	40%	0	-	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	superfamily_Ankyrin repeat
PEX11B	8799	genome.wustl.edu	37	1	145522728	145522728	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003846.2	+1	validated	p.L197M	0.969	45	0%	35	37.1%	29	44.8%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_PEX11
ANKRD35	148741	genome.wustl.edu	37	1	145558910	145558910	+	Missense_Mutation	SNP	G	G	A	rs186195553	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144698.3	+1	validated	p.A177T	0.984	12	0%	12	33.3%	8	62.5%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
POLR3C	10623	genome.wustl.edu	37	1	145594076	145594076	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006468.6	-1	provisional	p.R496C	0.998	255	0%	131	52.7%	29	48.2%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	NULL
POLR3C	10623	genome.wustl.edu	37	1	145598276	145598276	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006468.6	-1	provisional	p.S326F	1.000	136	0%	67	38.8%	21	66.6%	benign(0)	tolerated(0.18)	neutral(0.056)	HMMPfam_RNA_pol_Rpc82
PDZK1	5174	genome.wustl.edu	37	1	145762204	145762204	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002614.3	+1	provisional	p.D461N	0.198	350	0%	110	31.8%	0	-	benign(0.025)	deleterious(0.04)	neutral(0.350)	superfamily_PDZ
BCL9	607	genome.wustl.edu	37	1	147091688	147091688	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004326.2	+1	reviewed	p.P576L	1.000	47	0%	33	48.5%	13	61.5%	probably_damaging(0.99)	deleterious(0.03)	deleterious(0.806)	NULL
ACP6	51205	genome.wustl.edu	37	1	147127350	147127350	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016361.3	-1	validated	p.I191	1.000	80	0%	39	38.5%	9	44.4%	-	-	-	HMMPfam_Acid_phosphat_A,superfamily_Phosphoglycerate mutase-like
GJA5	2702	genome.wustl.edu	37	1	147230623	147230623	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005266.5	-1	reviewed	p.R242W	0.000	83	0%	69	36.2%	0	-	possibly_damaging(0.598)	deleterious(0.01)	deleterious(0.613)	NULL
GJA8	2703	genome.wustl.edu	37	1	147380904	147380904	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005267.4	+1	reviewed	p.I274	0.992	66	0%	57	22.8%	0	-	-	-	-	HMMPfam_Connexin50
NBPF14	25832	genome.wustl.edu	37	1	148025816	148025816	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015383.1	-1	predicted	p.R6*	0.001	185	0%	73	19.2%	4	0%	-	-	-	NULL
HIST2H3PS2	440686	genome.wustl.edu	37	1	149400221	149400221	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000369176	-1	known	p.T108P	1.000	16	0%	21	52.4%	0	-	possibly_damaging(0.632)	-	-	HMMSmart_H3,HMMPfam_Histone,superfamily_Histone-fold
HIST2H3PS2	440686	genome.wustl.edu	37	1	149400415	149400415	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000369176	-1	known	p.R43Q	1.000	13	7.7%	13	30.8%	0	-	probably_damaging(0.98)	-	-	HMMSmart_H3,superfamily_Histone-fold
FAM72C	554282	genome.wustl.edu	37	1	149459508	149459508	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000369175	-1	known	p.F14	1.000	667	0%	282	40.1%	0	-	possibly_damaging(0.805)	deleterious(0.04)	deleterious(0.652)	NULL
FCGR1A	2209	genome.wustl.edu	37	1	149760155	149760155	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000566.3	+1	reviewed	p.I181L	0.010	329	0%	208	32.2%	2	0%	benign(0.025)	tolerated(0.14)	neutral(0.251)	HMMSmart_SM00409,superfamily_Immunoglobulin
HIST2H2BF	440689	genome.wustl.edu	37	1	149783635	149783635	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000427880	-1	known	p.A82T	1.000	111	0%	127	38.6%	17	29.4%	possibly_damaging(0.903)	deleterious(0.01)	deleterious(0.764)	HMMSmart_H2B,HMMPfam_Histone,superfamily_Histone-fold
SV2A	9900	genome.wustl.edu	37	1	149879612	149879612	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014849.3	-1	validated	p.G509V	1.000	150	0.7%	96	45.8%	1	0%	benign(0.018)	tolerated(0.11)	neutral(0.272)	HMMPfam_MFS_1
SV2A	9900	genome.wustl.edu	37	1	149884793	149884793	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014849.3	-1	validated	p.S200	0.582	23	0%	25	56%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SV2A	9900	genome.wustl.edu	37	1	149885386	149885386	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014849.3	-1	validated	p.E3*	1.000	22	0%	18	55.6%	0	-	-	-	-	NULL
MTMR11	10903	genome.wustl.edu	37	1	149903307	149903307	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181873.3	-1	validated	p.R307C	1.000	46	0%	33	45.5%	4	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_SSF52799
VPS45	11311	genome.wustl.edu	37	1	150044263	150044263	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007259.3	+1	reviewed	p.R87*	0.999	659	0.2%	366	39.3%	10	0%	-	-	-	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
VPS45	11311	genome.wustl.edu	37	1	150048370	150048370	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007259.3	+1	reviewed	p.E117K	1.000	220	0%	126	40.5%	8	0%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
VPS45	11311	genome.wustl.edu	37	1	150049247	150049247	+	Missense_Mutation	SNP	T	T	C	rs191692092	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007259.3	+1	reviewed	p.C172R	1.000	182	0%	89	42.7%	22	4.5%	benign(0.004)	tolerated(0.79)	neutral(0.001)	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
CA14	23632	genome.wustl.edu	37	1	150233921	150233921	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012113.1	+1	reviewed	p.P47L	1.000	62	0%	44	50%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase
ENSG00000238526	0	genome.wustl.edu	37	1	150234148	150234148	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000458929	+1	novel	NULL	0.001	15	0%	18	50%	0	-	-	-	-	-
C1orf51	148523	genome.wustl.edu	37	1	150256902	150256902	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144697.2	+1	predicted	p.K170M	1.000	234	0%	166	52.4%	21	42.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RPRD2	23248	genome.wustl.edu	37	1	150443366	150443366	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015203.3	+1	validated	p.I648F	0.997	109	0%	72	50%	17	52.9%	benign(0.017)	deleterious(0.01)	neutral(0.406)	NULL
RPRD2	23248	genome.wustl.edu	37	1	150445232	150445232	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015203.3	+1	validated	p.P1270S	1.000	45	0%	39	33.3%	41	36.5%	possibly_damaging(0.894)	deleterious(0)	deleterious(0.796)	NULL
TARS2	80222	genome.wustl.edu	37	1	150461542	150461542	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025150.3	+1	provisional	p.F122	0.952	125	0%	81	34.6%	12	50%	-	-	-	superfamily_TGS-like,superfamily_Thr/Ala-tRNA-synth_IIc_edit
ENSA	2029	genome.wustl.edu	37	1	150599972	150599972	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207042.1	-1	reviewed	p.D52N	1.000	100	0%	90	21.1%	81	9.8%	benign(0.033)	tolerated(0.05)	neutral(0.347)	HMMPfam_Endosulfine
SETDB1	9869	genome.wustl.edu	37	1	150915098	150915098	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145415.1	+1	reviewed	p.R203*	0.993	79	0%	49	46.9%	8	25%	-	-	-	NULL
ANXA9	8416	genome.wustl.edu	37	1	150960612	150960612	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003568.2	+1	validated	p.A248V	0.004	125	0%	99	50.5%	0	-	benign(0.061)	tolerated(0.14)	neutral(0.254)	superfamily_Annexin,HMMPfam_Annexin,HMMSmart_ANX
PRUNE	58497	genome.wustl.edu	37	1	150998132	150998132	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021222.1	+1	provisional	p.A221V	1.000	260	0%	129	43.4%	10	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_DHHA2,superfamily_DHH phosphoesterases
SCNM1	79005	genome.wustl.edu	37	1	151139599	151139599	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024041.2	+1	validated	p.L72V	0.996	256	0%	169	40.2%	64	50%	benign(0.099)	deleterious(0.03)	neutral(0.372)	NULL
PI4KB	5298	genome.wustl.edu	37	1	151271530	151271530	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002651.1	-1	provisional	p.R602Q	1.000	64	0%	34	52.9%	41	17%	possibly_damaging(0.827)	tolerated(0.36)	neutral(0.334)	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like)
PI4KB	5298	genome.wustl.edu	37	1	151288273	151288273	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002651.1	-1	provisional	p.R241*	1.000	61	0%	34	47.1%	34	14.7%	-	-	-	NULL
PI4KB	5298	genome.wustl.edu	37	1	151288385	151288385	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002651.1	-1	provisional	p.G203	0.860	40	0%	21	23.8%	35	11.4%	-	-	-	NULL
RFX5	5993	genome.wustl.edu	37	1	151315145	151315145	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000449.3	-1	reviewed	p.E456D	0.734	46	0%	35	31.4%	18	22.2%	benign(0.001)	tolerated(0.07)	neutral(0.319)	NULL
PSMB4	5692	genome.wustl.edu	37	1	151372945	151372945	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002796.2	+1	reviewed	p.G125	0.898	95	0%	75	48%	474	47.6%	-	-	-	HMMPfam_Proteasome,superfamily_SSF56235
POGZ	23126	genome.wustl.edu	37	1	151395901	151395901	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015100.2	-1	reviewed	p.E550	1.000	159	0%	75	48%	19	52.6%	-	-	-	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
POGZ	23126	genome.wustl.edu	37	1	151397476	151397476	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015100.2	-1	reviewed	p.C380	1.000	111	0%	47	10.6%	16	6.2%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
CGN	57530	genome.wustl.edu	37	1	151498226	151498226	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020770.2	+1	validated	p.F575L	1.000	88	0%	51	47.1%	10	40%	possibly_damaging(0.495)	tolerated(0.82)	neutral(0.166)	NULL
CELF3	11189	genome.wustl.edu	37	1	151677565	151677565	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000420342	-1	known	p.A451V	1.000	25	0%	25	28%	0	-	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
CELF3	11189	genome.wustl.edu	37	1	151678369	151678369	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007185.4	-1	reviewed	p.F400C	1.000	112	0%	95	47.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
OAZ3	51686	genome.wustl.edu	37	1	151739265	151739265	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016178.2	+1	reviewed	p.N23T	1.000	158	0%	106	43.4%	0	-	possibly_damaging(0.643)	deleterious(0)	deleterious(0.670)	NULL
TDRKH	11022	genome.wustl.edu	37	1	151751698	151751698	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083963.1	-1	validated	p.R148C	1.000	299	0.3%	157	42%	6	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
LINGO4	339398	genome.wustl.edu	37	1	151773920	151773920	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004432.2	-1	provisional	p.R421*	0.967	17	0%	13	38.5%	0	-	-	-	-	HMMPfam_I-set,superfamily_SSF48726
LINGO4	339398	genome.wustl.edu	37	1	151774896	151774896	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004432.2	-1	provisional	p.Q95	1.000	19	0%	35	40%	2	100%	-	-	-	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058
TCHHL1	126637	genome.wustl.edu	37	1	152058065	152058065	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008536.1	-1	provisional	p.E698G	0.000	365	0%	206	39.8%	0	-	benign(0.04)	tolerated(0.08)	neutral(0.302)	NULL
RPTN	126638	genome.wustl.edu	37	1	152127512	152127512	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122965.1	-1	validated	p.H688R	0.004	298	0%	197	43.1%	0	-	probably_damaging(0.999)	tolerated(0.43)	deleterious(0.504)	NULL
HRNR	388697	genome.wustl.edu	37	1	152191188	152191188	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009931.1	-1	validated	p.H973Y	0.000	136	0%	119	37%	0	-	unknown(0)	-	-	NULL
HRNR	388697	genome.wustl.edu	37	1	152192427	152192427	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009931.1	-1	validated	p.P560S	0.000	81	0%	87	36.8%	0	-	unknown(0)	-	-	NULL
HRNR	388697	genome.wustl.edu	37	1	152193103	152193103	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009931.1	-1	validated	p.S334	0.000	36	0%	35	45.7%	0	-	-	-	-	NULL
FLG	2312	genome.wustl.edu	37	1	152275657	152275657	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002016.1	-1	reviewed	p.P3902L	0.005	102	0%	63	41.3%	3	66.6%	unknown(0)	tolerated(0.07)	-	NULL
FLG	2312	genome.wustl.edu	37	1	152275888	152275888	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002016.1	-1	reviewed	p.H3825R	0.001	122	0%	94	33%	0	-	possibly_damaging(0.873)	tolerated(0.09)	deleterious(0.635)	HMMPfam_Filaggrin
FLG	2312	genome.wustl.edu	37	1	152277644	152277644	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002016.1	-1	reviewed	p.R3240C	0.001	125	0.8%	103	44.7%	2	0%	unknown(0)	tolerated(0.14)	-	NULL
FLG	2312	genome.wustl.edu	37	1	152284104	152284104	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002016.1	-1	reviewed	p.V1086	0.000	101	0%	99	39.4%	0	-	-	-	-	NULL
FLG	2312	genome.wustl.edu	37	1	152285087	152285087	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002016.1	-1	reviewed	p.T759A	0.000	128	0%	108	40.7%	0	-	probably_damaging(0.972)	tolerated(0.66)	neutral(0.416)	NULL
FLG	2312	genome.wustl.edu	37	1	152285426	152285426	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002016.1	-1	reviewed	p.H646N	0.000	214	0.5%	145	42.8%	1	100%	possibly_damaging(0.943)	tolerated(0.53)	neutral(0.395)	NULL
FLG2	388698	genome.wustl.edu	37	1	152327668	152327668	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014342.2	-1	provisional	p.S865L	0.018	123	0.8%	73	84.9%	0	-	unknown(0)	tolerated(0.67)	-	NULL
FLG2	388698	genome.wustl.edu	37	1	152327998	152327998	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014342.2	-1	provisional	p.S755F	0.002	219	0%	115	42.6%	0	-	unknown(0)	tolerated(0.06)	-	NULL
FLG2	388698	genome.wustl.edu	37	1	152329039	152329039	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014342.2	-1	provisional	p.S408Y	0.005	117	0%	67	50.7%	0	-	unknown(0)	tolerated(0.15)	-	NULL
LCE3B	353143	genome.wustl.edu	37	1	152586479	152586479	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178433.1	+1	validated	p.R65*	0.055	12	0%	22	95.5%	0	-	-	-	-	NULL
LCE6A	448835	genome.wustl.edu	37	1	152816018	152816018	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128600.1	+1	validated	p.S8T	0.001	160	0%	69	44.9%	0	-	benign(0.053)	-	-	NULL
IVL	3713	genome.wustl.edu	37	1	152883915	152883915	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005547.2	+1	reviewed	p.A548T	0.000	48	0%	41	12.2%	1	100%	probably_damaging(0.98)	deleterious(0.03)	deleterious(0.788)	NULL
SPRR2G	6706	genome.wustl.edu	37	1	153122493	153122493	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014291.3	-1	validated	p.C32R	0.004	80	0%	70	48.6%	0	-	unknown(0)	-	-	NULL
S100A12	6283	genome.wustl.edu	37	1	153346500	153346500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000368736	-1	known	p.K52N	0.000	91	0%	63	38.1%	0	-	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	superfamily_SSF47473
S100A5	6276	genome.wustl.edu	37	1	153509849	153509849	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002962.1	-1	reviewed	p.D86N	1.000	79	0%	84	45.2%	0	-	probably_damaging(1)	tolerated(0.23)	deleterious(0.541)	PatternScan_S100_CABP,PatternScan_EF_HAND_1,superfamily_SSF47473
S100A3	6274	genome.wustl.edu	37	1	153520312	153520312	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002960.1	-1	reviewed	p.R51Q	0.003	98	0%	71	47.9%	6	16.6%	possibly_damaging(0.793)	tolerated(0.21)	neutral(0.342)	superfamily_SSF47473
SLC27A3	11000	genome.wustl.edu	37	1	153749015	153749015	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024330.1	+1	provisional	p.P277L	0.990	18	0%	29	51.7%	15	66.6%	probably_damaging(0.982)	deleterious(0.03)	deleterious(0.791)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
SLC27A3	11000	genome.wustl.edu	37	1	153750664	153750664	+	Missense_Mutation	SNP	C	C	T	rs148542939		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024330.1	+1	provisional	p.R444W	0.999	15	0%	11	63.6%	37	43.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
GATAD2B	57459	genome.wustl.edu	37	1	153789957	153789957	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020699.2	-1	validated	p.R264H	1.000	67	0%	60	36.7%	16	37.5%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ENSG00000234010	0	genome.wustl.edu	37	1	153896130	153896130	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000413970	+1	known	NULL	0.001	33	0%	25	52%	1	0%	-	-	-	-
ENSG00000234010	0	genome.wustl.edu	37	1	153896184	153896184	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000413970	+1	known	NULL	0.001	42	0%	32	34.4%	1	100%	-	-	-	-
DENND4B	9909	genome.wustl.edu	37	1	153903495	153903495	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014856.2	-1	validated	p.R1348W	1.000	32	0%	29	55.2%	35	54.2%	probably_damaging(0.966)	deleterious(0.01)	deleterious(0.814)	NULL
DENND4B	9909	genome.wustl.edu	37	1	153905466	153905466	+	Missense_Mutation	SNP	G	G	A	rs1122186		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014856.2	-1	validated	p.S1165L	1.000	22	0%	34	44.1%	24	41.6%	probably_damaging(0.957)	tolerated(0.22)	neutral(0.443)	NULL
CRTC2	200186	genome.wustl.edu	37	1	153923928	153923928	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181715.1	-1	provisional	p.S404	0.290	31	0%	33	30.3%	41	39%	-	-	-	NULL
CREB3L4	148327	genome.wustl.edu	37	1	153945521	153945521	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130898.2	+1	provisional	p.R237L	1.000	74	0%	66	47%	51	47%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_BRLZ,superfamily_Euk_transcr_DNA,HMMPfam_bZIP_1
UBAP2L	9898	genome.wustl.edu	37	1	154229706	154229706	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000433615	+1	known	p.D106N	0.123	131	0%	81	18.5%	158	8.2%	-	-	-	NULL
UBAP2L	9898	genome.wustl.edu	37	1	154235616	154235616	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127320.1	+1	provisional	p.T980	1.000	240	0%	135	13.3%	33	3%	-	-	-	NULL
AQP10	89872	genome.wustl.edu	37	1	154295498	154295498	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080429.2	+1	reviewed	p.I91	0.827	72	0%	60	48.3%	0	-	-	-	-	HMMPfam_MIP,superfamily_Aquaporin-like
AQP10	89872	genome.wustl.edu	37	1	154296072	154296072	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080429.2	+1	reviewed	p.G166D	1.000	49	0%	41	34.1%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_MIP,superfamily_Aquaporin-like
ATP8B2	57198	genome.wustl.edu	37	1	154317883	154317883	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020452.3	+1	reviewed	p.F885	1.000	154	0%	105	21%	2	50%	-	-	-	superfamily_SSF56784,superfamily_SSF81665
ATP8B2	57198	genome.wustl.edu	37	1	154318754	154318754	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020452.3	+1	reviewed	p.P975	0.297	41	0%	35	37.1%	11	27.2%	-	-	-	superfamily_SSF81665
TDRD10	126668	genome.wustl.edu	37	1	154479736	154479736	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098475.1	+1	validated	p.P8S	0.003	127	0%	78	24.4%	0	-	benign(0)	-	-	NULL
ADAR	103	genome.wustl.edu	37	1	154574188	154574188	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111.3	-1	reviewed	p.V310	0.002	99	0%	83	43.4%	31	35.4%	-	-	-	"HMMPfam_z-alpha,HMMSmart_SM00550,superfamily_""Winged helix"" DNA-binding domain"
PMVK	10654	genome.wustl.edu	37	1	154897659	154897659	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006556.3	-1	validated	p.Q175H	0.031	74	0%	66	48.5%	90	38.8%	benign(0)	tolerated(0.15)	neutral(0.241)	superfamily_P-loop containing nucleoside triphosphate hydrolases
PBXIP1	57326	genome.wustl.edu	37	1	154918280	154918280	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020524.2	-1	provisional	p.A624T	0.967	21	0%	28	46.4%	55	38.1%	possibly_damaging(0.433)	tolerated(0.26)	neutral(0.175)	NULL
PBXIP1	57326	genome.wustl.edu	37	1	154918947	154918947	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020524.2	-1	provisional	p.Q401	1.000	22	0%	33	51.5%	30	56.6%	-	-	-	NULL
PBXIP1	57326	genome.wustl.edu	37	1	154920468	154920468	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020524.2	-1	provisional	p.E219D	0.440	42	0%	37	56.8%	23	56.5%	benign(0)	tolerated(0.49)	neutral(0.011)	NULL
SHC1	6464	genome.wustl.edu	37	1	154938818	154938818	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130040.1	-1	validated	p.P387S	0.715	32	0%	34	38.2%	36	47.2%	benign(0)	tolerated(0.96)	-	NULL
ZBTB7B	51043	genome.wustl.edu	37	1	154988976	154988976	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015872.2	+1	validated	p.A479T	0.586	21	0%	20	25%	46	34.7%	benign(0.008)	tolerated(0.69)	neutral(0.002)	NULL
DCST1	149095	genome.wustl.edu	37	1	155011963	155011963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152494.2	+1	validated	p.G116D	1.000	42	0%	54	46.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DCST1	149095	genome.wustl.edu	37	1	155020362	155020362	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152494.2	+1	validated	p.G571D	0.052	64	0%	78	17.9%	0	-	possibly_damaging(0.465)	tolerated(0.22)	neutral(0.195)	HMMPfam_DC_STAMP
DCST1	149095	genome.wustl.edu	37	1	155020629	155020629	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152494.2	+1	validated	p.R618*	0.000	52	0%	40	52.5%	0	-	-	-	-	NULL
ADAM15	8751	genome.wustl.edu	37	1	155025094	155025094	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000485346	+1	known	NULL	0.004	13	0%	14	71.4%	0	-	-	-	-	-
THBS3	7059	genome.wustl.edu	37	1	155167413	155167413	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007112.3	-1	reviewed	p.T780	0.999	71	0%	45	35.6%	9	11.1%	-	-	-	HMMPfam_TSP_C,superfamily_Concanavalin A-like lectins/glucanases
THBS3	7059	genome.wustl.edu	37	1	155168004	155168004	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007112.3	-1	reviewed	p.G694	0.979	35	0%	42	52.4%	10	40%	-	-	-	HMMPfam_TSP_3,superfamily_TSP type-3 repeat
GBAP1	2630	genome.wustl.edu	37	1	155186235	155186235	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000368374	-1	known	p.H191	0.000	69	0%	46	45.7%	14	21.4%	-	-	-	HMMPfam_Glyco_hydro_30,superfamily_(Trans)glycosidases
FAM189B	10712	genome.wustl.edu	37	1	155217611	155217611	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006589.2	-1	validated	p.L657I	1.000	11	0%	15	33.3%	25	48%	possibly_damaging(0.806)	deleterious(0)	deleterious(0.748)	NULL
FAM189B	10712	genome.wustl.edu	37	1	155223524	155223524	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006589.2	-1	validated	e5-1	1.000	50	0%	41	31.7%	0	-	-	-	-	-
HCN3	57657	genome.wustl.edu	37	1	155252294	155252294	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020897.1	+1	validated	p.P124L	1.000	54	0%	59	50.8%	5	40%	benign(0)	tolerated(0.72)	neutral(0.002)	HMMPfam_Ion_trans_N,superfamily_SSF81324
PKLR	5313	genome.wustl.edu	37	1	155263331	155263331	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000392414	-1	known	p.A381V	0.538	35	0%	30	43.3%	0	-	-	-	-	HMMPfam_PK,superfamily_Phosphoenolpyruvate/pyruvate domain
PKLR	5313	genome.wustl.edu	37	1	155271182	155271182	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000298.5	-1	reviewed	p.S2L	0.899	99	0%	77	36.4%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
ASH1L	55870	genome.wustl.edu	37	1	155448093	155448093	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018489.2	-1	reviewed	p.A1523V	0.999	200	0%	92	43.5%	6	50%	benign(0)	tolerated(0.05)	neutral(0.345)	NULL
ASH1L	55870	genome.wustl.edu	37	1	155450448	155450448	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018489.2	-1	reviewed	p.R738I	1.000	209	0%	66	39.4%	6	33.3%	possibly_damaging(0.92)	deleterious(0)	deleterious(0.816)	NULL
ASH1L	55870	genome.wustl.edu	37	1	155450884	155450884	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018489.2	-1	reviewed	p.E593K	1.000	124	0%	49	46.9%	3	33.3%	possibly_damaging(0.647)	deleterious(0)	deleterious(0.671)	NULL
ASH1L	55870	genome.wustl.edu	37	1	155451054	155451054	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018489.2	-1	reviewed	p.G536D	1.000	272	0%	121	14%	6	16.6%	possibly_damaging(0.612)	deleterious(0.01)	deleterious(0.618)	NULL
MSTO1	55154	genome.wustl.edu	37	1	155582701	155582701	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018116.2	+1	validated	p.R345C	1.000	219	0%	173	49.1%	28	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Tubulin nucleotide-binding domain-like
YY1AP1	55249	genome.wustl.edu	37	1	155646354	155646354	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139118.1	-1	reviewed	p.Q169H	1.000	257	0%	143	33.6%	33	36.3%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
GON4L	54856	genome.wustl.edu	37	1	155727017	155727017	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037533.1	-1	validated	p.M1784T	1.000	71	0%	52	38.5%	15	60%	benign(0.27)	tolerated(0.1)	neutral(0.316)	NULL
GON4L	54856	genome.wustl.edu	37	1	155742898	155742898	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037533.1	-1	validated	p.K818N	0.994	193	0%	103	37.9%	12	41.6%	benign(0.019)	tolerated(0.61)	neutral(0.005)	NULL
SYT11	23208	genome.wustl.edu	37	1	155838466	155838466	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152280.4	+1	reviewed	p.F249V	1.000	47	0%	31	35.5%	2	50%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
KIAA0907	22889	genome.wustl.edu	37	1	155899515	155899515	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014949.2	-1	predicted	p.Q124H	1.000	279	0%	155	43.9%	17	41.1%	benign(0.091)	tolerated(0.55)	neutral(0.013)	superfamily_Eukaryotic type KH-domain (KH-domain type I)
RXFP4	339403	genome.wustl.edu	37	1	155912034	155912034	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181885.2	+1	validated	p.V178	1.000	6	0.000	10	0.400	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
ARHGEF2	9181	genome.wustl.edu	37	1	155920230	155920230	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004723.3	-1	validated	p.R888H	0.998	24	0%	20	40%	24	50%	probably_damaging(0.989)	tolerated(0.15)	deleterious(0.680)	NULL
UBQLN4	56893	genome.wustl.edu	37	1	156020912	156020912	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020131.3	-1	provisional	p.A156V	0.997	19	0%	22	22.7%	32	21.8%	unknown(0)	tolerated(0.3)	-	NULL
LMNA	4000	genome.wustl.edu	37	1	156104704	156104704	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170707.2	+1	reviewed	p.A250T	1.000	25	0%	24	50%	173	46.2%	benign(0.124)	tolerated(0.28)	neutral(0.042)	HMMPfam_Filament
BGLAP	632	genome.wustl.edu	37	1	156212601	156212601	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199173.3	+1	validated	p.R51H	1.000	52	0%	71	11.3%	13	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00069
C1orf85	112770	genome.wustl.edu	37	1	156263901	156263901	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144580.1	-1	provisional	p.L236M	1.000	17	0%	13	38.5%	45	40%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	NULL
C1orf85	112770	genome.wustl.edu	37	1	156264638	156264638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144580.1	-1	provisional	p.S97N	0.697	32	0%	17	35.3%	18	55.5%	possibly_damaging(0.786)	tolerated(0.26)	neutral(0.329)	NULL
IQGAP3	128239	genome.wustl.edu	37	1	156498384	156498384	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178229.4	-1	validated	p.K1530N	1.000	96	0%	55	32.7%	20	35%	possibly_damaging(0.804)	tolerated(0.06)	deleterious(0.625)	HMMPfam_RasGAP_C
IQGAP3	128239	genome.wustl.edu	37	1	156513781	156513781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178229.4	-1	validated	p.R841M	1.000	60	0%	37	32.4%	15	40%	possibly_damaging(0.903)	deleterious(0)	deleterious(0.802)	HMMPfam_IQ,HMMSmart_IQ
IQGAP3	128239	genome.wustl.edu	37	1	156520073	156520073	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178229.4	-1	validated	p.D602G	1.000	42	0%	34	44.1%	16	25%	possibly_damaging(0.594)	tolerated(0.15)	neutral(0.446)	NULL
TTC24	164118	genome.wustl.edu	37	1	156551248	156551248	+	Missense_Mutation	SNP	G	G	A	rs192869620	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000368237	+1	known	p.R31Q	0.000	29	0%	25	48%	0	-	benign(0.005)	tolerated(0.27)	neutral(0.034)	superfamily_SSF48452
TTC24	164118	genome.wustl.edu	37	1	156551507	156551507	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000368237	+1	known	p.G117	0.098	13	0%	10	40%	0	-	-	-	-	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452
TTC24	164118	genome.wustl.edu	37	1	156555563	156555563	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000340086	+1	known	p.R278H	0.001	66	0%	67	49.3%	0	-	-	-	-	NULL
APOA1BP	128240	genome.wustl.edu	37	1	156563770	156563770	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144772.2	+1	reviewed	p.R254H	1.000	60	0%	53	37.7%	141	34%	possibly_damaging(0.672)	deleterious(0)	deleterious(0.682)	superfamily_YjeF N-terminal domain-like
BCAN	63827	genome.wustl.edu	37	1	156618552	156618552	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021948.3	+1	validated	p.R321H	1.000	9	0.000	20	0.250	0	-	possibly_damaging(0.676)	deleterious(0.03)	deleterious(0.605)	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,superfamily_C-type lectin-like
NES	10763	genome.wustl.edu	37	1	156639152	156639152	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006617.1	-1	reviewed	p.E1610K	0.040	38	0%	25	40%	3	66.6%	probably_damaging(0.996)	tolerated(0.05)	deleterious(0.807)	NULL
NES	10763	genome.wustl.edu	37	1	156641687	156641687	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006617.1	-1	reviewed	p.R765*	0.000	253	0%	149	47.7%	3	0%	-	-	-	NULL
ISG20L2	81875	genome.wustl.edu	37	1	156697336	156697336	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030980.1	-1	provisional	p.R37W	0.987	34	0%	30	40%	22	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
INSRR	3645	genome.wustl.edu	37	1	156812979	156812979	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014215.1	-1	validated	p.I981M	0.941	64	0%	54	38.9%	0	-	benign(0.002)	tolerated(0.49)	neutral(0.011)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
NTRK1	4914	genome.wustl.edu	37	1	156834164	156834164	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002529.3	+1	reviewed	p.Q77H	0.043	36	0%	43	37.2%	0	-	benign(0.037)	deleterious(0.02)	neutral(0.385)	superfamily_L domain-like
NTRK1	4914	genome.wustl.edu	37	1	156849886	156849886	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002529.3	+1	reviewed	p.G714	0.630	8	0.000	7	0.571	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
PEAR1	375033	genome.wustl.edu	37	1	156883505	156883505	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080471.1	+1	provisional	p.S889N	0.991	20	0%	30	40%	1	0%	benign(0.244)	deleterious(0.04)	neutral(0.373)	NULL
LRRC71	149499	genome.wustl.edu	37	1	156899111	156899111	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144702.2	+1	validated	p.E346K	0.178	105	0%	88	45.5%	0	-	benign(0.071)	tolerated(0.15)	neutral(0.246)	superfamily_RNI-like
ARHGEF11	9826	genome.wustl.edu	37	1	156925503	156925503	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198236.1	-1	reviewed	p.S587Y	0.998	362	0.3%	230	50.9%	11	45.4%	possibly_damaging(0.605)	deleterious(0)	deleterious(0.654)	NULL
ARHGEF11	9826	genome.wustl.edu	37	1	156948167	156948167	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198236.1	-1	reviewed	p.A113	1.000	97	0%	63	52.4%	15	26.6%	-	-	-	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ
ETV3L	440695	genome.wustl.edu	37	1	157062754	157062754	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004341.2	-1	validated	p.E258G	0.637	12	0%	15	26.7%	0	-	possibly_damaging(0.915)	deleterious(0)	deleterious(0.811)	NULL
FCRL4	83417	genome.wustl.edu	37	1	157557348	157557348	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031282.2	-1	reviewed	p.L189I	0.949	108	0%	38	39.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Immunoglobulin
FCRL3	115352	genome.wustl.edu	37	1	157659643	157659643	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052939.3	-1	reviewed	p.L585	0.000	82	0%	58	43.1%	0	-	-	-	-	NULL
CD1D	912	genome.wustl.edu	37	1	158150895	158150895	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001766.3	+1	reviewed	p.G2R	0.000	7	0.000	8	0.625	0	-	benign(0.052)	tolerated(0.89)	neutral(0.003)	NULL
CD1D	912	genome.wustl.edu	37	1	158151449	158151449	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001766.3	+1	reviewed	p.R89Q	0.000	17	0%	29	55.2%	1	0%	benign(0.071)	tolerated(0.47)	neutral(0.016)	HMMPfam_MHC_I,superfamily_MHC_I/II-like_Ag-recog
CD1C	911	genome.wustl.edu	37	1	158260938	158260938	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001765.2	+1	reviewed	p.V26I	0.000	59	0%	43	44.2%	0	-	benign(0.001)	tolerated(1)	-	superfamily_MHC_I/II-like_Ag-recog
OR10K2	391107	genome.wustl.edu	37	1	158389825	158389825	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004476.1	-1	provisional	p.Y278H	0.626	209	0%	52	50%	0	-	benign(0.052)	deleterious(0)	neutral(0.448)	HMMPfam_7tm_1,superfamily_SSF81321
OR6Y1	391112	genome.wustl.edu	37	1	158517052	158517052	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005189.1	-1	provisional	p.L282F	0.944	231	0%	87	34.5%	0	-	possibly_damaging(0.631)	tolerated(0.75)	neutral(0.222)	HMMPfam_7tm_1,superfamily_SSF81321
OR10Z1	128368	genome.wustl.edu	37	1	158576679	158576679	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004478.1	+1	provisional	p.T151A	0.002	143	0%	37	21.6%	0	-	benign(0)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_SSF81321
SPTA1	6708	genome.wustl.edu	37	1	158587840	158587840	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003126.2	-1	reviewed	p.Y2179	0.997	153	0%	47	44.7%	0	-	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158590251	158590251	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003126.2	-1	reviewed	p.E2042D	1.000	73	0%	30	33.3%	0	-	possibly_damaging(0.903)	tolerated(0.22)	neutral(0.400)	superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158631155	158631155	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003126.2	-1	reviewed	p.V837F	1.000	392	0.3%	261	39.5%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
OR6K6	128371	genome.wustl.edu	37	1	158724754	158724754	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005184.1	+1	provisional	p.R50I	0.204	240	0%	130	47.7%	0	-	benign(0.008)	tolerated(0.1)	neutral(0.286)	superfamily_Family A G protein-coupled receptor-like
OR6N2	81442	genome.wustl.edu	37	1	158747105	158747105	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005278.1	-1	provisional	p.L107	0.344	84	0%	55	41.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR6N2	81442	genome.wustl.edu	37	1	158747277	158747277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005278.1	-1	provisional	p.R50Q	0.000	42	0%	25	44%	0	-	probably_damaging(0.99)	tolerated(0.4)	neutral(0.458)	HMMPfam_7tm_1,superfamily_SSF81321
PYHIN1	149628	genome.wustl.edu	37	1	158908914	158908914	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152501.3	+1	validated	p.S152	0.000	97	0%	75	48%	1	0%	-	-	-	NULL
PYHIN1	149628	genome.wustl.edu	37	1	158911911	158911911	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152501.3	+1	validated	p.T242A	1.000	132	0%	57	43.9%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_HIN
PYHIN1	149628	genome.wustl.edu	37	1	158911976	158911976	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152501.3	+1	validated	p.F263L	0.002	109	0%	45	46.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HIN
AIM2	9447	genome.wustl.edu	37	1	159033350	159033350	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004833.1	-1	reviewed	p.R311*	0.002	515	0%	285	41.8%	0	-	-	-	-	HMMPfam_HIN
CADM3	57863	genome.wustl.edu	37	1	159162383	159162383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021189.3	+1	validated	p.R116Q	1.000	123	0%	82	31.7%	0	-	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
DARC	2532	genome.wustl.edu	37	1	159175324	159175324	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122951.1	+1	reviewed	p.V34A	0.000	81	0%	60	45%	1	0%	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
DARC	2532	genome.wustl.edu	37	1	159175868	159175868	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122951.1	+1	reviewed	p.A215	0.387	54	0%	50	20%	6	0%	-	-	-	NULL
OR10J1	26476	genome.wustl.edu	37	1	159336155	159336155	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000328408	+1	known	p.S69P	0.001	14	0%	15	46.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR10J1	26476	genome.wustl.edu	37	1	159410073	159410073	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012351.2	+1	validated	p.F175	0.043	142	0%	90	42.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
VSIG8	391123	genome.wustl.edu	37	1	159824795	159824795	+	Silent	SNP	C	C	T	rs142265803	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013661.1	-1	provisional	p.G331	0.998	3	0.000	11	0.364	0	-	-	-	-	NULL
CCDC19	25790	genome.wustl.edu	37	1	159846490	159846490	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012337.2	-1	validated	p.R403H	1.000	110	0%	77	42.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CCDC19	25790	genome.wustl.edu	37	1	159854247	159854247	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012337.2	-1	validated	p.Q292	1.000	196	0%	116	50%	0	-	-	-	-	NULL
CCDC19	25790	genome.wustl.edu	37	1	159863009	159863009	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012337.2	-1	validated	p.V30	0.954	83	0%	50	30%	1	0%	-	-	-	NULL
CCDC19	25790	genome.wustl.edu	37	1	159863074	159863074	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012337.2	-1	validated	p.L9M	0.140	72	0%	52	42.3%	0	-	benign(0.174)	tolerated(0.41)	neutral(0.031)	NULL
IGSF9	57549	genome.wustl.edu	37	1	159901045	159901045	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135050.1	-1	validated	p.S507N	1.000	29	0%	26	46.2%	17	52.9%	possibly_damaging(0.94)	deleterious(0.02)	deleterious(0.768)	NULL
SLAMF9	89886	genome.wustl.edu	37	1	159923255	159923255	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033438.3	-1	reviewed	p.N79D	0.000	142	0%	105	39%	0	-	benign(0.044)	tolerated(0.75)	neutral(0.004)	superfamily_Immunoglobulin
KCNJ10	3766	genome.wustl.edu	37	1	160011249	160011249	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002241.3	-1	reviewed	p.E358D	1.000	88	0%	54	42.6%	0	-	probably_damaging(0.999)	tolerated(0.14)	deleterious(0.740)	HMMPfam_IRK
ATP1A2	477	genome.wustl.edu	37	1	160094133	160094133	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000702.3	+1	reviewed	p.E181D	1.000	108	0%	65	43.1%	1	0%	benign(0.011)	tolerated(0.16)	neutral(0.060)	HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF81665
ATP1A2	477	genome.wustl.edu	37	1	160100313	160100313	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000702.3	+1	reviewed	p.L585F	1.000	51	0%	47	40.4%	0	-	benign(0.291)	deleterious(0.02)	deleterious(0.473)	HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81660,superfamily_SSF81665
ATP1A4	480	genome.wustl.edu	37	1	160134168	160134168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144699.3	+1	reviewed	p.G334D	1.000	187	0%	139	38.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M
CASQ1	844	genome.wustl.edu	37	1	160162630	160162630	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001231.4	+1	reviewed	p.F100	0.974	120	0%	87	57.5%	1	0%	-	-	-	HMMPfam_Calsequestrin,superfamily_Thiordxn-like_fd
PEX19	5824	genome.wustl.edu	37	1	160254895	160254895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002857.3	-1	reviewed	p.G7D	0.000	42	0%	33	45.5%	12	41.6%	benign(0.001)	tolerated(0.77)	neutral(0.001)	NULL
COPA	1314	genome.wustl.edu	37	1	160260410	160260410	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098398.1	-1	reviewed	p.H1172Y	1.000	74	0%	67	41.8%	247	40%	benign(0.266)	tolerated(1)	neutral(0.028)	HMMPfam_COPI_C
COPA	1314	genome.wustl.edu	37	1	160275322	160275322	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098398.1	-1	reviewed	p.N532T	1.000	106	0%	74	13.5%	137	10.2%	benign(0)	tolerated(1)	-	HMMPfam_Coatomer_WDAD
NCSTN	23385	genome.wustl.edu	37	1	160321124	160321124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015331.2	+1	reviewed	p.R232Q	1.000	51	0%	16	43.8%	55	45.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NHLH1	4807	genome.wustl.edu	37	1	160340807	160340807	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005598.3	+1	validated	p.A96T	1.000	31	0%	22	45.5%	0	-	probably_damaging(0.965)	tolerated(0.23)	neutral(0.448)	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
LOC100287088	100287088	genome.wustl.edu	37	1	160389262	160389262	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342147.1	-1	model	p.R45*	0.257	46	0%	33	36.4%	21	47.6%	-	-	-	NULL
ITLN2	142683	genome.wustl.edu	37	1	160922440	160922440	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080878.2	-1	validated	p.E55*	1.000	230	0%	146	43.8%	0	-	-	-	-	superfamily_Fibrinogen C-terminal domain-like
USF1	7391	genome.wustl.edu	37	1	161012364	161012364	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007122.3	-1	reviewed	p.R52Q	1.000	26	0%	31	41.9%	33	48.4%	probably_damaging(0.958)	deleterious(0.02)	deleterious(0.784)	NULL
ARHGAP30	257106	genome.wustl.edu	37	1	161022121	161022121	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025598.1	-1	validated	p.A325T	1.000	63	0%	81	40.7%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ARHGAP30	257106	genome.wustl.edu	37	1	161023138	161023138	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025598.1	-1	validated	p.A192S	1.000	48	0%	45	31.1%	3	0%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMSmart_SM00324,superfamily_GTPase activation domain GAP
KLHDC9	126823	genome.wustl.edu	37	1	161069916	161069916	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152366.4	+1	validated	p.R318C	0.987	88	0%	73	41.1%	16	50%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	superfamily_Galactose oxidase central domain
DEDD	9191	genome.wustl.edu	37	1	161093690	161093690	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039711.1	-1	reviewed	p.R124	1.000	178	0.6%	128	46.1%	25	52%	-	-	-	NULL
USP21	27005	genome.wustl.edu	37	1	161130906	161130906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014443.2	+1	reviewed	p.R159H	0.999	17	0%	24	58.3%	31	38.7%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
B4GALT3	8703	genome.wustl.edu	37	1	161141721	161141721	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003779.2	-1	reviewed	p.R356H	0.924	68	0%	39	43.6%	50	28%	possibly_damaging(0.438)	tolerated(0.1)	neutral(0.429)	NULL
B4GALT3	8703	genome.wustl.edu	37	1	161143648	161143648	+	Splice_Site	SNP	C	C	T	rs111476933		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003779.2	-1	reviewed	e3+1	1.000	107	0%	78	42.3%	9	100%	-	-	-	-
ADAMTS4	9507	genome.wustl.edu	37	1	161166070	161166070	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005099.4	-1	reviewed	p.C327	0.989	48	0%	55	41.8%	6	0%	-	-	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAMTS4	9507	genome.wustl.edu	37	1	161166529	161166529	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005099.4	-1	reviewed	p.R259C	1.000	49	0%	43	51.2%	10	0%	benign(0.018)	deleterious(0.01)	neutral(0.406)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
TOMM40L	84134	genome.wustl.edu	37	1	161196690	161196690	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032174.4	+1	validated	p.A43V	0.926	213	0%	104	41.3%	5	20%	benign(0)	tolerated(0.89)	-	HMMPfam_Porin_3
MPZ	4359	genome.wustl.edu	37	1	161276519	161276519	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000530.6	-1	reviewed	p.T153A	1.000	140	0.7%	102	47.1%	1	0%	possibly_damaging(0.49)	deleterious(0.03)	deleterious(0.527)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
SDHC	6391	genome.wustl.edu	37	1	161332315	161332315	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035511.1	+1	reviewed	p.F146L	0.001	453	0%	227	22.9%	107	44.8%	benign(0.017)	-	-	NULL
FCGR2A	2212	genome.wustl.edu	37	1	161479740	161479740	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136219.1	+1	reviewed	p.F165L	0.005	168	0%	88	51.1%	8	0%	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
ATF6	22926	genome.wustl.edu	37	1	161761276	161761276	+	Missense_Mutation	SNP	G	G	T	rs2070150	byCluster;byFrequency;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007348.2	+1	validated	p.A145S	0.972	450	0.2%	166	45.8%	2	0%	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
ATF6	22926	genome.wustl.edu	37	1	161771972	161771972	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007348.2	+1	validated	p.V273	0.004	100	0%	56	50%	9	11.1%	-	-	-	NULL
ATF6	22926	genome.wustl.edu	37	1	161789498	161789498	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007348.2	+1	validated	p.E329*	1.000	139	0%	59	49.2%	10	0%	-	-	-	HMMSmart_BRLZ,HMMPfam_bZIP_1
OLFML2B	25903	genome.wustl.edu	37	1	161989912	161989912	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015441.1	-1	provisional	p.C79R	1.000	42	0%	35	34.3%	8	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DDR2	4921	genome.wustl.edu	37	1	162737043	162737043	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014796.1	+1	reviewed	p.S396I	1.000	145	0.7%	59	39%	4	0%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
DDR2	4921	genome.wustl.edu	37	1	162740096	162740096	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014796.1	+1	reviewed	p.S433Y	1.000	62	0%	44	45.5%	3	66.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
RGS5	8490	genome.wustl.edu	37	1	163131754	163131754	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003617.3	-1	validated	p.D56	0.229	66	0%	35	54.3%	38	44.7%	-	-	-	superfamily_Regulator of G-protein signaling RGS
PBX1	5087	genome.wustl.edu	37	1	164768975	164768975	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002585.2	+1	validated	p.R184*	1.000	18	0%	17	47.1%	19	5.2%	-	-	-	HMMPfam_PBC
PBX1	5087	genome.wustl.edu	37	1	164789393	164789393	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002585.2	+1	validated	p.A361V	1.000	101	0%	68	44.1%	9	33.3%	benign(0.058)	tolerated(0.07)	neutral(0.323)	NULL
RXRG	6258	genome.wustl.edu	37	1	165406407	165406407	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009598.1	-1	reviewed	p.L27	0.111	136	0%	81	48.1%	0	-	-	-	-	NULL
LRRC52	440699	genome.wustl.edu	37	1	165532950	165532950	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005214.3	+1	validated	p.R277	0.651	30	0%	21	52.4%	0	-	-	-	-	NULL
POGK	57645	genome.wustl.edu	37	1	166810319	166810319	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017542.3	+1	reviewed	p.G42	0.233	39	0%	42	23.8%	18	11.1%	-	-	-	superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
POGK	57645	genome.wustl.edu	37	1	166818510	166818510	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017542.3	+1	reviewed	p.R232*	0.189	11	0%	18	55.6%	21	47.6%	-	-	-	HMMPfam_BrkDBD
POGK	57645	genome.wustl.edu	37	1	166819432	166819432	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017542.3	+1	reviewed	p.A539V	0.843	27	0%	21	57.1%	38	50%	probably_damaging(0.98)	tolerated(0.34)	neutral(0.447)	HMMPfam_DDE
MAEL	84944	genome.wustl.edu	37	1	166974629	166974629	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032858.1	+1	validated	p.N280	1.000	200	0%	71	35.2%	1	0%	-	-	-	NULL
DUSP27	92235	genome.wustl.edu	37	1	167064093	167064093	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080426.1	+1	provisional	p.T3A	0.971	39	0%	33	36.4%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
DUSP27	92235	genome.wustl.edu	37	1	167095439	167095439	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080426.1	+1	provisional	p.G357	0.562	20	0%	28	60.7%	0	-	-	-	-	NULL
POU2F1	5451	genome.wustl.edu	37	1	167382294	167382294	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002697.2	+1	provisional	p.L622M	1.000	80	0%	42	14.3%	5	0%	unknown(0)	deleterious(0)	-	NULL
RCSD1	92241	genome.wustl.edu	37	1	167663456	167663456	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052862.3	+1	validated	p.R131*	0.001	33	0%	26	46.2%	3	0%	-	-	-	NULL
RCSD1	92241	genome.wustl.edu	37	1	167666876	167666876	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052862.3	+1	validated	p.L339M	0.001	30	0%	23	39.1%	2	0%	benign(0.057)	tolerated(0.13)	neutral(0.256)	NULL
ADCY10	55811	genome.wustl.edu	37	1	167849796	167849796	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018417.4	-1	reviewed	p.E358K	0.845	121	0%	62	43.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Guanylate_cyc,superfamily_Adenylyl and guanylyl cyclase catalytic domain
TBX19	9095	genome.wustl.edu	37	1	168250431	168250431	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005149.2	+1	reviewed	p.D35N	1.000	49	2%	23	39.1%	3	0%	possibly_damaging(0.929)	deleterious(0.03)	deleterious(0.740)	NULL
TBX19	9095	genome.wustl.edu	37	1	168260493	168260493	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005149.2	+1	reviewed	p.R100H	1.000	11	0%	12	33.3%	3	33.3%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd
TBX19	9095	genome.wustl.edu	37	1	168260558	168260558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005149.2	+1	reviewed	p.V122I	1.000	18	0%	22	40.9%	8	25%	benign(0.018)	tolerated(0.1)	neutral(0.287)	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd
TBX19	9095	genome.wustl.edu	37	1	168274422	168274422	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005149.2	+1	reviewed	p.H302N	0.998	49	2%	45	53.3%	1	100%	possibly_damaging(0.807)	tolerated(0.82)	neutral(0.304)	NULL
TBX19	9095	genome.wustl.edu	37	1	168282031	168282031	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005149.2	+1	reviewed	p.A380T	0.009	25	0%	26	26.9%	3	0%	benign(0)	tolerated(0.45)	neutral(0.012)	NULL
XCL1	6375	genome.wustl.edu	37	1	168550443	168550443	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002995.1	+1	provisional	p.V110	0.001	317	0%	138	19.6%	6	16.6%	-	-	-	superfamily_Chemokine_IL8
SLC19A2	10560	genome.wustl.edu	37	1	169437456	169437456	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006996.2	-1	reviewed	p.Y420H	1.000	62	0%	38	39.5%	16	43.7%	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	PatternScan_G_PROTEIN_RECEP_F1_1,HMMPfam_Folate_carrier,superfamily_MFS general substrate transporter
F5	2153	genome.wustl.edu	37	1	169484809	169484809	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000130.4	-1	reviewed	p.T2134M	0.999	154	0.6%	43	55.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,superfamily_Galactose-binding domain-like
C1orf112	55732	genome.wustl.edu	37	1	169775211	169775211	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018186.2	+1	predicted	p.T182I	1.000	569	0%	243	44.9%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C1orf112	55732	genome.wustl.edu	37	1	169798423	169798423	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018186.2	+1	predicted	p.V383I	0.987	423	0%	143	42%	3	66.6%	benign(0)	tolerated(0.57)	neutral(0.006)	NULL
C1orf112	55732	genome.wustl.edu	37	1	169818643	169818643	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018186.2	+1	predicted	p.D687	0.983	204	0%	96	39.6%	6	33.3%	-	-	-	NULL
C1orf112	55732	genome.wustl.edu	37	1	169818721	169818721	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018186.2	+1	predicted	p.L713F	1.000	215	0%	84	42.9%	7	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIFAP3	22920	genome.wustl.edu	37	1	169961361	169961361	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014970.2	-1	reviewed	p.L407I	1.000	389	0%	95	48.4%	23	47.8%	possibly_damaging(0.91)	deleterious(0.01)	deleterious(0.768)	HMMSmart_SM00185,HMMPfam_KAP,superfamily_ARM repeat
METTL11B	149281	genome.wustl.edu	37	1	170115396	170115396	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136107.1	+1	validated	p.P50T	1.000	239	0.4%	104	12.5%	1	0%	benign(0.23)	deleterious(0.01)	neutral(0.429)	superfamily_SSF53335
PRRX1	5396	genome.wustl.edu	37	1	170695471	170695471	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022716.2	+1	reviewed	p.E176D	1.000	34	0%	25	44%	17	47%	probably_damaging(0.971)	deleterious(0.03)	deleterious(0.777)	NULL
C1orf129	80133	genome.wustl.edu	37	1	170928657	170928657	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025063.2	+1	validated	p.S69	0.744	455	0%	247	45.7%	0	-	-	-	-	NULL
C1orf129	80133	genome.wustl.edu	37	1	170934338	170934338	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025063.2	+1	validated	p.R141I	0.001	199	0%	64	34.4%	0	-	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	NULL
LOC646804	646804	genome.wustl.edu	37	1	171052746	171052746	+	Silent	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_929761.3	+1	model	p.V38	0.801	108	0%	49	16.3%	0	-	-	-	-	NULL
FMO2	2327	genome.wustl.edu	37	1	171174718	171174718	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001460.2	+1	reviewed	p.G376	0.861	78	0%	19	52.6%	14	85.7%	-	-	-	HMMPfam_FMO-like
FMO1	2326	genome.wustl.edu	37	1	171250083	171250083	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002021.1	+1	reviewed	p.N262	0.998	147	0%	42	42.9%	1	0%	-	-	-	HMMPfam_FMO-like,superfamily_NAD(P)-binding Rossmann-fold domains
PRRC2C	23215	genome.wustl.edu	37	1	171510660	171510660	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015172.3	+1	validated	p.R1350H	1.000	33	0%	20	30%	21	14.2%	unknown(0)	-	-	NULL
PRRC2C	23215	genome.wustl.edu	37	1	171511177	171511177	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015172.3	+1	validated	p.Q1522H	0.918	109	0%	54	44.4%	26	57.6%	unknown(0)	-	-	NULL
PRRC2C	23215	genome.wustl.edu	37	1	171556853	171556853	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015172.3	+1	validated	p.A2677T	0.096	163	0%	85	38.8%	37	32.4%	benign(0.031)	-	-	NULL
MYOC	4653	genome.wustl.edu	37	1	171605378	171605378	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000261.1	-1	reviewed	p.I401T	1.000	114	0%	68	29.4%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_OLF,HMMSmart_SM00284
METTL13	51603	genome.wustl.edu	37	1	171761223	171761223	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015935.4	+1	validated	p.H514R	1.000	90	0%	54	40.7%	23	30.4%	benign(0.326)	tolerated(0.35)	neutral(0.122)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
PIGC	5279	genome.wustl.edu	37	1	172411180	172411180	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002642.3	-1	reviewed	p.R195W	1.000	62	0%	37	45.9%	32	53.1%	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	HMMPfam_GPI2
FASLG	356	genome.wustl.edu	37	1	172628574	172628574	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000639.1	+1	reviewed	p.S78I	0.524	98	0%	103	14.6%	0	-	benign(0.029)	deleterious(0)	neutral(0.446)	NULL
SLC9A11	284525	genome.wustl.edu	37	1	173523948	173523948	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178527.3	-1	validated	p.I407M	0.291	254	0.4%	87	31%	0	-	benign(0.291)	tolerated(0.09)	neutral(0.386)	HMMPfam_Na_H_Exchanger
DARS2	55157	genome.wustl.edu	37	1	173803639	173803639	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018122.4	+1	reviewed	p.L215	0.956	439	0%	208	20.7%	11	18.1%	-	-	-	HMMPfam_tRNA-synt_2,superfamily_SSF55681
SERPINC1	462	genome.wustl.edu	37	1	173883970	173883970	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000488.3	-1	reviewed	p.K43N	1.000	49	0%	40	17.5%	0	-	unknown(0)	deleterious(0)	-	superfamily_Prot_inh_serpin
RC3H1	149041	genome.wustl.edu	37	1	173930905	173930905	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172071.2	-1	validated	p.P720	0.999	272	0%	153	11.8%	8	37.5%	-	-	-	NULL
RC3H1	149041	genome.wustl.edu	37	1	173952657	173952657	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172071.2	-1	validated	p.R164Q	1.000	106	0%	71	47.9%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TNN	63923	genome.wustl.edu	37	1	175067519	175067519	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022093.1	+1	validated	p.A636D	0.751	83	0%	70	47.1%	0	-	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
PAPPA2	60676	genome.wustl.edu	37	1	176564029	176564029	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020318.2	+1	validated	p.S430L	0.001	39	0%	32	43.8%	1	0%	possibly_damaging(0.926)	tolerated(0.07)	deleterious(0.694)	HMMSmart_SM00560,superfamily_Concanavalin A-like lectins/glucanases
PAPPA2	60676	genome.wustl.edu	37	1	176708761	176708761	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020318.2	+1	validated	e12-1	1.000	103	0%	19	42.1%	0	-	-	-	-	-
PAPPA2	60676	genome.wustl.edu	37	1	176738812	176738812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020318.2	+1	validated	p.G1465S	0.967	168	0%	78	39.7%	0	-	possibly_damaging(0.728)	tolerated(0.06)	deleterious(0.588)	HMMSmart_SM00032,superfamily_Complement control module/SCR domain
ASTN1	460	genome.wustl.edu	37	1	176852085	176852085	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004319.1	-1	validated	p.S1091F	1.000	108	0%	61	59%	1	100%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_FN3,superfamily_FN_III-like
FAM5B	57795	genome.wustl.edu	37	1	177242630	177242630	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021165.2	+1	provisional	p.E226K	1.000	129	0%	42	52.4%	0	-	benign(0.032)	deleterious(0.02)	neutral(0.385)	HMMSmart_SM00457
RASAL2	9462	genome.wustl.edu	37	1	178427157	178427157	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000433130	+1	known	p.L320I	1.000	69	0%	47	42.6%	7	28.5%	-	-	-	NULL
RASAL2	9462	genome.wustl.edu	37	1	178442259	178442259	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170692.2	+1	reviewed	p.A1232V	1.000	70	0%	62	38.7%	12	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
C1orf49	84066	genome.wustl.edu	37	1	178489920	178489920	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032126.4	+1	validated	p.A152S	0.000	33	0%	26	34.6%	0	-	benign(0.079)	tolerated(0.06)	neutral(0.328)	NULL
ANGPTL1	9068	genome.wustl.edu	37	1	178822767	178822767	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004673.3	-1	reviewed	p.G327S	1.000	161	0%	69	27.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Fibrinogen_C,HMMSmart_FBG,superfamily_Fibrinogen_a/b/g_C
ANGPTL1	9068	genome.wustl.edu	37	1	178834562	178834562	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004673.3	-1	reviewed	p.K117R	1.000	224	0%	116	50%	0	-	probably_damaging(0.999)	tolerated(0.46)	deleterious(0.502)	NULL
FAM20B	9917	genome.wustl.edu	37	1	179013026	179013026	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014864.3	+1	validated	p.V15A	1.000	153	0%	98	51%	11	81.8%	benign(0.079)	deleterious(0.03)	neutral(0.370)	NULL
FAM20B	9917	genome.wustl.edu	37	1	179023737	179023737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014864.3	+1	validated	p.A180T	1.000	151	0%	78	14.1%	14	35.7%	probably_damaging(0.986)	deleterious(0.01)	deleterious(0.840)	NULL
ABL2	27	genome.wustl.edu	37	1	179112088	179112088	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005158.4	-1	reviewed	p.S31F	0.000	94	0%	69	55.1%	0	-	benign(0.076)	deleterious(0)	neutral(0.450)	NULL
AXDND1	126859	genome.wustl.edu	37	1	179460848	179460848	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144696.4	+1	validated	p.Y756C	0.006	147	0%	81	33.3%	0	-	unknown(0)	tolerated(0.19)	-	NULL
TOR1AIP1	26092	genome.wustl.edu	37	1	179886640	179886640	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015602.2	+1	validated	p.L340	0.014	190	0%	67	44.8%	16	37.5%	-	-	-	HMMPfam_LAP1C
CEP350	9857	genome.wustl.edu	37	1	179965735	179965735	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014810.4	+1	reviewed	p.S148L	0.998	121	0%	58	50%	1	0%	benign(0.002)	deleterious(0.03)	neutral(0.364)	NULL
CEP350	9857	genome.wustl.edu	37	1	179981097	179981097	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014810.4	+1	reviewed	p.R427Q	1.000	130	0%	61	39.3%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CEP350	9857	genome.wustl.edu	37	1	179989939	179989939	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014810.4	+1	reviewed	p.E1010D	0.983	88	0%	43	51.2%	1	0%	benign(0.418)	tolerated(0.4)	neutral(0.152)	NULL
CEP350	9857	genome.wustl.edu	37	1	180010297	180010297	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014810.4	+1	reviewed	p.D1379Y	1.000	116	0%	57	31.6%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LHX4	89884	genome.wustl.edu	37	1	180243631	180243631	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033343.2	+1	reviewed	p.S364P	1.000	56	0%	30	53.3%	2	50%	possibly_damaging(0.476)	tolerated(0.05)	deleterious(0.502)	NULL
XPR1	9213	genome.wustl.edu	37	1	180756935	180756935	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004736.3	+1	validated	p.E56D	1.000	342	0%	105	54.3%	32	40.6%	possibly_damaging(0.894)	deleterious(0)	deleterious(0.796)	HMMPfam_SPX
CACNA1E	777	genome.wustl.edu	37	1	181686301	181686301	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000721.2	+1	reviewed	p.R463M	0.999	84	0%	61	45.9%	0	-	possibly_damaging(0.806)	deleterious(0)	deleterious(0.748)	superfamily_Voltage-gated potassium channels
RNASEL	6041	genome.wustl.edu	37	1	182553226	182553226	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021133.2	-1	reviewed	p.R519K	0.000	275	0%	97	34%	1	100%	benign(0.002)	tolerated(0.42)	neutral(0.014)	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
NPL	80896	genome.wustl.edu	37	1	182787787	182787787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030769.1	+1	provisional	p.R190H	0.713	90	0%	45	60%	0	-	benign(0.003)	tolerated(0.14)	neutral(0.249)	HMMPfam_DHDPS,superfamily_Aldolase
NPL	80896	genome.wustl.edu	37	1	182791308	182791308	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030769.1	+1	provisional	p.D238N	0.998	540	0%	230	38.7%	0	-	possibly_damaging(0.712)	tolerated(0.21)	neutral(0.301)	HMMPfam_DHDPS,superfamily_Aldolase
DHX9	1660	genome.wustl.edu	37	1	182821399	182821399	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001357.4	+1	reviewed	p.P95H	0.966	115	0%	63	46%	39	35.8%	benign(0.11)	tolerated(0.16)	neutral(0.068)	NULL
SHCBP1L	81626	genome.wustl.edu	37	1	182908447	182908447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030933.2	-1	validated	p.R314C	1.000	251	0.4%	136	43.4%	0	-	probably_damaging(0.999)	tolerated(0.15)	deleterious(0.732)	NULL
LAMC1	3915	genome.wustl.edu	37	1	183079782	183079782	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002293.3	+1	reviewed	p.E338	0.984	94	0%	63	39.7%	56	8.9%	-	-	-	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,superfamily_SSF57196
LAMC1	3915	genome.wustl.edu	37	1	183101588	183101588	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002293.3	+1	reviewed	p.T1207M	1.000	279	0%	123	45.5%	119	45.3%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
LAMC1	3915	genome.wustl.edu	37	1	183104222	183104222	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002293.3	+1	reviewed	p.A1349T	1.000	61	0%	57	56.1%	81	60.4%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
LAMC2	3918	genome.wustl.edu	37	1	183201845	183201845	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005562.2	+1	reviewed	p.Y691	0.904	79	0%	38	36.8%	20	50%	-	-	-	NULL
NMNAT2	23057	genome.wustl.edu	37	1	183261986	183261986	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015039.2	-1	reviewed	p.V61M	1.000	21	0%	23	52.2%	2	100%	possibly_damaging(0.757)	deleterious(0.01)	deleterious(0.685)	HMMPfam_CTP_transf_2,superfamily_Nucleotidylyl transferase
SMG7	9887	genome.wustl.edu	37	1	183514220	183514220	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173156.2	+1	validated	p.H715Y	1.000	119	0%	70	38.6%	35	48.5%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
SMG7	9887	genome.wustl.edu	37	1	183514352	183514352	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000515829	+1	known	p.A461V	0.998	189	0%	89	48.3%	27	33.3%	-	-	-	NULL
NCF2	4688	genome.wustl.edu	37	1	183534884	183534884	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000433.3	-1	reviewed	p.A319S	0.999	40	0%	21	23.8%	3	0%	benign(0.309)	tolerated(0.7)	neutral(0.099)	superfamily_SH3
NCF2	4688	genome.wustl.edu	37	1	183543658	183543658	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000433.3	-1	reviewed	p.R155	0.994	270	0%	155	47.7%	4	0%	-	-	-	superfamily_SSF48452
RGL1	23179	genome.wustl.edu	37	1	183711363	183711363	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015149.3	+1	validated	p.S24N	0.560	153	0%	47	38.3%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
FAM129A	116496	genome.wustl.edu	37	1	184772792	184772792	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052966.2	-1	validated	p.K494T	0.995	281	0%	148	39.2%	10	10%	benign(0.397)	deleterious(0.05)	deleterious(0.473)	NULL
TRMT1L	81627	genome.wustl.edu	37	1	185114649	185114649	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030934.4	-1	reviewed	p.I193L	1.000	447	0%	151	11.3%	7	14.2%	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
IVNS1ABP	10625	genome.wustl.edu	37	1	185267381	185267381	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006469.4	-1	validated	p.A572V	1.000	192	0%	57	36.8%	173	41%	benign(0.032)	tolerated(0.1)	neutral(0.288)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
IVNS1ABP	10625	genome.wustl.edu	37	1	185276739	185276739	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006469.4	-1	validated	p.R138Q	1.000	216	0%	73	58.9%	60	38.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_BACK
HMCN1	83872	genome.wustl.edu	37	1	185976350	185976350	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031935.2	+1	reviewed	p.R1522	1.000	198	0%	68	47.1%	1	100%	-	-	-	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	185985096	185985096	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031935.2	+1	reviewed	p.P1639L	1.000	83	0%	30	53.3%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_I-set
HMCN1	83872	genome.wustl.edu	37	1	185988735	185988735	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031935.2	+1	reviewed	p.A1845T	1.000	96	0%	42	47.6%	2	50%	benign(0)	tolerated(1)	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	186017961	186017961	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031935.2	+1	reviewed	p.V2189	1.000	265	0%	56	32.1%	1	0%	-	-	-	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	186037119	186037119	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031935.2	+1	reviewed	p.R2620Q	0.024	237	0%	77	44.2%	1	0%	benign(0.022)	tolerated(0.61)	neutral(0.005)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	186043908	186043908	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031935.2	+1	reviewed	p.A2725	0.978	235	0%	61	41%	3	33.3%	-	-	-	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	186089254	186089254	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031935.2	+1	reviewed	p.G4069D	1.000	89	0%	38	44.7%	3	33.3%	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	186114998	186114998	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031935.2	+1	reviewed	p.R4851C	0.997	39	0%	18	27.8%	6	16.6%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
TPR	7175	genome.wustl.edu	37	1	186312593	186312593	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003292.2	-1	reviewed	p.R1205	1.000	234	0%	106	52.8%	14	35.7%	-	-	-	HMMPfam_TPR_MLP1_2
TPR	7175	genome.wustl.edu	37	1	186326532	186326532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003292.2	-1	reviewed	p.S574F	0.998	355	0%	122	36.1%	16	31.2%	probably_damaging(0.961)	tolerated(0.06)	deleterious(0.727)	NULL
TPR	7175	genome.wustl.edu	37	1	186329129	186329129	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003292.2	-1	reviewed	e12-1	1.000	263	0%	101	50.5%	0	-	-	-	-	-
PTGS2	5743	genome.wustl.edu	37	1	186643703	186643703	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000963.2	-1	reviewed	p.P533S	1.000	143	0%	93	41.9%	3	100%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
PLA2G4A	5321	genome.wustl.edu	37	1	186908254	186908254	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024420.2	+1	reviewed	p.Q270	1.000	360	0%	140	46.4%	1	0%	-	-	-	HMMPfam_PLA2_B,HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like
FAM5C	339479	genome.wustl.edu	37	1	190067703	190067703	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199051.1	-1	provisional	p.E582	1.000	117	0%	121	66.1%	0	-	-	-	-	NULL
RGS18	64407	genome.wustl.edu	37	1	192127819	192127819	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130782.2	+1	reviewed	p.E18*	1.000	209	0%	95	34.7%	0	-	-	-	-	NULL
RGS1	5996	genome.wustl.edu	37	1	192544938	192544938	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002922.3	+1	reviewed	p.I6V	0.673	108	0%	42	35.7%	9	0%	benign(0.034)	deleterious(0)	neutral(0.447)	NULL
RGS13	6003	genome.wustl.edu	37	1	192613507	192613507	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002927.3	+1	reviewed	p.E15*	0.037	377	0%	172	30.8%	0	-	-	-	-	NULL
RGS13	6003	genome.wustl.edu	37	1	192627455	192627455	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002927.3	+1	reviewed	p.K84N	1.000	173	0%	82	31.7%	0	-	benign(0.09)	tolerated(0.13)	neutral(0.259)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
UCHL5	51377	genome.wustl.edu	37	1	193018894	193018894	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015984.2	-1	validated	p.T76	0.129	107	0.9%	82	26.8%	27	37%	-	-	-	HMMPfam_Peptidase_C12,superfamily_Cysteine proteinases
B3GALT2	8707	genome.wustl.edu	37	1	193149624	193149624	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003783.3	-1	reviewed	p.P357S	1.000	159	0%	101	18.8%	0	-	possibly_damaging(0.744)	tolerated(0.29)	neutral(0.302)	HMMPfam_Galactosyl_T
KCNT2	343450	genome.wustl.edu	37	1	196459012	196459012	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198503.2	-1	validated	p.Y77*	1.000	457	0.4%	180	28.3%	0	-	-	-	-	NULL
CFH	3075	genome.wustl.edu	37	1	196645184	196645184	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000186.3	+1	reviewed	p.P139H	0.979	487	0%	238	28.2%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CFH	3075	genome.wustl.edu	37	1	196646629	196646629	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000186.3	+1	reviewed	p.A151T	0.003	246	0%	87	28.7%	9	22.2%	benign(0.002)	tolerated(0.46)	neutral(0.012)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CFH	3075	genome.wustl.edu	37	1	196712687	196712687	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000186.3	+1	reviewed	p.P1080L	0.003	585	0.2%	453	25.4%	8	12.5%	benign(0.004)	tolerated(0.43)	neutral(0.013)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
F13B	2165	genome.wustl.edu	37	1	197009796	197009796	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001994.2	-1	reviewed	p.R603I	0.990	330	0%	141	31.9%	0	-	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	superfamily_Complement_control_module
ASPM	259266	genome.wustl.edu	37	1	197062190	197062190	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.R3096*	1.000	169	0%	50	14%	7	0%	-	-	-	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPM	259266	genome.wustl.edu	37	1	197062287	197062287	+	Silent	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.I3063	0.028	181	0%	46	34.8%	15	53.3%	-	-	-	HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPM	259266	genome.wustl.edu	37	1	197071194	197071194	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.R2396M	0.925	208	0%	52	38.5%	10	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPM	259266	genome.wustl.edu	37	1	197072058	197072058	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.R2108K	0.697	201	0.5%	65	12.3%	11	36.3%	benign(0.002)	tolerated(0.72)	neutral(0.002)	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPM	259266	genome.wustl.edu	37	1	197073484	197073484	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.R1633C	0.129	232	0%	77	13%	4	25%	probably_damaging(0.996)	tolerated(0.1)	deleterious(0.748)	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPM	259266	genome.wustl.edu	37	1	197086988	197086988	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.Q1332	0.881	642	0%	216	30.6%	4	50%	-	-	-	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPM	259266	genome.wustl.edu	37	1	197102522	197102522	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.R793W	0.533	291	0%	170	52.9%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Calponin-homology domain CH-domain
ASPM	259266	genome.wustl.edu	37	1	197111545	197111545	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.A613T	0.003	622	0%	501	26.1%	5	0%	benign(0)	tolerated(1)	-	NULL
ASPM	259266	genome.wustl.edu	37	1	197112654	197112654	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018136.4	-1	reviewed	p.R243Q	0.000	215	0%	157	34.4%	4	25%	benign(0.038)	tolerated(0.16)	neutral(0.061)	NULL
ZBTB41	360023	genome.wustl.edu	37	1	197128828	197128828	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194314.2	-1	validated	p.T797	0.032	355	0.8%	228	26.8%	5	60%	-	-	-	NULL
ZBTB41	360023	genome.wustl.edu	37	1	197168985	197168985	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194314.2	-1	validated	p.H207N	1.000	145	0%	109	23.9%	2	50%	possibly_damaging(0.494)	deleterious(0)	deleterious(0.609)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CRB1	23418	genome.wustl.edu	37	1	197297597	197297597	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201253.1	+1	reviewed	p.C39Y	1.000	188	0%	110	31.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00181,superfamily_EGF/Laminin
CRB1	23418	genome.wustl.edu	37	1	197390141	197390141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201253.1	+1	reviewed	p.E395K	1.000	216	0%	130	26.9%	0	-	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin
CRB1	23418	genome.wustl.edu	37	1	197404469	197404469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201253.1	+1	reviewed	p.S1159N	0.198	121	0%	54	51.9%	0	-	benign(0.01)	tolerated(1)	neutral(0.001)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
DENND1B	163486	genome.wustl.edu	37	1	197643297	197643297	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142795.1	-1	validated	p.E43D	1.000	211	0%	78	32.1%	3	100%	possibly_damaging(0.919)	tolerated(0.15)	deleterious(0.611)	HMMPfam_uDENN,HMMSmart_SM00800
DENND1B	163486	genome.wustl.edu	37	1	197742058	197742058	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142795.1	-1	validated	p.N8H	1.000	247	0%	185	62.7%	1	100%	benign(0.322)	tolerated(0.09)	neutral(0.397)	NULL
LHX9	56956	genome.wustl.edu	37	1	197890485	197890485	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020204.2	+1	reviewed	p.S143	0.004	16	0%	28	25%	2	0%	-	-	-	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
PTPRC	5788	genome.wustl.edu	37	1	198691593	198691593	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002838.3	+1	reviewed	p.H568N	0.000	476	0%	174	58%	2	0%	benign(0.001)	tolerated(0.34)	neutral(0.023)	superfamily_Fibronectin type III
PTPRC	5788	genome.wustl.edu	37	1	198721462	198721462	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002838.3	+1	reviewed	p.T1096S	0.001	248	0%	71	31%	11	0%	benign(0.002)	tolerated(0.67)	neutral(0.003)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRC	5788	genome.wustl.edu	37	1	198723414	198723414	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002838.3	+1	reviewed	p.T1174A	1.000	331	0%	92	35.9%	6	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
NR5A2	2494	genome.wustl.edu	37	1	200014674	200014674	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205860.1	+1	validated	p.R142H	1.000	283	0%	197	27.9%	14	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
ZNF281	23528	genome.wustl.edu	37	1	200378251	200378251	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012482.3	-1	provisional	p.V195I	0.650	87	0%	91	37.4%	7	42.8%	benign(0.038)	tolerated(0.15)	neutral(0.243)	NULL
KIF14	9928	genome.wustl.edu	37	1	200573037	200573037	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014875.2	-1	validated	p.R598Q	1.000	374	0%	214	58.9%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540
KIF14	9928	genome.wustl.edu	37	1	200587073	200587073	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014875.2	-1	validated	p.G260E	0.875	526	0%	412	26.7%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DDX59	83479	genome.wustl.edu	37	1	200618320	200618320	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031725.4	-1	validated	p.F450S	1.000	360	0%	262	61.1%	11	72.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX59	83479	genome.wustl.edu	37	1	200635471	200635471	+	Missense_Mutation	SNP	G	G	A	rs186153048	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031725.4	-1	validated	p.A133V	1.000	152	0%	104	30.8%	20	15%	possibly_damaging(0.932)	deleterious(0.01)	deleterious(0.784)	HMMPfam_zf-HIT,superfamily_P-loop containing nucleoside triphosphate hydrolases
CAMSAP2	23271	genome.wustl.edu	37	1	200811203	200811203	+	Missense_Mutation	SNP	C	C	T	rs188044529	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203459.1	+1	validated	p.R337C	0.001	648	0%	463	63.9%	21	66.6%	possibly_damaging(0.946)	deleterious(0.03)	deleterious(0.754)	NULL
C1orf106	55765	genome.wustl.edu	37	1	200860791	200860791	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018265.2	+1	validated	p.A41	0.558	9	0.000	26	0.462	2	0%	-	-	-	NULL
CACNA1S	779	genome.wustl.edu	37	1	201012450	201012450	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000069.2	-1	reviewed	p.A1669	0.625	103	0%	126	13.5%	0	-	-	-	-	NULL
CACNA1S	779	genome.wustl.edu	37	1	201013539	201013539	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000069.2	-1	reviewed	p.R1572C	1.000	42	0%	46	28.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CACNA1S	779	genome.wustl.edu	37	1	201030395	201030395	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000069.2	-1	reviewed	p.Q1085	1.000	136	0%	160	25.6%	0	-	-	-	-	NULL
CACNA1S	779	genome.wustl.edu	37	1	201030577	201030577	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000069.2	-1	reviewed	p.D1025Y	1.000	182	0%	185	64.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
CACNA1S	779	genome.wustl.edu	37	1	201058412	201058412	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000069.2	-1	reviewed	p.E292K	1.000	22	0%	41	14.6%	0	-	possibly_damaging(0.866)	deleterious(0)	deleterious(0.780)	HMMPfam_Ion_trans,superfamily_SSF81324
CACNA1S	779	genome.wustl.edu	37	1	201058451	201058451	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000069.2	-1	reviewed	p.G279S	1.000	30	0%	50	38%	0	-	possibly_damaging(0.927)	tolerated(0.4)	neutral(0.391)	HMMPfam_Ion_trans,superfamily_SSF81324
CACNA1S	779	genome.wustl.edu	37	1	201060804	201060804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000069.2	-1	reviewed	p.G220C	1.000	58	0%	69	29%	0	-	benign(0.037)	tolerated(0.06)	neutral(0.325)	HMMPfam_Ion_trans,superfamily_SSF81324
IGFN1	91156	genome.wustl.edu	37	1	201174264	201174264	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000451870	+1	known	p.G324D	0.000	13	0%	20	45%	0	-	benign(0.311)	tolerated(0.81)	neutral(0.098)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
IGFN1	91156	genome.wustl.edu	37	1	201186579	201186579	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000451870	+1	known	p.P797S	0.986	14	0%	26	42.3%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
IGFN1	91156	genome.wustl.edu	37	1	201193940	201193940	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000451870	+1	known	p.T1018N	0.840	45	0%	66	33.3%	0	-	probably_damaging(0.974)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
PKP1	5317	genome.wustl.edu	37	1	201282591	201282591	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000299.2	+1	reviewed	p.R202C	0.825	26	0%	32	43.8%	17	35.2%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
PKP1	5317	genome.wustl.edu	37	1	201285794	201285794	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000299.2	+1	reviewed	p.T272I	1.000	29	0%	36	33.3%	29	31%	benign(0.174)	tolerated(0.16)	neutral(0.075)	superfamily_ARM repeat
TNNT2	7139	genome.wustl.edu	37	1	201331132	201331132	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000364.2	-1	reviewed	p.K207E	1.000	29	0%	45	24.4%	2	0%	possibly_damaging(0.762)	deleterious(0.01)	deleterious(0.688)	HMMPfam_Troponin
LAD1	3898	genome.wustl.edu	37	1	201355856	201355856	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005558.3	-1	reviewed	p.K211N	0.000	121	0%	130	32.3%	15	20%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
NAV1	89796	genome.wustl.edu	37	1	201750232	201750232	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000430015	+1	known	p.R44*	1.000	142	0%	99	39.4%	1	0%	-	-	-	NULL
NAV1	89796	genome.wustl.edu	37	1	201752815	201752815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020443.4	+1	reviewed	p.G880D	1.000	36	0%	41	29.3%	4	50%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	NULL
IPO9	55705	genome.wustl.edu	37	1	201835970	201835970	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018085.4	+1	validated	p.L580F	1.000	95	0%	82	23.2%	56	32.1%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_ARM repeat
IPO9	55705	genome.wustl.edu	37	1	201845174	201845174	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018085.4	+1	validated	p.G1040S	1.000	105	1%	88	39.8%	87	24.1%	benign(0.024)	deleterious(0.04)	neutral(0.350)	NULL
SHISA4	149345	genome.wustl.edu	37	1	201860588	201860588	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198149.2	+1	validated	p.P147S	1.000	55	0%	85	29.4%	36	22.2%	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	NULL
RNPEP	6051	genome.wustl.edu	37	1	201958566	201958566	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020216.3	+1	validated	p.P215Q	0.052	187	0%	163	31.9%	30	0%	benign(0.273)	tolerated(0.27)	neutral(0.062)	HMMPfam_Peptidase_M1,superfamily_SSF63737
RNPEP	6051	genome.wustl.edu	37	1	201965369	201965369	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020216.3	+1	validated	p.F278V	1.000	434	0%	324	11.1%	58	3.4%	benign(0.418)	tolerated(1)	neutral(0.136)	HMMPfam_Peptidase_M1,superfamily_SSF55486
RNPEP	6051	genome.wustl.edu	37	1	201966519	201966519	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020216.3	+1	validated	p.T309	0.849	45	0%	77	11.7%	66	25.7%	-	-	-	HMMPfam_Peptidase_M1,superfamily_SSF55486
RNPEP	6051	genome.wustl.edu	37	1	201972379	201972379	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020216.3	+1	validated	p.R481*	0.694	43	0%	62	21%	39	0%	-	-	-	superfamily_SSF55486
GPR37L1	9283	genome.wustl.edu	37	1	202097062	202097062	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004767.3	+1	validated	p.E275A	1.000	13	0%	28	35.7%	1	100%	benign(0.01)	tolerated(0.14)	neutral(0.250)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR37L1	9283	genome.wustl.edu	37	1	202097160	202097160	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004767.3	+1	validated	p.A308T	1.000	27	0%	40	32.5%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LGR6	59352	genome.wustl.edu	37	1	202279404	202279404	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017403.1	+1	reviewed	p.E496*	0.994	44	0%	37	21.6%	6	0%	-	-	-	superfamily_RNI-like
LGR6	59352	genome.wustl.edu	37	1	202287843	202287843	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017403.1	+1	reviewed	p.T804	0.993	21	0%	40	42.5%	27	59.2%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PPP1R12B	4660	genome.wustl.edu	37	1	202399930	202399930	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032105.2	+1	reviewed	p.F331L	1.000	320	0%	248	28.6%	1	0%	benign(0)	tolerated(0.73)	neutral(0.002)	NULL
PPP1R12B	4660	genome.wustl.edu	37	1	202409887	202409887	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032105.2	+1	reviewed	p.S504	0.704	297	0%	245	31.4%	2	0%	-	-	-	NULL
KDM5B	10765	genome.wustl.edu	37	1	202698925	202698925	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006618.3	-1	validated	p.P1469	1.000	218	0%	168	11.9%	140	12.1%	-	-	-	NULL
KDM5B	10765	genome.wustl.edu	37	1	202701051	202701051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006618.3	-1	validated	p.G1309D	0.983	191	0%	116	31%	171	30.4%	benign(0.431)	tolerated(0.15)	neutral(0.382)	NULL
KDM5B	10765	genome.wustl.edu	37	1	202702732	202702732	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006618.3	-1	validated	p.L1236F	1.000	61	0%	51	29.4%	94	26.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_FYVE/PHD zinc finger
KDM5B	10765	genome.wustl.edu	37	1	202710847	202710847	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006618.3	-1	validated	p.L865I	1.000	67	0%	47	34%	101	36.6%	probably_damaging(0.999)	tolerated(0.31)	deleterious(0.517)	HMMPfam_PLU-1
KDM5B	10765	genome.wustl.edu	37	1	202722096	202722096	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006618.3	-1	validated	p.P546	0.000	178	0%	110	34.5%	55	40%	-	-	-	HMMSmart_SM00558,HMMPfam_JmjC
KDM5B	10765	genome.wustl.edu	37	1	202736068	202736068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006618.3	-1	validated	p.R233C	1.000	218	0%	154	27.9%	40	22.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KDM5B	10765	genome.wustl.edu	37	1	202746214	202746214	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006618.3	-1	validated	p.Q71	1.000	240	0%	168	35.1%	35	37.1%	-	-	-	HMMSmart_SM00545
ADIPOR1	51094	genome.wustl.edu	37	1	202915676	202915676	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127687.1	-1	validated	p.N107	0.990	97	0%	114	33.3%	179	25.6%	-	-	-	NULL
ADIPOR1	51094	genome.wustl.edu	37	1	202915727	202915727	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127687.1	-1	validated	p.G90	0.098	75	1.3%	82	35.4%	144	30.5%	-	-	-	NULL
PPFIA4	8497	genome.wustl.edu	37	1	203013082	203013082	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000367238	+1	known	p.C120	1.000	6	0.000	7	0.571	6	33.3%	-	-	-	NULL
PPFIA4	8497	genome.wustl.edu	37	1	203033112	203033112	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015053.1	+1	validated	p.M505L	1.000	16	0%	17	29.4%	9	11.1%	benign(0.109)	deleterious(0.01)	neutral(0.414)	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
LOC100289552	100289552	genome.wustl.edu	37	1	203098119	203098119	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342158.1	-1	model	p.R241*	0.026	21	0%	35	40%	1	0%	-	-	-	NULL
CHIT1	1118	genome.wustl.edu	37	1	203186879	203186879	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003465.2	-1	reviewed	p.R382W	0.009	45	0%	64	21.9%	1	0%	possibly_damaging(0.925)	deleterious(0)	deleterious(0.818)	superfamily_(Trans)glycosidases
ATP2B4	493	genome.wustl.edu	37	1	203667386	203667386	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001684.3	+1	reviewed	p.E99*	1.000	158	0%	108	27.8%	40	2.5%	-	-	-	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M
ATP2B4	493	genome.wustl.edu	37	1	203678544	203678544	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001684.3	+1	reviewed	p.P558H	1.000	33	0%	37	35.1%	52	38.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M
ATP2B4	493	genome.wustl.edu	37	1	203690443	203690443	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001684.3	+1	reviewed	p.G906V	1.000	104	0%	82	18.3%	65	52.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cation_ATPase_C,superfamily_Calcium ATPase transmembrane domain M
REN	5972	genome.wustl.edu	37	1	204130473	204130473	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000537.3	-1	reviewed	p.S107L	1.000	33	0%	40	30%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Asp,PatternScan_ASP_PROTEASE,superfamily_Acid proteases
PPP1R15B	84919	genome.wustl.edu	37	1	204375384	204375384	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032833.3	-1	validated	p.G660R	1.000	241	0%	214	25.7%	48	35.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PP1c_bdg
NFASC	23114	genome.wustl.edu	37	1	204937425	204937425	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015090.3	+1	reviewed	p.T263I	0.243	46	0%	58	22.4%	1	0%	benign(0.321)	deleterious(0.05)	neutral(0.446)	HMMPfam_I-set,superfamily_SSF48726
CNTN2	6900	genome.wustl.edu	37	1	205030460	205030460	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005076.2	+1	reviewed	p.S295	0.745	26	0%	26	53.8%	0	-	-	-	-	HMMSmart_IGc2,HMMPfam_ig,superfamily_SSF48726
CNTN2	6900	genome.wustl.edu	37	1	205039655	205039655	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005076.2	+1	reviewed	p.L845	1.000	28	0%	29	58.6%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
RBBP5	5929	genome.wustl.edu	37	1	205057915	205057915	+	Nonstop_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005057.2	-1	reviewed	p.*539C	1.000	227	0%	125	16%	13	7.6%	-	-	-	NULL
RBBP5	5929	genome.wustl.edu	37	1	205073134	205073134	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005057.2	-1	reviewed	p.V125M	1.000	132	0%	88	29.5%	27	25.9%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_WD40 repeat-like
TMCC2	9911	genome.wustl.edu	37	1	205241027	205241027	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014858.3	+1	validated	p.E635	1.000	14	0%	24	41.7%	1	0%	-	-	-	HMMPfam_Tmemb_cc2
TMCC2	9911	genome.wustl.edu	37	1	205241065	205241065	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014858.3	+1	validated	p.N648S	1.000	28	0%	25	20%	0	-	probably_damaging(0.969)	deleterious(0.01)	deleterious(0.817)	HMMPfam_Tmemb_cc2
CDK18	5129	genome.wustl.edu	37	1	205493455	205493455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000437052	+1	known	p.A144T	0.143	23	0%	26	23.1%	31	35.4%	-	-	-	NULL
CDK18	5129	genome.wustl.edu	37	1	205499800	205499800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_212503.2	+1	validated	p.P483T	1.000	38	0%	60	11.7%	55	5.4%	benign(0.103)	deleterious(0.02)	neutral(0.391)	superfamily_Kinase_like
MFSD4	148808	genome.wustl.edu	37	1	205553091	205553091	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181644.4	+1	validated	p.V233	1.000	24	0%	31	22.6%	16	43.7%	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
SLC45A3	85414	genome.wustl.edu	37	1	205628362	205628362	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033102.2	-1	validated	p.*554	0.007	13	0%	13	46.2%	0	-	-	-	-	NULL
SLC45A3	85414	genome.wustl.edu	37	1	205628566	205628566	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033102.2	-1	validated	p.R486	0.999	11	0%	20	40%	2	0%	-	-	-	NULL
SLC45A3	85414	genome.wustl.edu	37	1	205632052	205632052	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033102.2	-1	validated	p.T289	0.796	14	0%	13	30.8%	7	57.1%	-	-	-	superfamily_MFS general substrate transporter
SLC26A9	115019	genome.wustl.edu	37	1	205889332	205889332	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_134325.2	-1	reviewed	p.G694	0.018	307	0.3%	291	14.1%	0	-	-	-	-	HMMPfam_STAS,superfamily_STAS
AVPR1B	553	genome.wustl.edu	37	1	206224656	206224656	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000707.3	+1	reviewed	p.F72	1.000	9	0.000	20	0.550	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
C1orf186	440712	genome.wustl.edu	37	1	206243161	206243161	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000331555	-1	known	p.S34N	0.996	45	0%	43	20.9%	67	26.8%	benign(0.34)	tolerated(0.22)	neutral(0.149)	NULL
CTSE	1510	genome.wustl.edu	37	1	206318357	206318357	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001910.2	+1	reviewed	p.R39W	0.000	52	0%	52	28.8%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_Pept_Aspartic,HMMPfam_A1_Propeptide
SRGAP2	23380	genome.wustl.edu	37	1	206557431	206557431	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015326.2	+1	validated	p.R77Q	1.000	244	0%	159	15.7%	13	7.6%	-	-	-	NULL
SRGAP2	23380	genome.wustl.edu	37	1	206566908	206566908	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015326.2	+1	validated	p.K151N	1.000	141	0%	100	21%	18	22.2%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	NULL
SRGAP2	23380	genome.wustl.edu	37	1	206567013	206567013	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000414359	+1	known	p.L195I	1.000	176	0%	114	20.2%	24	8.3%	probably_damaging(0.974)	tolerated(0.21)	neutral(0.460)	NULL
SRGAP2	23380	genome.wustl.edu	37	1	206574930	206574930	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000414359	+1	known	p.R251C	1.000	177	0%	150	13.3%	24	8.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PIGR	5284	genome.wustl.edu	37	1	207104894	207104894	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002644.3	-1	reviewed	p.V716A	0.000	458	0%	493	32%	61	26.2%	benign(0.003)	tolerated(0.62)	neutral(0.004)	NULL
PIGR	5284	genome.wustl.edu	37	1	207105846	207105846	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002644.3	-1	reviewed	p.A655S	0.004	18	0%	28	25%	69	33.3%	possibly_damaging(0.907)	deleterious(0.02)	deleterious(0.744)	NULL
PIGR	5284	genome.wustl.edu	37	1	207112735	207112735	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002644.3	-1	reviewed	p.T39	0.123	69	0%	93	37.6%	56	30.3%	-	-	-	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
FCAMR	83953	genome.wustl.edu	37	1	207133945	207133945	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000324852	-1	known	p.W426R	0.665	68	0%	80	18.8%	0	-	possibly_damaging(0.649)	deleterious(0)	deleterious(0.672)	NULL
FCAMR	83953	genome.wustl.edu	37	1	207139063	207139063	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122979.2	-1	validated	p.A104T	0.000	20	0%	25	36%	0	-	possibly_damaging(0.677)	tolerated(0.15)	deleterious(0.482)	NULL
C1orf116	79098	genome.wustl.edu	37	1	207196104	207196104	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023938.5	-1	validated	p.L335	0.000	58	0%	85	24.7%	4	25%	-	-	-	NULL
C4BPA	722	genome.wustl.edu	37	1	207287557	207287557	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000715.3	+1	reviewed	p.Y85	0.011	112	0%	63	22.2%	1	100%	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
C4BPA	722	genome.wustl.edu	37	1	207314569	207314569	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000715.3	+1	reviewed	p.A464	0.000	176	0.6%	115	59.1%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CR2	1380	genome.wustl.edu	37	1	207648363	207648363	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006658.2	+1	reviewed	p.R840*	0.001	116	0%	75	14.7%	2	0%	-	-	-	NULL
CR1	1378	genome.wustl.edu	37	1	207793410	207793410	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000651.4	+1	reviewed	p.R2418C	0.011	114	0%	82	28%	1	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
CR1	1378	genome.wustl.edu	37	1	207796352	207796352	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000651.4	+1	reviewed	p.T2431A	0.000	952	0.1%	491	26.1%	1	0%	benign(0.013)	tolerated(0.66)	neutral(0.003)	NULL
CR1L	1379	genome.wustl.edu	37	1	207857226	207857226	+	Silent	SNP	C	C	A	rs183127040	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175710.1	+1	validated	p.L129	0.590	565	0.2%	270	33.7%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
LOC100286909	100286909	genome.wustl.edu	37	1	207975364	207975364	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342181.1	-1	model	p.S69L	0.000	9	0.000	13	0.308	1	0%	-	-	-	NULL
CD34	947	genome.wustl.edu	37	1	208072456	208072456	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025109.1	-1	validated	p.N126	0.000	240	0%	220	32.7%	13	0%	-	-	-	NULL
PLXNA2	5362	genome.wustl.edu	37	1	208212212	208212212	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025179.3	-1	reviewed	p.V1540M	1.000	107	0%	109	29.4%	21	28.5%	benign(0.003)	tolerated(0.13)	neutral(0.253)	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
PLXNA2	5362	genome.wustl.edu	37	1	208212233	208212233	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025179.3	-1	reviewed	p.L1533I	1.000	129	0%	121	36.4%	20	40%	probably_damaging(0.972)	deleterious(0)	deleterious(0.859)	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
PLXNA2	5362	genome.wustl.edu	37	1	208212321	208212321	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025179.3	-1	reviewed	p.N1503	1.000	152	0%	164	28%	21	9.5%	-	-	-	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
CAMK1G	57172	genome.wustl.edu	37	1	209786159	209786159	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020439.2	+1	reviewed	p.V457G	0.086	125	0%	129	14%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
C1orf74	148304	genome.wustl.edu	37	1	209956503	209956503	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152485.2	-1	predicted	p.Y159	0.008	54	0%	49	40.8%	6	33.3%	-	-	-	NULL
IRF6	3664	genome.wustl.edu	37	1	209964014	209964014	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006147.2	-1	reviewed	p.D296N	1.000	33	0%	39	12.8%	69	13%	benign(0.119)	tolerated(0.24)	neutral(0.047)	superfamily_SMAD_FHA,HMMPfam_IRF-3
IRF6	3664	genome.wustl.edu	37	1	209969892	209969892	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006147.2	-1	reviewed	p.W60*	1.000	43	0%	44	40.9%	42	11.9%	-	-	-	HMMPfam_IRF,HMMSmart_IRF,PatternScan_IRF,superfamily_SSF46785
IRF6	3664	genome.wustl.edu	37	1	209974655	209974655	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006147.2	-1	reviewed	p.R35H	1.000	75	0%	57	31.6%	33	30.3%	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	HMMPfam_IRF,HMMSmart_IRF,PatternScan_IRF,superfamily_SSF46785
DIEXF	27042	genome.wustl.edu	37	1	210014329	210014329	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014388.5	+1	validated	p.L472M	0.932	211	0%	118	29.7%	8	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF1253
SYT14	255928	genome.wustl.edu	37	1	210273474	210273474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153262.2	+1	validated	p.L278M	0.903	108	0%	68	25%	0	-	possibly_damaging(0.822)	tolerated(0.08)	deleterious(0.611)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SYT14	255928	genome.wustl.edu	37	1	210273662	210273662	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153262.2	+1	validated	p.N340	1.000	139	0%	80	22.5%	0	-	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SYT14	255928	genome.wustl.edu	37	1	210329068	210329068	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153262.2	+1	validated	p.G389	1.000	184	0%	138	32.6%	3	0%	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SYT14	255928	genome.wustl.edu	37	1	210329119	210329119	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153262.2	+1	validated	p.S406	1.000	234	0%	172	29.7%	1	0%	-	-	-	NULL
HHAT	55733	genome.wustl.edu	37	1	210522330	210522330	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122834.2	+1	validated	p.R4Q	0.392	115	0%	91	63.7%	0	-	benign(0.014)	tolerated(0.41)	neutral(0.015)	NULL
HHAT	55733	genome.wustl.edu	37	1	210560817	210560817	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122834.2	+1	validated	p.A55	0.003	135	0%	114	33.3%	4	25%	-	-	-	NULL
KCNH1	3756	genome.wustl.edu	37	1	210857110	210857110	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172362.2	-1	reviewed	p.G828E	0.053	17	0%	23	30.4%	1	0%	benign(0)	tolerated(0.77)	neutral(0.001)	NULL
KCNH1	3756	genome.wustl.edu	37	1	210977367	210977367	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172362.2	-1	reviewed	p.R535Q	1.000	159	0%	102	24.5%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_cAMP-binding domain-like
RCOR3	55758	genome.wustl.edu	37	1	211444586	211444586	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136223.1	+1	validated	p.Y79C	1.000	321	0%	236	25.8%	14	7.1%	benign(0.001)	tolerated(0.07)	neutral(0.319)	HMMPfam_ELM2
TRAF5	7188	genome.wustl.edu	37	1	211544692	211544692	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033910.2	+1	reviewed	p.H327Y	0.008	268	0%	124	19.4%	10	40%	benign(0.277)	deleterious(0.03)	neutral(0.394)	NULL
NEK2	4751	genome.wustl.edu	37	1	211843721	211843721	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002497.2	-1	validated	p.E223K	1.000	293	0%	173	27.7%	25	28%	benign(0.342)	deleterious(0.03)	deleterious(0.472)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PPP2R5A	5525	genome.wustl.edu	37	1	212502578	212502578	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006243.2	+1	reviewed	p.E95*	1.000	381	0%	249	58.6%	15	40%	-	-	-	HMMPfam_B56,superfamily_ARM repeat
PPP2R5A	5525	genome.wustl.edu	37	1	212506920	212506920	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006243.2	+1	reviewed	p.A154S	1.000	200	0%	139	15.1%	16	25%	benign(0.158)	tolerated(0.28)	neutral(0.045)	HMMPfam_B56,superfamily_ARM repeat
TMEM206	55248	genome.wustl.edu	37	1	212558681	212558681	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018252.2	-1	validated	p.P144S	1.000	83	0%	76	36.8%	9	33.3%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
TATDN3	128387	genome.wustl.edu	37	1	212981113	212981113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042552.2	+1	validated	p.R175W	0.998	270	0%	278	33.8%	4	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_TatD_DNase,superfamily_Metallo-dependent hydrolases
FLVCR1	28982	genome.wustl.edu	37	1	213032341	213032341	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014053.2	+1	validated	p.L183I	1.000	6	0.000	19	0.368	8	37.5%	benign(0.155)	tolerated(0.33)	neutral(0.037)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
RPS6KC1	26750	genome.wustl.edu	37	1	213415118	213415118	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012424.3	+1	validated	p.H767N	0.102	97	0%	61	11.5%	8	0%	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
PTPN14	5784	genome.wustl.edu	37	1	214549707	214549707	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005401.4	-1	reviewed	p.A921V	0.993	403	0.2%	342	30.1%	8	50%	benign(0)	tolerated(0.27)	neutral(0.034)	HMMSmart_PTPc,superfamily_SSF52799
PTPN14	5784	genome.wustl.edu	37	1	214557518	214557518	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005401.4	-1	reviewed	p.K560N	1.000	24	0%	34	70.6%	8	62.5%	probably_damaging(0.988)	tolerated(0.07)	deleterious(0.756)	NULL
CENPF	1063	genome.wustl.edu	37	1	214787225	214787225	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016343.3	+1	reviewed	p.S43I	0.800	100	0%	64	28.1%	5	0%	benign(0.071)	deleterious(0)	neutral(0.450)	HMMPfam_Cenp-F_N
CENPF	1063	genome.wustl.edu	37	1	214818434	214818434	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016343.3	+1	reviewed	p.D1841Y	0.027	86	0%	46	34.8%	16	31.2%	possibly_damaging(0.945)	deleterious(0.04)	deleterious(0.738)	NULL
CENPF	1063	genome.wustl.edu	37	1	214818809	214818809	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016343.3	+1	reviewed	p.E1966*	1.000	94	0%	53	34%	22	9%	-	-	-	NULL
CENPF	1063	genome.wustl.edu	37	1	214819993	214819993	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016343.3	+1	reviewed	p.E2360D	0.956	30	0%	16	37.5%	31	9.6%	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	HMMPfam_Cenp-F_leu_zip
KCTD3	51133	genome.wustl.edu	37	1	215792564	215792564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016121.3	+1	validated	p.C606Y	1.000	169	0%	112	40.2%	42	40.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
USH2A	7399	genome.wustl.edu	37	1	215848694	215848694	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.R4187C	0.986	122	0.8%	84	28.6%	0	-	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	215853667	215853667	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.R4040C	0.940	228	0%	98	60.2%	0	-	benign(0.339)	tolerated(0.08)	neutral(0.407)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	215940126	215940126	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.L3648	1.000	117	0%	89	28.1%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	216073529	216073529	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.S2494	0.004	176	0%	93	39.8%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	216243491	216243491	+	Missense_Mutation	SNP	G	G	A	rs141539554	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.R2001C	0.000	145	0%	65	36.9%	0	-	possibly_damaging(0.506)	tolerated(0.07)	deleterious(0.489)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	216251691	216251691	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.S1771N	0.984	73	0%	25	32%	0	-	benign(0.001)	tolerated(0.37)	neutral(0.019)	HMMSmart_SM00282,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
USH2A	7399	genome.wustl.edu	37	1	216373338	216373338	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.P1148S	0.995	92	0%	59	32.2%	0	-	possibly_damaging(0.617)	tolerated(0.32)	neutral(0.238)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases
USH2A	7399	genome.wustl.edu	37	1	216420087	216420087	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.E883D	0.999	200	0%	113	30.1%	0	-	benign(0.033)	tolerated(0.36)	neutral(0.022)	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin
USH2A	7399	genome.wustl.edu	37	1	216498707	216498707	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206933.2	-1	reviewed	p.N361	0.500	168	0%	95	29.5%	0	-	-	-	-	HMMPfam_Laminin_N,HMMSmart_SM00136
SPATA17	128153	genome.wustl.edu	37	1	217824462	217824462	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138796.2	+1	provisional	p.I61S	0.739	372	0%	193	30.1%	6	66.6%	benign(0)	tolerated(0.18)	neutral(0.056)	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
SPATA17	128153	genome.wustl.edu	37	1	217915437	217915437	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138796.2	+1	provisional	p.K172	1.000	164	0%	122	40.2%	7	85.7%	-	-	-	NULL
TGFB2	7042	genome.wustl.edu	37	1	218607530	218607530	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135599.1	+1	validated	p.A234D	1.000	154	0%	83	26.5%	5	40%	possibly_damaging(0.745)	deleterious(0)	deleterious(0.718)	HMMPfam_TGFb_propeptide
SLC30A10	55532	genome.wustl.edu	37	1	220089055	220089055	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018713.2	-1	validated	p.L398F	0.000	80	0%	55	27.3%	0	-	possibly_damaging(0.81)	deleterious(0.02)	deleterious(0.688)	NULL
SLC30A10	55532	genome.wustl.edu	37	1	220091629	220091629	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018713.2	-1	validated	p.M309T	1.000	96	0%	83	60.2%	0	-	probably_damaging(0.995)	tolerated(1)	neutral(0.458)	HMMPfam_Cation_efflux
EPRS	2058	genome.wustl.edu	37	1	220151968	220151968	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004446.2	-1	reviewed	p.L1335I	0.997	252	0%	111	35.1%	126	36.5%	benign(0.004)	tolerated(0.19)	neutral(0.050)	HMMPfam_HGTP_anticodon,superfamily_Anticodon_bd
EPRS	2058	genome.wustl.edu	37	1	220178625	220178625	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004446.2	-1	reviewed	p.G676	0.008	420	0%	181	33.7%	53	28.3%	-	-	-	superfamily_Ribosomal_L25rel,HMMPfam_tRNA-synt_1c_C
EPRS	2058	genome.wustl.edu	37	1	220193518	220193518	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004446.2	-1	reviewed	p.I387	1.000	302	0.3%	190	28.4%	59	27.1%	-	-	-	HMMPfam_tRNA-synt_1c,superfamily_SSF52374
BPNT1	10380	genome.wustl.edu	37	1	220240733	220240733	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006085.4	-1	validated	p.L129I	1.000	340	0.3%	151	22.5%	27	25.9%	benign(0.158)	tolerated(0.11)	neutral(0.286)	HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase
IARS2	55699	genome.wustl.edu	37	1	220311314	220311314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018060.3	+1	validated	p.D702N	1.000	102	0%	104	14.4%	150	8.6%	benign(0)	tolerated(0.07)	neutral(0.319)	HMMPfam_tRNA-synt_1,superfamily_Nucleotidylyl transferase
IARS2	55699	genome.wustl.edu	37	1	220316345	220316345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018060.3	+1	validated	p.G874R	1.000	380	0.3%	287	28.2%	115	38.2%	possibly_damaging(0.855)	tolerated(0.31)	neutral(0.357)	superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_Anticodon_1
IARS2	55699	genome.wustl.edu	37	1	220316379	220316379	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018060.3	+1	validated	p.M885T	1.000	319	0%	250	34.8%	134	29.8%	benign(0.085)	deleterious(0.01)	neutral(0.412)	superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_Anticodon_1
RAB3GAP2	25782	genome.wustl.edu	37	1	220330696	220330696	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012414.3	-1	reviewed	p.H1157	1.000	100	0%	70	41.4%	27	22.2%	-	-	-	NULL
RAB3GAP2	25782	genome.wustl.edu	37	1	220383822	220383822	+	Missense_Mutation	SNP	G	G	T	rs143415462	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012414.3	-1	reviewed	p.L174I	0.998	95	0%	60	10%	24	4.1%	probably_damaging(0.993)	tolerated(0.18)	deleterious(0.506)	NULL
MARK1	4139	genome.wustl.edu	37	1	220809308	220809308	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018650.3	+1	validated	p.S470	0.078	105	0%	66	27.3%	2	100%	-	-	-	NULL
MARK1	4139	genome.wustl.edu	37	1	220826573	220826573	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018650.3	+1	validated	p.R623C	0.997	27	0%	28	28.6%	6	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
MARC1	64757	genome.wustl.edu	37	1	220978576	220978576	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022746.3	+1	validated	p.G283S	0.729	144	0%	185	10.3%	31	19.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MOSC,superfamily_PK beta-barrel domain-like
HLX	3142	genome.wustl.edu	37	1	221057749	221057749	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021958.3	+1	validated	p.D390	1.000	10	0%	17	35.3%	6	16.6%	-	-	-	NULL
DUSP10	11221	genome.wustl.edu	37	1	221879663	221879663	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007207.3	-1	reviewed	p.N319	0.712	58	0%	46	26.1%	16	18.7%	-	-	-	superfamily_(Phosphotyrosine protein) phosphatases II
DUSP10	11221	genome.wustl.edu	37	1	221912556	221912556	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007207.3	-1	reviewed	p.C177	1.000	77	0%	112	41.1%	27	40.7%	-	-	-	HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase
HHIPL2	79802	genome.wustl.edu	37	1	222716993	222716993	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024746.3	-1	validated	p.R287H	1.000	68	0%	78	35.9%	0	-	benign(0.028)	tolerated(0.1)	neutral(0.288)	superfamily_Quino_gluc_DH
TAF1A	9015	genome.wustl.edu	37	1	222750851	222750851	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005681.2	-1	reviewed	p.Q180H	1.000	374	0%	194	22.7%	4	50%	benign(0.001)	tolerated(0.38)	neutral(0.018)	NULL
TAF1A	9015	genome.wustl.edu	37	1	222761825	222761825	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005681.2	-1	reviewed	p.G27	0.997	284	0%	236	30.1%	6	33.3%	-	-	-	NULL
MIA3	375056	genome.wustl.edu	37	1	222827811	222827811	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000354906	+1	known	p.*1010Q	0.915	319	0%	226	32.7%	73	41%	-	-	-	NULL
MIA3	375056	genome.wustl.edu	37	1	222832108	222832108	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198551.2	+1	validated	p.R1551M	1.000	137	0%	121	41.3%	85	38.8%	benign(0.183)	tolerated(0.07)	neutral(0.336)	NULL
MIA3	375056	genome.wustl.edu	37	1	222832970	222832970	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198551.2	+1	validated	p.T1593A	0.003	366	0%	198	29.8%	63	25.3%	benign(0.003)	tolerated(0.79)	neutral(0.001)	NULL
DISP1	84976	genome.wustl.edu	37	1	223164932	223164932	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032890.2	+1	reviewed	p.G245E	1.000	437	0%	204	26.5%	0	-	probably_damaging(0.965)	tolerated(0.22)	neutral(0.449)	NULL
DISP1	84976	genome.wustl.edu	37	1	223176630	223176630	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032890.2	+1	reviewed	p.R631*	0.935	82	0%	82	22%	2	0%	-	-	-	HMMPfam_Patched,superfamily_SSF82866
DISP1	84976	genome.wustl.edu	37	1	223176822	223176822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032890.2	+1	reviewed	p.L695F	0.028	140	0%	120	16.7%	2	0%	benign(0.019)	tolerated(0.26)	neutral(0.035)	HMMPfam_Patched
TLR5	7100	genome.wustl.edu	37	1	223283950	223283950	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003268.5	-1	reviewed	p.G808	0.006	117	0%	103	26.2%	4	25%	-	-	-	HMMPfam_TIR,HMMSmart_TIR,superfamily_TIR
TLR5	7100	genome.wustl.edu	37	1	223285107	223285107	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003268.5	-1	reviewed	p.L423I	0.000	193	0%	130	33.8%	1	0%	benign(0.003)	tolerated(0.43)	neutral(0.013)	superfamily_SSF52058
SUSD4	55061	genome.wustl.edu	37	1	223401026	223401026	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017982.3	-1	validated	p.A324V	1.000	30	3.3%	44	27.3%	12	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
C1orf65	164127	genome.wustl.edu	37	1	223568688	223568688	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152610.2	+1	validated	p.*624	1.000	44	0%	35	25.7%	0	-	-	-	-	NULL
CAPN8	388743	genome.wustl.edu	37	1	223803731	223803731	+	Missense_Mutation	SNP	G	G	A	rs192136287	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143962.1	-1	validated	p.R418C	0.920	30	0%	38	13.2%	4	75%	benign(0.074)	deleterious(0)	neutral(0.450)	HMMPfam_Calpain_III,HMMSmart_SM00720,superfamily_Calpain large subunit middle domain (domain III)
TP53BP2	7159	genome.wustl.edu	37	1	223983821	223983821	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031685.2	-1	reviewed	p.V807A	0.000	215	0%	137	25.5%	21	38%	benign(0.001)	tolerated(0.72)	neutral(0.002)	NULL
WDR26	80232	genome.wustl.edu	37	1	224581616	224581616	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025160.6	-1	reviewed	p.I478S	1.000	75	0%	65	33.8%	73	17.8%	benign(0.001)	tolerated(0.39)	neutral(0.016)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDR26	80232	genome.wustl.edu	37	1	224599232	224599232	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025160.6	-1	reviewed	p.T205M	1.000	291	0%	176	25%	62	43.5%	possibly_damaging(0.71)	deleterious(0.03)	deleterious(0.621)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDR26	80232	genome.wustl.edu	37	1	224605963	224605963	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025160.6	-1	reviewed	p.R193G	1.000	99	0%	63	49.2%	70	47.1%	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	superfamily_WD40 repeat-like
CNIH3	149111	genome.wustl.edu	37	1	224922410	224922410	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152495.1	+1	provisional	e5+2	1.000	182	0%	138	60.9%	0	-	-	-	-	-
DNAH14	127602	genome.wustl.edu	37	1	225147866	225147866	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001373.1	+1	validated	p.E77*	0.008	373	0%	108	56.5%	3	33.3%	-	-	-	NULL
DNAH14	127602	genome.wustl.edu	37	1	225211557	225211557	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001373.1	+1	validated	p.N450H	0.085	190	0%	79	63.3%	0	-	benign(0.001)	deleterious(0.04)	neutral(0.349)	NULL
DNAH14	127602	genome.wustl.edu	37	1	225231461	225231461	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001373.1	+1	validated	p.T595N	0.000	278	0%	135	24.4%	0	-	possibly_damaging(0.607)	tolerated(0.08)	deleterious(0.510)	NULL
DNAH14	127602	genome.wustl.edu	37	1	225273484	225273484	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001373.1	+1	validated	p.P1189L	1.000	158	0%	119	29.4%	0	-	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_DHC_N2
DNAH14	127602	genome.wustl.edu	37	1	225380527	225380527	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001373.1	+1	validated	p.R1912*	0.996	303	0%	106	18.9%	0	-	-	-	-	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH14	127602	genome.wustl.edu	37	1	225428345	225428345	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001373.1	+1	validated	p.I2168S	0.025	176	0%	108	25.9%	0	-	benign(0.085)	tolerated(0.19)	neutral(0.056)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH14	127602	genome.wustl.edu	37	1	225534296	225534296	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001373.1	+1	validated	p.F3653V	1.000	201	0%	94	34%	0	-	probably_damaging(0.974)	deleterious(0.01)	deleterious(0.822)	NULL
DNAH14	127602	genome.wustl.edu	37	1	225586863	225586863	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000428003	+1	known	p.R184W	0.001	247	0%	197	30.5%	0	-	-	-	-	HMMPfam_Dynein_heavy
ENAH	55740	genome.wustl.edu	37	1	225705130	225705130	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000284563	-1	known	p.P474	0.993	48	0%	31	19.4%	13	46.1%	-	-	-	NULL
EPHX1	2052	genome.wustl.edu	37	1	226030147	226030147	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000120.3	+1	reviewed	p.R338*	0.838	123	0%	124	33.1%	325	3.3%	-	-	-	HMMPfam_Abhydrolase_1,superfamily_SSF53474
LOC100288204	100288204	genome.wustl.edu	37	1	226074426	226074426	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342171.1	+1	model	p.R41	0.062	11	0%	16	25%	143	32.1%	-	-	-	NULL
ACBD3	64746	genome.wustl.edu	37	1	226340267	226340267	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022735.3	-1	reviewed	p.D382Y	1.000	69	0%	60	31.7%	65	32.3%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	NULL
ACBD3	64746	genome.wustl.edu	37	1	226342430	226342430	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022735.3	-1	reviewed	p.G336	1.000	373	0%	244	55.3%	75	68%	-	-	-	NULL
ACBD3	64746	genome.wustl.edu	37	1	226346969	226346969	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022735.3	-1	reviewed	p.Q273H	1.000	128	0%	104	34.6%	52	21.1%	possibly_damaging(0.702)	deleterious(0)	deleterious(0.697)	NULL
PARP1	142	genome.wustl.edu	37	1	226564862	226564862	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001618.3	-1	reviewed	p.N630H	1.000	164	0%	140	35.7%	125	32.8%	benign(0.235)	tolerated(0.15)	neutral(0.265)	HMMPfam_WGR,HMMSmart_SM00773
PARP1	142	genome.wustl.edu	37	1	226564979	226564979	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001618.3	-1	reviewed	p.R591S	1.000	106	0%	86	31.4%	162	38.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_WGR,HMMSmart_SM00773
PARP1	142	genome.wustl.edu	37	1	226574028	226574028	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001618.3	-1	reviewed	p.A278V	0.997	105	0%	111	27%	172	29.6%	benign(0.389)	tolerated(0.14)	neutral(0.374)	NULL
CDC42BPA	8476	genome.wustl.edu	37	1	227218145	227218145	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003607.3	-1	reviewed	p.E1233K	1.000	302	0.3%	133	50.4%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CNH,HMMSmart_CNH
ENSG00000221080	0	genome.wustl.edu	37	1	227695181	227695181	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000408153	-1	novel	NULL	1.000	31	0%	21	61.9%	0	-	-	-	-	-
ZNF678	339500	genome.wustl.edu	37	1	227842805	227842805	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178549.3	+1	validated	p.R285I	0.992	93	0%	35	25.7%	4	25%	benign(0.342)	tolerated(0.29)	neutral(0.137)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
JMJD4	65094	genome.wustl.edu	37	1	227920302	227920302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023007.2	-1	validated	p.L395F	1.000	39	0%	52	26.9%	53	33.9%	possibly_damaging(0.935)	deleterious(0.01)	deleterious(0.786)	NULL
PRSS38	339501	genome.wustl.edu	37	1	228033774	228033774	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183062.2	+1	validated	p.S282	0.225	73	0%	77	36.4%	0	-	-	-	-	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
PRSS38	339501	genome.wustl.edu	37	1	228033885	228033885	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183062.2	+1	validated	p.M319I	0.000	36	0%	48	29.2%	0	-	benign(0.301)	tolerated(1)	neutral(0.093)	NULL
MRPL55	128308	genome.wustl.edu	37	1	228294562	228294562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181462.2	-1	reviewed	p.R132C	0.088	21	0%	30	33.3%	258	27.5%	possibly_damaging(0.807)	tolerated(0.08)	deleterious(0.604)	HMMPfam_Mitoc_L55
GUK1	2987	genome.wustl.edu	37	1	228335356	228335356	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000858.5	+1	validated	p.S144I	1.000	11	0%	20	40%	585	31.4%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Guanylate_kin,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
IBA57	200205	genome.wustl.edu	37	1	228362897	228362897	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010867.2	+1	validated	p.G252S	0.999	6	0.000	17	0.471	10	40%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	superfamily_SSF103025
OBSCN	84033	genome.wustl.edu	37	1	228433284	228433284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.G1218S	0.999	60	0%	75	34.7%	5	20%	probably_damaging(1)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228434398	228434398	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.A1309	0.016	45	0%	64	35.9%	2	0%	-	-	-	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228462045	228462045	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.P1861	0.000	8	0.000	14	0.357	6	16.6%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228464948	228464948	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.A2230T	0.440	25	0%	58	24.1%	7	42.8%	benign(0.012)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228466617	228466617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.A2363T	1.000	17	0%	20	30%	9	11.1%	probably_damaging(1)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228468015	228468015	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.D2600A	1.000	12	0%	29	17.2%	6	16.6%	possibly_damaging(0.812)	deleterious(0.04)	deleterious(0.654)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228473991	228473991	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.S3073P	0.996	7	0.000	10	0.400	6	16.6%	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228476352	228476352	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.L3368	0.475	34	0%	55	36.4%	12	41.6%	-	-	-	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228482619	228482619	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.R3845I	0.961	54	0%	42	28.6%	5	60%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228523935	228523935	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.T5501A	0.000	96	0%	136	35.3%	7	14.2%	benign(0.125)	tolerated(0.79)	neutral(0.011)	NULL
OBSCN	84033	genome.wustl.edu	37	1	228547370	228547370	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052843.2	+1	reviewed	p.R6259	0.192	7	0.000	20	0.350	33	30.3%	-	-	-	NULL
OBSCN	84033	genome.wustl.edu	37	1	228563447	228563447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098623.1	+1	reviewed	p.A7570T	0.000	24	0%	60	18.3%	7	14.2%	benign(0.355)	tolerated(0.07)	neutral(0.431)	HMMSmart_SM00060,superfamily_Fibronectin type III
OBSCN	84033	genome.wustl.edu	37	1	228565334	228565334	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441106	+1	known	p.G2425R	0.084	48	0%	54	25.9%	7	0%	-	-	-	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
TRIM17	51127	genome.wustl.edu	37	1	228602645	228602645	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024940.2	-1	reviewed	p.S43R	0.780	6	0.000	8	0.500	2	0%	possibly_damaging(0.921)	tolerated(0.39)	neutral(0.387)	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
HIST3H3	8290	genome.wustl.edu	37	1	228612870	228612870	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003493.2	-1	reviewed	p.R53C	1.000	10	0%	19	36.8%	1	0%	probably_damaging(1)	-	-	HMMSmart_SM00428,superfamily_Histone-fold
RNF187	149603	genome.wustl.edu	37	1	228680921	228680921	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010858.2	+1	validated	p.A108	0.000	18	0%	25	40%	283	26.5%	-	-	-	NULL
RAB4A	5867	genome.wustl.edu	37	1	229438700	229438700	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004578.2	+1	provisional	p.P211	0.050	32	0%	27	37%	85	43.5%	-	-	-	HMMSmart_SM00176
ABCB10	23456	genome.wustl.edu	37	1	229653988	229653988	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012089.2	-1	reviewed	p.L719F	1.000	411	0%	287	13.2%	8	37.5%	possibly_damaging(0.78)	tolerated(0.11)	deleterious(0.563)	superfamily_SSF52540
TAF5L	27097	genome.wustl.edu	37	1	229730571	229730571	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014409.3	-1	reviewed	p.R415W	1.000	23	0%	41	31.7%	16	43.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00320,superfamily_WD40 repeat-like
URB2	9816	genome.wustl.edu	37	1	229795002	229795002	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014777.2	+1	provisional	p.Y1511*	1.000	84	0%	57	42.1%	9	33.3%	-	-	-	HMMPfam_Urb2
GALNT2	2590	genome.wustl.edu	37	1	230381858	230381858	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004481.3	+1	reviewed	p.N260T	1.000	175	0.6%	142	29.6%	37	24.3%	benign(0)	tolerated(1)	-	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
GALNT2	2590	genome.wustl.edu	37	1	230386269	230386269	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004481.3	+1	reviewed	p.Y324	0.901	392	0%	342	33.3%	29	20.6%	-	-	-	superfamily_Nucleotide-diphospho-sugar transferases
COG2	22796	genome.wustl.edu	37	1	230820885	230820885	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007357.2	+1	reviewed	p.R428M	0.060	305	0.3%	228	30.3%	36	30.5%	possibly_damaging(0.717)	deleterious(0)	deleterious(0.704)	NULL
CAPN9	10753	genome.wustl.edu	37	1	230903323	230903323	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006615.2	+1	reviewed	p.S191	1.000	61	0%	85	40%	0	-	-	-	-	HMMPfam_Peptidase_C2,HMMSmart_SM00230,superfamily_Cysteine proteinases
TTC13	79573	genome.wustl.edu	37	1	231067050	231067050	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024525.4	-1	validated	p.L432I	0.998	135	0%	107	35.5%	13	38.4%	benign(0.111)	tolerated(0.15)	neutral(0.249)	NULL
ARV1	64801	genome.wustl.edu	37	1	231125922	231125922	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022786.1	+1	provisional	p.D121Y	1.000	292	0.3%	254	27.6%	18	16.6%	probably_damaging(0.99)	deleterious(0.03)	deleterious(0.806)	HMMPfam_Arv1
TRIM67	440730	genome.wustl.edu	37	1	231333127	231333127	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004342.3	+1	validated	p.S352F	1.000	347	0%	260	25.8%	0	-	benign(0.044)	deleterious(0)	neutral(0.447)	HMMSmart_SM00502
TRIM67	440730	genome.wustl.edu	37	1	231344927	231344927	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004342.3	+1	validated	p.D685G	1.000	35	0%	58	29.3%	0	-	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	HMMPfam_SPRY,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00449
GNPAT	8443	genome.wustl.edu	37	1	231386713	231386713	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014236.3	+1	reviewed	p.L29F	1.000	330	0%	300	13.7%	26	19.2%	benign(0.383)	deleterious(0.04)	deleterious(0.471)	NULL
GNPAT	8443	genome.wustl.edu	37	1	231408094	231408094	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014236.3	+1	reviewed	p.V520A	0.996	442	0%	305	14.1%	88	11.3%	possibly_damaging(0.795)	deleterious(0.02)	deleterious(0.681)	NULL
EXOC8	149371	genome.wustl.edu	37	1	231472608	231472608	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175876.3	-1	validated	p.A295V	0.977	100	0%	95	16.8%	9	22.2%	benign(0.001)	tolerated(0.31)	neutral(0.027)	NULL
SIPA1L2	57568	genome.wustl.edu	37	1	232564275	232564275	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020808.3	-1	validated	p.T1431I	0.000	86	0%	65	33.8%	42	19%	benign(0.001)	tolerated(0.36)	neutral(0.020)	NULL
SIPA1L2	57568	genome.wustl.edu	37	1	232596890	232596890	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020808.3	-1	validated	p.C946	0.637	22	0%	23	34.8%	22	27.2%	-	-	-	superfamily_PDZ domain-like
SIPA1L2	57568	genome.wustl.edu	37	1	232629350	232629350	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020808.3	-1	validated	p.R514W	1.000	359	0%	250	26.8%	26	19.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Rap/Ran-GAP (Pfam 02145)
SIPA1L2	57568	genome.wustl.edu	37	1	232649717	232649717	+	Missense_Mutation	SNP	C	C	T	rs186463568	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020808.3	-1	validated	p.V457I	0.998	138	0%	105	26.7%	27	25.9%	probably_damaging(0.993)	tolerated(0.12)	deleterious(0.711)	NULL
SIPA1L2	57568	genome.wustl.edu	37	1	232650416	232650416	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020808.3	-1	validated	p.A224T	0.311	106	0%	80	28.7%	12	33.3%	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
KIAA1383	54627	genome.wustl.edu	37	1	232943331	232943331	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019090.2	+1	validated	p.D854E	0.990	106	0%	82	29.3%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
PCNXL2	80003	genome.wustl.edu	37	1	233152685	233152685	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000429988	-1	known	p.C408R	0.992	105	0%	127	26.8%	8	12.5%	-	-	-	NULL
PCNXL2	80003	genome.wustl.edu	37	1	233394133	233394133	+	Missense_Mutation	SNP	G	G	A	rs181942130	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014801.3	-1	provisional	p.S492L	0.000	84	0%	53	35.8%	6	66.6%	benign(0.014)	tolerated(0.06)	neutral(0.323)	NULL
KIAA1804	84451	genome.wustl.edu	37	1	233514873	233514873	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032435.2	+1	validated	p.T707	0.021	60	0%	64	35.9%	5	0%	-	-	-	NULL
KIAA1804	84451	genome.wustl.edu	37	1	233518203	233518203	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032435.2	+1	validated	p.R953C	0.299	41	0%	43	20.9%	35	40%	probably_damaging(0.966)	deleterious(0)	deleterious(0.853)	NULL
LOC100288820	100288820	genome.wustl.edu	37	1	233972015	233972015	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342176.1	-1	model	p.S71	1.000	115	0%	51	13.7%	0	-	-	-	-	HMMPfam_LMWPc,HMMSmart_SM00226,superfamily_Phosphotyrosine protein phosphatases I
TARBP1	6894	genome.wustl.edu	37	1	234556530	234556530	+	Missense_Mutation	SNP	C	C	T	rs183482799	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005646.3	-1	reviewed	p.R1158H	0.842	368	0%	239	34.7%	8	62.5%	possibly_damaging(0.855)	deleterious(0)	deleterious(0.774)	superfamily_ARM-type_fold
IRF2BP2	359948	genome.wustl.edu	37	1	234743164	234743164	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182972.2	-1	reviewed	p.D495N	1.000	33	0%	37	37.8%	352	23.2%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
ARID4B	51742	genome.wustl.edu	37	1	235335969	235335969	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016374.5	-1	reviewed	p.R1259W	1.000	335	0%	205	32.2%	19	52.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ARID4B	51742	genome.wustl.edu	37	1	235377221	235377221	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016374.5	-1	reviewed	p.C568*	1.000	397	0%	310	33.9%	4	25%	-	-	-	HMMSmart_SM00333
ARID4B	51742	genome.wustl.edu	37	1	235383712	235383712	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016374.5	-1	reviewed	p.E438*	0.997	1006	0%	476	56.9%	1	0%	-	-	-	NULL
ARID4B	51742	genome.wustl.edu	37	1	235403670	235403670	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016374.5	-1	reviewed	p.Y181	0.038	337	0%	189	27%	10	50%	-	-	-	HMMPfam_RBB1NT
GGPS1	9453	genome.wustl.edu	37	1	235505756	235505756	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037277.1	+1	reviewed	p.A191D	1.000	278	0%	195	22.6%	28	21.4%	possibly_damaging(0.872)	tolerated(0.19)	neutral(0.389)	HMMPfam_polyprenyl_synt,PatternScan_POLYPRENYL_SYNTHET_2,superfamily_Terpenoid_synth
GNG4	2786	genome.wustl.edu	37	1	235715474	235715474	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098721.1	-1	validated	p.I55V	1.000	68	0%	74	33.8%	12	41.6%	benign(0.001)	tolerated(0.42)	neutral(0.014)	HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain
LYST	1130	genome.wustl.edu	37	1	235827794	235827794	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000081.2	-1	reviewed	p.I3722	1.000	165	0.6%	69	56.5%	6	50%	-	-	-	superfamily_WD40 repeat-like
LYST	1130	genome.wustl.edu	37	1	235840918	235840918	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000081.2	-1	reviewed	p.P3601L	1.000	271	0.7%	149	14.8%	7	0%	probably_damaging(1)	-	-	superfamily_WD40 repeat-like
LYST	1130	genome.wustl.edu	37	1	235918923	235918923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000081.2	-1	reviewed	p.A2362T	1.000	205	0%	78	33.3%	1	0%	probably_damaging(1)	-	-	NULL
LYST	1130	genome.wustl.edu	37	1	235945322	235945322	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000081.2	-1	reviewed	p.K1643T	1.000	290	0%	122	26.2%	4	0%	probably_damaging(0.996)	-	-	NULL
LYST	1130	genome.wustl.edu	37	1	235956838	235956838	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000081.2	-1	reviewed	p.L1361I	1.000	294	0%	142	27.5%	1	0%	probably_damaging(0.996)	tolerated(0.14)	deleterious(0.711)	NULL
LYST	1130	genome.wustl.edu	37	1	235969067	235969067	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000081.2	-1	reviewed	p.K1123	0.990	135	0%	61	27.9%	0	-	-	-	-	NULL
LYST	1130	genome.wustl.edu	37	1	235969712	235969712	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000081.2	-1	reviewed	p.C908	0.798	102	0%	75	22.7%	3	33.3%	-	-	-	NULL
LYST	1130	genome.wustl.edu	37	1	235973498	235973498	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000081.2	-1	reviewed	p.R207H	0.000	437	0%	261	24.1%	0	-	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
NID1	4811	genome.wustl.edu	37	1	236142340	236142340	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002508.2	-1	reviewed	p.T1193A	1.000	46	0%	64	23.4%	13	0%	benign(0.003)	tolerated(0.05)	neutral(0.345)	superfamily_YWTD domain
NID1	4811	genome.wustl.edu	37	1	236208824	236208824	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002508.2	-1	reviewed	p.L229V	0.000	199	0%	124	28.2%	4	25%	benign(0.059)	tolerated(0.19)	neutral(0.054)	HMMPfam_NIDO,HMMSmart_SM00539
ERO1LB	56605	genome.wustl.edu	37	1	236389600	236389600	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019891.3	-1	validated	p.T341P	0.642	173	0%	110	35.5%	35	31.4%	benign(0.008)	tolerated(0.26)	neutral(0.034)	HMMPfam_ERO1,superfamily_ERO1
ERO1LB	56605	genome.wustl.edu	37	1	236389764	236389764	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019891.3	-1	validated	p.R286H	1.000	269	0.4%	163	31.3%	42	19%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ERO1,superfamily_ERO1
ERO1LB	56605	genome.wustl.edu	37	1	236416757	236416757	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019891.3	-1	validated	p.S91P	1.000	211	0%	116	29.3%	23	43.4%	possibly_damaging(0.703)	tolerated(0.23)	neutral(0.294)	HMMPfam_ERO1,superfamily_ERO1
ACTN2	88	genome.wustl.edu	37	1	236912544	236912544	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001103.2	+1	reviewed	p.H546N	1.000	174	0%	118	35.6%	0	-	benign(0.009)	tolerated(0.42)	neutral(0.015)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
ACTN2	88	genome.wustl.edu	37	1	236920862	236920862	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001103.2	+1	reviewed	p.T744M	1.000	76	0%	75	29.3%	0	-	benign(0.297)	tolerated(0.08)	neutral(0.392)	superfamily_Spectrin repeat
RYR2	6262	genome.wustl.edu	37	1	237494288	237494288	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000360064	+1	known	p.V77A	1.000	92	0%	78	32.1%	0	-	-	-	-	HMMPfam_Ins145_P3_rec
RYR2	6262	genome.wustl.edu	37	1	237550612	237550612	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.V203G	1.000	53	0%	40	27.5%	0	-	probably_damaging(0.991)	-	-	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472
RYR2	6262	genome.wustl.edu	37	1	237711861	237711861	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.R1013W	0.998	54	0%	49	32.7%	0	-	probably_damaging(0.994)	-	-	HMMPfam_RyR
RYR2	6262	genome.wustl.edu	37	1	237729889	237729889	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.S1079	0.846	42	0%	28	17.9%	0	-	-	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237755073	237755073	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.T1399A	0.995	218	0%	147	34%	0	-	benign(0.006)	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237774264	237774264	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.S1629Y	1.000	55	0%	61	18%	0	-	benign(0.208)	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237780625	237780625	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.R1919W	1.000	105	1%	62	30.6%	0	-	probably_damaging(1)	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237791106	237791106	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	e41-1	1.000	36	0%	26	30.8%	0	-	-	-	-	-
RYR2	6262	genome.wustl.edu	37	1	237802448	237802448	+	Silent	SNP	C	C	T	rs182038403	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.A2354	0.040	152	0%	126	11.9%	0	-	-	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237823299	237823299	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.W2741*	1.000	520	0%	218	28.4%	0	-	-	-	-	HMMPfam_RyR
RYR2	6262	genome.wustl.edu	37	1	237838107	237838107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.R2931C	0.875	268	0%	168	28%	0	-	probably_damaging(0.993)	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237880534	237880534	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.R3454C	1.000	103	0%	94	37.2%	0	-	probably_damaging(1)	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237947752	237947752	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.A4247V	0.290	76	0%	60	21.7%	0	-	possibly_damaging(0.919)	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237949301	237949301	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035.2	+1	reviewed	p.E4431D	0.993	415	0%	199	62.8%	0	-	benign(0.126)	-	-	HMMPfam_RR_TM4-6
ZP4	57829	genome.wustl.edu	37	1	238048083	238048083	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021186.2	-1	reviewed	p.C459Y	0.922	58	0%	29	34.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Zona_pellucida,HMMSmart_SM00241
FMN2	56776	genome.wustl.edu	37	1	240370636	240370636	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020066.4	+1	validated	p.E842K	0.881	129	0%	122	21.3%	13	38.4%	unknown(0)	tolerated(0.24)	-	HMMSmart_FH2,HMMPfam_Drf_FH1
FMN2	56776	genome.wustl.edu	37	1	240492733	240492733	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020066.4	+1	validated	p.R1468C	1.000	381	0%	181	28.2%	15	26.6%	benign(0.016)	tolerated(0.22)	neutral(0.043)	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd
FH	2271	genome.wustl.edu	37	1	241676992	241676992	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000143.2	-1	reviewed	p.G97S	1.000	149	0%	113	23%	126	33.3%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Lyase_1,superfamily_L-aspartase-like
KMO	8564	genome.wustl.edu	37	1	241755337	241755337	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003679.3	+1	validated	p.R448Q	0.001	161	0%	79	36.7%	2	0%	benign(0.011)	tolerated(0.24)	neutral(0.038)	NULL
CHML	1122	genome.wustl.edu	37	1	241797646	241797646	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001821.3	-1	reviewed	p.S475P	1.000	127	0%	96	38.5%	14	35.7%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain,superfamily_FAD-linked reductases C-terminal domain
CHML	1122	genome.wustl.edu	37	1	241797851	241797851	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001821.3	-1	reviewed	p.V406	0.872	200	0%	124	16.1%	2	0%	-	-	-	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain
WDR64	128025	genome.wustl.edu	37	1	241901768	241901768	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144625.4	+1	validated	p.A143V	0.211	193	0%	79	15.2%	0	-	possibly_damaging(0.647)	tolerated(0.3)	neutral(0.256)	superfamily_WD40 repeat-like
MAP1LC3C	440738	genome.wustl.edu	37	1	242159664	242159664	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004343.2	-1	validated	p.T82M	0.035	69	0%	69	20.3%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_MAP1_LC3,superfamily_SSF54236
PLD5	200150	genome.wustl.edu	37	1	242383317	242383317	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152666.1	-1	provisional	p.A144	0.019	45	0%	28	42.9%	0	-	-	-	-	HMMPfam_PLDc,HMMSmart_PLDc,superfamily_SSF56024
CEP170	9859	genome.wustl.edu	37	1	243303405	243303405	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014812.2	-1	reviewed	p.V1355G	1.000	178	0%	164	12.8%	24	12.5%	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	NULL
CEP170	9859	genome.wustl.edu	37	1	243328495	243328495	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014812.2	-1	reviewed	p.Y923H	1.000	370	0%	186	33.3%	9	33.3%	probably_damaging(0.996)	tolerated(0.19)	deleterious(0.511)	NULL
CEP170	9859	genome.wustl.edu	37	1	243328537	243328537	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014812.2	-1	reviewed	p.R909C	0.995	324	0%	180	30.6%	8	50%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
CEP170	9859	genome.wustl.edu	37	1	243329212	243329212	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014812.2	-1	reviewed	p.T684A	0.101	718	0%	421	13.3%	17	11.7%	benign(0.004)	tolerated(0.65)	neutral(0.003)	NULL
SDCCAG8	10806	genome.wustl.edu	37	1	243581338	243581338	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006642.2	+1	validated	p.T605A	0.030	282	0.4%	127	33.1%	6	33.3%	benign(0.003)	tolerated(0.85)	neutral(0.001)	NULL
AKT3	10000	genome.wustl.edu	37	1	243675724	243675724	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005465.3	-1	reviewed	p.V419A	1.000	507	0%	354	28.2%	0	-	benign(0.003)	tolerated(0.72)	neutral(0.002)	HMMSmart_SM00133,superfamily_Protein kinase-like (PK-like)
AKT3	10000	genome.wustl.edu	37	1	243727136	243727136	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005465.3	-1	reviewed	p.M278I	1.000	375	0%	206	29.6%	1	0%	benign(0.204)	deleterious(0)	neutral(0.464)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
C1orf100	200159	genome.wustl.edu	37	1	244528037	244528037	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012970.1	+1	predicted	p.R12H	0.216	236	0%	215	33%	0	-	benign(0.008)	tolerated(0.23)	neutral(0.042)	NULL
HNRNPU	3192	genome.wustl.edu	37	1	245022044	245022044	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031844.2	-1	reviewed	p.I406S	1.000	565	0%	327	29.1%	162	0.6%	possibly_damaging(0.949)	deleterious(0)	deleterious(0.838)	HMMPfam_SPRY,HMMSmart_SM00449
KIF26B	55083	genome.wustl.edu	37	1	245766019	245766019	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018012.3	+1	provisional	p.K497N	0.953	125	0%	106	55.7%	11	63.6%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
SMYD3	64754	genome.wustl.edu	37	1	246078830	246078830	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022743.2	-1	validated	e7+2	0.998	85	0%	60	23.3%	1	100%	-	-	-	-
AHCTF1	25909	genome.wustl.edu	37	1	247025374	247025374	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015446.4	-1	validated	p.R1208*	1.000	288	0%	237	30.4%	8	12.5%	-	-	-	NULL
AHCTF1	25909	genome.wustl.edu	37	1	247048970	247048970	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015446.4	-1	validated	p.L829I	1.000	144	0%	86	22.1%	8	37.5%	probably_damaging(0.991)	tolerated(0.26)	deleterious(0.478)	NULL
ZNF670	93474	genome.wustl.edu	37	1	247201026	247201026	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033213.2	-1	validated	p.H299N	0.960	342	0%	243	32.1%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF124	7678	genome.wustl.edu	37	1	247320039	247320039	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003431.2	-1	provisional	p.C233W	1.000	305	0%	246	29.3%	5	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF496	84838	genome.wustl.edu	37	1	247492651	247492651	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032752.1	-1	provisional	p.T77N	1.000	11	0%	23	26.1%	20	45%	probably_damaging(0.953)	deleterious(0.01)	deleterious(0.802)	HMMPfam_SCAN,HMMSmart_SCAN
NLRP3	114548	genome.wustl.edu	37	1	247588377	247588377	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079821.2	+1	reviewed	p.T544	0.000	76	0%	84	32.1%	0	-	-	-	-	NULL
NLRP3	114548	genome.wustl.edu	37	1	247597434	247597434	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079821.2	+1	reviewed	p.C786Y	0.998	32	0%	36	33.3%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	superfamily_SSF52047
OR2B11	127623	genome.wustl.edu	37	1	247615086	247615086	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004492.1	-1	provisional	p.L67F	1.000	104	0%	118	26.3%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_7tm_1,superfamily_SSF81321
OR2W5	441932	genome.wustl.edu	37	1	247655129	247655129	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004698.2	+1	validated	p.A234T	0.001	34	0%	31	29%	0	-	-	-	-	HMMPfam_7tm_1
OR2C3	81472	genome.wustl.edu	37	1	247695078	247695078	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198074.4	-1	validated	p.V246M	0.189	38	0%	50	28%	0	-	possibly_damaging(0.814)	deleterious(0.04)	deleterious(0.656)	HMMPfam_7tm_1,superfamily_SSF81321
OR2C3	81472	genome.wustl.edu	37	1	247695556	247695556	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198074.4	-1	validated	p.L86	0.409	106	0%	114	31.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR6F1	343169	genome.wustl.edu	37	1	247875185	247875185	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005286.1	-1	provisional	p.T291	0.007	145	0%	95	34.7%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
OR6F1	343169	genome.wustl.edu	37	1	247875696	247875696	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005286.1	-1	provisional	p.D121G	1.000	42	0%	58	12.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
OR14K1	343170	genome.wustl.edu	37	1	247902553	247902553	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000283225	+1	known	p.V213I	0.000	543	0%	272	32%	0	-	benign(0.076)	tolerated(0.43)	neutral(0.019)	HMMPfam_7tm_1,superfamily_SSF81321
TRIM58	25893	genome.wustl.edu	37	1	248039417	248039417	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015431.3	+1	validated	p.C363R	0.576	109	0%	86	30.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SPRY,HMMSmart_SPRY
TRIM58	25893	genome.wustl.edu	37	1	248039559	248039559	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015431.3	+1	validated	p.C410Y	0.002	138	0%	112	9.8%	0	-	benign(0.413)	tolerated(0.07)	neutral(0.453)	HMMPfam_SPRY,HMMSmart_SPRY
OR2L8	391190	genome.wustl.edu	37	1	248112953	248112953	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001963.1	+1	provisional	p.R265Q	0.001	114	0%	79	94.9%	0	-	benign(0.253)	deleterious(0.04)	neutral(0.375)	HMMPfam_7tm_1,superfamily_SSF81321
OR2AK2	391191	genome.wustl.edu	37	1	248129081	248129081	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004491.1	+1	provisional	p.L150F	0.010	221	0%	164	14.6%	0	-	benign(0.109)	tolerated(0.13)	neutral(0.261)	HMMPfam_7tm_1,superfamily_SSF81321
OR2L5	81466	genome.wustl.edu	37	1	248185490	248185490	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000355281	+1	known	p.A81T	0.000	241	0%	121	38%	0	-	benign(0.002)	tolerated(0.08)	neutral(0.300)	HMMPfam_7tm_1,superfamily_SSF81321
OR2L13	284521	genome.wustl.edu	37	1	248263345	248263345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175911.2	+1	provisional	p.A223V	0.350	341	0%	229	31%	0	-	benign(0.036)	tolerated(0.22)	neutral(0.044)	HMMPfam_7tm_1,superfamily_SSF81321
OR2M2	391194	genome.wustl.edu	37	1	248343415	248343415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004688.1	+1	provisional	p.S43Y	0.000	428	0%	274	28.1%	0	-	possibly_damaging(0.818)	deleterious(0.04)	deleterious(0.658)	HMMPfam_7tm_1,superfamily_SSF81321
OR2M3	127062	genome.wustl.edu	37	1	248367069	248367069	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004689.1	+1	provisional	p.R234C	0.001	356	0%	164	61%	0	-	benign(0.003)	deleterious(0.02)	neutral(0.383)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR2M4	26245	genome.wustl.edu	37	1	248402644	248402644	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017504.1	+1	provisional	p.P138	0.000	166	0%	120	62.5%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR2T12	127064	genome.wustl.edu	37	1	248458522	248458522	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004692.1	-1	provisional	p.R120H	1.000	52	0%	74	48.6%	0	-	benign(0.426)	deleterious(0.01)	deleterious(0.544)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
OR2M7	391196	genome.wustl.edu	37	1	248487607	248487607	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004691.1	-1	provisional	p.G88	0.000	294	0%	174	29.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR14C36	127066	genome.wustl.edu	37	1	248512590	248512590	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001918.1	+1	provisional	p.I172V	0.000	133	0%	74	32.4%	0	-	benign(0.002)	tolerated(0.5)	neutral(0.010)	HMMPfam_7tm_1,superfamily_SSF81321
OR2T6	254879	genome.wustl.edu	37	1	248551705	248551705	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005471.1	+1	provisional	p.H266Y	0.952	192	0%	103	35%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR2T1	26696	genome.wustl.edu	37	1	248570192	248570192	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030904.1	+1	provisional	p.S299	0.047	136	0%	86	36%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
SH3BP5L	80851	genome.wustl.edu	37	1	249118950	249118950	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030645.1	-1	provisional	e1+2	1.000	139	0%	185	33%	4	100%	-	-	-	-
ZNF672	79894	genome.wustl.edu	37	1	249142234	249142234	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024836.1	+1	provisional	p.P254L	0.993	4	0.000	6	0.667	64	26.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_C2H2 and C2HC zinc fingers
TPO	7173	genome.wustl.edu	37	2	1499963	1499963	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000547.5	+1	reviewed	p.P737T	0.124	23	0%	22	50%	0	-	benign(0.002)	deleterious(0.01)	neutral(0.406)	NULL
TPO	7173	genome.wustl.edu	37	2	1500507	1500507	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000547.5	+1	reviewed	p.G786*	0.630	61	0%	50	38%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
LOC100288793	100288793	genome.wustl.edu	37	2	1653212	1653212	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342190.1	+1	model	p.M114I	0.026	10	0%	13	46.2%	5	0%	-	-	-	NULL
PXDN	7837	genome.wustl.edu	37	2	1657489	1657489	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012293.1	-1	validated	p.Q672R	1.000	64	0%	44	43.2%	5	0%	benign(0.127)	deleterious(0.03)	neutral(0.375)	NULL
MYT1L	23040	genome.wustl.edu	37	2	1795710	1795710	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015025.2	-1	validated	p.R1162C	1.000	470	0.2%	235	42.6%	0	-	probably_damaging(0.999)	tolerated(0.26)	deleterious(0.524)	NULL
MYT1L	23040	genome.wustl.edu	37	2	1893171	1893171	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015025.2	-1	validated	p.P786S	1.000	29	0%	39	53.8%	0	-	benign(0.005)	tolerated(0.17)	neutral(0.059)	HMMPfam_MYT1
ENSG00000252531	0	genome.wustl.edu	37	2	3628192	3628192	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000516722	+1	novel	NULL	0.054	89	0%	72	47.2%	4	25%	-	-	-	-
CMPK2	129607	genome.wustl.edu	37	2	6991642	6991642	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207315.2	-1	validated	p.R389W	0.999	95	0%	67	46.3%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Thymidylate_kin,superfamily_P-loop containing nucleoside triphosphate hydrolases
RSAD2	91543	genome.wustl.edu	37	2	7018219	7018219	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080657.4	+1	validated	p.T96	0.236	99	0%	44	40.9%	2	0%	-	-	-	HMMSmart_Elp3,HMMPfam_Radical_SAM,superfamily_SSF102114
RSAD2	91543	genome.wustl.edu	37	2	7036009	7036009	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080657.4	+1	validated	p.K341M	0.994	123	0%	57	15.8%	0	-	benign(0.018)	tolerated(0.05)	neutral(0.346)	NULL
KIDINS220	57498	genome.wustl.edu	37	2	8890323	8890323	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020738.2	-1	validated	p.F1111	0.008	28	0%	28	53.6%	32	50%	-	-	-	NULL
KIDINS220	57498	genome.wustl.edu	37	2	8910838	8910838	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020738.2	-1	validated	p.G991	0.914	256	0%	90	38.9%	19	52.6%	-	-	-	NULL
MBOAT2	129642	genome.wustl.edu	37	2	9028161	9028161	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138799.2	-1	validated	p.C146	0.206	96	0%	60	41.7%	15	33.3%	-	-	-	HMMPfam_MBOAT
CPSF3	51692	genome.wustl.edu	37	2	9571001	9571001	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016207.2	+1	provisional	p.V111	1.000	356	0%	160	11.9%	22	9%	-	-	-	HMMPfam_Lactamase_B,superfamily_Metallo-hydrolase/oxidoreductase
CPSF3	51692	genome.wustl.edu	37	2	9581974	9581974	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016207.2	+1	provisional	p.P322S	1.000	143	0%	87	41.4%	67	47.7%	probably_damaging(0.993)	tolerated(0.09)	deleterious(0.746)	NULL
ADAM17	6868	genome.wustl.edu	37	2	9650168	9650168	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003183.4	-1	reviewed	p.D428	0.998	202	0%	85	48.2%	21	47.6%	-	-	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAM17	6868	genome.wustl.edu	37	2	9658057	9658057	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003183.4	-1	reviewed	p.K388N	1.000	174	1.1%	59	47.5%	14	28.5%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
GRHL1	29841	genome.wustl.edu	37	2	10095163	10095163	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000324907	+1	known	p.A47V	1.000	57	0%	34	17.6%	11	9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
GRHL1	29841	genome.wustl.edu	37	2	10098922	10098922	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000324907	+1	known	p.R72K	0.996	142	0%	64	45.3%	10	30%	possibly_damaging(0.946)	tolerated(0.86)	neutral(0.391)	NULL
CYS1	192668	genome.wustl.edu	37	2	10199050	10199050	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037160.2	-1	validated	p.P136L	0.011	9	0.000	13	0.385	1	0%	probably_damaging(0.994)	-	-	NULL
HPCAL1	3241	genome.wustl.edu	37	2	10560040	10560040	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002149.2	+1	reviewed	p.A53T	1.000	22	0%	14	50%	70	41.4%	benign(0.133)	tolerated(0.31)	neutral(0.038)	superfamily_EF-hand
ATP6V1C2	245973	genome.wustl.edu	37	2	10911983	10911983	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039362.1	+1	reviewed	p.R163	1.000	60	0%	47	44.7%	1	0%	-	-	-	HMMPfam_V-ATPase_C
PDIA6	10130	genome.wustl.edu	37	2	10927442	10927442	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005742.2	-1	validated	p.G374	0.161	131	0%	82	15.9%	531	12%	-	-	-	superfamily_Thioredoxin-like
ROCK2	9475	genome.wustl.edu	37	2	11354966	11354966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004850.3	-1	reviewed	p.G646S	1.000	159	0.6%	91	36.3%	0	-	benign(0.009)	tolerated(0.57)	neutral(0.007)	NULL
GREB1	9687	genome.wustl.edu	37	2	11770212	11770212	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014668.3	+1	reviewed	p.R1530*	1.000	64	0%	38	47.4%	1	0%	-	-	-	NULL
LPIN1	23175	genome.wustl.edu	37	2	11911614	11911614	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145693.1	+1	reviewed	p.T135	0.000	71	0%	79	41.8%	7	71.4%	-	-	-	NULL
LPIN1	23175	genome.wustl.edu	37	2	11919713	11919713	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145693.1	+1	reviewed	p.T264I	0.002	162	0%	121	35.5%	3	33.3%	benign(0.043)	tolerated(0.19)	neutral(0.052)	NULL
LPIN1	23175	genome.wustl.edu	37	2	11931903	11931903	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000425416	+1	known	p.A34T	0.000	70	0%	39	43.6%	0	-	benign(0.29)	tolerated(0.25)	neutral(0.127)	NULL
LPIN1	23175	genome.wustl.edu	37	2	11960600	11960600	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145693.1	+1	reviewed	p.G825*	1.000	307	0%	123	23.6%	11	36.3%	-	-	-	HMMPfam_LNS2,HMMSmart_LNS2
TRIB2	28951	genome.wustl.edu	37	2	12880717	12880717	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021643.3	+1	reviewed	p.L277	1.000	50	0%	33	45.5%	3	0%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
DDX1	1653	genome.wustl.edu	37	2	15743376	15743376	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004939.1	+1	reviewed	p.T151I	1.000	134	0%	111	45%	47	38.2%	possibly_damaging(0.692)	deleterious(0.01)	deleterious(0.653)	HMMPfam_SPRY,HMMPfam_DEAD,HMMSmart_SM00487,HMMSmart_SM00449,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYCN	4613	genome.wustl.edu	37	2	16085786	16085786	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005378.4	+1	reviewed	p.K321R	0.998	36	0%	26	15.4%	21	19%	benign(0.122)	deleterious(0.04)	neutral(0.359)	HMMPfam_Myc_N
SMC6	79677	genome.wustl.edu	37	2	17877661	17877661	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142286.1	-1	validated	p.D809	1.000	861	0%	263	42.2%	11	72.7%	-	-	-	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
SMC6	79677	genome.wustl.edu	37	2	17919558	17919558	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142286.1	-1	validated	p.G92S	1.000	261	0%	78	34.6%	13	46.1%	possibly_damaging(0.928)	deleterious(0.04)	deleterious(0.724)	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
GEN1	348654	genome.wustl.edu	37	2	17962005	17962005	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130009.1	+1	validated	p.S509L	0.000	209	0%	78	46.2%	3	33.3%	benign(0)	tolerated(0.21)	neutral(0.044)	NULL
MSGN1	343930	genome.wustl.edu	37	2	17998000	17998000	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105569.1	+1	provisional	p.G72D	0.001	14	0%	13	53.8%	0	-	possibly_damaging(0.612)	tolerated(0.78)	neutral(0.213)	NULL
KCNS3	3790	genome.wustl.edu	37	2	18113251	18113251	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002252.3	+1	reviewed	p.L326F	1.000	100	0%	63	44.4%	1	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Ion_trans,superfamily_SSF81324
OSR1	130497	genome.wustl.edu	37	2	19552098	19552098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145260.2	-1	validated	p.A247T	1.000	182	0%	154	35.7%	1	0%	probably_damaging(0.987)	tolerated(0.17)	deleterious(0.495)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
OSR1	130497	genome.wustl.edu	37	2	19553070	19553070	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145260.2	-1	validated	p.R166H	1.000	71	0%	60	51.7%	1	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
WDR35	57539	genome.wustl.edu	37	2	20133189	20133189	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006657.1	-1	reviewed	p.A888	0.006	243	0%	104	41.3%	5	60%	-	-	-	NULL
MATN3	4148	genome.wustl.edu	37	2	20205647	20205647	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002381.4	-1	reviewed	p.E216D	1.000	14	0%	21	38.1%	1	100%	possibly_damaging(0.825)	tolerated(0.17)	neutral(0.371)	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
PUM2	23369	genome.wustl.edu	37	2	20511295	20511295	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015317.1	-1	provisional	p.G160S	1.000	376	0%	152	44.1%	7	57.1%	possibly_damaging(0.892)	tolerated(0.2)	neutral(0.400)	NULL
APOB	338	genome.wustl.edu	37	2	21225916	21225916	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000384.2	-1	reviewed	p.I4126	0.000	132	0%	59	35.6%	0	-	-	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21229372	21229372	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000384.2	-1	reviewed	p.S3456	0.543	177	0%	53	34%	0	-	-	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21231210	21231210	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000384.2	-1	reviewed	p.L2844M	0.000	212	0%	74	52.7%	0	-	possibly_damaging(0.905)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21234696	21234696	+	Missense_Mutation	SNP	T	T	C	rs140858817	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000384.2	-1	reviewed	p.M1682V	0.000	144	0%	61	45.9%	0	-	benign(0)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21238244	21238244	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000384.2	-1	reviewed	p.Y1169C	0.419	105	0%	54	46.3%	0	-	probably_damaging(0.999)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21247954	21247954	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000384.2	-1	reviewed	p.K763E	1.000	131	0%	58	53.4%	0	-	probably_damaging(0.999)	-	-	HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions
C2orf44	80304	genome.wustl.edu	37	2	24261758	24261758	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025203.2	-1	validated	p.D203Y	1.000	31	0%	23	26.1%	6	66.6%	probably_damaging(0.973)	deleterious(0.05)	deleterious(0.760)	NULL
TP53I3	9540	genome.wustl.edu	37	2	24302475	24302475	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004881.2	-1	reviewed	p.G219R	0.333	124	0.8%	114	43%	7	0%	probably_damaging(0.97)	deleterious(0.01)	deleterious(0.818)	HMMPfam_ADH_zinc_N,superfamily_NAD(P)-binding Rossmann-fold domains
C2orf84	653140	genome.wustl.edu	37	2	24362273	24362273	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000454150	+1	known	p.E132*	1.000	554	0%	228	38.2%	0	-	-	-	-	NULL
ITSN2	50618	genome.wustl.edu	37	2	24443926	24443926	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006277.2	-1	reviewed	p.D1196G	1.000	100	0%	69	39.1%	9	55.5%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	superfamily_DBL homology domain (DH-domain),superfamily_SH3-domain
ADCY3	109	genome.wustl.edu	37	2	25046101	25046101	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004036.3	-1	reviewed	p.E954*	1.000	64	0%	60	45%	17	11.7%	-	-	-	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
ADCY3	109	genome.wustl.edu	37	2	25057421	25057421	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004036.3	-1	reviewed	p.A634T	1.000	20	0%	18	50%	14	42.8%	benign(0.096)	tolerated(0.17)	neutral(0.066)	NULL
DNMT3A	1788	genome.wustl.edu	37	2	25470575	25470575	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022552.3	-1	reviewed	p.L300P	1.000	52	0%	52	42.3%	8	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_PWWP,HMMSmart_SM00293,superfamily_Tudor/PWWP/MBT
ASXL2	55252	genome.wustl.edu	37	2	25982440	25982440	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018263.4	-1	validated	p.R284*	0.937	201	0.5%	127	40.9%	6	33.3%	-	-	-	NULL
EPT1	85465	genome.wustl.edu	37	2	26597921	26597921	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000407686	+1	known	p.V196A	1.000	432	0%	232	41.4%	3	66.6%	benign(0.378)	deleterious(0.03)	deleterious(0.485)	HMMPfam_CDP-OH_P_transf
CCDC164	92749	genome.wustl.edu	37	2	26667219	26667219	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145038.2	+1	validated	p.A386	1.000	136	0%	81	48.1%	1	100%	-	-	-	NULL
OTOF	9381	genome.wustl.edu	37	2	26706431	26706431	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194248.2	-1	reviewed	p.R431C	0.999	45	0%	42	42.9%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
OTOF	9381	genome.wustl.edu	37	2	26741909	26741909	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194248.2	-1	reviewed	p.T99M	0.998	57	0%	50	34%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
C2orf18	54978	genome.wustl.edu	37	2	26997938	26997938	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017877.3	+1	validated	p.F59L	1.000	43	0%	40	45%	39	69.2%	benign(0.002)	tolerated(1)	-	superfamily_SSF103481
TMEM214	54867	genome.wustl.edu	37	2	27258519	27258519	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017727.4	+1	validated	p.A187V	0.724	68	1.5%	82	48.8%	68	35.2%	benign(0.036)	tolerated(0.29)	neutral(0.031)	NULL
TMEM214	54867	genome.wustl.edu	37	2	27260561	27260561	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017727.4	+1	validated	p.M381I	1.000	121	0%	92	37%	86	44.1%	possibly_damaging(0.496)	tolerated(0.06)	deleterious(0.488)	HMMPfam_DUF2359
AGBL5	60509	genome.wustl.edu	37	2	27277663	27277663	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021831.5	+1	validated	p.F239	0.996	85	0%	100	51%	26	38.4%	-	-	-	superfamily_Zn-dependent exopeptidases
EMILIN1	11117	genome.wustl.edu	37	2	27303043	27303043	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007046.3	+1	reviewed	p.T65	0.201	97	0%	107	51.4%	7	0%	-	-	-	HMMPfam_EMI
SLC5A6	8884	genome.wustl.edu	37	2	27423973	27423973	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021095.2	-1	validated	p.R553*	1.000	26	0%	32	25%	20	30%	-	-	-	NULL
CAD	790	genome.wustl.edu	37	2	27447966	27447966	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004341.3	+1	reviewed	p.G492V	0.992	75	0%	63	28.6%	6	33.3%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_CPSase_L_chain,superfamily_PreATP-grasp-like
CAD	790	genome.wustl.edu	37	2	27459283	27459283	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000458503	+1	known	p.A47V	0.994	43	0%	31	48.4%	14	78.5%	-	-	-	HMMPfam_MGS
CAD	790	genome.wustl.edu	37	2	27463934	27463934	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004341.3	+1	reviewed	p.G1883R	0.976	69	0%	56	25%	26	23%	benign(0.234)	tolerated(0.4)	neutral(0.040)	NULL
GTF3C2	2976	genome.wustl.edu	37	2	27549522	27549522	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000431028	-1	known	p.P77H	0.643	29	0%	34	44.1%	66	37.8%	-	-	-	NULL
GTF3C2	2976	genome.wustl.edu	37	2	27549629	27549629	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000454704	-1	known	p.P392L	1.000	59	0%	47	29.8%	85	10.5%	-	-	-	NULL
GTF3C2	2976	genome.wustl.edu	37	2	27564948	27564948	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035521.1	-1	validated	p.G241D	0.000	52	0%	42	52.4%	21	38%	benign(0)	tolerated(0.25)	neutral(0.037)	NULL
GTF3C2	2976	genome.wustl.edu	37	2	27565835	27565835	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035521.1	-1	validated	p.R143*	1.000	104	0%	84	15.5%	13	0%	-	-	-	NULL
GTF3C2	2976	genome.wustl.edu	37	2	27565940	27565940	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035521.1	-1	validated	p.R108*	1.000	133	0%	90	37.8%	17	29.4%	-	-	-	NULL
ZNF513	130557	genome.wustl.edu	37	2	27601107	27601107	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144631.4	-1	validated	p.L311	1.000	21	0%	27	70.4%	20	40%	-	-	-	NULL
NRBP1	29959	genome.wustl.edu	37	2	27663717	27663717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013392.2	+1	validated	p.Q413H	1.000	64	0%	50	54%	157	46.4%	benign(0.005)	tolerated(0.18)	neutral(0.056)	NULL
C2orf16	84226	genome.wustl.edu	37	2	27800908	27800908	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032266.3	+1	validated	p.R490K	0.085	103	0%	42	54.8%	0	-	benign(0.001)	tolerated(0.9)	-	NULL
C2orf16	84226	genome.wustl.edu	37	2	27802756	27802756	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032266.3	+1	validated	p.V1106A	0.174	67	0%	36	52.8%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	NULL
ZNF512	84450	genome.wustl.edu	37	2	27823625	27823625	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032434.2	+1	validated	p.Q175H	1.000	253	0%	133	48.1%	13	38.4%	possibly_damaging(0.931)	tolerated(0.08)	deleterious(0.677)	NULL
CCDC121	79635	genome.wustl.edu	37	2	27851539	27851539	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142683.2	-1	validated	p.G31E	0.000	34	0%	30	46.7%	0	-	probably_damaging(0.998)	-	-	NULL
SUPT7L	9913	genome.wustl.edu	37	2	27878392	27878392	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014860.1	-1	provisional	p.K274	1.000	104	0%	59	52.5%	28	39.2%	-	-	-	NULL
SLC4A1AP	22950	genome.wustl.edu	37	2	27892160	27892160	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018158.2	+1	validated	p.A417	0.996	135	0%	102	38.2%	14	50%	-	-	-	HMMPfam_dsrm,HMMSmart_DSRM
RBKS	64080	genome.wustl.edu	37	2	28050438	28050438	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022128.1	-1	reviewed	p.T264I	1.000	118	0%	48	43.8%	14	42.8%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	PatternScan_PFKB_KINASES_2,HMMPfam_PfkB,superfamily_SSF53613
RBKS	64080	genome.wustl.edu	37	2	28050542	28050542	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000458185	-1	known	p.P90S	0.999	88	0%	40	42.5%	15	40%	-	-	-	HMMPfam_PfkB,superfamily_Ribokinase-like
BRE	9577	genome.wustl.edu	37	2	28152701	28152701	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004899.3	+1	validated	p.C44Y	1.000	102	0%	53	49.1%	31	54.8%	possibly_damaging(0.918)	tolerated(0.06)	deleterious(0.691)	HMMPfam_BRE
PLB1	151056	genome.wustl.edu	37	2	28865911	28865911	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153021.4	+1	validated	p.R1454H	0.000	22	0%	27	22.2%	0	-	possibly_damaging(0.593)	tolerated(0.17)	neutral(0.264)	NULL
PPP1CB	5500	genome.wustl.edu	37	2	28999739	28999739	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002709.2	+1	reviewed	p.K25N	1.000	202	0.5%	110	45.5%	107	48.5%	possibly_damaging(0.742)	deleterious(0)	deleterious(0.717)	superfamily_Metallo-dependent phosphatases
PPP1CB	5500	genome.wustl.edu	37	2	29001725	29001725	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002709.2	+1	reviewed	p.G79C	1.000	481	0.2%	225	43.1%	89	39.3%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases
PPP1CB	5500	genome.wustl.edu	37	2	29011567	29011567	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002709.2	+1	reviewed	p.V212	0.908	578	0%	306	47.1%	135	42.9%	-	-	-	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases
SPDYA	245711	genome.wustl.edu	37	2	29041919	29041919	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142634.1	+1	validated	p.D81N	0.993	312	0%	117	41%	0	-	benign(0.108)	tolerated(0.2)	neutral(0.058)	NULL
WDR43	23160	genome.wustl.edu	37	2	29152559	29152559	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015131.1	+1	validated	p.D474N	1.000	289	0%	114	45.6%	17	47%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40_like
ALK	238	genome.wustl.edu	37	2	29462582	29462582	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004304.3	-1	reviewed	p.I773	1.000	24	0%	15	40%	0	-	-	-	-	NULL
LBH	81606	genome.wustl.edu	37	2	30480383	30480383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030915.3	+1	validated	p.E72K	1.000	30	0%	24	45.8%	24	33.3%	possibly_damaging(0.818)	deleterious(0.03)	deleterious(0.673)	NULL
GALNT14	79623	genome.wustl.edu	37	2	31147025	31147025	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024572.2	-1	validated	p.S447N	0.234	463	0%	301	39.2%	0	-	benign(0)	tolerated(0.13)	neutral(0.253)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
GALNT14	79623	genome.wustl.edu	37	2	31147045	31147045	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024572.2	-1	validated	p.E440D	0.569	516	0.2%	318	46.9%	1	100%	benign(0)	tolerated(0.52)	neutral(0.009)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
GALNT14	79623	genome.wustl.edu	37	2	31215834	31215834	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024572.2	-1	validated	p.D57N	1.000	43	0%	21	33.3%	1	100%	unknown(0)	tolerated(0.32)	-	NULL
CAPN14	440854	genome.wustl.edu	37	2	31399904	31399904	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145122.1	-1	validated	p.E654*	0.974	17	0%	12	58.3%	0	-	-	-	-	superfamily_EF-hand
CAPN14	440854	genome.wustl.edu	37	2	31412301	31412301	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145122.1	-1	validated	p.R444I	0.000	72	0%	57	50.9%	0	-	possibly_damaging(0.76)	tolerated(0.28)	neutral(0.312)	HMMPfam_Calpain_III,HMMSmart_SM00720,superfamily_Calpain large subunit middle domain (domain III)
CAPN14	440854	genome.wustl.edu	37	2	31423486	31423486	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145122.1	-1	validated	p.S186Y	0.010	61	0%	44	31.8%	0	-	benign(0.004)	deleterious(0)	neutral(0.445)	HMMPfam_Peptidase_C2,HMMSmart_SM00230,superfamily_Cysteine proteinases
EHD3	30845	genome.wustl.edu	37	2	31483516	31483516	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014600.2	+1	validated	p.R215*	0.997	46	0%	43	44.2%	2	0%	-	-	-	HMMPfam_Dynamin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
XDH	7498	genome.wustl.edu	37	2	31590879	31590879	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000379.3	-1	reviewed	p.I715	0.003	335	0%	158	50%	3	33.3%	-	-	-	HMMPfam_Ald_Xan_dh_C2,superfamily_Ald_xan_DH_mo_bd
NLRC4	58484	genome.wustl.edu	37	2	32475483	32475483	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000360906	-1	known	p.T484A	0.986	70	0%	55	40%	1	0%	possibly_damaging(0.892)	tolerated(0.09)	deleterious(0.648)	NULL
NLRC4	58484	genome.wustl.edu	37	2	32475610	32475610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000360906	-1	known	p.F441L	1.000	91	0%	44	47.7%	0	-	possibly_damaging(0.792)	deleterious(0)	deleterious(0.742)	NULL
BIRC6	57448	genome.wustl.edu	37	2	32620642	32620642	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016252.3	+1	reviewed	p.E339K	1.000	279	0%	146	18.5%	10	50%	possibly_damaging(0.882)	deleterious(0)	deleterious(0.789)	HMMPfam_BIR,HMMSmart_SM00238,superfamily_Inhibitor of apoptosis (IAP) repeat
BIRC6	57448	genome.wustl.edu	37	2	32725073	32725073	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016252.3	+1	reviewed	p.S2976	0.723	71	0%	39	43.6%	10	30%	-	-	-	NULL
BIRC6	57448	genome.wustl.edu	37	2	32768495	32768495	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016252.3	+1	reviewed	p.A4160V	1.000	172	0%	84	45.2%	27	48.1%	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
BIRC6	57448	genome.wustl.edu	37	2	32819113	32819113	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016252.3	+1	reviewed	p.R4496Q	1.000	92	0%	39	61.5%	24	45.8%	benign(0.417)	tolerated(0.58)	neutral(0.140)	NULL
LTBP1	4052	genome.wustl.edu	37	2	33411959	33411959	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206943.2	+1	reviewed	p.C413F	1.000	185	0%	76	17.1%	12	16.6%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
LTBP1	4052	genome.wustl.edu	37	2	33468748	33468748	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206943.2	+1	reviewed	p.L632	1.000	282	0%	136	46.3%	16	43.7%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
LTBP1	4052	genome.wustl.edu	37	2	33526656	33526656	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000415140	+1	known	p.F104S	1.000	147	0%	96	54.2%	35	37.1%	-	-	-	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
RASGRP3	25780	genome.wustl.edu	37	2	33783819	33783819	+	Missense_Mutation	SNP	G	G	A	rs75531739	byCluster;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139488.1	+1	validated	p.G596S	1.000	71	0%	63	39.7%	8	37.5%	probably_damaging(0.999)	tolerated(0.54)	deleterious(0.498)	NULL
FAM98A	25940	genome.wustl.edu	37	2	33810141	33810141	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015475.3	-1	validated	p.G420V	1.000	169	0%	129	45%	41	14.6%	unknown(0)	deleterious(0)	-	NULL
FAM98A	25940	genome.wustl.edu	37	2	33810289	33810289	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015475.3	-1	validated	p.R371*	1.000	182	0%	153	48.4%	34	8.8%	-	-	-	NULL
CRIM1	51232	genome.wustl.edu	37	2	36749262	36749262	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016441.1	+1	provisional	p.R745H	0.918	177	0%	73	42.5%	10	0%	benign(0)	tolerated(0.23)	neutral(0.042)	NULL
CRIM1	51232	genome.wustl.edu	37	2	36771569	36771569	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016441.1	+1	provisional	p.R892*	0.788	193	0.5%	79	51.9%	8	0%	-	-	-	NULL
FEZ2	9637	genome.wustl.edu	37	2	36805806	36805806	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441005	-1	known	p.E81*	1.000	263	0%	141	48.2%	11	27.2%	possibly_damaging(0.919)	tolerated(0.06)	deleterious(0.692)	HMMPfam_FEZ
VIT	5212	genome.wustl.edu	37	2	37014328	37014328	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053276.3	+1	validated	p.R323*	1.000	156	0%	73	58.9%	0	-	-	-	-	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
VIT	5212	genome.wustl.edu	37	2	37041471	37041471	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053276.3	+1	validated	p.I683M	1.000	68	0%	48	43.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_SSF53300
STRN	6801	genome.wustl.edu	37	2	37096755	37096755	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003162.2	-1	validated	p.A481S	1.000	173	0%	78	56.4%	10	40%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40
STRN	6801	genome.wustl.edu	37	2	37126772	37126772	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003162.2	-1	validated	p.V230A	1.000	211	0%	113	45.1%	7	71.4%	benign(0.005)	tolerated(0.06)	neutral(0.323)	NULL
HEATR5B	54497	genome.wustl.edu	37	2	37265159	37265159	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019024.1	-1	validated	p.A1019T	1.000	120	0%	68	36.8%	9	0%	benign(0.001)	tolerated(0.62)	neutral(0.004)	superfamily_ARM repeat
HEATR5B	54497	genome.wustl.edu	37	2	37268295	37268295	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019024.1	-1	validated	p.G946V	0.998	136	0%	79	48.1%	9	66.6%	benign(0.011)	tolerated(0.06)	neutral(0.323)	superfamily_ARM repeat
HEATR5B	54497	genome.wustl.edu	37	2	37268422	37268422	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019024.1	-1	validated	p.R904*	1.000	175	0%	78	52.6%	5	60%	-	-	-	superfamily_ARM repeat
CEBPZ	10153	genome.wustl.edu	37	2	37450367	37450367	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005760.2	-1	validated	p.V609	0.999	351	0%	171	48%	29	37.9%	-	-	-	HMMPfam_CBF,superfamily_ARM repeat
CEBPZ	10153	genome.wustl.edu	37	2	37455186	37455186	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005760.2	-1	validated	p.L384I	1.000	177	0%	86	50%	23	47.8%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	superfamily_ARM repeat
CEBPZ	10153	genome.wustl.edu	37	2	37458681	37458681	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005760.2	-1	validated	p.F10	0.671	13	0%	21	33.3%	6	50%	-	-	-	NULL
PRKD3	23683	genome.wustl.edu	37	2	37487527	37487527	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005813.3	-1	reviewed	p.N629H	1.000	279	0%	109	45.9%	11	45.4%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
QPCT	25797	genome.wustl.edu	37	2	37594509	37594509	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012413.3	+1	reviewed	p.P227	0.003	118	0%	46	60.9%	2	0%	-	-	-	HMMPfam_Peptidase_M28,superfamily_Zn-dependent exopeptidases
CDC42EP3	10602	genome.wustl.edu	37	2	37873616	37873616	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006449.3	-1	reviewed	p.R39C	1.000	244	0%	162	37.7%	18	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PBD,HMMSmart_SM00285
LOC344382	344382	genome.wustl.edu	37	2	38044772	38044772	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_293026.6	+1	model	p.A239T	1.000	281	0.4%	139	46%	0	-	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
CYP1B1-AS1	285154	genome.wustl.edu	37	2	38407739	38407739	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_027252.1	+1	predicted	NULL	0.001	111	0%	47	27.7%	0	-	-	-	-	-
CYP1B1-AS1	285154	genome.wustl.edu	37	2	38407882	38407882	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_027252.1	+1	predicted	NULL	0.003	348	0%	146	39.7%	0	-	-	-	-	-
DHX57	90957	genome.wustl.edu	37	2	39083596	39083596	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198963.1	-1	provisional	p.R532K	1.000	116	0%	63	38.1%	7	42.8%	probably_damaging(1)	tolerated(0.5)	deleterious(0.510)	NULL
DHX57	90957	genome.wustl.edu	37	2	39095404	39095404	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198963.1	-1	provisional	p.G48	0.975	101	0%	55	43.6%	3	33.3%	-	-	-	NULL
DHX57	90957	genome.wustl.edu	37	2	39095540	39095540	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198963.1	-1	provisional	p.S3Y	0.999	170	0%	78	30.8%	2	0%	unknown(0)	-	-	NULL
SOS1	6654	genome.wustl.edu	37	2	39222289	39222289	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005633.3	-1	reviewed	p.S1107	0.067	114	0%	41	43.9%	25	52%	-	-	-	NULL
THUMPD2	80745	genome.wustl.edu	37	2	39995616	39995616	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025264.4	-1	validated	p.A203V	1.000	471	0%	206	38.8%	11	54.5%	possibly_damaging(0.94)	tolerated(0.09)	deleterious(0.681)	HMMPfam_THUMP
THUMPD2	80745	genome.wustl.edu	37	2	39996895	39996895	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025264.4	-1	validated	p.V179	0.811	205	0%	142	47.2%	9	44.4%	-	-	-	HMMPfam_THUMP
SLC8A1	6546	genome.wustl.edu	37	2	40656679	40656679	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021097.2	-1	validated	p.F248L	1.000	54	0%	20	40%	1	100%	benign(0)	tolerated(0.74)	neutral(0.002)	HMMPfam_Na_Ca_ex
SLC8A1	6546	genome.wustl.edu	37	2	40656844	40656844	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021097.2	-1	validated	p.G193R	1.000	81	0%	35	17.1%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Na_Ca_ex
EML4	27436	genome.wustl.edu	37	2	42556101	42556101	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019063.3	+1	validated	p.V806A	0.994	149	0%	74	41.9%	31	54.8%	benign(0.003)	tolerated(0.25)	neutral(0.037)	superfamily_WD40 repeat-like
EML4	27436	genome.wustl.edu	37	2	42557090	42557090	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019063.3	+1	validated	p.T897A	0.026	153	0%	96	40.6%	18	55.5%	benign(0.001)	deleterious(0.02)	neutral(0.383)	NULL
HAAO	23498	genome.wustl.edu	37	2	43010935	43010935	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012205.2	-1	reviewed	p.R78W	0.991	40	0%	39	48.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_3-HAO,superfamily_RmlC-like cupins
THADA	63892	genome.wustl.edu	37	2	43458097	43458097	+	Missense_Mutation	SNP	G	G	A	rs114015985	byCluster;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083953.1	-1	validated	p.A1951V	0.000	68	0%	63	42.9%	33	48.4%	benign(0.102)	deleterious(0.01)	neutral(0.414)	NULL
THADA	63892	genome.wustl.edu	37	2	43799987	43799987	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083953.1	-1	validated	p.R625I	0.130	119	0%	60	36.7%	9	66.6%	benign(0.146)	tolerated(0.35)	neutral(0.033)	superfamily_ARM repeat
PLEKHH2	130271	genome.wustl.edu	37	2	43871859	43871859	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172069.3	+1	validated	p.R16Q	1.000	173	0%	76	48.7%	1	0%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
PLEKHH2	130271	genome.wustl.edu	37	2	43919680	43919680	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172069.3	+1	validated	p.A72T	1.000	155	0%	78	37.2%	1	100%	probably_damaging(0.98)	tolerated(0.52)	neutral(0.432)	NULL
DYNC2LI1	51626	genome.wustl.edu	37	2	44016823	44016823	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016008.2	+1	validated	p.D95N	1.000	210	0%	86	37.2%	19	31.5%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
DYNC2LI1	51626	genome.wustl.edu	37	2	44032311	44032311	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016008.2	+1	validated	p.D307Y	0.902	191	0.5%	91	40.7%	20	50%	benign(0.397)	deleterious(0.05)	deleterious(0.473)	NULL
ABCG8	64241	genome.wustl.edu	37	2	44102302	44102302	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022437.2	+1	reviewed	p.P502	0.001	37	0%	27	37%	0	-	-	-	-	HMMPfam_ABC2_membrane
ABCG8	64241	genome.wustl.edu	37	2	44104795	44104795	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022437.2	+1	reviewed	p.G618R	0.787	73	0%	60	50%	0	-	possibly_damaging(0.787)	tolerated(0.07)	deleterious(0.613)	NULL
LRPPRC	10128	genome.wustl.edu	37	2	44209551	44209551	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133259.3	-1	reviewed	p.L58	0.111	108	0%	54	33.3%	7	57.1%	-	-	-	NULL
PREPL	9581	genome.wustl.edu	37	2	44586653	44586653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006036.4	-1	reviewed	p.R68W	1.000	289	0%	131	44.3%	5	20%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Peptidase_S9_N
CAMKMT	79823	genome.wustl.edu	37	2	44981211	44981211	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024766.3	+1	validated	p.Y239C	1.000	379	0%	154	32.5%	10	40%	probably_damaging(0.999)	tolerated(0.11)	deleterious(0.762)	HMMPfam_Methyltransf_16,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
SRBD1	55133	genome.wustl.edu	37	2	45773945	45773945	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018079.4	-1	validated	p.A600	1.000	260	0%	155	35.5%	6	50%	-	-	-	HMMSmart_SM00732
SRBD1	55133	genome.wustl.edu	37	2	45807063	45807063	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018079.4	-1	validated	p.E341	0.992	155	0%	50	44%	4	75%	-	-	-	HMMPfam_Tex_N
PRKCE	5581	genome.wustl.edu	37	2	46070178	46070178	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005400.2	+1	reviewed	p.D130N	1.000	215	0%	124	48.4%	5	20%	possibly_damaging(0.818)	deleterious(0.01)	deleterious(0.715)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PRKCE	5581	genome.wustl.edu	37	2	46411911	46411911	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005400.2	+1	reviewed	p.F702C	1.000	132	0%	80	51.2%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00133,HMMPfam_Pkinase_C
EPAS1	2034	genome.wustl.edu	37	2	46583907	46583907	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001430.4	+1	reviewed	p.C138	0.981	242	0%	124	39.5%	30	26.6%	-	-	-	HMMSmart_PAS,superfamily_SSF55785
MCFD2	90411	genome.wustl.edu	37	2	47136209	47136209	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139279.4	-1	reviewed	p.S34	0.086	26	0%	18	44.4%	47	31.9%	-	-	-	NULL
C2orf61	285051	genome.wustl.edu	37	2	47317419	47317419	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000449846	-1	known	p.P85S	0.921	137	0%	99	42.4%	0	-	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	NULL
MSH6	2956	genome.wustl.edu	37	2	48027370	48027370	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000179.2	+1	reviewed	p.T750P	1.000	103	0%	34	14.7%	12	8.3%	benign(0.001)	deleterious(0.02)	neutral(0.383)	HMMPfam_MutS_III,superfamily_DNA repair protein MutS domain III
MSH6	2956	genome.wustl.edu	37	2	48028049	48028049	+	Missense_Mutation	SNP	G	G	A	rs63751113		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000179.2	+1	reviewed	p.R976H	1.000	65	0%	34	38.2%	21	71.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00533,superfamily_DNA repair protein MutS domain III,HMMPfam_MutS_IV
MSH6	2956	genome.wustl.edu	37	2	48028263	48028263	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000179.2	+1	reviewed	p.W1047*	1.000	87	0%	51	54.9%	36	16.6%	-	-	-	HMMSmart_SM00533,superfamily_DNA repair protein MutS domain III
MSH6	2956	genome.wustl.edu	37	2	48032786	48032786	+	Nonsense_Mutation	SNP	G	G	T	rs75095286		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000179.2	+1	reviewed	p.E1196*	1.000	65	0%	25	44%	38	18.4%	-	-	-	HMMPfam_MutS_V,HMMSmart_SM00534,superfamily_P-loop containing nucleoside triphosphate hydrolases
FBXO11	80204	genome.wustl.edu	37	2	48060162	48060162	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025133.3	-1	reviewed	p.S244A	1.000	299	0%	124	31.5%	24	50%	benign(0.012)	tolerated(0.25)	neutral(0.037)	superfamily_Pectin_lyas_like,superfamily_SSF81383
LHCGR	3973	genome.wustl.edu	37	2	48925868	48925868	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000233.3	-1	reviewed	p.T251K	0.088	241	0%	123	42.3%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	superfamily_L domain-like
LHCGR	3973	genome.wustl.edu	37	2	48950762	48950762	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000233.3	-1	reviewed	p.L153	1.000	278	0%	89	49.4%	0	-	-	-	-	superfamily_L domain-like
NRXN1	9378	genome.wustl.edu	37	2	50149134	50149134	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000412315	-1	known	p.R194*	1.000	444	0%	199	40.2%	0	-	benign(0)	tolerated(0.39)	neutral(0.016)	NULL
NRXN1	9378	genome.wustl.edu	37	2	50282157	50282157	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135659.1	-1	reviewed	p.A1288	1.000	128	0.8%	35	45.7%	0	-	-	-	-	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
NRXN1	9378	genome.wustl.edu	37	2	50779939	50779939	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135659.1	-1	reviewed	p.G555	1.000	311	0%	156	43.6%	0	-	-	-	-	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
NRXN1	9378	genome.wustl.edu	37	2	50780043	50780043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135659.1	-1	reviewed	p.P521S	1.000	287	0%	120	43.3%	0	-	possibly_damaging(0.72)	deleterious(0)	deleterious(0.706)	superfamily_ConA_like_lec_gl
CHAC2	494143	genome.wustl.edu	37	2	54001347	54001347	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008708.2	+1	provisional	p.D80	1.000	414	0%	197	46.7%	6	33.3%	-	-	-	HMMPfam_ChaC,superfamily_SSF110857
SPTBN1	6711	genome.wustl.edu	37	2	54856408	54856408	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003128.2	+1	reviewed	p.E713K	0.984	10	0%	14	28.6%	28	82.1%	benign(0.023)	tolerated(0.53)	neutral(0.009)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTBN1	6711	genome.wustl.edu	37	2	54858080	54858080	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003128.2	+1	reviewed	p.E966*	1.000	17	0%	10	60%	39	7.6%	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
EML6	400954	genome.wustl.edu	37	2	55056530	55056530	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039753.2	+1	validated	p.R255*	0.982	270	0%	116	42.2%	1	0%	-	-	-	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMPfam_WD40
EML6	400954	genome.wustl.edu	37	2	55122123	55122123	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039753.2	+1	validated	p.T938	0.663	184	0%	92	40.2%	1	100%	-	-	-	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase
EML6	400954	genome.wustl.edu	37	2	55191240	55191240	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039753.2	+1	validated	p.S1759N	1.000	152	0%	116	37.1%	2	0%	probably_damaging(0.99)	tolerated(0.37)	neutral(0.461)	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase
RTN4	57142	genome.wustl.edu	37	2	55214811	55214811	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020532.4	-1	reviewed	p.D1013Y	1.000	82	0%	53	18.9%	50	10%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Reticulon
RTN4	57142	genome.wustl.edu	37	2	55253638	55253638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020532.4	-1	reviewed	p.D533N	0.902	377	0%	118	55.1%	2	50%	benign(0.167)	tolerated(0.36)	neutral(0.035)	NULL
C2orf63	130162	genome.wustl.edu	37	2	55439918	55439918	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152385.2	-1	validated	p.S130	0.197	408	0%	179	39.7%	0	-	-	-	-	NULL
CCDC88A	55704	genome.wustl.edu	37	2	55555503	55555503	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135597.1	-1	validated	p.K974T	1.000	328	0%	104	42.3%	0	-	probably_damaging(1)	tolerated(0.29)	deleterious(0.529)	NULL
CCDC88A	55704	genome.wustl.edu	37	2	55573445	55573445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135597.1	-1	validated	p.R303C	1.000	276	0%	163	43.6%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CCDC104	112942	genome.wustl.edu	37	2	55747601	55747601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000339012	+1	known	p.A59V	0.001	180	0%	111	55%	0	-	benign(0)	tolerated(0.71)	neutral(0.002)	NULL
EFEMP1	2202	genome.wustl.edu	37	2	56098039	56098039	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039348.1	-1	reviewed	p.C379Y	1.000	219	0%	71	50.7%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CCDC85A	114800	genome.wustl.edu	37	2	56420033	56420033	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080433.1	+1	provisional	p.S233I	1.000	6	0.000	14	0.286	1	0%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
CCDC85A	114800	genome.wustl.edu	37	2	56602982	56602982	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080433.1	+1	provisional	p.G495E	1.000	298	0.3%	112	43.8%	0	-	probably_damaging(0.998)	tolerated(0.45)	deleterious(0.486)	NULL
CCDC85A	114800	genome.wustl.edu	37	2	56611400	56611400	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080433.1	+1	provisional	e6-1	1.000	118	0%	29	55.2%	0	-	-	-	-	-
PAPOLG	64895	genome.wustl.edu	37	2	60998754	60998754	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022894.2	+1	reviewed	p.R198H	1.000	120	0%	63	46%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PAP_central,superfamily_Nucleotidyltransferase
KIAA1841	84542	genome.wustl.edu	37	2	61319611	61319611	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129993.1	+1	validated	p.W367*	1.000	286	0%	88	52.3%	0	-	-	-	-	NULL
USP34	9736	genome.wustl.edu	37	2	61417789	61417789	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014709.3	-1	validated	p.A3198V	0.621	178	0%	92	45.7%	38	55.2%	possibly_damaging(0.83)	tolerated(0.22)	neutral(0.357)	NULL
USP34	9736	genome.wustl.edu	37	2	61433186	61433186	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014709.3	-1	validated	p.S3040	1.000	389	0%	138	18.1%	25	8%	-	-	-	NULL
USP34	9736	genome.wustl.edu	37	2	61528259	61528259	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014709.3	-1	validated	p.R1319W	1.000	118	0%	70	40%	16	25%	probably_damaging(0.999)	-	-	NULL
USP34	9736	genome.wustl.edu	37	2	61566564	61566564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014709.3	-1	validated	p.S889L	1.000	461	0.2%	152	42.8%	9	44.4%	possibly_damaging(0.937)	-	-	NULL
USP34	9736	genome.wustl.edu	37	2	61575161	61575161	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014709.3	-1	validated	p.N710T	0.997	140	0%	80	32.5%	9	66.6%	benign(0)	-	-	NULL
USP34	9736	genome.wustl.edu	37	2	61622010	61622010	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014709.3	-1	validated	p.A244V	1.000	265	0.4%	150	39.3%	5	0%	probably_damaging(0.98)	-	-	NULL
XPO1	7514	genome.wustl.edu	37	2	61717834	61717834	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003400.3	-1	reviewed	p.E655D	1.000	473	0%	188	38.3%	89	39.3%	benign(0.001)	tolerated(0.21)	neutral(0.044)	superfamily_ARM-type_fold
FAM161A	84140	genome.wustl.edu	37	2	62066790	62066790	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032180.2	-1	validated	p.L450R	0.045	292	0%	165	15.2%	2	50%	possibly_damaging(0.706)	tolerated(0.35)	neutral(0.275)	HMMPfam_UPF0564
FAM161A	84140	genome.wustl.edu	37	2	62067335	62067335	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418113	-1	known	p.R264H	0.976	754	0.1%	344	45.6%	1	100%	-	-	-	HMMPfam_UPF0564
FAM161A	84140	genome.wustl.edu	37	2	62067353	62067353	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418113	-1	known	p.S258L	0.000	779	0%	372	40.6%	2	0%	-	-	-	HMMPfam_UPF0564
CCT4	10575	genome.wustl.edu	37	2	62096601	62096601	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006430.2	-1	validated	p.R527W	1.000	253	0.4%	126	38.1%	276	46.3%	probably_damaging(0.997)	tolerated(0.06)	deleterious(0.788)	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase
B3GNT2	10678	genome.wustl.edu	37	2	62449643	62449643	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006577.5	+1	reviewed	p.C96	0.996	69	0%	55	40%	17	23.5%	-	-	-	NULL
TMEM17	200728	genome.wustl.edu	37	2	62729641	62729641	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198276.2	-1	validated	p.V83	0.424	281	0%	168	11.3%	1	0%	-	-	-	HMMPfam_Transmemb_17
EHBP1	23301	genome.wustl.edu	37	2	63053398	63053398	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015252.3	+1	reviewed	p.K163N	1.000	335	0%	127	43.3%	4	75%	probably_damaging(0.996)	tolerated(0.07)	deleterious(0.780)	NULL
EHBP1	23301	genome.wustl.edu	37	2	63092096	63092096	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015252.3	+1	reviewed	p.E365*	1.000	51	0%	24	45.8%	4	0%	-	-	-	NULL
WDPCP	51057	genome.wustl.edu	37	2	63631410	63631410	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015910.4	-1	validated	p.I403S	1.000	95	0%	32	31.2%	2	50%	benign(0.382)	tolerated(0.28)	neutral(0.153)	NULL
WDPCP	51057	genome.wustl.edu	37	2	63661008	63661008	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015910.4	-1	validated	p.N232K	0.032	120	0%	40	37.5%	2	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MDH1	4190	genome.wustl.edu	37	2	63824540	63824540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000421012	+1	known	p.S55L	0.981	78	0%	47	53.2%	162	45.6%	unknown(0)	deleterious(0.04)	-	NULL
VPS54	51542	genome.wustl.edu	37	2	64120624	64120624	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016516.2	-1	reviewed	p.A958	1.000	250	0.4%	93	20.4%	30	23.3%	-	-	-	NULL
SERTAD2	9792	genome.wustl.edu	37	2	64863595	64863595	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014755.2	-1	validated	p.E137	1.000	38	0%	30	50%	17	58.8%	-	-	-	NULL
SERTAD2	9792	genome.wustl.edu	37	2	64863862	64863862	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014755.2	-1	validated	p.L48	1.000	191	0%	109	45%	11	27.2%	-	-	-	HMMPfam_SERTA
CEP68	23177	genome.wustl.edu	37	2	65299443	65299443	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015147.2	+1	validated	p.G405C	0.092	21	0%	20	40%	23	43.4%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
CEP68	23177	genome.wustl.edu	37	2	65299736	65299736	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015147.2	+1	validated	p.I502M	0.000	54	0%	34	41.2%	14	42.8%	possibly_damaging(0.701)	tolerated(0.11)	deleterious(0.524)	NULL
RAB1A	5861	genome.wustl.edu	37	2	65316076	65316076	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004161.4	-1	reviewed	p.A139	0.997	282	0%	120	43.3%	243	45.2%	-	-	-	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMSmart_SM00177,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
ACTR2	10097	genome.wustl.edu	37	2	65473737	65473737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005386.2	+1	reviewed	p.R85Q	1.000	320	0%	138	35.5%	106	27.3%	probably_damaging(1)	tolerated(0.49)	deleterious(0.510)	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
ETAA1	54465	genome.wustl.edu	37	2	67630723	67630723	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019002.3	+1	validated	p.E303D	0.127	127	0%	50	22%	6	0%	benign(0.001)	tolerated(1)	-	NULL
ETAA1	54465	genome.wustl.edu	37	2	67631290	67631290	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019002.3	+1	validated	p.D492	0.004	84	0%	23	52.2%	3	33.3%	-	-	-	NULL
ETAA1	54465	genome.wustl.edu	37	2	67632308	67632308	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019002.3	+1	validated	p.L832I	0.002	233	0%	69	52.2%	4	25%	possibly_damaging(0.667)	tolerated(0.24)	neutral(0.273)	NULL
FBXO48	554251	genome.wustl.edu	37	2	68692206	68692206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024680.1	-1	provisional	p.E24D	0.002	432	0%	233	25.8%	0	-	benign(0)	tolerated(0.35)	neutral(0.021)	NULL
APLF	200558	genome.wustl.edu	37	2	68765185	68765185	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173545.2	+1	validated	p.S329L	0.000	123	0%	56	41.1%	0	-	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
APLF	200558	genome.wustl.edu	37	2	68765266	68765266	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173545.2	+1	validated	p.T356I	0.007	88	0%	44	38.6%	8	50%	benign(0.026)	tolerated(0.53)	neutral(0.009)	NULL
ARHGAP25	9938	genome.wustl.edu	37	2	69002506	69002506	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007231.2	+1	validated	p.A72V	0.687	48	0%	51	35.3%	1	0%	benign(0.43)	deleterious(0.04)	deleterious(0.489)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ARHGAP25	9938	genome.wustl.edu	37	2	69049843	69049843	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000497259	+1	known	p.P383H	0.660	49	0%	29	41.4%	4	0%	-	-	-	NULL
BMP10	27302	genome.wustl.edu	37	2	69092901	69092901	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014482.1	-1	reviewed	p.K379N	1.000	221	0%	101	36.6%	0	-	possibly_damaging(0.68)	tolerated(0.1)	deleterious(0.529)	HMMPfam_TGF_beta,HMMSmart_TGFB,superfamily_SSF57501
ANTXR1	84168	genome.wustl.edu	37	2	69330036	69330036	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032208.2	+1	reviewed	p.L256I	1.000	84	0%	47	46.8%	30	43.3%	probably_damaging(0.999)	tolerated(0.5)	deleterious(0.500)	HMMPfam_Anth_Ig
ENSG00000188971	0	genome.wustl.edu	37	2	69692701	69692701	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000339092	-1	known	p.A308	1.000	222	0%	115	46.1%	6	83.3%	-	-	-	NULL
AAK1	22848	genome.wustl.edu	37	2	69723128	69723128	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014911.3	-1	reviewed	p.P785H	1.000	65	0%	47	42.6%	2	50%	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	NULL
ANXA4	307	genome.wustl.edu	37	2	70031670	70031670	+	Missense_Mutation	SNP	G	G	A	rs34807725	byCluster;byFrequency;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001153.3	+1	reviewed	p.D35N	0.986	19	0%	21	38.1%	73	53.4%	benign(0.025)	tolerated(0.15)	neutral(0.242)	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_ANX
ANXA4	307	genome.wustl.edu	37	2	70035105	70035105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001153.3	+1	reviewed	p.R125H	0.192	25	4%	19	57.9%	71	46.4%	benign(0.001)	tolerated(0.1)	neutral(0.286)	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_ANX
SNRNP27	11017	genome.wustl.edu	37	2	70122274	70122274	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006857.1	+1	provisional	p.R28Q	1.000	20	0%	31	38.7%	40	42.5%	unknown(0)	tolerated(0.28)	-	HMMPfam_DUF1777
MXD1	4084	genome.wustl.edu	37	2	70165236	70165236	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002357.2	+1	reviewed	p.I162	0.713	72	0%	43	51.2%	11	54.5%	-	-	-	NULL
C2orf42	54980	genome.wustl.edu	37	2	70392705	70392705	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017880.1	-1	predicted	p.I403L	1.000	232	0%	112	36.6%	4	75%	benign(0.006)	tolerated(0.29)	neutral(0.029)	NULL
PCYOX1	51449	genome.wustl.edu	37	2	70486605	70486605	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016297.3	+1	validated	p.A76T	1.000	204	0%	140	46.4%	8	37.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_FAD/NAD(P)-binding domain
ADD2	119	genome.wustl.edu	37	2	70903901	70903901	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017482.3	-1	reviewed	p.G540	0.441	18	0%	21	47.6%	0	-	-	-	-	NULL
ADD2	119	genome.wustl.edu	37	2	70922899	70922899	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001617.3	-1	reviewed	p.I170T	0.998	48	0%	18	44.4%	0	-	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_Aldolase_II,superfamily_AraD-like aldolase/epimerase
ATP6V1B1	525	genome.wustl.edu	37	2	71170791	71170791	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001692.3	+1	reviewed	p.Y41C	1.000	18	0%	27	55.6%	4	50%	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	NULL
ANKRD53	79998	genome.wustl.edu	37	2	71212348	71212348	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001115116.1	+1	validated	p.D504G	0.994	16	0.000	7	0.571	1	100%	possibly_damaging(0.786)	deleterious(0)	deleterious(0.739)	NULL
PAIP2B	400961	genome.wustl.edu	37	2	71429712	71429712	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020459.1	-1	validated	p.G3E	1.000	300	0%	179	44.1%	24	54.1%	probably_damaging(0.996)	tolerated(0.18)	deleterious(0.518)	NULL
ZNF638	27332	genome.wustl.edu	37	2	71576137	71576137	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014972.1	+1	reviewed	p.R18Q	1.000	48	0%	28	46.4%	12	58.3%	benign(0.142)	-	-	NULL
ZNF638	27332	genome.wustl.edu	37	2	71650038	71650038	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014972.1	+1	reviewed	p.T1132A	0.002	138	0%	65	41.5%	14	78.5%	benign(0.117)	tolerated(0.08)	neutral(0.309)	NULL
ZNF638	27332	genome.wustl.edu	37	2	71653995	71653995	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014972.1	+1	reviewed	p.L1666	0.996	77	0%	67	32.8%	27	48.1%	-	-	-	NULL
ZNF638	27332	genome.wustl.edu	37	2	71653998	71653998	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014972.1	+1	reviewed	p.S1667P	1.000	79	0%	68	57.4%	25	44%	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	NULL
ZNF638	27332	genome.wustl.edu	37	2	71655769	71655769	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014972.1	+1	reviewed	p.Q1880*	0.821	177	0%	82	47.6%	28	21.4%	-	-	-	NULL
DYSF	8291	genome.wustl.edu	37	2	71744141	71744141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130987.1	+1	reviewed	p.R325K	1.000	195	0%	119	42.9%	1	100%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
DYSF	8291	genome.wustl.edu	37	2	71762178	71762178	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130987.1	+1	reviewed	p.A470T	1.000	53	0%	74	44.6%	2	0%	probably_damaging(0.986)	tolerated(0.1)	deleterious(0.721)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
SFXN5	94097	genome.wustl.edu	37	2	73268002	73268002	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144579.2	-1	validated	p.P77L	0.925	33	0%	33	39.4%	2	50%	benign(0.284)	tolerated(0.06)	neutral(0.409)	HMMPfam_Mtc
NOTO	344022	genome.wustl.edu	37	2	73435661	73435661	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134462.1	+1	provisional	p.E172D	1.000	147	0%	99	51.5%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
CCT7	10574	genome.wustl.edu	37	2	73475003	73475003	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006429.3	+1	reviewed	p.L244	0.670	146	0%	72	38.9%	260	47.3%	-	-	-	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like
ALMS1	7840	genome.wustl.edu	37	2	73676390	73676390	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015120.4	+1	reviewed	p.E911	0.004	54	0%	27	44.4%	5	60%	-	-	-	NULL
ALMS1	7840	genome.wustl.edu	37	2	73677946	73677946	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015120.4	+1	reviewed	p.H1430R	0.000	99	0%	39	30.8%	5	80%	benign(0.235)	tolerated(0.92)	neutral(0.024)	NULL
ALMS1	7840	genome.wustl.edu	37	2	73680358	73680358	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015120.4	+1	reviewed	p.K2234T	0.596	92	0%	35	48.6%	3	33.3%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
ALMS1	7840	genome.wustl.edu	37	2	73800074	73800074	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015120.4	+1	reviewed	p.G3689	0.020	92	0%	23	56.5%	3	0%	-	-	-	NULL
C2orf78	388960	genome.wustl.edu	37	2	74042888	74042888	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080474.1	+1	predicted	p.A513D	0.000	124	0%	119	45.4%	0	-	probably_damaging(0.974)	tolerated(0.17)	deleterious(0.475)	NULL
TET3	200424	genome.wustl.edu	37	2	74320740	74320740	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144993.1	+1	provisional	p.F937V	1.000	16	0%	21	23.8%	8	12.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
SLC4A5	57835	genome.wustl.edu	37	2	74452100	74452100	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021196.3	-1	reviewed	p.R1054Q	1.000	184	0.5%	145	44.1%	0	-	possibly_damaging(0.881)	tolerated(0.13)	deleterious(0.596)	NULL
SLC4A5	57835	genome.wustl.edu	37	2	74474251	74474251	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021196.3	-1	reviewed	p.I657	0.137	134	0%	98	45.9%	0	-	-	-	-	HMMPfam_HCO3_cotransp
SLC4A5	57835	genome.wustl.edu	37	2	74479458	74479458	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021196.3	-1	reviewed	p.G442	0.544	22	0%	24	50%	0	-	-	-	-	NULL
DCTN1	1639	genome.wustl.edu	37	2	74590476	74590476	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004082.3	-1	reviewed	p.I1097S	1.000	6	0.000	11	0.455	150	46%	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	NULL
DCTN1	1639	genome.wustl.edu	37	2	74590744	74590744	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004082.3	-1	reviewed	p.R1070*	1.000	74	0%	67	43.3%	0	-	-	-	-	NULL
DCTN1	1639	genome.wustl.edu	37	2	74596614	74596614	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004082.3	-1	reviewed	p.A466V	0.998	44	0%	49	38.8%	106	43.3%	probably_damaging(0.956)	deleterious(0.01)	deleterious(0.805)	NULL
WDR54	84058	genome.wustl.edu	37	2	74652205	74652205	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032118.2	+1	provisional	p.V213	0.437	61	0%	47	36.2%	115	40%	-	-	-	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase
PCGF1	84759	genome.wustl.edu	37	2	74732873	74732873	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032673.2	-1	validated	p.S185	0.241	76	0%	51	39.2%	46	34.7%	-	-	-	NULL
DQX1	165545	genome.wustl.edu	37	2	74746272	74746272	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133637.2	-1	validated	p.R631Q	0.114	85	0%	61	47.5%	2	0%	probably_damaging(0.986)	tolerated(0.62)	neutral(0.439)	HMMPfam_DUF1605
DQX1	165545	genome.wustl.edu	37	2	74750060	74750060	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133637.2	-1	validated	p.N409S	1.000	98	0%	58	12.1%	0	-	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	superfamily_P-loop containing nucleoside triphosphate hydrolases
AUP1	550	genome.wustl.edu	37	2	74754170	74754170	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181575.3	-1	reviewed	p.P365L	0.994	37	2.7%	39	43.6%	355	45%	benign(0.002)	tolerated(0.45)	neutral(0.012)	NULL
HTRA2	27429	genome.wustl.edu	37	2	74759015	74759015	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013247.4	+1	reviewed	p.R360C	1.000	63	0%	43	44.2%	50	46%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_PDZ domain-like
SEMA4F	10505	genome.wustl.edu	37	2	74902959	74902959	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004263.3	+1	provisional	p.C522	1.000	43	0%	33	18.2%	14	21.4%	-	-	-	HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat
REG3G	130120	genome.wustl.edu	37	2	79253241	79253241	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008387.1	+1	validated	p.P8S	0.000	125	0%	74	54.1%	0	-	benign(0.008)	tolerated(0.69)	neutral(0.002)	NULL
SUCLG1	8802	genome.wustl.edu	37	2	84676834	84676834	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003849.3	-1	reviewed	p.R47Q	1.000	73	0%	25	40%	37	18.9%	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	superfamily_NAD(P)-bd
DNAH6	1768	genome.wustl.edu	37	2	84752746	84752746	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001370.1	+1	validated	p.R95*	0.992	193	0%	40	12.5%	1	0%	-	-	-	NULL
C2orf89	129293	genome.wustl.edu	37	2	85059231	85059231	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080824.1	-1	predicted	p.R295W	0.222	58	0%	47	40.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C2orf89	129293	genome.wustl.edu	37	2	85097862	85097862	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080824.1	-1	predicted	p.P52	0.025	19	0%	11	36.4%	0	-	-	-	-	NULL
KCMF1	56888	genome.wustl.edu	37	2	85273245	85273245	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020122.4	+1	validated	p.R149*	1.000	303	0%	148	45.3%	49	10.2%	-	-	-	NULL
GGCX	2677	genome.wustl.edu	37	2	85777681	85777681	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000821.4	-1	reviewed	p.R694H	1.000	68	0%	37	35.1%	16	43.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RNF181	51255	genome.wustl.edu	37	2	85824199	85824199	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000456023	+1	known	p.K96N	0.021	169	0.6%	160	42.5%	6	33.3%	unknown(0)	-	-	NULL
USP39	10713	genome.wustl.edu	37	2	85863249	85863249	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006590.2	+1	validated	p.K341N	1.000	189	0%	89	10.1%	46	23.9%	benign(0.004)	tolerated(0.94)	-	HMMPfam_UCH,superfamily_Cysteine proteinases
ST3GAL5	8869	genome.wustl.edu	37	2	86067286	86067286	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003896.3	-1	reviewed	p.G413D	1.000	175	0%	95	43.2%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_transf_29
POLR1A	25885	genome.wustl.edu	37	2	86258456	86258456	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015425.3	-1	validated	p.C1525	0.962	20	0%	17	23.5%	15	46.6%	-	-	-	HMMPfam_RNA_pol_Rpb1_5,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
KDM3A	55818	genome.wustl.edu	37	2	86705034	86705034	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018433.5	+1	reviewed	p.V658	0.994	161	0%	88	40.9%	64	51.5%	-	-	-	NULL
PLGLB1	5343	genome.wustl.edu	37	2	87243504	87243504	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000409795	-1	known	p.N87S	0.956	694	0%	248	8.9%	5	0%	benign(0.002)	-	-	NULL
SMYD1	150572	genome.wustl.edu	37	2	88383920	88383920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198274.2	+1	provisional	p.D75N	1.000	83	1.2%	47	46.8%	0	-	benign(0.153)	deleterious(0.04)	neutral(0.362)	HMMSmart_SET,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,superfamily_SSF82199
THNSL2	55258	genome.wustl.edu	37	2	88478314	88478314	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018271.3	+1	validated	p.S195I	0.998	65	0%	39	53.8%	13	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PALP,superfamily_Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPIA	22934	genome.wustl.edu	37	2	89035244	89035244	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144563.2	+1	reviewed	p.A196T	1.000	178	0%	113	38.9%	43	44.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Rib_5-P_isom_A,superfamily_SSF100950
RPIA	22934	genome.wustl.edu	37	2	89037501	89037501	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144563.2	+1	reviewed	p.V249A	1.000	224	0%	105	41%	51	50.9%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Rib_5-P_isom_A,superfamily_SSF75445
ANKRD36BP2	645784	genome.wustl.edu	37	2	89086169	89086169	+	RNA	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_015424.1	+1	predicted	NULL	0.001	743	0%	293	39.2%	0	-	-	-	-	-
ANKRD36BP2	645784	genome.wustl.edu	37	2	89104330	89104330	+	RNA	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_015424.1	+1	predicted	NULL	0.001	310	0%	120	39.2%	0	-	-	-	-	-
IGKV5-2	28907	genome.wustl.edu	37	2	89197121	89197121	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390244	+1	known	p.Y56H	1.000	144	0%	34	44.1%	0	-	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGKV1-27	28935	genome.wustl.edu	37	2	89512918	89512918	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000498435	-1	known	p.N114S	0.000	153	0%	72	34.7%	8	0%	benign(0)	tolerated(0.42)	neutral(0.014)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
IGKV1-27	28935	genome.wustl.edu	37	2	89513049	89513049	+	Silent	SNP	G	G	T	rs180686877	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000498435	-1	known	p.I70	0.675	211	0%	91	34.1%	71	0%	-	-	-	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
IGKV2D-30	28881	genome.wustl.edu	37	2	89976488	89976488	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000474213	+1	known	p.P120L	0.137	77	0%	41	41.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Immunoglobulin
IGKV2D-26	28884	genome.wustl.edu	37	2	90025295	90025295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390268	+1	known	p.S48I	0.021	74	0%	34	26.5%	0	-	possibly_damaging(0.876)	deleterious(0.01)	deleterious(0.747)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
IGKV1D-17	28900	genome.wustl.edu	37	2	90121938	90121938	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000483379	+1	known	p.S52	0.001	205	0%	100	29%	1	0%	-	-	-	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
IGKV1D-42	28892	genome.wustl.edu	37	2	90229483	90229483	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390278	+1	known	p.K101	0.998	89	0%	56	42.9%	0	-	-	-	-	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGKV1D-43	28891	genome.wustl.edu	37	2	90249183	90249183	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000468879	+1	known	p.A47S	0.134	129	0%	81	38.3%	0	-	benign(0.047)	tolerated(0.38)	neutral(0.021)	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
LOC442028	442028	genome.wustl.edu	37	2	95614051	95614051	+	RNA	SNP	C	C	T	rs148466674	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_017781.2	-1	model	NULL	0.026	262	0%	133	43.6%	0	-	-	-	-	-
MRPS5	64969	genome.wustl.edu	37	2	95766240	95766240	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031902.3	-1	reviewed	p.K304E	1.000	964	0%	430	42.3%	39	43.5%	benign(0.062)	tolerated(0.24)	neutral(0.041)	HMMPfam_Ribosomal_S5_C,superfamily_Ribosomal protein S5 domain 2-like
MRPS5	64969	genome.wustl.edu	37	2	95766260	95766260	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031902.3	-1	reviewed	p.R297I	0.271	886	0.1%	399	40.9%	37	45.9%	benign(0.049)	deleterious(0.01)	neutral(0.409)	HMMPfam_Ribosomal_S5_C,superfamily_Ribosomal protein S5 domain 2-like
MRPS5	64969	genome.wustl.edu	37	2	95775772	95775772	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031902.3	-1	reviewed	p.L98M	1.000	184	0%	90	43.3%	42	42.8%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ZNF514	84874	genome.wustl.edu	37	2	95815106	95815106	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032788.1	-1	provisional	p.N375I	0.787	377	0%	155	37.4%	7	28.5%	probably_damaging(0.992)	tolerated(0.19)	deleterious(0.497)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF514	84874	genome.wustl.edu	37	2	95818954	95818954	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032788.1	-1	provisional	p.W15*	1.000	53	0%	37	40.5%	6	33.3%	-	-	-	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
PROM2	150696	genome.wustl.edu	37	2	95951391	95951391	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144707.2	+1	reviewed	p.Q627R	1.000	14	0%	23	39.1%	20	55%	benign(0.101)	tolerated(0.17)	neutral(0.067)	HMMPfam_Prominin
LOC400986	400986	genome.wustl.edu	37	2	96521802	96521802	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001717763.2	-1	model	p.D1055Y	0.566	368	0%	86	34.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LOC400986	400986	genome.wustl.edu	37	2	96617110	96617110	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001717763.2	-1	model	p.R102Q	0.000	1054	0.2%	289	30.4%	0	-	possibly_damaging(0.666)	deleterious(0)	deleterious(0.680)	NULL
GPAT2	150763	genome.wustl.edu	37	2	96687925	96687925	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000335448	-1	known	p.A847S	0.999	117	0%	112	52.7%	1	0%	-	-	-	NULL
ADRA2B	151	genome.wustl.edu	37	2	96781355	96781355	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000409345	-1	known	p.I178	0.483	18	0%	20	45%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
STARD7	56910	genome.wustl.edu	37	2	96859010	96859010	+	Silent	SNP	G	G	A	rs191259608	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020151.3	-1	validated	p.S210	0.994	183	0%	72	48.6%	90	41.1%	-	-	-	HMMPfam_START,HMMSmart_START,superfamily_SSF55961
SNRNP200	23020	genome.wustl.edu	37	2	96944095	96944095	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014014.3	-1	reviewed	p.E1830D	1.000	101	0%	101	43.6%	105	4.7%	probably_damaging(0.997)	tolerated(0.09)	deleterious(0.762)	HMMPfam_Sec63,HMMSmart_SM00611
SNRNP200	23020	genome.wustl.edu	37	2	96949404	96949404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014014.3	-1	reviewed	p.K1544N	1.000	83	0%	89	33.7%	104	6.7%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	superfamily_P-loop containing nucleoside triphosphate hydrolases
SNRNP200	23020	genome.wustl.edu	37	2	96955619	96955619	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014014.3	-1	reviewed	p.R953Q	1.000	69	0%	60	51.7%	52	84.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SNRNP200	23020	genome.wustl.edu	37	2	96959242	96959242	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014014.3	-1	reviewed	p.E616	1.000	51	0%	33	36.4%	22	72.7%	-	-	-	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
SNRNP200	23020	genome.wustl.edu	37	2	96964573	96964573	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014014.3	-1	reviewed	p.E288*	1.000	46	0%	30	26.7%	45	8.8%	-	-	-	NULL
SNRNP200	23020	genome.wustl.edu	37	2	96967390	96967390	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014014.3	-1	reviewed	p.R149L	0.998	203	0.5%	154	40.3%	24	95.8%	possibly_damaging(0.607)	deleterious(0.01)	deleterious(0.616)	NULL
SNRNP200	23020	genome.wustl.edu	37	2	96970578	96970578	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014014.3	-1	reviewed	p.R25H	1.000	48	0%	49	40.8%	26	73%	possibly_damaging(0.824)	tolerated(0.11)	deleterious(0.584)	NULL
ITPRIPL1	150771	genome.wustl.edu	37	2	96993026	96993026	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000420728	+1	known	p.S251L	0.031	27	0%	17	58.8%	1	100%	-	-	-	NULL
ITPRIPL1	150771	genome.wustl.edu	37	2	96993439	96993439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178495.5	+1	validated	p.R365H	1.000	16	0%	16	50%	0	-	probably_damaging(0.995)	tolerated(0.18)	deleterious(0.514)	NULL
NCAPH	23397	genome.wustl.edu	37	2	97009967	97009967	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015341.3	+1	reviewed	p.E240D	1.000	98	0%	49	55.1%	15	6.6%	benign(0.332)	tolerated(0.43)	neutral(0.117)	HMMPfam_Barren
KANSL3	55683	genome.wustl.edu	37	2	97274344	97274344	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001115016.1	-1	validated	p.V548M	0.866	149	0%	119	21%	18	27.7%	benign(0.07)	tolerated(0.2)	neutral(0.054)	NULL
KANSL3	55683	genome.wustl.edu	37	2	97297055	97297055	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001115016.1	-1	validated	p.V127A	1.000	42	0%	20	45%	20	40%	benign(0.153)	deleterious(0)	neutral(0.458)	NULL
SEMA4C	54910	genome.wustl.edu	37	2	97527340	97527340	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017789.4	-1	validated	p.C550R	0.454	58	0%	54	14.8%	42	16.6%	benign(0.004)	tolerated(0.12)	neutral(0.261)	HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold
SEMA4C	54910	genome.wustl.edu	37	2	97529978	97529978	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017789.4	-1	validated	p.G368	1.000	13	0%	16	31.2%	20	40%	-	-	-	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
SEMA4C	54910	genome.wustl.edu	37	2	97530836	97530836	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017789.4	-1	validated	p.G217	0.988	27	0%	32	34.4%	27	40.7%	-	-	-	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
FAM178B	51252	genome.wustl.edu	37	2	97544190	97544190	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122646.2	-1	validated	p.V574A	0.999	26	0%	18	27.8%	1	0%	possibly_damaging(0.888)	tolerated(0.53)	neutral(0.355)	NULL
ANKRD36	375248	genome.wustl.edu	37	2	97817662	97817662	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000461153	+1	known	p.R383Q	0.001	926	0%	271	23.6%	0	-	possibly_damaging(0.939)	tolerated(0.25)	neutral(0.421)	NULL
ANKRD36	375248	genome.wustl.edu	37	2	97830154	97830154	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000461153	+1	known	p.D493	0.014	550	0%	281	18.1%	3	33.3%	-	-	-	NULL
ACTR1B	10120	genome.wustl.edu	37	2	98274984	98274984	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005735.3	-1	reviewed	p.R188H	1.000	40	0%	41	51.2%	98	41.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
ZAP70	7535	genome.wustl.edu	37	2	98351867	98351867	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079.3	+1	reviewed	p.V413I	1.000	8	0.000	10	0.500	3	0%	benign(0.134)	deleterious(0)	neutral(0.456)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
TMEM131	23505	genome.wustl.edu	37	2	98409380	98409380	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015348.1	-1	validated	p.R1205*	0.928	112	0%	86	51.2%	37	35.1%	-	-	-	NULL
TMEM131	23505	genome.wustl.edu	37	2	98422110	98422110	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015348.1	-1	validated	p.K704N	1.000	313	0%	130	43.8%	13	61.5%	probably_damaging(0.999)	tolerated(0.21)	deleterious(0.534)	NULL
VWA3B	200403	genome.wustl.edu	37	2	98907108	98907108	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000422503	+1	known	p.F1060	0.002	331	0%	150	38%	0	-	-	-	-	NULL
INPP4A	3631	genome.wustl.edu	37	2	99204018	99204018	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134224.1	+1	reviewed	p.F961V	1.000	157	0%	84	48.8%	8	50%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
COA5	493753	genome.wustl.edu	37	2	99220648	99220648	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008215.1	-1	predicted	p.K36Q	1.000	240	0%	129	47.3%	59	38.9%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_Pet191_N
MGAT4A	11320	genome.wustl.edu	37	2	99291596	99291596	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012214.2	-1	reviewed	p.S102F	1.000	458	0%	208	47.6%	0	-	benign(0.002)	tolerated(0.07)	neutral(0.319)	HMMPfam_Glyco_transf_54
C2orf55	343990	genome.wustl.edu	37	2	99438643	99438643	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207362.2	-1	validated	p.G698D	0.000	20	0%	15	40%	0	-	unknown(0)	tolerated(0.11)	-	NULL
TSGA10	80705	genome.wustl.edu	37	2	99634789	99634789	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025244.2	-1	validated	p.R649H	1.000	304	0%	192	34.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
MRPL30	51263	genome.wustl.edu	37	2	99804685	99804685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145212.2	+1	reviewed	p.R33S	1.000	322	0%	154	46.8%	19	57.8%	probably_damaging(0.969)	deleterious(0)	deleterious(0.856)	NULL
REV1	51455	genome.wustl.edu	37	2	100019260	100019260	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016316.2	-1	reviewed	p.E1130*	0.967	200	0%	106	50.9%	8	25%	-	-	-	NULL
REV1	51455	genome.wustl.edu	37	2	100065800	100065800	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016316.2	-1	reviewed	p.E116D	1.000	302	0%	127	48%	12	50%	benign(0.019)	tolerated(1)	neutral(0.001)	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain
CHST10	9486	genome.wustl.edu	37	2	101010058	101010058	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004854.3	-1	validated	p.F240	0.999	121	0%	83	33.7%	16	37.5%	-	-	-	HMMPfam_Sulfotransfer_2
PDCL3	79031	genome.wustl.edu	37	2	101186042	101186042	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024065.4	+1	validated	p.R76Q	1.000	141	0.7%	102	41.2%	44	43.1%	benign(0.053)	tolerated(0.79)	neutral(0.005)	HMMPfam_Phosducin,superfamily_Thiordxn-like_fd
NPAS2	4862	genome.wustl.edu	37	2	101611902	101611902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002518.3	+1	reviewed	p.S778L	0.971	46	0%	38	47.4%	28	53.5%	possibly_damaging(0.907)	deleterious(0.02)	deleterious(0.744)	NULL
TBC1D8	11138	genome.wustl.edu	37	2	101638923	101638923	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102426.1	-1	validated	p.P846T	1.000	16	0%	28	46.4%	17	29.4%	benign(0.009)	deleterious(0.03)	neutral(0.365)	superfamily_EF-hand
TBC1D8	11138	genome.wustl.edu	37	2	101638931	101638931	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102426.1	-1	validated	p.R843H	1.000	14	0%	29	41.4%	17	58.8%	benign(0.009)	tolerated(0.35)	neutral(0.021)	superfamily_EF-hand
TBC1D8	11138	genome.wustl.edu	37	2	101666942	101666942	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102426.1	-1	validated	p.V250M	0.998	32	0%	24	54.2%	15	53.3%	probably_damaging(0.974)	tolerated(0.08)	deleterious(0.716)	NULL
MAP4K4	9448	genome.wustl.edu	37	2	102456450	102456450	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145686.2	+1	reviewed	p.E315K	1.000	125	0%	59	59.3%	30	6.6%	unknown(0)	tolerated(0.15)	-	superfamily_Protein kinase-like (PK-like)
MAP4K4	9448	genome.wustl.edu	37	2	102481499	102481499	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145686.2	+1	reviewed	e18+1	1.000	70	0%	39	35.9%	0	-	-	-	-	-
IL1R2	7850	genome.wustl.edu	37	2	102632422	102632422	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004633.3	+1	reviewed	p.I141N	0.000	328	0%	164	21.3%	14	14.2%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	HMMSmart_IG,superfamily_SSF48726
IL18R1	8809	genome.wustl.edu	37	2	103013311	103013311	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003855.2	+1	reviewed	p.E531K	0.006	108	0%	54	46.3%	1	0%	benign(0.143)	tolerated(0.21)	neutral(0.056)	NULL
SLC9A4	389015	genome.wustl.edu	37	2	103142801	103142801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001011552.3	+1	validated	p.F678L	0.002	88	0%	50	52%	0	-	benign(0.071)	tolerated(0.61)	neutral(0.009)	NULL
SLC9A2	6549	genome.wustl.edu	37	2	103324696	103324696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003048.3	+1	validated	p.M729I	1.000	78	0%	58	37.9%	0	-	benign(0)	tolerated(0.11)	neutral(0.272)	NULL
SLC9A2	6549	genome.wustl.edu	37	2	103324876	103324876	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003048.3	+1	validated	p.P789	0.081	35	0%	29	37.9%	1	0%	-	-	-	NULL
MFSD9	84804	genome.wustl.edu	37	2	103335430	103335430	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032718.3	-1	validated	p.R292C	1.000	14	0%	16	31.2%	6	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
TGFBRAP1	9392	genome.wustl.edu	37	2	105889351	105889351	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142621.1	-1	validated	p.L645F	1.000	19	0%	21	38.1%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C2orf40	84417	genome.wustl.edu	37	2	106690499	106690499	+	Silent	SNP	G	G	A	rs183729457	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032411.2	+1	validated	p.A95	0.785	28	0%	16	31.2%	4	0%	-	-	-	NULL
UXS1	80146	genome.wustl.edu	37	2	106717549	106717549	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025076.3	-1	validated	p.L312I	0.889	28	0%	33	54.5%	54	33.3%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_Epimerase,superfamily_NAD(P)-binding Rossmann-fold domains
RGPD3	653489	genome.wustl.edu	37	2	107007935	107007935	+	Nonstop_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000452099	-1	known	p.*1016Y	0.016	775	0%	247	31.6%	0	-	-	-	-	NULL
RGPD3	653489	genome.wustl.edu	37	2	107041202	107041202	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144013.1	-1	validated	p.V1074A	0.964	404	0%	126	13.5%	5	0%	benign(0)	tolerated(0.26)	neutral(0.034)	HMMPfam_Ran_BP1,superfamily_SSF50729
RGPD3	653489	genome.wustl.edu	37	2	107052697	107052697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144013.1	-1	validated	p.G547V	1.000	416	0%	180	33.9%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
RGPD4	285190	genome.wustl.edu	37	2	108488640	108488640	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182588.2	+1	validated	p.R1394C	0.993	376	0%	113	27.4%	11	27.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ran_BP1,HMMSmart_RanBD,superfamily_SSF50729
SULT1C3	442038	genome.wustl.edu	37	2	108863671	108863671	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008743.1	+1	provisional	p.N7	0.000	196	0%	60	45%	0	-	-	-	-	NULL
SULT1C2	6819	genome.wustl.edu	37	2	108922022	108922022	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176825.2	+1	reviewed	p.D261G	1.000	135	0%	79	38%	1	100%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
GCC2	9648	genome.wustl.edu	37	2	109086351	109086351	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181453.3	+1	reviewed	p.K189T	0.396	133	0%	49	49%	7	71.4%	benign(0.071)	tolerated(0.19)	neutral(0.054)	NULL
LIMS1	3987	genome.wustl.edu	37	2	109293105	109293105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004987.3	+1	reviewed	p.R230H	1.000	226	0%	106	63.2%	36	61.1%	possibly_damaging(0.925)	deleterious(0.01)	deleterious(0.779)	HMMPfam_LIM,HMMSmart_LIM,superfamily_SSF57716
RANBP2	5903	genome.wustl.edu	37	2	109381387	109381387	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006267.4	+1	reviewed	p.L1464	0.999	167	0%	45	46.7%	31	54.8%	-	-	-	NULL
RANBP2	5903	genome.wustl.edu	37	2	109382374	109382374	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006267.4	+1	reviewed	p.Q1793H	1.000	118	0%	80	31.2%	40	60%	probably_damaging(0.975)	-	-	HMMPfam_zf-RanBP,HMMSmart_ZnF_RBZ,PatternScan_ZF_RANBP2_1
RANBP2	5903	genome.wustl.edu	37	2	109383365	109383365	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006267.4	+1	reviewed	p.A2124T	1.000	119	0%	54	42.6%	32	40.6%	probably_damaging(0.994)	-	-	HMMPfam_Ran_BP1,HMMSmart_RanBD,superfamily_SSF50729
CCDC138	165055	genome.wustl.edu	37	2	109429101	109429101	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000456512	+1	known	p.V187A	1.000	323	0%	119	42%	4	25%	-	-	-	NULL
EDAR	10913	genome.wustl.edu	37	2	109546628	109546628	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022336.3	-1	reviewed	p.T41M	0.996	21	0%	18	66.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SH3RF3	344558	genome.wustl.edu	37	2	110107252	110107252	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000309415	+1	known	p.S780	0.787	17	0%	15	33.3%	4	25%	-	-	-	NULL
SOWAHC	65124	genome.wustl.edu	37	2	110373301	110373301	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023016.3	+1	validated	p.R412H	0.923	13	0%	12	50%	5	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
BUB1	699	genome.wustl.edu	37	2	111398654	111398654	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004336.3	-1	reviewed	p.F971C	1.000	100	0%	36	50%	41	53.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
ACOXL	55289	genome.wustl.edu	37	2	111562850	111562850	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142807.1	+1	validated	p.V211M	0.982	75	0%	54	57.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Acyl-CoA dehydrogenase NM domain-like
RGPD8	727851	genome.wustl.edu	37	2	113157255	113157255	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000302558	-1	known	p.A670V	1.000	623	0%	241	34%	7	0%	possibly_damaging(0.852)	tolerated(0.34)	neutral(0.351)	NULL
POLR1B	84172	genome.wustl.edu	37	2	113322053	113322053	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019014.4	+1	validated	p.A575T	0.786	156	0%	130	44.6%	5	0%	benign(0.001)	tolerated(0.08)	neutral(0.300)	HMMPfam_RNA_pol_Rpa2_4,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
SLC20A1	6574	genome.wustl.edu	37	2	113416801	113416801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005415.3	+1	provisional	p.G357W	0.939	107	0%	64	45.3%	34	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PHO4
IL36G	56300	genome.wustl.edu	37	2	113737622	113737622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019618.2	+1	reviewed	p.A66D	0.000	206	0%	85	38.8%	1	0%	possibly_damaging(0.679)	tolerated(0.19)	neutral(0.291)	HMMSmart_SM00125,superfamily_Cytokine
IL36B	27177	genome.wustl.edu	37	2	113785528	113785528	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173178.1	-1	reviewed	p.E142	0.000	148	0%	57	57.9%	0	-	-	-	-	HMMPfam_IL1,HMMSmart_SM00125,superfamily_Cytokine
IL36B	27177	genome.wustl.edu	37	2	113786623	113786623	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014438.3	-1	reviewed	p.E52K	0.000	392	0%	122	38.5%	0	-	benign(0.132)	tolerated(0.17)	neutral(0.070)	superfamily_Cytokine
IL36B	27177	genome.wustl.edu	37	2	113788731	113788731	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014438.3	-1	reviewed	p.R5	0.000	91	0%	49	44.9%	0	-	-	-	-	NULL
PSD4	23550	genome.wustl.edu	37	2	113940791	113940791	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012455.2	+1	validated	p.A253V	0.992	56	0%	59	44.1%	8	12.5%	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
PSD4	23550	genome.wustl.edu	37	2	113951182	113951182	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012455.2	+1	validated	p.T682	0.993	130	0%	96	35.4%	18	44.4%	-	-	-	HMMPfam_Sec7,HMMSmart_SM00222,superfamily_Sec7 domain
PAX8	7849	genome.wustl.edu	37	2	113999608	113999608	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003466.3	-1	reviewed	p.S193I	0.006	28	0%	24	25%	160	51.2%	benign(0.069)	deleterious(0.03)	neutral(0.369)	NULL
CBWD2	150472	genome.wustl.edu	37	2	114220051	114220051	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172003.3	+1	validated	p.K214N	0.052	182	0%	59	47.5%	34	52.9%	benign(0)	tolerated(0.37)	neutral(0.019)	HMMPfam_cobW,superfamily_SSF52540
SLC35F5	80255	genome.wustl.edu	37	2	114500364	114500364	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025181.2	-1	provisional	p.S219P	1.000	337	0%	124	11.3%	29	6.8%	probably_damaging(0.982)	tolerated(0.05)	deleterious(0.772)	superfamily_Multidrug resistance efflux transporter EmrE
CCDC93	54520	genome.wustl.edu	37	2	118732462	118732462	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019044.3	-1	validated	p.S255	0.981	100	0%	66	50%	12	41.6%	-	-	-	NULL
STEAP3	55240	genome.wustl.edu	37	2	120005513	120005513	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182915.2	+1	validated	p.P261S	1.000	9	0.000	14	0.714	11	72.7%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	NULL
ENSG00000163075	0	genome.wustl.edu	37	2	120388372	120388372	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000443972	+1	known	p.R182Q	0.000	187	0%	137	47.4%	0	-	-	-	-	NULL
EPB41L5	57669	genome.wustl.edu	37	2	120858391	120858391	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020909.3	+1	validated	e15+1	1.000	68	0%	33	45.5%	0	-	-	-	-	-
GLI2	2736	genome.wustl.edu	37	2	121554926	121554926	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005270.4	+1	reviewed	p.S10	0.008	22	0%	14	50%	0	-	-	-	-	NULL
GLI2	2736	genome.wustl.edu	37	2	121555009	121555009	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005270.4	+1	reviewed	p.A38V	0.671	18	0%	11	54.5%	0	-	unknown(0)	deleterious(0)	-	NULL
GLI2	2736	genome.wustl.edu	37	2	121732619	121732619	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005270.4	+1	reviewed	p.I434	0.999	20	0%	27	44.4%	0	-	-	-	-	NULL
CLASP1	23332	genome.wustl.edu	37	2	122215308	122215308	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015282.2	-1	validated	p.P447H	1.000	277	0%	85	48.2%	14	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM repeat
CLASP1	23332	genome.wustl.edu	37	2	122227526	122227526	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000430234	-1	known	p.R23*	1.000	125	0%	53	45.3%	7	71.4%	-	-	-	NULL
TSN	7247	genome.wustl.edu	37	2	122513389	122513389	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004622.2	+1	reviewed	p.G12S	1.000	21	0%	26	50%	27	62.9%	benign(0.001)	tolerated(0.6)	neutral(0.004)	superfamily_Translin
CNTNAP5	129684	genome.wustl.edu	37	2	124999958	124999958	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130773.2	+1	reviewed	p.E123D	1.000	81	0%	30	53.3%	0	-	benign(0.155)	tolerated(0.3)	neutral(0.042)	HMMPfam_F5_F8_type_C,HMMSmart_FA58C,superfamily_Gal_bind_like
CYP27C1	339761	genome.wustl.edu	37	2	127944889	127944889	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001665.3	-1	reviewed	p.T359	0.715	62	1.6%	53	50.9%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP27C1	339761	genome.wustl.edu	37	2	127950722	127950722	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001665.3	-1	reviewed	p.S317N	1.000	49	0%	45	42.2%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450
ERCC3	2071	genome.wustl.edu	37	2	128051229	128051229	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000122.1	-1	reviewed	p.N32D	0.753	75	0%	74	43.2%	25	44%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
ENSG00000200250	0	genome.wustl.edu	37	2	128074538	128074538	+	RNA	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000363380	+1	novel	NULL	0.002	122	0.8%	45	55.6%	0	-	-	-	-	-
MYO7B	4648	genome.wustl.edu	37	2	128384850	128384850	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000272666	+1	known	p.L1446I	0.964	29	0%	39	25.6%	0	-	possibly_damaging(0.609)	deleterious(0)	deleterious(0.655)	NULL
WDR33	55339	genome.wustl.edu	37	2	128481980	128481980	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018383.3	-1	reviewed	p.E375K	1.000	87	0%	60	31.7%	6	50%	unknown(0)	deleterious(0.01)	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
WDR33	55339	genome.wustl.edu	37	2	128528495	128528495	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018383.3	-1	reviewed	p.A21T	1.000	268	0%	136	24.3%	23	30.4%	possibly_damaging(0.837)	tolerated(0.1)	deleterious(0.606)	NULL
POLR2D	5433	genome.wustl.edu	37	2	128610526	128610526	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004805.3	-1	reviewed	p.N76S	1.000	235	0%	132	40.9%	16	37.5%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	HMMPfam_RNA_pol_Rpb4,HMMSmart_SM00657,superfamily_HRDC-like
UGGT1	56886	genome.wustl.edu	37	2	128877952	128877952	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020120.3	+1	validated	p.G299R	0.930	187	0%	85	49.4%	3	33.3%	benign(0.025)	tolerated(0.55)	neutral(0.008)	NULL
UGGT1	56886	genome.wustl.edu	37	2	128880799	128880799	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020120.3	+1	validated	p.T371	0.214	202	0%	71	38%	10	70%	-	-	-	NULL
UGGT1	56886	genome.wustl.edu	37	2	128918753	128918753	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020120.3	+1	validated	p.D912	0.849	168	0%	80	45%	18	44.4%	-	-	-	NULL
UGGT1	56886	genome.wustl.edu	37	2	128922345	128922345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020120.3	+1	validated	p.A956V	1.000	220	0%	108	53.7%	10	60%	benign(0.11)	tolerated(0.13)	neutral(0.261)	HMMPfam_UDP-g_GGTase
CCDC74B	91409	genome.wustl.edu	37	2	130900628	130900628	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000409234	-1	known	p.G170E	0.000	10	0%	14	42.9%	1	0%	probably_damaging(0.994)	-	-	NULL
SMPD4	55627	genome.wustl.edu	37	2	130911292	130911292	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000457039	-1	known	p.P260L	1.000	74	0%	69	37.7%	52	50%	-	-	-	NULL
TUBA3E	112714	genome.wustl.edu	37	2	130949508	130949508	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207312.2	-1	validated	p.E417*	0.993	110	0.9%	91	42.9%	0	-	-	-	-	superfamily_Tub_FtsZ_C
TUBA3E	112714	genome.wustl.edu	37	2	130952659	130952659	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207312.2	-1	validated	p.R123H	1.000	173	0%	171	39.8%	1	0%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ
TUBA3E	112714	genome.wustl.edu	37	2	130952710	130952710	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207312.2	-1	validated	p.G106D	1.000	158	0%	123	41.5%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ
LOC653781	653781	genome.wustl.edu	37	2	131379166	131379166	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_929706.3	+1	model	p.H312Y	0.001	1230	0.2%	392	21.4%	0	-	benign(0.423)	deleterious(0)	deleterious(0.582)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
FAM123C	205147	genome.wustl.edu	37	2	131519908	131519908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105193.1	+1	validated	p.P88L	0.994	11	0%	13	53.8%	0	-	benign(0)	tolerated(1)	-	HMMPfam_WTX
FAM123C	205147	genome.wustl.edu	37	2	131520861	131520861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105193.1	+1	validated	p.G406S	0.020	17	0%	25	40%	0	-	possibly_damaging(0.755)	tolerated(0.14)	deleterious(0.528)	HMMPfam_WTX
ARHGEF4	50649	genome.wustl.edu	37	2	131801909	131801909	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015320.2	+1	reviewed	p.R546Q	0.997	7	0.000	9	0.667	3	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
PLEKHB2	55041	genome.wustl.edu	37	2	131897756	131897756	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100623.1	+1	validated	p.G147E	1.000	59	0%	30	23.3%	39	20.5%	benign(0.277)	tolerated(0.09)	neutral(0.326)	NULL
POTEE	445582	genome.wustl.edu	37	2	131976393	131976393	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083538.1	+1	validated	p.L140M	0.079	109	0%	76	27.6%	1	100%	benign(0.043)	deleterious(0)	neutral(0.447)	superfamily_Ankyrin repeat
POTEE	445582	genome.wustl.edu	37	2	132021186	132021186	+	Missense_Mutation	SNP	G	G	A	rs62165277		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083538.1	+1	validated	p.G720S	1.000	122	0.8%	72	18.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
POTEE	445582	genome.wustl.edu	37	2	132021211	132021211	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083538.1	+1	validated	p.R728Q	1.000	100	0%	59	30.5%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
POTEE	445582	genome.wustl.edu	37	2	132021701	132021701	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083538.1	+1	validated	p.K891	1.000	33	0%	43	20.9%	0	-	-	-	-	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
LOC150786	150786	genome.wustl.edu	37	2	132120745	132120745	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077637.1	-1	validated	p.G183	0.955	491	0%	394	29.7%	0	-	-	-	-	superfamily_SSF52540
MIR663B	100313824	genome.wustl.edu	37	2	133014651	133014652	+	RNA	INS	-	-	C	rs111708138		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000408361	-1	known	NULL	0.027:0.014	-	-	-	-	-	-	-	-	-	-
ZNF806	646915	genome.wustl.edu	37	2	133074956	133074956	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001724242.2	+1	model	p.S139R	0.007	254	0%	80	20%	0	-	-	-	-	NULL
ZNF806	646915	genome.wustl.edu	37	2	133074966	133074966	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001724242.2	+1	model	p.V143I	0.028	253	0%	74	32.4%	0	-	-	-	-	NULL
ZNF806	646915	genome.wustl.edu	37	2	133075631	133075631	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001724242.2	+1	model	p.V364	0.543	237	0%	121	19%	0	-	-	-	-	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
NCKAP5	344148	genome.wustl.edu	37	2	133540092	133540092	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207363.2	-1	validated	p.T1431I	0.001	53	0%	31	12.9%	4	25%	benign(0.002)	tolerated(0.08)	neutral(0.300)	NULL
NCKAP5	344148	genome.wustl.edu	37	2	133541451	133541451	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207363.2	-1	validated	p.S978Y	0.027	15	0%	12	33.3%	1	0%	benign(0.267)	deleterious(0)	deleterious(0.473)	NULL
NCKAP5	344148	genome.wustl.edu	37	2	133542601	133542601	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207363.2	-1	validated	p.S595R	0.995	42	0%	37	16.2%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
MGAT5	4249	genome.wustl.edu	37	2	135102586	135102586	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002410.3	+1	validated	p.G355R	1.000	239	0%	75	13.3%	10	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
MGAT5	4249	genome.wustl.edu	37	2	135160633	135160633	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002410.3	+1	validated	p.K485N	0.996	171	0%	66	39.4%	18	38.8%	benign(0)	tolerated(0.28)	neutral(0.032)	NULL
CCNT2	905	genome.wustl.edu	37	2	135712051	135712051	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058241.1	+1	reviewed	p.V676M	1.000	228	0%	130	48.5%	24	45.8%	possibly_damaging(0.922)	tolerated(0.06)	deleterious(0.694)	NULL
YSK4	80122	genome.wustl.edu	37	2	135744160	135744160	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025052.3	-1	validated	p.G761D	0.000	76	0%	56	51.8%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
RAB3GAP1	22930	genome.wustl.edu	37	2	135809897	135809897	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012233.2	+1	reviewed	e1+2	1.000	128	0.8%	102	18.6%	1	100%	-	-	-	-
ZRANB3	84083	genome.wustl.edu	37	2	135985428	135985428	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032143.2	-1	provisional	p.T704	0.000	344	0%	197	12.7%	1	0%	-	-	-	NULL
ZRANB3	84083	genome.wustl.edu	37	2	136107737	136107737	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032143.2	-1	provisional	p.T136	0.978	143	0%	90	48.9%	2	50%	-	-	-	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
UBXN4	23190	genome.wustl.edu	37	2	136511773	136511773	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014607.3	+1	validated	p.G87*	1.000	317	0%	136	41.2%	29	0%	-	-	-	superfamily_Thiordxn-like_fd
UBXN4	23190	genome.wustl.edu	37	2	136513124	136513124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014607.3	+1	validated	p.G124D	0.631	135	0%	49	46.9%	40	80%	benign(0)	tolerated(0.64)	neutral(0.003)	NULL
UBXN4	23190	genome.wustl.edu	37	2	136540359	136540359	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014607.3	+1	validated	p.D477N	1.000	288	0%	112	14.3%	33	0%	possibly_damaging(0.948)	deleterious(0.04)	deleterious(0.740)	NULL
LCT	3938	genome.wustl.edu	37	2	136566103	136566103	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002299.2	-1	reviewed	p.T1272A	1.000	143	0%	100	48%	0	-	benign(0.271)	deleterious(0.01)	neutral(0.435)	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat,PatternScan_GLYCOSYL_HYDROL_F1_1
LCT	3938	genome.wustl.edu	37	2	136566238	136566238	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002299.2	-1	reviewed	p.E1227K	0.012	101	0%	78	46.2%	0	-	benign(0.196)	tolerated(0.92)	neutral(0.018)	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
LCT	3938	genome.wustl.edu	37	2	136566679	136566679	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002299.2	-1	reviewed	p.P1080T	0.998	36	0%	29	48.3%	0	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
LCT	3938	genome.wustl.edu	37	2	136567082	136567082	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002299.2	-1	reviewed	p.D945	0.224	37	0%	30	56.7%	0	-	-	-	-	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
LCT	3938	genome.wustl.edu	37	2	136570025	136570025	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002299.2	-1	reviewed	p.Q737*	0.000	79	0%	59	40.7%	0	-	-	-	-	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
LCT	3938	genome.wustl.edu	37	2	136570245	136570245	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002299.2	-1	reviewed	p.L663	0.959	60	0%	51	25.5%	0	-	-	-	-	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
DARS	1615	genome.wustl.edu	37	2	136670077	136670077	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001349.2	-1	validated	p.T403	0.076	204	0%	38	50%	91	45%	-	-	-	HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases
THSD7B	80731	genome.wustl.edu	37	2	138030178	138030178	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080427.1	+1	provisional	p.D750A	1.000	388	0%	96	40.6%	0	-	probably_damaging(0.998)	tolerated(0.07)	deleterious(0.793)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
THSD7B	80731	genome.wustl.edu	37	2	138400060	138400060	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080427.1	+1	provisional	p.R1239*	1.000	74	0%	30	40%	0	-	-	-	-	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
THSD7B	80731	genome.wustl.edu	37	2	138400167	138400167	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080427.1	+1	provisional	p.S1274R	1.000	44	0%	30	53.3%	0	-	benign(0.392)	tolerated(1)	neutral(0.126)	HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
THSD7B	80731	genome.wustl.edu	37	2	138414394	138414394	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080427.1	+1	provisional	p.E1349D	0.645	53	0%	22	50%	0	-	possibly_damaging(0.474)	tolerated(0.59)	neutral(0.161)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
NXPH2	11249	genome.wustl.edu	37	2	139428686	139428686	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007226.2	-1	validated	p.A201T	0.999	86	0%	48	45.8%	0	-	benign(0.011)	tolerated(0.73)	neutral(0.002)	HMMPfam_Neurexophilin
LRP1B	53353	genome.wustl.edu	37	2	141083335	141083335	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000437977	-1	known	p.N344S	1.000	137	0%	49	34.7%	0	-	-	-	-	HMMPfam_Ldl_recept_b,superfamily_YWTD domain
LRP1B	53353	genome.wustl.edu	37	2	141260530	141260530	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	e54+2	1.000	247	0.4%	91	28.6%	0	-	-	-	-	-
LRP1B	53353	genome.wustl.edu	37	2	141294251	141294251	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.S2514L	1.000	163	0.6%	51	43.1%	0	-	benign(0.026)	tolerated(0.13)	neutral(0.254)	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,superfamily_LDL_rcpt_classA_cys-rich,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141299378	141299378	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.I2453V	1.000	209	0%	42	33.3%	0	-	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	HMMPfam_Ldl_recept_b,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141457941	141457941	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.A2226V	1.000	344	0%	75	30.7%	0	-	probably_damaging(0.977)	deleterious(0.01)	deleterious(0.825)	superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141458114	141458114	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.C2168	0.997	88	0%	26	19.2%	0	-	-	-	-	HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_2,superfamily_SSF57196
LRP1B	53353	genome.wustl.edu	37	2	141526791	141526791	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.F1917V	1.000	190	0%	76	25%	0	-	possibly_damaging(0.591)	tolerated(0.36)	neutral(0.224)	HMMSmart_LY,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141571369	141571369	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.S1739L	1.000	303	1%	109	37.6%	0	-	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141707930	141707930	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.H1004N	1.000	43	0%	25	36%	0	-	benign(0.076)	tolerated(0.32)	neutral(0.029)	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,superfamily_LDL_rcpt_classA_cys-rich
LRP1B	53353	genome.wustl.edu	37	2	141777550	141777550	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.K637N	1.000	178	0%	54	44.4%	0	-	probably_damaging(0.98)	deleterious(0.04)	deleterious(0.773)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141819649	141819649	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018557.2	-1	validated	p.N403H	0.996	483	0%	73	41.1%	0	-	possibly_damaging(0.491)	tolerated(0.26)	neutral(0.198)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
ARHGAP15	55843	genome.wustl.edu	37	2	144193242	144193242	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018460.3	+1	validated	p.A183T	1.000	389	0%	98	43.9%	2	0%	benign(0.195)	tolerated(0.24)	neutral(0.056)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
ARHGAP15	55843	genome.wustl.edu	37	2	144244977	144244977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018460.3	+1	validated	p.D247N	1.000	213	0%	76	34.2%	1	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
ZEB2	9839	genome.wustl.edu	37	2	145147195	145147195	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014795.3	-1	reviewed	p.G1156	0.988	154	0%	102	50%	5	0%	-	-	-	NULL
ZEB2	9839	genome.wustl.edu	37	2	145147312	145147312	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014795.3	-1	reviewed	p.T1117	0.993	65	0%	66	39.4%	2	0%	-	-	-	NULL
ZEB2	9839	genome.wustl.edu	37	2	145157704	145157704	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014795.3	-1	reviewed	p.T350	1.000	202	0%	76	43.4%	0	-	-	-	-	NULL
ZEB2	9839	genome.wustl.edu	37	2	145162587	145162587	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014795.3	-1	reviewed	p.K136N	1.000	138	0%	56	42.9%	2	0%	possibly_damaging(0.895)	deleterious(0.01)	deleterious(0.758)	NULL
ZEB2	9839	genome.wustl.edu	37	2	145182378	145182378	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014795.3	-1	reviewed	p.I130V	0.997	302	0%	118	48.3%	2	0%	benign(0.004)	tolerated(0.35)	neutral(0.021)	NULL
ACVR2A	92	genome.wustl.edu	37	2	148684697	148684697	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001616.3	+1	reviewed	p.A466T	1.000	346	0%	73	37%	12	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ORC4	5000	genome.wustl.edu	37	2	148731063	148731063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002552.2	-1	reviewed	p.R30C	1.000	270	0%	79	39.2%	16	37.5%	possibly_damaging(0.91)	deleterious(0.01)	deleterious(0.768)	superfamily_SSF52540
MBD5	55777	genome.wustl.edu	37	2	149227408	149227408	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000416015	+1	known	p.S372F	1.000	55	0%	20	45%	3	66.6%	-	-	-	NULL
KIF5C	3800	genome.wustl.edu	37	2	149830017	149830017	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000435030	+1	known	p.D429N	1.000	111	0%	60	10%	1	0%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
KIF5C	3800	genome.wustl.edu	37	2	149850990	149850990	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000435030	+1	known	p.R654K	1.000	64	0%	42	42.9%	3	100%	benign(0)	tolerated(1)	-	NULL
KIF5C	3800	genome.wustl.edu	37	2	149866704	149866704	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000435030	+1	known	p.L869P	1.000	11	0%	11	36.4%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LYPD6	130574	genome.wustl.edu	37	2	150294245	150294245	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194317.2	+1	provisional	p.A8V	1.000	50	0%	22	45.5%	10	70%	possibly_damaging(0.949)	deleterious(0)	deleterious(0.838)	NULL
MMADHC	27249	genome.wustl.edu	37	2	150426582	150426582	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015702.2	-1	reviewed	p.R266H	1.000	283	0%	161	42.2%	160	43.1%	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	HMMPfam_DUF2246
RBM43	375287	genome.wustl.edu	37	2	152107429	152107429	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198557.2	-1	validated	p.K355N	0.000	567	0%	268	35.1%	1	0%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
RBM43	375287	genome.wustl.edu	37	2	152107515	152107515	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198557.2	-1	validated	p.L327I	0.000	610	0%	267	20.2%	5	60%	benign(0.001)	tolerated(0.71)	neutral(0.002)	NULL
RIF1	55183	genome.wustl.edu	37	2	152273410	152273410	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000414861	+1	known	p.R158C	1.000	495	0%	244	43.4%	1	100%	-	-	-	superfamily_ARM repeat
RIF1	55183	genome.wustl.edu	37	2	152276763	152276763	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018151.4	+1	reviewed	p.V188G	1.000	147	0%	107	44.9%	10	70%	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	superfamily_ARM repeat
RIF1	55183	genome.wustl.edu	37	2	152292042	152292042	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000414861	+1	known	p.V373M	0.998	528	0.2%	259	44.4%	10	40%	-	-	-	NULL
RIF1	55183	genome.wustl.edu	37	2	152311556	152311556	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000414861	+1	known	p.W822*	0.993	262	0%	106	41.5%	8	50%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	NULL
RIF1	55183	genome.wustl.edu	37	2	152320341	152320341	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018151.4	+1	reviewed	p.N1436T	0.977	75	0%	42	35.7%	10	20%	possibly_damaging(0.645)	tolerated(0.25)	neutral(0.263)	superfamily_ARM repeat
RIF1	55183	genome.wustl.edu	37	2	152322130	152322130	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018151.4	+1	reviewed	p.E2032D	0.212	123	0%	67	29.9%	10	60%	probably_damaging(0.996)	tolerated(0.46)	deleterious(0.474)	superfamily_ARM repeat
RIF1	55183	genome.wustl.edu	37	2	152331502	152331502	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018151.4	+1	reviewed	p.E2446K	1.000	197	0.5%	76	50%	11	54.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NEB	4703	genome.wustl.edu	37	2	152357903	152357903	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000509223	-1	known	e23+2	1.000	386	0.3%	126	32.5%	0	-	-	-	-	-
NEB	4703	genome.wustl.edu	37	2	152370908	152370908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	p.R5983H	1.000	269	0%	141	23.4%	0	-	probably_damaging(0.967)	tolerated(0.14)	deleterious(0.658)	HMMPfam_Nebulin
NEB	4703	genome.wustl.edu	37	2	152381754	152381754	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	p.G5698*	1.000	307	0%	104	49%	0	-	-	-	-	HMMPfam_Nebulin
NEB	4703	genome.wustl.edu	37	2	152383503	152383503	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	p.G5591S	1.000	234	0%	123	48%	0	-	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_Nebulin
NEB	4703	genome.wustl.edu	37	2	152410418	152410418	+	Missense_Mutation	SNP	C	C	T	rs149596493	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	p.R4816H	1.000	111	0%	71	12.7%	0	-	benign(0.002)	tolerated(0.66)	neutral(0.003)	HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152411513	152411513	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	p.L4753	0.937	217	0%	85	51.8%	0	-	-	-	-	NULL
NEB	4703	genome.wustl.edu	37	2	152520060	152520060	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	e43+2	1.000	227	0%	96	33.3%	0	-	-	-	-	-
NEB	4703	genome.wustl.edu	37	2	152553969	152553969	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	p.K420N	0.003	332	0%	228	18.4%	0	-	benign(0)	tolerated(0.34)	neutral(0.023)	HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152580857	152580857	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	p.E177K	1.000	171	0%	77	50.6%	0	-	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMPfam_Nebulin,HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152584318	152584318	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004543.4	-1	reviewed	p.A61S	0.003	111	0%	39	46.2%	0	-	benign(0.004)	tolerated(0.17)	neutral(0.059)	NULL
CACNB4	785	genome.wustl.edu	37	2	152717245	152717245	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000726.3	-1	reviewed	p.S283L	1.000	264	0%	153	38.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Ca_channel_B,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
FMNL2	114793	genome.wustl.edu	37	2	153486387	153486387	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052905.3	+1	reviewed	p.V840I	1.000	505	0%	227	40.1%	18	38.8%	probably_damaging(0.977)	tolerated(0.11)	deleterious(0.691)	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd
FMNL2	114793	genome.wustl.edu	37	2	153494186	153494186	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052905.3	+1	reviewed	p.K982E	1.000	422	0%	171	46.2%	37	51.3%	possibly_damaging(0.604)	deleterious(0.01)	deleterious(0.615)	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd
PRPF40A	55660	genome.wustl.edu	37	2	153533238	153533238	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017892.3	-1	validated	p.P238S	0.998	296	0%	199	44.2%	33	42.4%	benign(0.011)	tolerated(0.58)	neutral(0.005)	NULL
GALNT13	114805	genome.wustl.edu	37	2	155098576	155098576	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052917.2	+1	validated	p.P115	0.999	278	0%	114	43%	0	-	-	-	-	superfamily_Nucleotide-diphospho-sugar transferases
GALNT13	114805	genome.wustl.edu	37	2	155295140	155295140	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052917.2	+1	validated	p.D478N	1.000	433	0.2%	161	44.1%	0	-	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
ACVR1C	130399	genome.wustl.edu	37	2	158399252	158399252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145259.2	-1	validated	p.D356N	1.000	278	0.4%	89	53.9%	1	0%	probably_damaging(0.997)	deleterious(0.05)	deleterious(0.811)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ACVR1	90	genome.wustl.edu	37	2	158594104	158594104	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105.4	-1	reviewed	p.R490H	1.000	320	0%	133	46.6%	41	43.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Kinase_like,HMMPfam_Pkinase
UPP2	151531	genome.wustl.edu	37	2	158971715	158971715	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135098.1	+1	validated	p.C152R	1.000	139	0%	39	43.6%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PNP_UDP_1,superfamily_Purine and uridine phosphorylases
CCDC148	130940	genome.wustl.edu	37	2	159107421	159107421	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138803.3	-1	validated	p.R372C	0.998	370	0.3%	97	36.1%	0	-	benign(0.314)	tolerated(0.12)	neutral(0.359)	NULL
PKP4	8502	genome.wustl.edu	37	2	159488361	159488361	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003628.3	+1	reviewed	p.G417E	1.000	80	0%	46	23.9%	57	21%	benign(0.006)	tolerated(0.53)	neutral(0.007)	NULL
TANC1	85461	genome.wustl.edu	37	2	160087297	160087297	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033394.2	+1	validated	p.V1787G	0.000	175	0%	91	46.2%	22	40.9%	benign(0)	tolerated(0.42)	neutral(0.014)	NULL
BAZ2B	29994	genome.wustl.edu	37	2	160304878	160304878	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013450.2	-1	validated	p.G126V	0.632	260	0%	97	41.2%	3	33.3%	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	NULL
MARCH7	64844	genome.wustl.edu	37	2	160619503	160619503	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022826.2	+1	validated	p.R669Q	1.000	162	0%	90	53.3%	52	32.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CD302	9936	genome.wustl.edu	37	2	160628524	160628524	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014880.4	-1	validated	p.T179	0.524	224	0%	108	42.6%	16	18.7%	-	-	-	NULL
PLA2R1	22925	genome.wustl.edu	37	2	160840477	160840477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007366.3	-1	validated	p.E715D	1.000	136	0%	41	70.7%	2	100%	probably_damaging(0.999)	tolerated(0.49)	deleterious(0.501)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
RBMS1	5937	genome.wustl.edu	37	2	161169731	161169731	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016836.3	-1	reviewed	p.P113H	1.000	49	0%	31	48.4%	13	46.1%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
SLC4A10	57282	genome.wustl.edu	37	2	162815003	162815003	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022058.3	+1	reviewed	p.P904S	1.000	787	0.1%	298	45.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HCO3_cotransp,PatternScan_HTH_ARAC_FAMILY_1
SLC4A10	57282	genome.wustl.edu	37	2	162821645	162821645	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022058.3	+1	reviewed	p.E1011K	1.000	400	0%	176	36.4%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
FAP	2191	genome.wustl.edu	37	2	163055301	163055301	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004460.2	-1	reviewed	p.S456	0.984	208	0%	91	47.3%	4	0%	-	-	-	HMMPfam_DPPIV_N,superfamily_SSF82171
FAP	2191	genome.wustl.edu	37	2	163070502	163070502	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004460.2	-1	reviewed	p.S316	0.026	165	0%	67	38.8%	5	0%	-	-	-	HMMPfam_DPPIV_N,superfamily_SSF82171
KCNH7	90134	genome.wustl.edu	37	2	163253383	163253383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033272.2	-1	reviewed	p.A827V	1.000	260	0%	51	37.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like
KCNH7	90134	genome.wustl.edu	37	2	163374308	163374308	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033272.2	-1	reviewed	p.S275L	1.000	158	0%	40	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KCNH7	90134	genome.wustl.edu	37	2	163374592	163374592	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033272.2	-1	reviewed	p.P180	0.041	119	0%	29	48.3%	0	-	-	-	-	NULL
FIGN	55137	genome.wustl.edu	37	2	164467215	164467215	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018086.2	-1	validated	p.F376C	1.000	115	0%	75	41.3%	2	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
GRB14	2888	genome.wustl.edu	37	2	165476243	165476243	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004490.2	-1	reviewed	p.V93A	1.000	430	0%	245	38.4%	4	75%	benign(0.415)	tolerated(0.21)	neutral(0.178)	NULL
GRB14	2888	genome.wustl.edu	37	2	165476263	165476263	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004490.2	-1	reviewed	p.C86*	1.000	497	0%	264	47.7%	3	0%	-	-	-	NULL
COBLL1	22837	genome.wustl.edu	37	2	165550941	165550941	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014900.3	-1	validated	p.P1025	0.136	206	0%	89	42.7%	26	42.3%	-	-	-	NULL
COBLL1	22837	genome.wustl.edu	37	2	165578655	165578655	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014900.3	-1	validated	p.D309G	0.970	95	0%	55	49.1%	7	28.5%	benign(0.009)	tolerated(1)	neutral(0.001)	HMMPfam_Cobl
SLC38A11	151258	genome.wustl.edu	37	2	165754980	165754980	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173512.1	-1	provisional	p.Q374H	0.338	111	0%	39	56.4%	0	-	benign(0.159)	tolerated(0.17)	neutral(0.073)	NULL
SLC38A11	151258	genome.wustl.edu	37	2	165796032	165796032	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173512.1	-1	provisional	p.F77L	1.000	310	0%	79	41.8%	0	-	benign(0)	tolerated(0.93)	-	NULL
SCN3A	6328	genome.wustl.edu	37	2	165947740	165947740	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006922.3	-1	reviewed	p.I1641	1.000	174	0%	95	14.7%	1	0%	-	-	-	HMMPfam_Ion_trans,superfamily_SSF81324
SCN3A	6328	genome.wustl.edu	37	2	165987768	165987768	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006922.3	-1	reviewed	p.R851*	0.847	161	0%	53	50.9%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_SSF81324
SCN3A	6328	genome.wustl.edu	37	2	165997338	165997338	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006922.3	-1	reviewed	p.P614	0.004	91	1.1%	41	56.1%	3	0%	-	-	-	NULL
SCN2A	6326	genome.wustl.edu	37	2	166167048	166167048	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040142.1	+1	reviewed	p.T305A	0.818	365	0%	104	52.9%	0	-	benign(0.206)	deleterious(0.03)	neutral(0.385)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN2A	6326	genome.wustl.edu	37	2	166170586	166170586	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040142.1	+1	reviewed	p.E451K	1.000	173	0%	54	63%	0	-	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
SCN2A	6326	genome.wustl.edu	37	2	166179835	166179835	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040142.1	+1	reviewed	p.P614L	1.000	18	0%	15	26.7%	0	-	benign(0.177)	deleterious(0.02)	neutral(0.400)	NULL
SCN2A	6326	genome.wustl.edu	37	2	166187855	166187855	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040142.1	+1	reviewed	p.R722I	1.000	325	0%	102	11.8%	0	-	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	superfamily_Voltage-gated potassium channels
SCN2A	6326	genome.wustl.edu	37	2	166211116	166211116	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040142.1	+1	reviewed	p.S1112A	1.000	201	0%	90	45.6%	0	-	probably_damaging(0.994)	tolerated(0.06)	deleterious(0.774)	HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels
SCN2A	6326	genome.wustl.edu	37	2	166246184	166246184	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040142.1	+1	reviewed	p.E1956D	0.990	88	0%	28	39.3%	0	-	benign(0.022)	tolerated(0.14)	neutral(0.251)	NULL
CSRNP3	80034	genome.wustl.edu	37	2	166535346	166535346	+	Nonsense_Mutation	SNP	C	C	T	rs186955356	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024969.3	+1	validated	p.R281*	1.000	110	0%	43	53.5%	0	-	-	-	-	NULL
GALNT3	2591	genome.wustl.edu	37	2	166615328	166615328	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004482.3	-1	reviewed	p.F374L	1.000	498	0%	115	39.1%	6	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
SCN1A	6323	genome.wustl.edu	37	2	166898845	166898845	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006920.4	-1	reviewed	p.Q700	0.992	333	0%	147	38.8%	0	-	-	-	-	NULL
SCN1A	6323	genome.wustl.edu	37	2	166900428	166900428	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006920.4	-1	reviewed	p.F598	1.000	73	0%	46	37%	0	-	-	-	-	NULL
SCN1A	6323	genome.wustl.edu	37	2	166904186	166904186	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006920.4	-1	reviewed	p.S374F	1.000	288	0%	94	13.8%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_Ion_trans,superfamily_SSF81324
SCN9A	6335	genome.wustl.edu	37	2	167055332	167055332	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002977.3	-1	reviewed	p.E1928D	0.970	541	0%	248	43.5%	0	-	benign(0.014)	tolerated(0.27)	neutral(0.034)	NULL
SCN9A	6335	genome.wustl.edu	37	2	167085303	167085303	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002977.3	-1	reviewed	p.S1357	0.000	231	0%	135	34.8%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN9A	6335	genome.wustl.edu	37	2	167129146	167129146	+	Silent	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002977.3	-1	reviewed	p.I1027	0.485	571	0%	179	46.4%	0	-	-	-	-	HMMPfam_Na_trans_assoc
SCN9A	6335	genome.wustl.edu	37	2	167143025	167143025	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002977.3	-1	reviewed	p.E475*	1.000	141	0%	77	35.1%	0	-	-	-	-	NULL
SCN9A	6335	genome.wustl.edu	37	2	167160829	167160829	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002977.3	-1	reviewed	p.E203*	1.000	415	0%	151	42.4%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN7A	6332	genome.wustl.edu	37	2	167262093	167262093	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002976.2	-1	validated	p.I1682	0.000	459	0%	91	35.2%	0	-	-	-	-	NULL
SCN7A	6332	genome.wustl.edu	37	2	167330355	167330355	+	Missense_Mutation	SNP	C	C	T	rs141810453	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002976.2	-1	validated	p.V133I	0.013	131	0%	37	35.1%	0	-	benign(0.001)	tolerated(0.68)	neutral(0.002)	superfamily_Voltage-gated potassium channels
XIRP2	129446	genome.wustl.edu	37	2	168098372	168098372	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152381.4	+1	validated	p.K376N	0.013	266	0%	116	37.9%	0	-	benign(0.005)	tolerated(0.94)	-	NULL
XIRP2	129446	genome.wustl.edu	37	2	168101108	168101108	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152381.4	+1	validated	p.Y1069C	1.000	104	0%	49	36.7%	0	-	probably_damaging(0.953)	deleterious(0.03)	deleterious(0.761)	NULL
XIRP2	129446	genome.wustl.edu	37	2	168104087	168104087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152381.4	+1	validated	p.T2062M	0.000	138	0%	44	45.5%	0	-	benign(0)	tolerated(0.14)	neutral(0.249)	NULL
XIRP2	129446	genome.wustl.edu	37	2	168104626	168104626	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152381.4	+1	validated	p.R2242W	0.984	139	0%	39	38.5%	0	-	benign(0.189)	deleterious(0)	neutral(0.462)	NULL
XIRP2	129446	genome.wustl.edu	37	2	168104752	168104752	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152381.4	+1	validated	p.E2284*	0.997	82	0%	29	48.3%	0	-	-	-	-	NULL
XIRP2	129446	genome.wustl.edu	37	2	168106247	168106247	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152381.4	+1	validated	p.V2782A	0.000	85	0%	20	40%	0	-	benign(0.004)	deleterious(0.04)	neutral(0.349)	NULL
XIRP2	129446	genome.wustl.edu	37	2	168107319	168107319	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152381.4	+1	validated	p.N3139	0.000	101	0%	32	34.4%	0	-	-	-	-	NULL
XIRP2	129446	genome.wustl.edu	37	2	168114597	168114597	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079810.2	+1	validated	p.L514S	0.000	121	0%	29	37.9%	0	-	benign(0.008)	deleterious(0.03)	neutral(0.364)	NULL
CERS6	253782	genome.wustl.edu	37	2	169417815	169417815	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203463.1	+1	validated	p.T130	0.014	134	0%	47	36.2%	17	52.9%	-	-	-	HMMSmart_HOX,HMMSmart_TLC,superfamily_Homeodomain_like
ABCB11	8647	genome.wustl.edu	37	2	169792839	169792839	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003742.2	-1	reviewed	p.L905	0.007	110	0%	66	34.8%	0	-	-	-	-	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
LRP2	4036	genome.wustl.edu	37	2	169989157	169989157	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004525.2	-1	reviewed	p.Y4552C	1.000	369	0%	142	11.3%	1	100%	possibly_damaging(0.831)	deleterious(0.01)	deleterious(0.722)	NULL
LRP2	4036	genome.wustl.edu	37	2	170033019	170033019	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004525.2	-1	reviewed	p.C3491	0.338	69	0%	65	40%	1	100%	-	-	-	HMMSmart_EGF
LRP2	4036	genome.wustl.edu	37	2	170059306	170059306	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004525.2	-1	reviewed	p.N2723	0.521	151	0%	98	48%	2	0%	-	-	-	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich
LRP2	4036	genome.wustl.edu	37	2	170062875	170062875	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004525.2	-1	reviewed	p.S2452Y	0.003	141	0%	53	24.5%	0	-	benign(0.001)	tolerated(0.17)	neutral(0.059)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP2	4036	genome.wustl.edu	37	2	170088338	170088338	+	Missense_Mutation	SNP	C	C	T	rs193082017	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004525.2	-1	reviewed	p.A1705T	0.184	57	0%	33	57.6%	1	0%	benign(0.002)	tolerated(0.54)	neutral(0.007)	HMMSmart_EGF,superfamily_SSF57196
LRP2	4036	genome.wustl.edu	37	2	170096276	170096276	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004525.2	-1	reviewed	p.S1352N	1.000	99	0%	61	50.8%	0	-	probably_damaging(0.979)	tolerated(0.18)	deleterious(0.478)	HMMSmart_EGF,superfamily_SSF57196
FASTKD1	79675	genome.wustl.edu	37	2	170411657	170411657	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024622.3	-1	validated	p.A397	0.807	293	0%	131	44.3%	6	83.3%	-	-	-	NULL
FASTKD1	79675	genome.wustl.edu	37	2	170428367	170428367	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024622.3	-1	validated	p.R58I	0.985	349	0.3%	163	38.7%	4	75%	possibly_damaging(0.464)	tolerated(0.06)	deleterious(0.475)	NULL
KLHL23	151230	genome.wustl.edu	37	2	170592000	170592000	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144711.4	+1	validated	p.R159Q	1.000	118	0.8%	49	51%	5	60%	benign(0.089)	tolerated(0.3)	neutral(0.035)	HMMPfam_BACK
UBR3	130507	genome.wustl.edu	37	2	170806378	170806378	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172070.3	+1	validated	p.E1116D	1.000	258	0%	99	49.5%	8	50%	benign(0.003)	tolerated(0.4)	neutral(0.016)	NULL
MYO3B	140469	genome.wustl.edu	37	2	171073877	171073877	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138995.3	+1	validated	p.V192A	1.000	220	0%	99	44.4%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
MYO3B	140469	genome.wustl.edu	37	2	171300522	171300522	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138995.3	+1	validated	p.S899Y	1.000	275	0%	92	47.8%	0	-	benign(0.244)	deleterious(0.05)	neutral(0.370)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
GAD1	2571	genome.wustl.edu	37	2	171710463	171710463	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000817.2	+1	reviewed	p.T448	0.760	124	0%	86	51.2%	4	0%	-	-	-	HMMPfam_Pyridoxal_deC,superfamily_PLP-dependent transferases
GAD1	2571	genome.wustl.edu	37	2	171713582	171713582	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000817.2	+1	reviewed	p.L490I	1.000	218	0%	95	37.9%	4	100%	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	HMMPfam_Pyridoxal_deC,superfamily_PLP-dependent transferases
METTL8	79828	genome.wustl.edu	37	2	172182564	172182564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000375258	-1	known	p.R319C	1.000	112	0%	43	37.2%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
HAT1	8520	genome.wustl.edu	37	2	172809504	172809504	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003642.3	+1	reviewed	p.N98K	0.991	364	0%	174	38.5%	72	41.6%	benign(0)	tolerated(1)	-	superfamily_Acyl_CoA_acyltransferase,HMMPfam_Hat1_N
METAP1D	254042	genome.wustl.edu	37	2	172942555	172942555	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199227.1	+1	validated	p.V245	1.000	248	0%	136	50%	1	0%	-	-	-	HMMPfam_Peptidase_M24,superfamily_Peptidase_M24_cat_core
DLX1	1745	genome.wustl.edu	37	2	172950525	172950525	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178120.4	+1	reviewed	p.Y40	1.000	37	0%	49	51%	0	-	-	-	-	NULL
ITGA6	3655	genome.wustl.edu	37	2	173340371	173340371	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079818.1	+1	reviewed	p.I409	0.984	307	0%	153	45.8%	21	33.3%	-	-	-	HMMPfam_FG-GAP,HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
RAPGEF4	11069	genome.wustl.edu	37	2	173659858	173659858	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007023.3	+1	validated	p.L57	0.989	412	0%	143	40.6%	0	-	-	-	-	HMMSmart_SM00100,superfamily_cAMP-binding domain-like
ZAK	51776	genome.wustl.edu	37	2	173955878	173955878	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016653.2	+1	reviewed	p.K40R	1.000	141	0%	68	42.6%	7	42.8%	benign(0.351)	tolerated(0.31)	neutral(0.138)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
GPR155	151556	genome.wustl.edu	37	2	175335123	175335123	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033045.2	-1	validated	p.E341*	1.000	101	0%	58	50%	2	0%	-	-	-	HMMPfam_Mem_trans
GPR155	151556	genome.wustl.edu	37	2	175346343	175346343	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033045.2	-1	validated	p.F114L	1.000	225	0%	102	38.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Mem_trans
ENSG00000206965	0	genome.wustl.edu	37	2	175422797	175422797	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384238	-1	known	NULL	0.002	199	0.5%	44	40.9%	1	100%	-	-	-	-
WIPF1	7456	genome.wustl.edu	37	2	175437036	175437036	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077269.1	-1	reviewed	p.R166M	1.000	26	0%	20	20%	17	0%	probably_damaging(0.991)	tolerated(0.1)	deleterious(0.730)	NULL
EVX2	344191	genome.wustl.edu	37	2	176948177	176948177	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080458.1	-1	reviewed	p.A110T	1.000	12	0%	22	40.9%	0	-	benign(0)	tolerated(1)	-	NULL
HOXD13	3239	genome.wustl.edu	37	2	176958341	176958341	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000523.3	+1	reviewed	p.Q241H	1.000	6	0.000	8	0.500	0	-	benign(0.378)	deleterious(0.01)	deleterious(0.526)	NULL
HOXD11	3237	genome.wustl.edu	37	2	176973688	176973688	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021192.2	+1	reviewed	p.R279C	1.000	60	0%	37	51.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like
MIR10B	406903	genome.wustl.edu	37	2	177015087	177015087	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000385011	+1	known	NULL	0.924	185	0%	95	32.6%	0	-	-	-	-	-
HOXD3	3232	genome.wustl.edu	37	2	177036313	177036313	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006898.4	+1	reviewed	p.A204T	1.000	23	0%	24	50%	0	-	possibly_damaging(0.93)	deleterious(0)	deleterious(0.821)	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like
HOXD3	3232	genome.wustl.edu	37	2	177036975	177036975	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006898.4	+1	reviewed	p.P424	1.000	9	0.000	11	0.545	0	-	-	-	-	NULL
TTC30B	150737	genome.wustl.edu	37	2	178415661	178415661	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152517.2	-1	validated	p.E611*	1.000	390	0%	205	40.5%	7	71.4%	-	-	-	NULL
TTC30B	150737	genome.wustl.edu	37	2	178416954	178416954	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152517.2	-1	validated	p.A180T	0.996	49	0%	45	17.8%	2	50%	possibly_damaging(0.819)	deleterious(0.02)	deleterious(0.693)	HMMSmart_SM00028,superfamily_TPR-like
TTC30A	92104	genome.wustl.edu	37	2	178482542	178482542	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152275.3	-1	validated	p.M296I	1.000	63	0%	55	41.8%	4	50%	benign(0.003)	tolerated(0.65)	neutral(0.003)	superfamily_SSF48452
PDE11A	50940	genome.wustl.edu	37	2	178936253	178936253	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016953.3	-1	reviewed	p.Q304H	1.000	27	0%	18	55.6%	2	0%	benign(0.257)	deleterious(0.01)	neutral(0.432)	HMMPfam_GAF,HMMSmart_SM00065,superfamily_GAF domain-like
TTN	7273	genome.wustl.edu	37	2	179395348	179395348	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.F32762V	1.000	285	0%	135	44.4%	0	-	benign(0)	-	-	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179397318	179397318	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133378.4	-1	reviewed	p.E32107*	1.000	72	0%	55	36.4%	0	-	benign(0.252)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179399908	179399908	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.T31242A	0.999	194	0%	64	40.6%	0	-	benign(0.026)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179403847	179403847	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.T30369S	1.000	215	0%	65	13.8%	7	14.2%	possibly_damaging(0.804)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179404950	179404950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.T30078N	1.000	422	0%	129	41.9%	2	50%	probably_damaging(0.974)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179408335	179408335	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.V29552A	1.000	111	0%	41	34.1%	6	66.6%	benign(0.266)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179413213	179413213	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.R28477Q	1.000	37	0%	23	34.8%	1	100%	probably_damaging(0.995)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179421791	179421791	+	Missense_Mutation	SNP	C	C	A	rs183013408	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.G26794C	1.000	114	0%	30	36.7%	0	-	probably_damaging(1)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179429983	179429983	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.G24389D	1.000	203	0%	51	56.9%	0	-	probably_damaging(0.998)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179431579	179431579	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.D23857G	1.000	42	0%	18	38.9%	0	-	possibly_damaging(0.888)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179434059	179434059	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133378.4	-1	reviewed	p.T23032I	0.998	140	0%	50	28%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179436430	179436430	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.G22240E	0.997	134	0%	51	56.9%	0	-	probably_damaging(1)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179437060	179437060	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.G22030D	1.000	109	0%	44	54.5%	0	-	probably_damaging(1)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179437141	179437141	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.C22003Y	1.000	180	0.6%	53	52.8%	2	100%	probably_damaging(0.997)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179439855	179439855	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.K21098N	0.966	113	0%	41	39%	0	-	possibly_damaging(0.928)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179441340	179441340	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.E20641K	1.000	170	0%	70	32.9%	5	80%	possibly_damaging(0.789)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179443598	179443598	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.A20150V	1.000	83	0%	38	52.6%	1	0%	possibly_damaging(0.612)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179451259	179451259	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.G18887*	1.000	88	0%	33	42.4%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179458071	179458071	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.S17052P	1.000	190	0%	40	47.5%	0	-	possibly_damaging(0.539)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179458352	179458352	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.L16989	1.000	217	0%	60	26.7%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179468771	179468771	+	Missense_Mutation	SNP	G	G	A	rs187167219	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.R15647C	1.000	109	0%	48	47.9%	0	-	possibly_damaging(0.737)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179469898	179469898	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.K15434N	1.000	108	0%	26	50%	1	0%	benign(0.099)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179472399	179472399	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.V15104	1.000	170	0%	54	44.4%	0	-	-	-	-	HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179473404	179473404	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.V14877A	1.000	235	0%	45	42.2%	0	-	possibly_damaging(0.737)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179477244	179477244	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.L14102V	1.000	440	0%	108	24.1%	1	100%	benign(0.014)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179481260	179481260	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.P13518	0.116	219	0%	59	40.7%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179484366	179484366	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.A12992S	1.000	227	0%	63	47.6%	1	100%	benign(0.099)	-	-	HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179499456	179499456	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.V11481I	0.993	258	0%	95	17.9%	0	-	possibly_damaging(0.496)	-	-	HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179560665	179560665	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.D9134	0.946	674	0%	328	40.9%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179560832	179560832	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.E9079K	0.154	670	0.1%	327	46.2%	0	-	unknown(0)	deleterious(0)	-	NULL
TTN	7273	genome.wustl.edu	37	2	179567299	179567299	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.D8861	0.890	164	0%	84	35.7%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179577204	179577204	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.G7905S	1.000	146	0%	39	12.8%	0	-	unknown(0)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179588843	179588843	+	Missense_Mutation	SNP	C	C	T	rs148072021	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.R5804Q	1.000	110	0%	25	56%	0	-	unknown(0)	-	-	HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179596077	179596077	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.N4562H	1.000	141	0%	33	39.4%	0	-	unknown(0)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179600448	179600448	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356127	-1	known	p.C3665R	1.000	271	0%	87	37.9%	0	-	unknown(0)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179606596	179606596	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000342175	-1	known	p.E3617D	0.164	235	0%	50	34%	0	-	benign(0.099)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179606598	179606598	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000342175	-1	known	p.E3617K	0.284	223	0%	50	58%	0	-	possibly_damaging(0.539)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179610831	179610831	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.E5432	0.302	167	0%	21	71.4%	0	-	-	-	-	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
TTN	7273	genome.wustl.edu	37	2	179614763	179614763	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.E4122K	0.863	229	0%	43	44.2%	0	-	benign(0.003)	tolerated(0.79)	neutral(0.001)	NULL
TTN	7273	genome.wustl.edu	37	2	179615383	179615383	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.R3915Q	0.003	229	0%	39	33.3%	0	-	benign(0.002)	tolerated(0.13)	neutral(0.253)	NULL
TTN	7273	genome.wustl.edu	37	2	179616550	179616550	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.R3526I	0.131	170	0%	50	22%	0	-	benign(0.35)	tolerated(0.07)	neutral(0.430)	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
TTN	7273	genome.wustl.edu	37	2	179622314	179622314	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000359218	-1	known	p.A3499T	1.000	67	1.5%	21	66.7%	0	-	benign(0.29)	-	-	HMMSmart_SM00408,HMMSmart_SM00409
TTN	7273	genome.wustl.edu	37	2	179629332	179629332	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.E3304*	1.000	67	0%	25	32%	0	-	-	-	-	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
TTN	7273	genome.wustl.edu	37	2	179639042	179639042	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.R2317C	1.000	189	0%	78	51.3%	0	-	possibly_damaging(0.535)	-	-	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
TTN	7273	genome.wustl.edu	37	2	179640497	179640497	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.R2032G	0.604	343	0%	132	10.6%	0	-	benign(0.075)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179640648	179640648	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.R1981	1.000	213	0%	88	43.2%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179642188	179642188	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133379.3	-1	reviewed	p.R1535M	1.000	161	0%	60	11.7%	0	-	benign(0.014)	-	-	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
CCDC141	285025	genome.wustl.edu	37	2	179732751	179732751	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173648.2	-1	provisional	e5+2	1.000	84	0%	45	46.7%	0	-	-	-	-	-
SESTD1	91404	genome.wustl.edu	37	2	179988537	179988537	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178123.4	-1	validated	p.G396D	1.000	141	0%	61	34.4%	18	44.4%	possibly_damaging(0.477)	tolerated(0.56)	neutral(0.164)	NULL
ZNF385B	151126	genome.wustl.edu	37	2	180309623	180309623	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152520.4	-1	validated	p.R393W	1.000	262	0%	187	43.9%	22	9%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ZNF385B	151126	genome.wustl.edu	37	2	180634389	180634389	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152520.4	-1	validated	p.L32I	1.000	74	0%	65	43.1%	1	100%	probably_damaging(0.99)	tolerated(0.13)	deleterious(0.694)	HMMSmart_SM00451
CERKL	375298	genome.wustl.edu	37	2	182430197	182430197	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001030311.2	-1	reviewed	p.Q240*	0.000	210	0%	55	52.7%	0	-	-	-	-	HMMPfam_DAGK_cat
SSFA2	6744	genome.wustl.edu	37	2	182786708	182786708	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130445.1	+1	validated	p.K1082E	1.000	58	0%	24	54.2%	274	51.8%	probably_damaging(0.953)	deleterious(0.01)	deleterious(0.802)	NULL
PDE1A	5136	genome.wustl.edu	37	2	183104955	183104955	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005019.3	-1	validated	p.R94W	0.997	457	0.7%	245	50.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PDEase_I_N
NCKAP1	10787	genome.wustl.edu	37	2	183847630	183847630	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205842.1	-1	validated	p.S382F	1.000	175	0%	55	38.2%	101	42.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Nckap1
NCKAP1	10787	genome.wustl.edu	37	2	183859610	183859610	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205842.1	-1	validated	p.P255	1.000	363	0%	144	43.1%	95	55.7%	-	-	-	HMMPfam_Nckap1
ZNF804A	91752	genome.wustl.edu	37	2	185801937	185801937	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194250.1	+1	provisional	p.H605R	0.985	38	0%	16	62.5%	0	-	benign(0.004)	deleterious(0.01)	neutral(0.406)	NULL
FSIP2	401024	genome.wustl.edu	37	2	186670377	186670377	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000424728	+1	known	p.D5448	0.000	269	0%	57	45.6%	0	-	-	-	-	NULL
FSIP2	401024	genome.wustl.edu	37	2	186673524	186673524	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000424728	+1	known	p.F6497	0.000	95	0%	16	43.8%	0	-	-	-	-	NULL
ITGAV	3685	genome.wustl.edu	37	2	187531510	187531510	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002210.3	+1	reviewed	p.S749I	1.000	189	0%	73	39.7%	11	36.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
GULP1	51454	genome.wustl.edu	37	2	189434799	189434799	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000451191	+1	known	p.Y12C	0.838	257	0%	65	43.1%	8	87.5%	-	-	-	NULL
DIRC1	116093	genome.wustl.edu	37	2	189599579	189599579	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052952.2	-1	validated	p.K23N	0.000	134	0%	59	50.8%	0	-	unknown(0)	-	-	NULL
COL3A1	1281	genome.wustl.edu	37	2	189855058	189855058	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000090.3	+1	reviewed	p.P257H	1.000	461	0%	110	51.8%	100	3%	unknown(0)	deleterious(0.03)	-	HMMPfam_Collagen
COL3A1	1281	genome.wustl.edu	37	2	189868189	189868189	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000090.3	+1	reviewed	p.P869H	1.000	294	0%	133	36.8%	128	0.7%	unknown(0)	deleterious(0)	-	HMMPfam_Collagen
WDR75	84128	genome.wustl.edu	37	2	190327259	190327259	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032168.1	+1	provisional	p.R276	0.000	150	0%	61	14.8%	25	20%	-	-	-	HMMSmart_WD40,superfamily_WD40_like
ANKAR	150709	genome.wustl.edu	37	2	190611161	190611161	+	Silent	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144708.3	+1	validated	p.T1300	1.000	156	0%	54	24.1%	0	-	-	-	-	NULL
ANKAR	150709	genome.wustl.edu	37	2	190611212	190611212	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144708.3	+1	validated	p.K1317N	0.340	185	0%	62	48.4%	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
INPP1	3628	genome.wustl.edu	37	2	191235593	191235593	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128928.1	+1	reviewed	p.G222D	1.000	50	0%	28	53.6%	19	57.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase
MFSD6	54842	genome.wustl.edu	37	2	191301084	191301084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017694.3	+1	validated	p.R110H	0.993	118	0%	64	43.8%	6	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
TMEM194B	100131211	genome.wustl.edu	37	2	191379213	191379213	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142645.1	-1	validated	p.H307Y	0.000	41	0%	32	40.6%	4	25%	benign(0.282)	deleterious(0.05)	neutral(0.432)	HMMPfam_DUF2215
STAT1	6772	genome.wustl.edu	37	2	191859864	191859864	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007315.3	-1	reviewed	p.Y289	0.114	270	0%	107	46.7%	41	19.5%	-	-	-	HMMPfam_STAT_alpha,superfamily_STAT
STAT1	6772	genome.wustl.edu	37	2	191859931	191859931	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007315.3	-1	reviewed	p.A267V	0.999	192	0%	94	19.1%	38	13.1%	possibly_damaging(0.827)	deleterious(0)	deleterious(0.758)	HMMPfam_STAT_alpha,superfamily_STAT
STAT4	6775	genome.wustl.edu	37	2	192011431	192011431	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003151.2	-1	reviewed	p.L61	0.995	307	0%	129	31%	0	-	-	-	-	HMMPfam_STAT_int,superfamily_STAT
MYO1B	4430	genome.wustl.edu	37	2	192228519	192228519	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130158.1	+1	validated	p.A277	0.000	127	0%	37	32.4%	30	40%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO1B	4430	genome.wustl.edu	37	2	192248063	192248063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130158.1	+1	validated	p.E450K	1.000	287	0%	122	41%	26	73%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO1B	4430	genome.wustl.edu	37	2	192255135	192255135	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130158.1	+1	validated	p.A633	1.000	75	0%	33	27.3%	35	17.1%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
OBFC2A	64859	genome.wustl.edu	37	2	192548521	192548521	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031716.2	+1	validated	p.Q123H	0.998	425	0%	204	36.3%	10	0%	possibly_damaging(0.941)	deleterious(0.01)	deleterious(0.792)	NULL
SDPR	8436	genome.wustl.edu	37	2	192711197	192711197	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004657.5	-1	reviewed	p.R152H	1.000	10	0%	22	27.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SDPR	8436	genome.wustl.edu	37	2	192711274	192711274	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004657.5	-1	reviewed	p.R126	0.963	22	0%	38	47.4%	1	0%	-	-	-	NULL
SLC39A10	57181	genome.wustl.edu	37	2	196545420	196545420	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127257.1	+1	validated	p.N218	1.000	86	0%	45	15.6%	12	0%	-	-	-	NULL
SLC39A10	57181	genome.wustl.edu	37	2	196599650	196599650	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127257.1	+1	validated	p.G794D	1.000	316	0%	170	42.9%	16	31.2%	benign(0.039)	deleterious(0.03)	neutral(0.366)	HMMPfam_Zip
DNAH7	56171	genome.wustl.edu	37	2	196642627	196642627	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018897.2	-1	validated	p.T3654M	1.000	166	0%	84	39.3%	1	0%	possibly_damaging(0.925)	deleterious(0.02)	deleterious(0.756)	HMMPfam_Dynein_heavy
DNAH7	56171	genome.wustl.edu	37	2	196673491	196673491	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018897.2	-1	validated	p.R3333Q	0.999	372	0%	127	21.3%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Dynein_heavy
DNAH7	56171	genome.wustl.edu	37	2	196726647	196726647	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018897.2	-1	validated	p.Q2510H	0.235	152	0%	71	36.6%	0	-	benign(0)	tolerated(0.15)	neutral(0.241)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH7	56171	genome.wustl.edu	37	2	196749333	196749333	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018897.2	-1	validated	p.I1913M	0.997	235	0.4%	102	49%	0	-	benign(0.404)	deleterious(0)	deleterious(0.575)	NULL
HECW2	57520	genome.wustl.edu	37	2	197080668	197080668	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020760.1	-1	provisional	p.G1510R	1.000	148	0.7%	58	51.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
HECW2	57520	genome.wustl.edu	37	2	197086997	197086997	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020760.1	-1	provisional	p.D1362N	1.000	119	0%	51	49%	2	0%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
HECW2	57520	genome.wustl.edu	37	2	197105187	197105187	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020760.1	-1	provisional	p.F1250	0.977	325	0%	138	38.4%	3	0%	-	-	-	HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
HECW2	57520	genome.wustl.edu	37	2	197183832	197183832	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020760.1	-1	provisional	p.A594	0.001	25	0%	23	47.8%	0	-	-	-	-	NULL
GTF3C3	9330	genome.wustl.edu	37	2	197636654	197636654	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012086.2	-1	provisional	p.V693A	1.000	154	0%	87	49.4%	25	60%	benign(0.196)	deleterious(0.02)	neutral(0.402)	superfamily_TPR-like
PGAP1	80055	genome.wustl.edu	37	2	197781163	197781163	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024989.3	-1	validated	p.K152N	1.000	218	0%	88	51.1%	2	50%	benign(0.361)	tolerated(0.18)	neutral(0.171)	HMMPfam_PGAP1,superfamily_alpha/beta-Hydrolases
ANKRD44	91526	genome.wustl.edu	37	2	197866551	197866551	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153697.1	-1	provisional	p.C762	1.000	300	0%	107	23.4%	3	0%	-	-	-	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
SF3B1	23451	genome.wustl.edu	37	2	198285114	198285114	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000487698	-1	known	p.I151M	0.999	172	0%	94	53.2%	10	40%	benign(0.001)	deleterious(0.02)	neutral(0.383)	NULL
SF3B1	23451	genome.wustl.edu	37	2	198285841	198285841	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012433.2	-1	reviewed	p.S71L	1.000	171	0%	95	36.8%	109	50.4%	possibly_damaging(0.626)	tolerated(0.22)	neutral(0.260)	NULL
COQ10B	80219	genome.wustl.edu	37	2	198324780	198324780	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025147.3	+1	provisional	p.E77*	1.000	307	0.3%	128	41.4%	9	22.2%	-	-	-	NULL
HSPE1	3336	genome.wustl.edu	37	2	198367769	198367769	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002157.2	+1	reviewed	p.E59K	1.000	476	0%	346	12.4%	770	16.3%	benign(0)	tolerated(0.82)	neutral(0.001)	HMMPfam_Cpn10,superfamily_GroES-like
RFTN2	130132	genome.wustl.edu	37	2	198508980	198508980	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144629.2	-1	validated	p.A114T	0.523	356	0%	182	51.1%	0	-	benign(0.016)	tolerated(0.92)	neutral(0.001)	NULL
MARS2	92935	genome.wustl.edu	37	2	198571806	198571806	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138395.2	+1	validated	p.G559	0.879	42	0%	38	47.4%	10	70%	-	-	-	superfamily_tRNAsyn_1a_bind
PLCL1	5334	genome.wustl.edu	37	2	198949647	198949647	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006226.3	+1	validated	p.R371Q	0.993	173	0%	59	37.3%	0	-	benign(0.056)	tolerated(0.23)	neutral(0.045)	HMMPfam_PI-PLC-X,HMMSmart_PLCXc,superfamily_PLC-like_Pdiesterase_TIM-brl
PLCL1	5334	genome.wustl.edu	37	2	198950055	198950055	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006226.3	+1	validated	p.K507T	1.000	112	0%	59	13.6%	0	-	benign(0.001)	tolerated(0.37)	neutral(0.019)	HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_PLC-like_Pdiesterase_TIM-brl
SATB2	23314	genome.wustl.edu	37	2	200137387	200137387	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015265.3	-1	reviewed	p.H583	0.302	44	0%	30	43.3%	4	25%	-	-	-	NULL
SPATS2L	26010	genome.wustl.edu	37	2	201334702	201334702	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100422.1	+1	validated	p.I341	0.999	96	0%	79	60.8%	43	53.4%	-	-	-	HMMPfam_DUF1387
SPATS2L	26010	genome.wustl.edu	37	2	201342362	201342362	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100422.1	+1	validated	p.G429R	1.000	109	0%	58	51.7%	44	27.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SGOL2	151246	genome.wustl.edu	37	2	201436742	201436742	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152524.5	+1	validated	p.I558S	0.003	115	0%	40	45%	1	100%	benign(0.244)	tolerated(0.21)	neutral(0.069)	NULL
SGOL2	151246	genome.wustl.edu	37	2	201437877	201437877	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152524.5	+1	validated	p.S936R	0.004	59	0%	14	50%	5	40%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
AOX1	316	genome.wustl.edu	37	2	201480751	201480751	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001159.3	+1	reviewed	p.H557N	0.003	339	0%	122	47.5%	0	-	benign(0.02)	tolerated(0.36)	neutral(0.021)	superfamily_CO dehydrogenase molybdoprotein N-domain-like
AOX1	316	genome.wustl.edu	37	2	201499608	201499608	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001159.3	+1	reviewed	p.Y772	0.961	198	0%	52	34.6%	2	0%	-	-	-	HMMPfam_Ald_Xan_dh_C2,superfamily_Molybdenum cofactor-binding domain
AOX1	316	genome.wustl.edu	37	2	201507473	201507473	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001159.3	+1	reviewed	p.T932	0.685	82	0%	38	36.8%	1	100%	-	-	-	HMMPfam_Ald_Xan_dh_C2,superfamily_Molybdenum cofactor-binding domain
AOX1	316	genome.wustl.edu	37	2	201523952	201523952	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001159.3	+1	reviewed	p.T1079I	1.000	98	0%	51	54.9%	0	-	probably_damaging(0.974)	deleterious(0.02)	deleterious(0.799)	HMMPfam_Ald_Xan_dh_C2,superfamily_Molybdenum cofactor-binding domain
AOX1	316	genome.wustl.edu	37	2	201524748	201524748	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001159.3	+1	reviewed	p.E1111K	0.909	279	0%	85	12.9%	2	50%	benign(0.004)	tolerated(0.28)	neutral(0.032)	HMMPfam_Ald_Xan_dh_C2,superfamily_Molybdenum cofactor-binding domain
BZW1	9689	genome.wustl.edu	37	2	201683615	201683615	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000359893	+1	known	p.S69N	1.000	100	0%	67	49.3%	62	50%	-	-	-	HMMPfam_W2,HMMSmart_SM00515,superfamily_ARM repeat
ENSG00000207116	0	genome.wustl.edu	37	2	201694753	201694753	+	RNA	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384388	+1	novel	NULL	0.003	189	0%	89	14.6%	1	0%	-	-	-	-
CLK1	1195	genome.wustl.edu	37	2	201718641	201718641	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004071.3	-1	reviewed	p.R432	0.998	143	0%	50	50%	45	42.2%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
FAM126B	285172	genome.wustl.edu	37	2	201862215	201862215	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173822.3	-1	validated	p.V193	1.000	181	0%	79	13.9%	2	100%	-	-	-	HMMPfam_Hyccin
CASP8	841	genome.wustl.edu	37	2	202131315	202131315	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080125.1	+1	reviewed	p.E95*	1.000	120	0%	70	37.1%	5	60%	-	-	-	HMMPfam_DED,HMMSmart_SM00031,superfamily_DEATH domain
TRAK2	66008	genome.wustl.edu	37	2	202257694	202257694	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015049.2	-1	validated	p.R351C	1.000	400	0%	125	49.6%	10	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HAP1_N
ALS2CR11	151254	genome.wustl.edu	37	2	202356525	202356525	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000439140	-1	known	p.Q1513	0.018	402	0%	225	47.1%	0	-	-	-	-	NULL
ALS2CR11	151254	genome.wustl.edu	37	2	202357560	202357560	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000439140	-1	known	p.G1168	0.993	93	0%	39	51.3%	0	-	-	-	-	NULL
ALS2CR11	151254	genome.wustl.edu	37	2	202358276	202358276	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000439140	-1	known	p.I930L	0.982	163	0%	69	55.1%	0	-	possibly_damaging(0.568)	-	-	NULL
ALS2CR11	151254	genome.wustl.edu	37	2	202469389	202469389	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152525.5	-1	validated	p.S88I	0.086	489	0%	196	41.8%	0	-	possibly_damaging(0.852)	deleterious(0.01)	deleterious(0.733)	NULL
CDK15	65061	genome.wustl.edu	37	2	202672677	202672677	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139158.1	+1	provisional	e2+2	1.000	103	0%	65	41.5%	0	-	-	-	-	-
CDK15	65061	genome.wustl.edu	37	2	202700373	202700373	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139158.1	+1	provisional	p.A195	1.000	60	0%	30	63.3%	0	-	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
FZD7	8324	genome.wustl.edu	37	2	202900538	202900538	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003507.1	+1	reviewed	p.A390T	1.000	13	0%	18	50%	16	31.2%	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMPfam_Frizzled
BMPR2	659	genome.wustl.edu	37	2	203242263	203242263	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001204.6	+1	reviewed	p.S22	1.000	37	0%	35	45.7%	5	80%	-	-	-	NULL
BMPR2	659	genome.wustl.edu	37	2	203383555	203383555	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001204.6	+1	reviewed	p.R211Q	1.000	138	0%	113	48.7%	19	78.9%	benign(0.107)	tolerated(1)	neutral(0.009)	superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
BMPR2	659	genome.wustl.edu	37	2	203384858	203384858	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001204.6	+1	reviewed	p.S301A	1.000	270	0%	143	46.9%	12	41.6%	benign(0.273)	tolerated(0.09)	neutral(0.326)	superfamily_Kinase_like,HMMPfam_Pkinase
BMPR2	659	genome.wustl.edu	37	2	203420619	203420619	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001204.6	+1	reviewed	p.P744L	1.000	88	0%	48	27.1%	22	36.3%	probably_damaging(0.953)	deleterious(0.02)	deleterious(0.780)	NULL
ALS2CR8	79800	genome.wustl.edu	37	2	203807664	203807664	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001104586.1	+1	validated	p.S94P	0.935	121	0%	57	40.4%	1	100%	benign(0)	tolerated(0.22)	neutral(0.042)	NULL
NBEAL1	65065	genome.wustl.edu	37	2	203933115	203933115	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114132.1	+1	validated	e6-1	1.000	384	0.3%	200	43%	0	-	-	-	-	-
NBEAL1	65065	genome.wustl.edu	37	2	204034491	204034491	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114132.1	+1	validated	p.R1978*	1.000	320	0.6%	109	42.2%	2	0%	-	-	-	superfamily_BEACH domain,superfamily_PH domain-like
RAPH1	65059	genome.wustl.edu	37	2	204322267	204322267	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213589.1	-1	validated	p.E382*	1.000	570	0%	248	49.6%	3	66.6%	-	-	-	NULL
RAPH1	65059	genome.wustl.edu	37	2	204354748	204354748	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213589.1	-1	validated	p.E97	1.000	208	0%	110	12.7%	8	50%	-	-	-	NULL
CTLA4	1493	genome.wustl.edu	37	2	204736211	204736211	+	Splice_Site	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005214.3	+1	reviewed	e3+1	1.000	376	0%	170	50%	0	-	-	-	-	-
PARD3B	117583	genome.wustl.edu	37	2	206480223	206480223	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152526.4	+1	validated	p.R1040W	1.000	47	0%	36	41.7%	3	66.6%	possibly_damaging(0.915)	deleterious(0)	deleterious(0.811)	NULL
NRP2	8828	genome.wustl.edu	37	2	206548051	206548051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201266.1	+1	reviewed	p.L13F	0.999	281	0%	184	41.3%	24	50%	possibly_damaging(0.822)	deleterious(0.01)	deleterious(0.717)	NULL
INO80D	54891	genome.wustl.edu	37	2	206870221	206870221	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017759.4	-1	validated	p.A652D	1.000	67	0%	41	34.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
INO80D	54891	genome.wustl.edu	37	2	206921224	206921224	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017759.4	-1	validated	p.P221H	1.000	110	0%	87	40.2%	2	50%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	NULL
INO80D	54891	genome.wustl.edu	37	2	206927770	206927770	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017759.4	-1	validated	e1-1	1.000	139	0%	65	41.5%	0	-	-	-	-	-
NDUFS1	4719	genome.wustl.edu	37	2	207006672	207006672	+	Nonsense_Mutation	SNP	G	G	A	rs186057450	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005006.5	-1	reviewed	p.R419*	1.000	142	0%	77	44.2%	31	9.6%	-	-	-	HMMPfam_Molybdopterin,superfamily_SSF53706
NDUFS1	4719	genome.wustl.edu	37	2	207012475	207012475	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005006.5	-1	reviewed	e5+2	1.000	114	0%	73	45.2%	0	-	-	-	-	-
ZDBF2	57683	genome.wustl.edu	37	2	207171914	207171914	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020923.1	+1	validated	p.E888*	0.000	132	2.3%	44	45.5%	0	-	-	-	-	NULL
ZDBF2	57683	genome.wustl.edu	37	2	207175008	207175008	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020923.1	+1	validated	p.R1919H	0.183	71	0%	33	51.5%	0	-	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
ADAM23	8745	genome.wustl.edu	37	2	207482322	207482322	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003812.2	+1	reviewed	p.F824L	1.000	115	0%	44	36.4%	1	0%	possibly_damaging(0.643)	tolerated(0.79)	neutral(0.227)	NULL
CPO	130749	genome.wustl.edu	37	2	207827303	207827303	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173077.2	+1	validated	p.Y248H	1.000	210	0%	78	12.8%	0	-	benign(0.111)	tolerated(0.13)	neutral(0.261)	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,superfamily_SSF53187
PLEKHM3	389072	genome.wustl.edu	37	2	208773240	208773240	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080475.2	-1	validated	p.Q650*	1.000	86	0%	52	42.3%	0	-	-	-	-	NULL
PLEKHM3	389072	genome.wustl.edu	37	2	208841985	208841985	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000447645	-1	known	p.R64W	0.000	94	0%	70	48.6%	1	0%	-	-	-	NULL
CRYGC	1420	genome.wustl.edu	37	2	208994334	208994334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020989.3	-1	reviewed	p.P28L	0.998	58	0%	45	60%	0	-	benign(0.302)	tolerated(0.13)	neutral(0.346)	HMMPfam_Crystall,HMMSmart_SM00247,superfamily_gamma-Crystallin-like
IDH1	3417	genome.wustl.edu	37	2	209113152	209113152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005896.2	-1	reviewed	p.R119W	1.000	172	0%	89	40.4%	100	59%	possibly_damaging(0.819)	deleterious(0.02)	deleterious(0.693)	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like
IDH1	3417	genome.wustl.edu	37	2	209116255	209116255	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005896.2	-1	reviewed	p.G7	0.003	97	0%	68	30.9%	88	50%	-	-	-	superfamily_Isocitrate/Isopropylmalate dehydrogenase-like
PIKFYVE	200576	genome.wustl.edu	37	2	209189703	209189703	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015040.3	+1	reviewed	p.T800	0.830	294	0%	102	46.1%	6	50%	-	-	-	HMMPfam_Cpn60_TCP1,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like
PIKFYVE	200576	genome.wustl.edu	37	2	209190652	209190652	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015040.3	+1	reviewed	p.K1039	1.000	159	0%	58	39.7%	5	80%	-	-	-	NULL
MAP2	4133	genome.wustl.edu	37	2	210558460	210558460	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002374.3	+1	reviewed	p.T522	0.001	110	0%	34	11.8%	3	0%	-	-	-	HMMPfam_MAP2_projctn
UNC80	285175	genome.wustl.edu	37	2	210640615	210640615	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032504.1	+1	validated	p.S48	0.999	44	0%	26	61.5%	0	-	-	-	-	NULL
UNC80	285175	genome.wustl.edu	37	2	210678405	210678405	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032504.1	+1	validated	p.G347D	1.000	86	0%	56	16.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
UNC80	285175	genome.wustl.edu	37	2	210696271	210696271	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032504.1	+1	validated	p.R911C	1.000	97	0%	31	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
UNC80	285175	genome.wustl.edu	37	2	210696303	210696303	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032504.1	+1	validated	p.S921	0.997	77	0%	27	70.4%	0	-	-	-	-	NULL
UNC80	285175	genome.wustl.edu	37	2	210752861	210752861	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032504.1	+1	validated	p.R1387W	1.000	51	0%	28	50%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
UNC80	285175	genome.wustl.edu	37	2	210822448	210822448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032504.1	+1	validated	p.G2447V	1.000	110	0%	44	43.2%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
UNC80	285175	genome.wustl.edu	37	2	210834581	210834581	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032504.1	+1	validated	p.H2633R	1.000	159	0%	74	48.6%	0	-	probably_damaging(0.959)	tolerated(0.34)	neutral(0.426)	NULL
KANSL1L	151050	genome.wustl.edu	37	2	210887849	210887849	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152519.2	-1	validated	p.L930V	0.998	342	0%	148	41.2%	16	43.7%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
ACADL	33	genome.wustl.edu	37	2	211081232	211081232	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001608.3	-1	reviewed	p.A125	1.000	227	0%	90	46.7%	13	38.4%	-	-	-	HMMPfam_Acyl-CoA_dh_N,superfamily_AcylCoA_dehyd_NM
MYL1	4632	genome.wustl.edu	37	2	211179738	211179738	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_079420.2	-1	reviewed	p.P10H	0.987	69	0%	47	53.2%	0	-	unknown(0)	deleterious(0)	-	NULL
ERBB4	2066	genome.wustl.edu	37	2	212285330	212285330	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005235.2	-1	reviewed	p.D991N	1.000	192	0%	109	25.7%	5	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_Protein kinase-like (PK-like)
ERBB4	2066	genome.wustl.edu	37	2	212426803	212426803	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005235.2	-1	reviewed	p.I771T	1.000	61	0%	51	45.1%	5	100%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
ERBB4	2066	genome.wustl.edu	37	2	212537910	212537910	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000260943	-1	known	p.A565V	0.002	75	0%	23	43.5%	2	0%	-	-	-	HMMSmart_SM00261,superfamily_Growth factor receptor domain
ERBB4	2066	genome.wustl.edu	37	2	212543838	212543838	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005235.2	-1	reviewed	p.L521M	1.000	69	0%	42	42.9%	3	100%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMSmart_SM00261,superfamily_Growth factor receptor domain
ERBB4	2066	genome.wustl.edu	37	2	212543846	212543846	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005235.2	-1	reviewed	p.D518G	1.000	68	0%	49	46.9%	3	0%	possibly_damaging(0.475)	tolerated(0.54)	neutral(0.164)	HMMSmart_SM00261,superfamily_Growth factor receptor domain,superfamily_L domain-like
SPAG16	79582	genome.wustl.edu	37	2	215013954	215013954	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024532.3	+1	validated	p.P562S	1.000	166	0%	58	34.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00320,superfamily_WD40 repeat-like
BARD1	580	genome.wustl.edu	37	2	215609821	215609821	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000465.2	-1	reviewed	p.L625I	1.000	372	0%	157	42%	11	27.2%	possibly_damaging(0.713)	tolerated(0.08)	deleterious(0.557)	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT
ABCA12	26154	genome.wustl.edu	37	2	215855642	215855642	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173076.2	-1	reviewed	p.G1136	1.000	103	0%	70	50%	1	100%	-	-	-	NULL
ABCA12	26154	genome.wustl.edu	37	2	215914500	215914500	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173076.2	-1	reviewed	p.R181	0.950	167	0%	32	59.4%	0	-	-	-	-	NULL
ATIC	471	genome.wustl.edu	37	2	216211546	216211546	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004044.6	+1	reviewed	p.A462V	1.000	136	0%	61	42.6%	87	2.2%	possibly_damaging(0.458)	tolerated(0.09)	neutral(0.447)	HMMPfam_AICARFT_IMPCHas,HMMSmart_AICARFT_IMPCHas,superfamily_AICARFT_IMPCHas_formly
FN1	2335	genome.wustl.edu	37	2	216240400	216240400	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_212482.1	-1	reviewed	p.L1977	0.019	191	0%	85	42.4%	253	28.8%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
XRCC5	7520	genome.wustl.edu	37	2	217055059	217055059	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021141.3	+1	reviewed	e17+2	0.996	226	0.4%	95	46.3%	0	-	-	-	-	-
SMARCAL1	50485	genome.wustl.edu	37	2	217297463	217297463	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127207.1	+1	reviewed	p.R453C	1.000	18	0%	13	46.2%	14	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF2_N,HMMSmart_DEXDc,superfamily_SSF52540
RPL37A	6168	genome.wustl.edu	37	2	217364099	217364099	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000998.4	+1	reviewed	p.Y37S	1.000	78	0%	39	41%	3790	45%	benign(0.23)	deleterious(0)	neutral(0.468)	HMMPfam_Ribosomal_L37ae,superfamily_Zn-binding ribosomal proteins
TNS1	7145	genome.wustl.edu	37	2	218682756	218682756	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022648.4	-1	reviewed	p.P1329	0.433	25	0%	22	68.2%	16	43.7%	-	-	-	NULL
TNS1	7145	genome.wustl.edu	37	2	218683450	218683450	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022648.4	-1	reviewed	p.S1098N	1.000	7	0.000	17	0.471	11	27.2%	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
TNS1	7145	genome.wustl.edu	37	2	218700855	218700855	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022648.4	-1	reviewed	p.E904D	1.000	22	0%	20	35%	5	20%	benign(0.021)	tolerated(0.23)	neutral(0.043)	NULL
RUFY4	285180	genome.wustl.edu	37	2	218938091	218938091	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000374155	+1	known	p.A171V	0.988	40	0%	35	51.4%	1	0%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
GPBAR1	151306	genome.wustl.edu	37	2	219128048	219128048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077191.1	+1	reviewed	p.R201W	0.219	4	0.000	13	0.308	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
AAMP	14	genome.wustl.edu	37	2	219131258	219131258	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001087.3	-1	reviewed	p.G196D	1.000	10	0%	12	41.7%	182	47.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_WD40,superfamily_WD40_like
PNKD	25953	genome.wustl.edu	37	2	219209224	219209224	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015488.4	+1	reviewed	p.E305	1.000	42	0%	46	47.8%	17	52.9%	-	-	-	superfamily_Metallo-hydrolase/oxidoreductase
PNKD	25953	genome.wustl.edu	37	2	219209648	219209648	+	Silent	SNP	C	C	A	rs185906233	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015488.4	+1	reviewed	p.R368	1.000	9	0.000	11	0.455	9	44.4%	-	-	-	superfamily_Metallo-hydrolase/oxidoreductase
BCS1L	617	genome.wustl.edu	37	2	219526921	219526921	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000436603	+1	known	p.A1V	0.999	188	0.5%	134	12.7%	46	19.5%	unknown(0)	-	-	NULL
STK36	27148	genome.wustl.edu	37	2	219563961	219563961	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015690.3	+1	validated	p.E1232K	0.997	9	0.000	17	0.294	34	52.9%	benign(0.066)	tolerated(0.08)	neutral(0.304)	superfamily_ARM repeat
TTLL4	9654	genome.wustl.edu	37	2	219602570	219602570	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014640.4	+1	validated	p.K57N	0.979	41	0%	15	53.3%	4	25%	possibly_damaging(0.842)	deleterious(0.03)	deleterious(0.686)	NULL
TTLL4	9654	genome.wustl.edu	37	2	219617619	219617619	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014640.4	+1	validated	p.R1037H	1.000	344	0.9%	160	41.2%	18	27.7%	probably_damaging(0.967)	deleterious(0.01)	deleterious(0.815)	NULL
CYP27A1	1593	genome.wustl.edu	37	2	219677061	219677061	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000784.3	+1	reviewed	p.R188Q	0.027	47	0%	56	42.9%	9	55.5%	benign(0.354)	tolerated(0.14)	neutral(0.361)	HMMPfam_p450,superfamily_Cytochrome P450
CYP27A1	1593	genome.wustl.edu	37	2	219677656	219677656	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000784.3	+1	reviewed	p.L285R	0.999	72	0%	54	48.1%	5	0%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_p450,superfamily_Cytochrome P450
CRYBA2	1412	genome.wustl.edu	37	2	219855055	219855055	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005209.1	-1	reviewed	p.S171	0.179	24	0%	20	30%	0	-	-	-	-	HMMPfam_Crystall,HMMSmart_SM00247,superfamily_gamma-Crystallin-like
CCDC108	255101	genome.wustl.edu	37	2	219900166	219900166	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152389.2	-1	provisional	p.S128N	0.000	193	0%	139	39.6%	0	-	unknown(0)	deleterious(0.04)	-	NULL
ZFAND2B	130617	genome.wustl.edu	37	2	220072443	220072443	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138802.1	+1	provisional	p.A75V	0.994	40	2.5%	41	53.7%	21	38%	benign(0)	tolerated(0.61)	neutral(0.004)	NULL
ATG9A	79065	genome.wustl.edu	37	2	220088370	220088370	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000409033	-1	known	p.R493C	0.015	23	0%	22	50%	47	44.6%	benign(0.231)	deleterious(0)	neutral(0.468)	NULL
ANKZF1	55139	genome.wustl.edu	37	2	220097079	220097079	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042410.1	+1	validated	p.S120F	0.516	141	0%	90	45.6%	27	74%	unknown(0)	deleterious(0.05)	-	NULL
TUBA4A	7277	genome.wustl.edu	37	2	220115406	220115406	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006000.1	-1	reviewed	p.R339C	1.000	16	0%	36	38.9%	51	27.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C
TUBA4A	7277	genome.wustl.edu	37	2	220115736	220115736	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006000.1	-1	reviewed	p.R229C	1.000	95	0%	94	47.9%	49	61.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like
TUBA4A	7277	genome.wustl.edu	37	2	220116329	220116329	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006000.1	-1	reviewed	p.G111	1.000	105	0%	94	44.7%	21	19%	-	-	-	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like
TUBA4A	7277	genome.wustl.edu	37	2	220116818	220116818	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006000.1	-1	reviewed	p.D46	0.116	57	1.8%	69	50.7%	37	29.7%	-	-	-	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like
SPEG	10290	genome.wustl.edu	37	2	220309806	220309806	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000451076	+1	known	p.G97R	1.000	8	0.000	4	1.000	0	-	-	-	-	NULL
SPEG	10290	genome.wustl.edu	37	2	220346085	220346085	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005876.4	+1	validated	p.R1810Q	0.913	71	0%	50	42%	0	-	benign(0.028)	tolerated(0.2)	neutral(0.051)	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
GMPPA	29926	genome.wustl.edu	37	2	220366688	220366688	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013335.2	+1	reviewed	p.D120N	0.998	49	0%	45	28.9%	53	33.9%	benign(0.062)	tolerated(0.24)	neutral(0.041)	HMMPfam_NTP_transferase,superfamily_Nucleotide-diphospho-sugar transferases
ASIC4	55515	genome.wustl.edu	37	2	220396798	220396798	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018674.4	+1	reviewed	p.G395E	1.000	17	0%	20	55%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ASC
ASIC4	55515	genome.wustl.edu	37	2	220397649	220397649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018674.4	+1	reviewed	p.D482Y	0.999	69	0%	83	49.4%	1	100%	possibly_damaging(0.819)	tolerated(0.11)	deleterious(0.581)	HMMPfam_ASC
OBSL1	23363	genome.wustl.edu	37	2	220416329	220416329	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015311.2	-1	reviewed	p.D1869N	0.805	10	0%	17	41.2%	12	25%	possibly_damaging(0.472)	tolerated(0.59)	neutral(0.161)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
OBSL1	23363	genome.wustl.edu	37	2	220428163	220428163	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015311.2	-1	reviewed	p.V865A	1.000	16	0%	23	26.1%	164	41.4%	probably_damaging(0.979)	deleterious(0.04)	deleterious(0.771)	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
OBSL1	23363	genome.wustl.edu	37	2	220428201	220428201	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015311.2	-1	reviewed	p.F852	0.001	29	0%	31	83.9%	170	99.4%	-	-	-	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
SLC4A3	6508	genome.wustl.edu	37	2	220494904	220494904	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201574.2	+1	validated	p.R241Q	0.571	6	0.000	7	0.714	0	-	probably_damaging(0.994)	tolerated(0.38)	deleterious(0.470)	NULL
SLC4A3	6508	genome.wustl.edu	37	2	220502528	220502528	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201574.2	+1	validated	p.G948S	1.000	28	0%	25	56%	5	40%	benign(0.07)	tolerated(0.08)	neutral(0.305)	HMMPfam_HCO3_cotransp
PAX3	5077	genome.wustl.edu	37	2	223066722	223066722	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181459.2	-1	reviewed	p.S454I	1.000	135	0%	55	38.2%	0	-	benign(0.099)	deleterious(0)	neutral(0.452)	NULL
PAX3	5077	genome.wustl.edu	37	2	223066853	223066853	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181459.2	-1	reviewed	p.Y410	0.517	85	0%	29	24.1%	0	-	-	-	-	NULL
PAX3	5077	genome.wustl.edu	37	2	223084945	223084945	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181459.2	-1	reviewed	p.F363I	1.000	171	0%	53	37.7%	0	-	possibly_damaging(0.832)	deleterious(0)	deleterious(0.762)	NULL
SGPP2	130367	genome.wustl.edu	37	2	223339408	223339408	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152386.2	+1	provisional	p.D114G	0.998	350	0%	193	38.3%	21	38%	probably_damaging(0.977)	deleterious(0)	deleterious(0.863)	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase
SCG2	7857	genome.wustl.edu	37	2	224462304	224462304	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003469.3	-1	reviewed	p.S566I	0.973	189	0%	115	43.5%	0	-	possibly_damaging(0.915)	deleterious(0.01)	deleterious(0.772)	HMMPfam_Granin
WDFY1	57590	genome.wustl.edu	37	2	224746674	224746674	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020830.3	-1	reviewed	p.S350F	1.000	165	0%	66	37.9%	23	26%	benign(0.372)	deleterious(0.03)	deleterious(0.483)	HMMPfam_FYVE,HMMSmart_SM00064,superfamily_FYVE/PHD zinc finger,superfamily_WD40 repeat-like
SERPINE2	5270	genome.wustl.edu	37	2	224862930	224862930	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136530.1	-1	validated	p.N142S	1.000	166	0%	103	45.6%	41	56%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
SERPINE2	5270	genome.wustl.edu	37	2	224866484	224866484	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136530.1	-1	validated	p.S57L	0.150	81	0%	48	52.1%	25	52%	benign(0.196)	deleterious(0.02)	neutral(0.402)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
CUL3	8452	genome.wustl.edu	37	2	225346644	225346644	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003590.3	-1	validated	p.F665Y	1.000	526	0%	177	45.8%	72	41.6%	benign(0.396)	tolerated(0.09)	neutral(0.423)	HMMPfam_Cullin,superfamily_Cullin homology domain
CUL3	8452	genome.wustl.edu	37	2	225370832	225370832	+	Missense_Mutation	SNP	C	C	A	rs17408251	byCluster	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003590.3	-1	validated	p.K349N	1.000	162	0.6%	63	44.4%	45	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cullin,superfamily_Cullin repeat
CUL3	8452	genome.wustl.edu	37	2	225379337	225379337	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003590.3	-1	validated	p.V177	0.997	314	0%	170	41.8%	34	32.3%	-	-	-	HMMPfam_Cullin,superfamily_Cullin repeat
DOCK10	55619	genome.wustl.edu	37	2	225669928	225669928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014689.2	-1	validated	p.S1349L	1.000	140	0%	34	47.1%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
IRS1	3667	genome.wustl.edu	37	2	227662473	227662473	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005544.2	-1	reviewed	p.A328T	0.997	9	0.000	10	0.500	10	30%	benign(0.2)	tolerated(1)	neutral(0.019)	NULL
COL4A4	1286	genome.wustl.edu	37	2	227967860	227967860	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000092.4	-1	reviewed	p.K290N	1.000	93	0%	40	45%	0	-	probably_damaging(0.962)	tolerated(0.4)	neutral(0.421)	NULL
COL4A3	1285	genome.wustl.edu	37	2	228173982	228173982	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000091.3	+1	reviewed	p.P1568H	1.000	101	0%	48	43.8%	0	-	unknown(0)	deleterious(0)	-	HMMPfam_C4,HMMSmart_SM00111,superfamily_C-type lectin-like
WDR69	164781	genome.wustl.edu	37	2	228783505	228783505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178821.1	+1	provisional	p.R328I	1.000	230	0%	98	43.9%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
SPHKAP	80309	genome.wustl.edu	37	2	228846557	228846557	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142644.1	-1	validated	p.L1660P	1.000	71	0%	20	65%	0	-	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	HMMPfam_AKAP_110
SPHKAP	80309	genome.wustl.edu	37	2	228881235	228881235	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142644.1	-1	validated	p.P1445	0.000	92	0%	51	49%	0	-	-	-	-	NULL
SPHKAP	80309	genome.wustl.edu	37	2	228881784	228881784	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142644.1	-1	validated	p.G1262	0.997	26	0%	21	57.1%	0	-	-	-	-	NULL
SPHKAP	80309	genome.wustl.edu	37	2	228881883	228881883	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142644.1	-1	validated	p.R1229	0.898	8	0.000	15	0.267	0	-	-	-	-	NULL
SPHKAP	80309	genome.wustl.edu	37	2	228882999	228882999	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142644.1	-1	validated	p.S857	0.000	139	0%	91	37.4%	0	-	-	-	-	NULL
DNER	92737	genome.wustl.edu	37	2	230231694	230231694	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139072.3	-1	validated	p.R666H	1.000	26	0%	24	16.7%	1	0%	benign(0.093)	deleterious(0)	neutral(0.452)	NULL
DNER	92737	genome.wustl.edu	37	2	230253101	230253101	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139072.3	-1	validated	p.D579N	1.000	47	0%	18	55.6%	1	0%	benign(0.275)	tolerated(0.26)	neutral(0.064)	HMMSmart_EGF,superfamily_SSF57196
TRIP12	9320	genome.wustl.edu	37	2	230632389	230632389	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004238.1	-1	provisional	p.P1954S	1.000	277	0%	117	41%	89	50.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
TRIP12	9320	genome.wustl.edu	37	2	230632422	230632422	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004238.1	-1	provisional	p.F1943L	1.000	278	0%	120	45%	92	40.2%	benign(0.061)	tolerated(0.75)	neutral(0.005)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
TRIP12	9320	genome.wustl.edu	37	2	230693987	230693987	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004238.1	-1	provisional	p.G410S	1.000	154	0%	54	61.1%	33	48.4%	probably_damaging(0.999)	tolerated(0.12)	deleterious(0.751)	NULL
SLC16A14	151473	genome.wustl.edu	37	2	230911237	230911237	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152527.4	-1	validated	p.L202P	1.000	24	0%	24	45.8%	13	38.4%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SP140	11262	genome.wustl.edu	37	2	231118044	231118044	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007237.4	+1	validated	p.S357	0.012	389	0%	113	36.3%	0	-	-	-	-	NULL
SP100	6672	genome.wustl.edu	37	2	231406036	231406036	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000431952	+1	known	p.E158K	0.994	274	0.4%	87	44.8%	1	0%	-	-	-	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain
SP100	6672	genome.wustl.edu	37	2	231407615	231407615	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080391.1	+1	validated	p.I871S	0.666	343	0%	83	41%	1	0%	possibly_damaging(0.67)	deleterious(0.01)	deleterious(0.643)	HMMSmart_SM00297,superfamily_Bromodomain
HTR2B	3357	genome.wustl.edu	37	2	231988275	231988275	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000867.4	-1	validated	p.T68	0.976	307	0%	122	24.6%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
LINC00471	151477	genome.wustl.edu	37	2	232373953	232373953	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024079.1	-1	predicted	NULL	0.001	279	0%	177	45.2%	0	-	-	-	-	-
DIS3L2	129563	genome.wustl.edu	37	2	233195482	233195482	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152383.4	+1	validated	p.M669R	1.000	43	2.3%	43	39.5%	21	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RNB
ALPP	250	genome.wustl.edu	37	2	233244269	233244269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001632.3	+1	reviewed	p.T119M	0.997	13	0%	26	42.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Alk_phosphatase,HMMSmart_alkPPc,superfamily_Alkaline_phosphatase_core,PatternScan_ALKALINE_PHOSPHATASE
ALPP	250	genome.wustl.edu	37	2	233244997	233244997	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001632.3	+1	reviewed	p.K253	0.510	52	0%	45	15.6%	1	0%	-	-	-	HMMPfam_Alk_phosphatase,HMMSmart_alkPPc,superfamily_Alkaline_phosphatase_core
ALPPL2	251	genome.wustl.edu	37	2	233272321	233272321	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031313.2	+1	reviewed	p.K106	1.000	11	0%	19	52.6%	0	-	-	-	-	HMMPfam_Alk_phosphatase,HMMSmart_alkPPc,superfamily_Alkaline_phosphatase_core
ALPI	248	genome.wustl.edu	37	2	233321171	233321171	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001631.3	+1	reviewed	p.G60	0.002	25	0%	29	51.7%	0	-	-	-	-	HMMPfam_Alk_phosphatase,HMMSmart_SM00098,superfamily_Alkaline phosphatase-like
ALPI	248	genome.wustl.edu	37	2	233322798	233322798	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001631.3	+1	reviewed	p.R316H	0.000	46	0%	68	36.8%	0	-	benign(0.018)	tolerated(0.17)	neutral(0.059)	HMMPfam_Alk_phosphatase,HMMSmart_SM00098,superfamily_Alkaline phosphatase-like
ALPI	248	genome.wustl.edu	37	2	233322929	233322929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001631.3	+1	reviewed	p.G332S	1.000	23	0%	37	48.6%	0	-	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	HMMPfam_Alk_phosphatase,HMMSmart_SM00098,superfamily_Alkaline phosphatase-like
CHRND	1144	genome.wustl.edu	37	2	233394809	233394809	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441621	+1	known	p.L224F	1.000	69	0%	57	14%	0	-	unknown(0)	-	-	NULL
CHRNG	1146	genome.wustl.edu	37	2	233409159	233409159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005199.4	+1	reviewed	p.R373Q	0.000	17	0%	11	72.7%	0	-	benign(0.026)	tolerated(0.51)	neutral(0.010)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
EFHD1	80303	genome.wustl.edu	37	2	233546354	233546354	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025202.3	+1	validated	p.E215D	0.989	46	0%	35	54.3%	5	20%	possibly_damaging(0.708)	tolerated(0.18)	neutral(0.311)	NULL
GIGYF2	26058	genome.wustl.edu	37	2	233625223	233625223	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001103147.1	+1	reviewed	p.R138I	1.000	618	0%	298	38.6%	16	56.2%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
SAG	6295	genome.wustl.edu	37	2	234227486	234227486	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000415974	+1	known	p.D76N	0.001	322	0%	235	41.3%	0	-	unknown(0)	deleterious(0.01)	-	NULL
DGKD	8527	genome.wustl.edu	37	2	234343074	234343074	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152879.2	+1	reviewed	p.E133*	1.000	287	0%	172	49.4%	12	33.3%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
DGKD	8527	genome.wustl.edu	37	2	234344500	234344500	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152879.2	+1	reviewed	p.R208H	1.000	28	0%	42	52.4%	11	9%	probably_damaging(0.98)	deleterious(0.01)	deleterious(0.830)	HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_Cysteine-rich domain
USP40	55230	genome.wustl.edu	37	2	234394540	234394540	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018218.2	-1	validated	p.A1105V	0.005	15	0%	20	60%	9	44.4%	benign(0.059)	deleterious(0)	neutral(0.449)	NULL
USP40	55230	genome.wustl.edu	37	2	234399885	234399885	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000430158	-1	known	p.R155H	0.000	35	0%	18	33.3%	10	10%	-	-	-	NULL
USP40	55230	genome.wustl.edu	37	2	234442252	234442252	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018218.2	-1	validated	p.H459Q	1.000	464	0%	161	43.5%	6	50%	benign(0.275)	deleterious(0)	deleterious(0.474)	HMMPfam_UCH,superfamily_Cysteine proteinases
UGT1A6	54578	genome.wustl.edu	37	2	234601779	234601779	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001072.3	+1	reviewed	p.K43N	0.977	69	0%	40	45%	0	-	possibly_damaging(0.562)	tolerated(0.06)	deleterious(0.514)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
HJURP	55355	genome.wustl.edu	37	2	234749873	234749873	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018410.3	-1	validated	p.S518I	0.000	251	0%	184	38.6%	24	54.1%	probably_damaging(0.965)	deleterious(0.01)	deleterious(0.812)	NULL
TRPM8	79054	genome.wustl.edu	37	2	234854661	234854661	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024080.4	+1	validated	p.E287	1.000	74	0%	33	30.3%	0	-	-	-	-	NULL
TRPM8	79054	genome.wustl.edu	37	2	234869688	234869688	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024080.4	+1	validated	p.D544G	0.984	62	0%	39	48.7%	1	100%	benign(0.056)	tolerated(0.38)	neutral(0.021)	NULL
ASB18	401036	genome.wustl.edu	37	2	237103670	237103670	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_212556.2	-1	provisional	p.A416T	0.000	55	0%	31	32.3%	0	-	possibly_damaging(0.901)	tolerated(0.28)	neutral(0.388)	NULL
IQCA1	79781	genome.wustl.edu	37	2	237276882	237276882	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024726.3	-1	provisional	p.L542M	0.949	54	0%	36	47.2%	0	-	benign(0.005)	tolerated(0.22)	neutral(0.042)	superfamily_P-loop containing nucleoside triphosphate hydrolases
COL6A3	1293	genome.wustl.edu	37	2	238234251	238234251	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004369.3	-1	reviewed	p.E3149K	0.659	417	0%	186	47.3%	70	0%	unknown(0)	-	-	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like
COL6A3	1293	genome.wustl.edu	37	2	238242185	238242185	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004369.3	-1	reviewed	p.S3079Y	0.008	132	0%	75	46.7%	54	0%	unknown(0)	-	-	NULL
COL6A3	1293	genome.wustl.edu	37	2	238243485	238243485	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004369.3	-1	reviewed	p.A3005T	0.998	55	0%	45	42.2%	43	0%	unknown(0)	-	-	superfamily_Fibronectin type III
COL6A3	1293	genome.wustl.edu	37	2	238249704	238249704	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004369.3	-1	reviewed	p.D2619N	1.000	33	0%	33	39.4%	45	0%	probably_damaging(1)	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
COL6A3	1293	genome.wustl.edu	37	2	238275470	238275470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004369.3	-1	reviewed	p.G1787E	0.004	37	0%	38	42.1%	27	0%	unknown(0)	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
COL6A3	1293	genome.wustl.edu	37	2	238280468	238280468	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004369.3	-1	reviewed	p.P1398S	0.999	35	0%	30	46.7%	32	3.1%	probably_damaging(1)	tolerated(0.61)	deleterious(0.504)	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
COL6A3	1293	genome.wustl.edu	37	2	238289734	238289734	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004369.3	-1	reviewed	p.R574I	0.305	26	0%	13	69.2%	13	0%	probably_damaging(0.986)	tolerated(0.14)	deleterious(0.684)	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
MLPH	79083	genome.wustl.edu	37	2	238449009	238449009	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024101.5	+1	reviewed	p.R375C	0.003	23	0%	27	59.3%	12	66.6%	possibly_damaging(0.937)	deleterious(0.02)	deleterious(0.766)	NULL
LRRFIP1	9208	genome.wustl.edu	37	2	238647880	238647880	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001137550.1	+1	validated	p.S187	0.998	25	0%	16	50%	0	-	-	-	-	HMMPfam_DUF2051
LRRFIP1	9208	genome.wustl.edu	37	2	238672066	238672066	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001137552.1	+1	validated	p.K570	1.000	112	0%	73	41.1%	21	57.1%	-	-	-	NULL
LRRFIP1	9208	genome.wustl.edu	37	2	238672109	238672109	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001137552.1	+1	validated	p.V585I	0.002	167	0%	106	43.4%	18	44.4%	possibly_damaging(0.882)	deleterious(0.03)	deleterious(0.709)	NULL
SCLY	51540	genome.wustl.edu	37	2	238991733	238991733	+	Silent	SNP	C	C	T	rs2243417	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000431487	+1	known	p.C138	0.000	46	0%	37	40.5%	1	0%	unknown(0)	deleterious(0.02)	-	NULL
PER2	8864	genome.wustl.edu	37	2	239170883	239170883	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022817.2	-1	reviewed	p.N419S	1.000	90	0%	53	35.8%	8	37.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PAS_3,superfamily_PYP-like sensor domain (PAS domain)
ASB1	51665	genome.wustl.edu	37	2	239353134	239353134	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040445.1	+1	reviewed	p.A216T	1.000	27	0%	30	23.3%	16	81.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
HDAC4	9759	genome.wustl.edu	37	2	240005918	240005918	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006037.3	-1	reviewed	p.S817Y	1.000	11	0%	13	46.2%	11	45.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hist_deacetyl,superfamily_Arginase/deacetylase
HDAC4	9759	genome.wustl.edu	37	2	240066293	240066293	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006037.3	-1	reviewed	p.P284L	0.998	52	0%	47	10.6%	7	14.2%	possibly_damaging(0.805)	tolerated(0.41)	neutral(0.318)	NULL
HDAC4	9759	genome.wustl.edu	37	2	240066379	240066379	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006037.3	-1	reviewed	p.R255	1.000	61	0%	43	23.3%	7	14.2%	-	-	-	NULL
ENSG00000196758	0	genome.wustl.edu	37	2	240500416	240500416	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000358775	+1	known	p.S99	0.000	60	0%	64	39.1%	0	-	-	-	-	NULL
OR6B2	389090	genome.wustl.edu	37	2	240969149	240969149	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005853.1	-1	provisional	p.G233D	0.079	83	0%	65	44.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PRR21	643905	genome.wustl.edu	37	2	240981403	240981403	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080835.1	-1	provisional	p.R333W	0.000	211	0%	218	44%	0	-	possibly_damaging(0.737)	tolerated(0.05)	deleterious(0.615)	NULL
OR6B3	150681	genome.wustl.edu	37	2	240984596	240984596	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173351.1	-1	provisional	p.K298N	0.010	118	0%	67	47.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_SSF81321
MYEOV2	150678	genome.wustl.edu	37	2	241066179	241066179	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138336.1	-1	validated	p.R187Q	0.000	419	0.2%	300	15%	0	-	unknown(0)	-	-	NULL
MYEOV2	150678	genome.wustl.edu	37	2	241073419	241073419	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138336.1	-1	validated	p.G54*	0.999	110	0%	101	11.9%	171	8.7%	-	-	-	NULL
ANKMY1	51281	genome.wustl.edu	37	2	241452263	241452263	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016552.2	-1	validated	p.D612N	0.967	29	0%	24	25%	7	14.2%	probably_damaging(0.999)	tolerated(0.8)	deleterious(0.491)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
RNPEPL1	57140	genome.wustl.edu	37	2	241513741	241513741	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018226.3	+1	provisional	p.R153C	1.000	8	0.000	11	0.455	90	47.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M1,superfamily_SSF55486
KIF1A	547	genome.wustl.edu	37	2	241660449	241660449	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004321.4	-1	reviewed	p.E1483K	1.000	15	0%	14	35.7%	0	-	possibly_damaging(0.806)	tolerated(0.19)	neutral(0.353)	NULL
AGXT	189	genome.wustl.edu	37	2	241815400	241815400	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000030.2	+1	reviewed	p.S275R	0.999	36	0%	31	35.5%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Aminotran_5,superfamily_PLP-dependent transferases
SNED1	25992	genome.wustl.edu	37	2	241969869	241969869	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080437.1	+1	provisional	p.R128C	0.424	31	0%	41	29.3%	3	66.6%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMSmart_SM00539
SNED1	25992	genome.wustl.edu	37	2	242004357	242004357	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080437.1	+1	provisional	p.G899	0.997	14	0%	11	45.5%	1	0%	-	-	-	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin
PASK	23178	genome.wustl.edu	37	2	242051742	242051742	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015148.2	-1	validated	p.S1149L	0.999	47	0%	33	42.4%	14	28.5%	probably_damaging(1)	tolerated(0.12)	deleterious(0.760)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PASK	23178	genome.wustl.edu	37	2	242051816	242051816	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015148.2	-1	validated	p.I1124	0.980	74	0%	49	40.8%	10	30%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PASK	23178	genome.wustl.edu	37	2	242054745	242054745	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015148.2	-1	validated	p.E1052D	1.000	176	0%	112	49.1%	7	42.8%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ANO7	50636	genome.wustl.edu	37	2	242144365	242144365	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001891.3	+1	validated	p.I379M	0.083	34	0%	44	47.7%	0	-	benign(0.022)	tolerated(0.14)	neutral(0.251)	NULL
HDLBP	3069	genome.wustl.edu	37	2	242189381	242189381	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005336.3	-1	validated	p.D463Y	1.000	55	0%	41	43.9%	250	26.4%	possibly_damaging(0.626)	deleterious(0)	deleterious(0.662)	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791
HDLBP	3069	genome.wustl.edu	37	2	242192416	242192416	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005336.3	-1	validated	p.D443G	1.000	66	0%	49	42.9%	181	21.5%	probably_damaging(0.988)	tolerated(0.08)	deleterious(0.738)	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791
HDLBP	3069	genome.wustl.edu	37	2	242194839	242194839	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005336.3	-1	validated	p.R344*	0.986	104	0%	74	36.5%	120	3.3%	-	-	-	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791
HDLBP	3069	genome.wustl.edu	37	2	242196185	242196185	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005336.3	-1	validated	p.R163C	1.000	408	0.2%	290	51.7%	161	26.7%	possibly_damaging(0.9)	deleterious(0)	deleterious(0.801)	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791
FARP2	9855	genome.wustl.edu	37	2	242402790	242402790	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000422951	+1	known	p.R14*	0.301	56	0%	37	51.4%	8	37.5%	benign(0.429)	deleterious(0.01)	deleterious(0.545)	superfamily_DBL homology domain (DH-domain)
FARP2	9855	genome.wustl.edu	37	2	242403360	242403360	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014808.2	+1	validated	p.G620R	1.000	81	0%	78	37.2%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
ATG4B	23192	genome.wustl.edu	37	2	242590697	242590697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013325.4	+1	reviewed	p.S44Y	0.994	347	0%	223	48.4%	40	47.5%	possibly_damaging(0.628)	deleterious(0.01)	deleterious(0.625)	HMMPfam_Peptidase_C54
ATG4B	23192	genome.wustl.edu	37	2	242606097	242606097	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013325.4	+1	reviewed	p.A192	0.000	13	0%	14	28.6%	85	41.1%	-	-	-	HMMPfam_Peptidase_C54
PDCD1	5133	genome.wustl.edu	37	2	242794104	242794104	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000343705	-1	known	p.P100T	0.051	18	0%	19	52.6%	1	0%	-	-	-	NULL
CHL1	10752	genome.wustl.edu	37	3	402102	402102	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006614.2	+1	reviewed	p.V434A	0.711	192	0%	85	49.4%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMSmart_SM00409,superfamily_Immunoglobulin
CHL1	10752	genome.wustl.edu	37	3	423894	423894	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006614.2	+1	reviewed	p.S637T	1.000	165	0%	58	51.7%	0	-	possibly_damaging(0.93)	tolerated(1)	neutral(0.377)	HMMSmart_SM00060,superfamily_Fibronectin type III
CNTN6	27255	genome.wustl.edu	37	3	1371511	1371511	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014461.2	+1	reviewed	p.S419Y	0.427	397	0%	73	38.4%	0	-	possibly_damaging(0.463)	deleterious(0.01)	deleterious(0.557)	HMMPfam_I-set,superfamily_SSF48726
CNTN4	152330	genome.wustl.edu	37	3	3097837	3097837	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175607.1	+1	reviewed	p.S1005L	0.990	190	0%	84	33.3%	0	-	benign(0)	tolerated(0.24)	neutral(0.037)	NULL
IL5RA	3568	genome.wustl.edu	37	3	3137048	3137048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000564.3	-1	reviewed	p.A264T	0.977	353	0.3%	169	11.8%	0	-	benign(0.049)	tolerated(0.77)	neutral(0.004)	superfamily_Fibronectin type III
LRRN1	57633	genome.wustl.edu	37	3	3887506	3887506	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020873.5	+1	validated	p.P394L	1.000	54	0%	28	28.6%	0	-	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	HMMSmart_LRRCT,superfamily_SSF52058
SUMF1	285362	genome.wustl.edu	37	3	4459714	4459714	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182760.3	-1	reviewed	p.C235	0.865	38	0%	22	40.9%	23	26%	-	-	-	HMMPfam_DUF323
ITPR1	3708	genome.wustl.edu	37	3	4716773	4716773	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099952.2	+1	reviewed	p.L874I	1.000	359	0%	172	34.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ITPR1	3708	genome.wustl.edu	37	3	4767256	4767256	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356617	+1	known	p.N1717	0.988	87	0%	55	49.1%	0	-	-	-	-	NULL
GRM7	2917	genome.wustl.edu	37	3	6903501	6903501	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181874.2	+1	reviewed	p.P142	0.516	44	0%	39	53.8%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_SSF53822
GRM7	2917	genome.wustl.edu	37	3	7188341	7188341	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181874.2	+1	reviewed	p.I241T	1.000	63	0%	21	66.7%	0	-	possibly_damaging(0.551)	tolerated(0.34)	neutral(0.210)	HMMPfam_ANF_receptor,superfamily_SSF53822
SETD5	55209	genome.wustl.edu	37	3	9506118	9506118	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080517.1	+1	provisional	p.S829N	1.000	101	0%	57	33.3%	36	47.2%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
CPNE9	151835	genome.wustl.edu	37	3	9768870	9768870	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153635.2	+1	validated	p.Q492H	1.000	56	0%	54	40.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_VWA,superfamily_SSF53300
CPNE9	151835	genome.wustl.edu	37	3	9771302	9771302	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153635.2	+1	validated	p.R530C	1.000	28	0%	33	36.4%	1	0%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
BRPF1	7862	genome.wustl.edu	37	3	9787380	9787380	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003694.1	+1	reviewed	p.G1064	0.990	10	0%	28	28.6%	16	43.7%	-	-	-	NULL
TTLL3	26140	genome.wustl.edu	37	3	9854635	9854635	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025930.2	+1	provisional	p.K19N	1.000	26	0%	32	56.2%	11	63.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FANCD2	2177	genome.wustl.edu	37	3	10085213	10085213	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033084.3	+1	reviewed	p.L345	0.822	362	0%	148	35.1%	7	42.8%	-	-	-	NULL
FANCD2	2177	genome.wustl.edu	37	3	10106495	10106495	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033084.3	+1	reviewed	p.L702	0.383	95	0%	62	19.4%	11	18.1%	-	-	-	NULL
GHRL	51738	genome.wustl.edu	37	3	10331784	10331784	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016362.3	-1	reviewed	p.F27	1.000	11	0%	19	36.8%	2	50%	-	-	-	HMMPfam_Motilin_ghrelin
GHRL	51738	genome.wustl.edu	37	3	10331837	10331837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016362.3	-1	reviewed	p.L10I	1.000	19	0%	11	45.5%	1	0%	possibly_damaging(0.666)	tolerated(0.44)	neutral(0.248)	NULL
GHRLOS	100126793	genome.wustl.edu	37	3	10334515	10334515	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_004431.2	+1	validated	NULL	0.098	23	0%	20	40%	5	0%	-	-	-	-
GHRLOS	100126793	genome.wustl.edu	37	3	10334703	10334703	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_004431.2	+1	validated	NULL	0.000	44	0%	26	38.5%	0	-	-	-	-	-
ATP2B2	491	genome.wustl.edu	37	3	10444026	10444026	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001331.2	-1	reviewed	p.A135V	0.954	23	0%	24	29.2%	0	-	benign(0)	tolerated(0.6)	neutral(0.004)	superfamily_Calcium ATPase transmembrane domain M
SLC6A11	6538	genome.wustl.edu	37	3	10970992	10970992	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014229.1	+1	provisional	p.I446	1.000	134	0%	118	41.5%	0	-	-	-	-	HMMPfam_SNF
SLC6A1	6529	genome.wustl.edu	37	3	11059010	11059010	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003042.3	+1	validated	p.A38V	0.441	17	0%	16	37.5%	0	-	benign(0.019)	deleterious(0)	neutral(0.446)	NULL
HRH1	3269	genome.wustl.edu	37	3	11301478	11301478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000861.3	+1	reviewed	p.G252V	0.001	70	0%	56	55.4%	2	50%	benign(0.174)	deleterious(0.01)	neutral(0.422)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
HRH1	3269	genome.wustl.edu	37	3	11301951	11301951	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000861.3	+1	reviewed	p.E410K	1.000	108	0%	81	42%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
VGLL4	9686	genome.wustl.edu	37	3	11643325	11643325	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128219.1	-1	validated	p.R85H	1.000	48	0%	20	30%	92	46.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SYN2	6854	genome.wustl.edu	37	3	12211360	12211360	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000341648	+1	known	p.T352I	1.000	36	0%	19	21.1%	1	0%	possibly_damaging(0.923)	tolerated(0.3)	neutral(0.401)	NULL
SYN2	6854	genome.wustl.edu	37	3	12228926	12228926	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000341648	+1	known	p.R407Q	0.982	6	0.000	11	0.636	0	-	unknown(0)	tolerated(0.58)	-	NULL
MKRN2	23609	genome.wustl.edu	37	3	12618191	12618191	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014160.3	+1	provisional	p.D307Y	1.000	284	0.4%	158	44.9%	14	57.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_SSF57850
MKRN2	23609	genome.wustl.edu	37	3	12623314	12623314	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014160.3	+1	provisional	p.A326P	0.908	146	0%	58	12.1%	14	21.4%	benign(0.007)	tolerated(0.31)	neutral(0.027)	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,superfamily_SSF57850
RAF1	5894	genome.wustl.edu	37	3	12633274	12633274	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002880.3	-1	reviewed	p.I376L	1.000	130	0%	55	41.8%	61	40.9%	benign(0)	tolerated(0.29)	neutral(0.029)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CAND2	23066	genome.wustl.edu	37	3	12854865	12854865	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012298.2	+1	validated	p.E235D	0.998	161	0.6%	130	43.8%	6	83.3%	benign(0.002)	tolerated(0.71)	neutral(0.002)	superfamily_ARM-type_fold
IQSEC1	9922	genome.wustl.edu	37	3	12977154	12977154	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000450726	-1	known	p.*469R	0.050	51	0%	41	36.6%	16	50%	-	-	-	NULL
TMEM43	79188	genome.wustl.edu	37	3	14183232	14183232	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024334.2	+1	reviewed	p.A380	0.003	31	0%	42	64.3%	40	47.5%	-	-	-	NULL
GRIP2	80852	genome.wustl.edu	37	3	14552769	14552769	+	Missense_Mutation	SNP	G	G	A	rs143935537	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080423.1	-1	provisional	p.R711C	1.000	53	0%	62	46.8%	0	-	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
C3orf20	84077	genome.wustl.edu	37	3	14724532	14724532	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032137.4	+1	validated	p.R104	0.000	36	0%	45	15.6%	0	-	-	-	-	NULL
C3orf20	84077	genome.wustl.edu	37	3	14798997	14798997	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032137.4	+1	validated	p.V687G	0.798	8	0.000	15	0.400	0	-	possibly_damaging(0.692)	deleterious(0.02)	deleterious(0.631)	NULL
C3orf20	84077	genome.wustl.edu	37	3	14801404	14801404	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032137.4	+1	validated	p.Y751H	0.450	37	0%	23	30.4%	0	-	benign(0)	tolerated(1)	-	NULL
FGD5	152273	genome.wustl.edu	37	3	14860649	14860649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152536.3	+1	validated	p.S24I	0.090	18	0%	16	25%	0	-	possibly_damaging(0.92)	deleterious(0)	deleterious(0.816)	NULL
ZFYVE20	64145	genome.wustl.edu	37	3	15126301	15126301	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022340.2	-1	validated	p.R180H	1.000	48	0%	51	56.9%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FYVE,HMMSmart_FYVE,superfamily_FYVE_PHD_ZnF
CAPN7	23473	genome.wustl.edu	37	3	15262462	15262462	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014296.2	+1	reviewed	p.Y204	0.876	70	0%	41	56.1%	8	75%	-	-	-	superfamily_SSF54001
COLQ	8292	genome.wustl.edu	37	3	15493164	15493164	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005677.3	-1	reviewed	p.R452H	1.000	45	0%	28	21.4%	0	-	probably_damaging(1)	-	-	NULL
HACL1	26061	genome.wustl.edu	37	3	15624452	15624452	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012260.2	-1	validated	p.T200I	0.001	111	0%	43	48.8%	13	53.8%	benign(0.001)	tolerated(0.28)	neutral(0.032)	superfamily_SSF52467
BTD	686	genome.wustl.edu	37	3	15686858	15686858	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000060.2	+1	reviewed	p.F499L	0.071	67	0%	41	43.9%	3	33.3%	benign(0)	tolerated(0.42)	neutral(0.014)	NULL
ANKRD28	23243	genome.wustl.edu	37	3	15736308	15736308	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015199.2	-1	provisional	p.S537A	1.000	322	0.3%	132	40.9%	10	50%	benign(0.001)	tolerated(0.44)	neutral(0.013)	HMMPfam_Ank,superfamily_Ankyrin repeat
GALNTL2	117248	genome.wustl.edu	37	3	16216751	16216751	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_054110.4	+1	validated	p.A31	0.048	46	0%	37	48.6%	0	-	-	-	-	NULL
GALNTL2	117248	genome.wustl.edu	37	3	16216808	16216808	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_054110.4	+1	validated	p.K50	0.004	51	2%	52	46.2%	0	-	-	-	-	NULL
DAZL	1618	genome.wustl.edu	37	3	16639613	16639613	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001351.2	-1	reviewed	p.R75*	1.000	370	0%	110	45.5%	0	-	-	-	-	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
TBC1D5	9779	genome.wustl.edu	37	3	17279908	17279908	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134381.1	-1	validated	p.T445	1.000	36	0%	18	44.4%	7	57.1%	-	-	-	NULL
SATB1	6304	genome.wustl.edu	37	3	18393598	18393598	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001131010.1	-1	validated	p.F555	1.000	53	0%	47	42.6%	7	57.1%	-	-	-	HMMPfam_CUT
KCNH8	131096	genome.wustl.edu	37	3	19436645	19436645	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144633.2	+1	reviewed	p.R340H	1.000	92	0%	16	31.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
KCNH8	131096	genome.wustl.edu	37	3	19491760	19491760	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144633.2	+1	reviewed	p.T513I	1.000	108	0%	30	53.3%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	superfamily_cNMP_binding
KCNH8	131096	genome.wustl.edu	37	3	19492803	19492803	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144633.2	+1	reviewed	p.L578M	1.000	127	0%	41	53.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_cNMP_binding,HMMSmart_cNMP,superfamily_cNMP_binding
KCNH8	131096	genome.wustl.edu	37	3	19554592	19554592	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144633.2	+1	reviewed	p.S737L	0.039	58	0%	28	53.6%	0	-	benign(0.026)	tolerated(0.37)	neutral(0.020)	NULL
EFHB	151651	genome.wustl.edu	37	3	19924124	19924124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144715.3	-1	validated	p.A749V	0.807	122	0.8%	59	37.3%	0	-	possibly_damaging(0.876)	tolerated(0.19)	neutral(0.391)	superfamily_EF-hand
EFHB	151651	genome.wustl.edu	37	3	19947140	19947140	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144715.3	-1	validated	p.S464P	0.921	184	0%	61	52.5%	0	-	benign(0.379)	tolerated(0.07)	neutral(0.440)	NULL
EFHB	151651	genome.wustl.edu	37	3	19959749	19959749	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144715.3	-1	validated	p.T384	0.889	464	0.6%	255	43.1%	0	-	-	-	-	NULL
KAT2B	8850	genome.wustl.edu	37	3	20167577	20167577	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003884.4	+1	reviewed	p.E532*	1.000	72	0%	37	43.2%	6	16.6%	-	-	-	superfamily_Acyl_CoA_acyltransferase
SGOL1	151648	genome.wustl.edu	37	3	20215890	20215890	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012410.2	-1	provisional	p.S378F	1.000	346	0%	182	42.3%	7	28.5%	probably_damaging(0.981)	deleterious(0.03)	deleterious(0.790)	NULL
TOP2B	7155	genome.wustl.edu	37	3	25654114	25654114	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001068.2	-1	reviewed	p.K1221N	1.000	250	0%	132	41.7%	123	47.1%	possibly_damaging(0.869)	deleterious(0.03)	deleterious(0.702)	NULL
TOP2B	7155	genome.wustl.edu	37	3	25677595	25677595	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001068.2	-1	reviewed	p.K223	1.000	371	0%	146	51.4%	30	46.6%	-	-	-	HMMSmart_TOP2c,HMMPfam_HATPase_c,HMMSmart_HATPase_c,superfamily_ATP_bd_ATPase
NGLY1	55768	genome.wustl.edu	37	3	25761081	25761081	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018297.3	-1	reviewed	p.V612A	1.000	241	0%	139	48.2%	29	48.2%	possibly_damaging(0.663)	tolerated(0.09)	deleterious(0.531)	NULL
NGLY1	55768	genome.wustl.edu	37	3	25770728	25770728	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018297.3	-1	reviewed	p.R503C	0.001	328	0.3%	98	36.7%	20	40%	benign(0.006)	tolerated(0.1)	neutral(0.286)	HMMSmart_SM00613
LRRC3B	116135	genome.wustl.edu	37	3	26751860	26751860	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052953.2	+1	provisional	p.R233W	0.998	90	0%	45	42.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NEK10	152110	genome.wustl.edu	37	3	27233563	27233563	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000396636	-1	known	p.R821Q	1.000	264	0%	153	46.4%	0	-	possibly_damaging(0.892)	deleterious(0)	deleterious(0.796)	NULL
NEK10	152110	genome.wustl.edu	37	3	27326400	27326400	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000424275	-1	known	p.S101N	0.948	306	0%	150	46.7%	1	100%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SLC4A7	9497	genome.wustl.edu	37	3	27463208	27463208	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003615.3	-1	validated	p.G434	0.964	90	0%	44	45.5%	7	71.4%	-	-	-	HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein
GADL1	339896	genome.wustl.edu	37	3	30903221	30903221	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207359.2	-1	validated	p.K25T	0.870	329	0%	101	41.6%	0	-	benign(0.059)	tolerated(0.16)	neutral(0.064)	NULL
OSBPL10	114884	genome.wustl.edu	37	3	31725223	31725223	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017784.4	-1	reviewed	p.Y543*	1.000	100	0%	70	42.9%	11	18.1%	-	-	-	HMMPfam_Oxysterol_BP
CNOT10	25904	genome.wustl.edu	37	3	32806251	32806251	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015442.1	+1	provisional	p.A652T	1.000	47	0%	34	47.1%	42	50%	possibly_damaging(0.612)	tolerated(0.14)	neutral(0.462)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
CNOT10	25904	genome.wustl.edu	37	3	32811380	32811380	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015442.1	+1	provisional	p.A669V	1.000	309	0%	180	45.6%	47	65.9%	benign(0.045)	tolerated(0.65)	neutral(0.005)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
TRIM71	131405	genome.wustl.edu	37	3	32933261	32933261	+	Silent	SNP	C	C	T	rs146296287	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039111.1	+1	provisional	p.I855	1.000	16	0%	14	64.3%	0	-	-	-	-	HMMPfam_NHL,superfamily_SSF101898
GLB1	2720	genome.wustl.edu	37	3	33055752	33055752	+	Silent	SNP	C	C	T	rs191203702	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000404.2	-1	reviewed	p.T510	0.004	44	0%	46	10.9%	70	2.8%	-	-	-	NULL
FBXL2	25827	genome.wustl.edu	37	3	33415407	33415407	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012157.3	+1	reviewed	p.S217	0.981	121	0%	65	43.1%	6	33.3%	-	-	-	superfamily_SSF52047
FBXL2	25827	genome.wustl.edu	37	3	33416902	33416902	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012157.3	+1	reviewed	p.P260	0.000	90	0%	52	51.9%	9	55.5%	-	-	-	superfamily_SSF52047
UBP1	7342	genome.wustl.edu	37	3	33438622	33438622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128161.1	-1	validated	p.D396N	1.000	172	0%	80	38.8%	32	40.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SAM/Pointed domain
UBP1	7342	genome.wustl.edu	37	3	33467131	33467131	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128161.1	-1	validated	p.T72	0.000	93	0%	29	34.5%	34	47%	-	-	-	HMMPfam_CP2
CLASP2	23122	genome.wustl.edu	37	3	33543233	33543233	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015097.1	-1	validated	p.R1449W	1.000	142	0.7%	52	57.7%	19	47.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HEAT,superfamily_ARM repeat
CLASP2	23122	genome.wustl.edu	37	3	33731377	33731377	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015097.1	-1	validated	p.R108*	1.000	302	0%	138	16.7%	5	0%	-	-	-	superfamily_ARM repeat
ENSG00000172995	0	genome.wustl.edu	37	3	35725328	35725328	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000432450	+1	known	p.I94	0.000	178	0%	25	48%	0	-	-	-	-	NULL
DCLK3	85443	genome.wustl.edu	37	3	36763045	36763045	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033403.1	-1	validated	p.V520I	1.000	177	0%	60	45%	0	-	probably_damaging(0.986)	deleterious(0.02)	deleterious(0.818)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
TRANK1	9881	genome.wustl.edu	37	3	36874329	36874329	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014831.2	-1	provisional	p.E1655K	0.108	107	0%	72	40.3%	1	0%	benign(0.039)	deleterious(0.04)	neutral(0.351)	NULL
TRANK1	9881	genome.wustl.edu	37	3	36897247	36897247	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014831.2	-1	provisional	p.T728	0.446	232	0%	120	45.8%	2	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
TRANK1	9881	genome.wustl.edu	37	3	36897843	36897843	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014831.2	-1	provisional	p.G530R	0.000	13	0%	13	38.5%	0	-	benign(0)	deleterious(0.04)	neutral(0.349)	superfamily_P-loop containing nucleoside triphosphate hydrolases
TRANK1	9881	genome.wustl.edu	37	3	36897897	36897897	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014831.2	-1	provisional	p.S512R	0.970	15	0%	12	58.3%	2	100%	possibly_damaging(0.836)	deleterious(0.01)	deleterious(0.725)	superfamily_P-loop containing nucleoside triphosphate hydrolases
LRRFIP2	9209	genome.wustl.edu	37	3	37095949	37095949	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006309.2	-1	validated	p.K670Q	1.000	736	0%	327	39.4%	55	60%	probably_damaging(0.997)	tolerated(0.05)	deleterious(0.811)	NULL
GOLGA4	2803	genome.wustl.edu	37	3	37327545	37327545	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002078.4	+1	reviewed	p.K173T	1.000	401	0%	155	45.2%	9	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GOLGA4	2803	genome.wustl.edu	37	3	37388731	37388731	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002078.4	+1	reviewed	p.E2174K	1.000	422	0%	160	41.9%	57	40.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_GRIP,HMMSmart_SM00755,superfamily_GRIP domain
C3orf35	339883	genome.wustl.edu	37	3	37458846	37458846	+	Missense_Mutation	SNP	G	G	A	rs193097162	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178339.2	+1	validated	p.R30Q	0.000	144	0%	60	33.3%	3	66.6%	possibly_damaging(0.666)	-	-	NULL
C3orf35	339883	genome.wustl.edu	37	3	37476486	37476486	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000434797	+1	known	p.L53M	0.008	47	0%	25	20%	1	0%	-	-	-	NULL
CTDSPL	10217	genome.wustl.edu	37	3	37988585	37988585	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008392.1	+1	validated	p.S39	0.955	24	0%	22	54.5%	9	33.3%	-	-	-	NULL
VILL	50853	genome.wustl.edu	37	3	38039622	38039622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015873.3	+1	reviewed	p.A269V	0.998	34	0%	35	40%	5	0%	probably_damaging(0.989)	deleterious(0.03)	deleterious(0.804)	HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_C-terminal gelsolin-like domain of Sec23/24
DLEC1	9940	genome.wustl.edu	37	3	38103775	38103775	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007337.2	+1	reviewed	p.F263	0.000	90	0%	77	42.9%	0	-	-	-	-	NULL
DLEC1	9940	genome.wustl.edu	37	3	38129840	38129840	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007337.2	+1	reviewed	p.S542	0.000	211	0%	145	45.5%	0	-	-	-	-	NULL
DLEC1	9940	genome.wustl.edu	37	3	38153202	38153202	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007337.2	+1	reviewed	p.R1160W	0.142	33	0%	25	64%	0	-	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	NULL
MYD88	4615	genome.wustl.edu	37	3	38182748	38182748	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002468.4	+1	reviewed	p.R301C	0.930	61	0%	61	39.3%	44	43.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
SLC22A13	9390	genome.wustl.edu	37	3	38316634	38316634	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000450935	+1	known	p.L172F	0.997	9	0.000	14	0.429	0	-	unknown(0)	tolerated(0.37)	-	NULL
ACVR2B	93	genome.wustl.edu	37	3	38524741	38524741	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001106.3	+1	reviewed	p.N486I	1.000	46	0%	45	48.9%	2	0%	benign(0.018)	tolerated(0.13)	neutral(0.253)	superfamily_Protein kinase-like (PK-like)
EXOG	9941	genome.wustl.edu	37	3	38548433	38548433	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005107.3	+1	reviewed	p.D207N	0.800	348	0%	151	41.7%	1	100%	benign(0.143)	tolerated(0.05)	neutral(0.358)	HMMPfam_Endonuclease_NS,HMMSmart_SM00477,superfamily_His-Me finger endonucleases
SCN5A	6331	genome.wustl.edu	37	3	38592200	38592200	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099404.1	-1	reviewed	p.S1888F	1.000	150	0%	163	32.5%	2	100%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	NULL
SCN5A	6331	genome.wustl.edu	37	3	38592489	38592489	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099404.1	-1	reviewed	p.D1792N	1.000	65	0%	61	34.4%	0	-	possibly_damaging(0.576)	deleterious(0)	deleterious(0.642)	superfamily_Voltage-gated potassium channels
SCN5A	6331	genome.wustl.edu	37	3	38595795	38595795	+	Silent	SNP	G	G	A	rs141789366	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099404.1	-1	reviewed	p.F1596	0.997	113	0%	64	40.6%	2	100%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN5A	6331	genome.wustl.edu	37	3	38607993	38607993	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099404.1	-1	reviewed	p.V1249	1.000	51	0%	34	47.1%	1	100%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN5A	6331	genome.wustl.edu	37	3	38628935	38628935	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099404.1	-1	reviewed	p.L798	1.000	77	0%	65	38.5%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN5A	6331	genome.wustl.edu	37	3	38651407	38651407	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099404.1	-1	reviewed	p.A251D	1.000	21	0%	25	36%	1	100%	probably_damaging(1)	tolerated(0.24)	deleterious(0.537)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN10A	6336	genome.wustl.edu	37	3	38835285	38835285	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006514.2	-1	validated	p.E73*	0.710	120	0%	60	40%	0	-	-	-	-	NULL
SCN11A	11280	genome.wustl.edu	37	3	38921503	38921503	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014139.2	-1	validated	p.A1111T	1.000	149	0%	39	46.2%	0	-	possibly_damaging(0.921)	deleterious(0)	deleterious(0.816)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN11A	11280	genome.wustl.edu	37	3	38946775	38946775	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014139.2	-1	validated	p.N504I	0.971	168	0%	73	41.1%	0	-	possibly_damaging(0.855)	deleterious(0.05)	deleterious(0.675)	NULL
TTC21A	199223	genome.wustl.edu	37	3	39170639	39170639	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105513.2	+1	validated	p.A666V	1.000	29	0%	26	38.5%	5	60%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	superfamily_TPR-like
TTC21A	199223	genome.wustl.edu	37	3	39179083	39179083	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105513.2	+1	validated	p.V1194A	0.001	28	0%	24	29.2%	6	33.3%	benign(0)	tolerated(0.23)	neutral(0.042)	superfamily_TPR-like
LOC729454	729454	genome.wustl.edu	37	3	39255765	39255765	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001130287.2	+1	model	p.E121*	1.000	49	0%	19	31.6%	0	-	-	-	-	HMMPfam_Cofilin_ADF,HMMSmart_SM00102,superfamily_Actin depolymerizing proteins
CX3CR1	1524	genome.wustl.edu	37	3	39307582	39307582	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001337.3	-1	reviewed	p.N140S	0.009	52	0%	57	45.6%	0	-	benign(0.001)	tolerated(0.12)	neutral(0.261)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CX3CR1	1524	genome.wustl.edu	37	3	39307991	39307991	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001337.3	-1	reviewed	p.F4V	0.000	48	0%	27	48.1%	1	0%	benign(0)	tolerated(0.55)	neutral(0.007)	superfamily_Family A G protein-coupled receptor-like
CCR8	1237	genome.wustl.edu	37	3	39373997	39373997	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005201.3	+1	reviewed	p.V59I	1.000	187	0%	86	43%	1	0%	possibly_damaging(0.916)	tolerated(1)	neutral(0.367)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RPSA	3921	genome.wustl.edu	37	3	39453434	39453434	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012321.1	+1	reviewed	p.E225D	1.000	70	0%	60	48.3%	2543	47.7%	benign(0.002)	tolerated(0.29)	neutral(0.029)	NULL
ENTPD3	956	genome.wustl.edu	37	3	40464801	40464801	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001248.2	+1	validated	p.Y375C	1.000	246	0%	125	12.8%	16	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GDA1_CD39
ZNF620	253639	genome.wustl.edu	37	3	40553010	40553010	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175888.2	+1	validated	p.W25L	0.689	326	0%	223	25.1%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF620	253639	genome.wustl.edu	37	3	40557834	40557834	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175888.2	+1	validated	p.K250T	1.000	134	0%	65	43.1%	3	33.3%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	superfamily_C2H2 and C2HC zinc fingers
CTNNB1	1499	genome.wustl.edu	37	3	41268823	41268823	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098209.1	+1	reviewed	p.K354T	1.000	176	0%	73	35.6%	267	44.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
CTNNB1	1499	genome.wustl.edu	37	3	41275151	41275151	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098209.1	+1	reviewed	p.C439	1.000	132	0%	67	35.8%	324	45.3%	-	-	-	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
ULK4	54986	genome.wustl.edu	37	3	41795883	41795883	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017886.2	-1	validated	p.R764H	0.974	165	0%	82	45.1%	2	100%	benign(0.007)	tolerated(0.16)	neutral(0.059)	NULL
TRAK1	22906	genome.wustl.edu	37	3	42133046	42133046	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042646.1	+1	validated	p.A29T	0.000	116	0%	92	45.7%	0	-	benign(0)	tolerated(0.29)	neutral(0.029)	NULL
TRAK1	22906	genome.wustl.edu	37	3	42233077	42233077	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042646.1	+1	validated	p.T240A	1.000	45	0%	38	42.1%	22	45.4%	possibly_damaging(0.466)	tolerated(0.43)	neutral(0.167)	HMMPfam_HAP1_N
TRAK1	22906	genome.wustl.edu	37	3	42264629	42264629	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042646.1	+1	validated	p.Y754	0.596	32	0%	36	13.9%	30	16.6%	-	-	-	NULL
TRAK1	22906	genome.wustl.edu	37	3	42264699	42264699	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042646.1	+1	validated	p.I778L	1.000	46	0%	53	56.6%	44	56.8%	benign(0.001)	tolerated(0.34)	neutral(0.023)	NULL
TRAK1	22906	genome.wustl.edu	37	3	42264716	42264716	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042646.1	+1	validated	p.P783	0.025	59	0%	58	41.4%	31	35.4%	-	-	-	NULL
TRAK1	22906	genome.wustl.edu	37	3	42264876	42264876	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042646.1	+1	validated	p.S837P	1.000	24	0%	26	30.8%	23	60.8%	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	NULL
NKTR	4820	genome.wustl.edu	37	3	42672770	42672770	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005385.3	+1	reviewed	p.I171T	1.000	238	0%	98	38.8%	4	75%	benign(0.099)	deleterious(0.02)	neutral(0.391)	HMMPfam_Pro_isomerase,superfamily_CSA_PPIase
ZBTB47	92999	genome.wustl.edu	37	3	42699892	42699892	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000232974	+1	known	p.C15	0.998	4	0.000	19	0.526	4	50%	-	-	-	superfamily_POZ domain,HMMPfam_BTB
ZBTB47	92999	genome.wustl.edu	37	3	42700001	42700001	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000232974	+1	known	p.L52	1.000	11	0%	27	63%	9	33.3%	-	-	-	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
CCDC13	152206	genome.wustl.edu	37	3	42750588	42750588	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144719.3	-1	validated	p.L678M	0.997	46	0%	30	36.7%	0	-	benign(0.196)	deleterious(0)	neutral(0.463)	NULL
CCDC13	152206	genome.wustl.edu	37	3	42799774	42799774	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144719.3	-1	validated	p.Q22*	1.000	438	0%	292	37.7%	0	-	-	-	-	NULL
HIGD1A	25994	genome.wustl.edu	37	3	42835682	42835682	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099668.1	-1	validated	p.R36*	1.000	212	0%	107	38.3%	84	17.8%	-	-	-	HMMPfam_HIG_1_N
ZNF662	389114	genome.wustl.edu	37	3	42956246	42956246	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134656.1	+1	validated	p.K253N	1.000	113	0%	63	50.8%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF662	389114	genome.wustl.edu	37	3	42956695	42956695	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134656.1	+1	validated	p.R403Q	0.000	126	0%	72	50%	2	0%	probably_damaging(0.978)	tolerated(1)	neutral(0.420)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SNRK	54861	genome.wustl.edu	37	3	43389121	43389121	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100594.1	+1	validated	p.K457T	1.000	170	0%	109	41.3%	14	35.7%	benign(0.261)	tolerated(0.11)	neutral(0.299)	NULL
ABHD5	51099	genome.wustl.edu	37	3	43756487	43756487	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016006.4	+1	reviewed	p.S237Y	0.995	186	0%	82	15.9%	13	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Abhydrolase_1,superfamily_SSF53474
ABHD5	51099	genome.wustl.edu	37	3	43760009	43760009	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000413300	+1	known	p.R146*	0.622	175	0%	62	50%	21	47.6%	-	-	-	NULL
C3orf77	375337	genome.wustl.edu	37	3	44285125	44285125	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145030.1	+1	validated	p.S376N	0.049	70	0%	33	48.5%	0	-	probably_damaging(0.957)	deleterious(0)	deleterious(0.845)	NULL
C3orf77	375337	genome.wustl.edu	37	3	44286066	44286066	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145030.1	+1	validated	p.P690S	1.000	59	0%	42	52.4%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_PAZ
C3orf77	375337	genome.wustl.edu	37	3	44362540	44362540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145030.1	+1	validated	p.T1443M	0.983	215	0%	116	47.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C3orf23	285343	genome.wustl.edu	37	3	44402873	44402873	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173826.3	+1	validated	p.S61Y	1.000	222	0%	62	37.1%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C3orf23	285343	genome.wustl.edu	37	3	44409106	44409106	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173826.3	+1	validated	p.P160S	1.000	118	0%	74	54.1%	2	100%	benign(0.182)	tolerated(0.11)	neutral(0.288)	NULL
ZNF167	55888	genome.wustl.edu	37	3	44611461	44611461	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018651.2	+1	validated	p.F287L	0.000	324	0%	149	37.6%	0	-	benign(0)	tolerated(0.16)	neutral(0.059)	HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF167	55888	genome.wustl.edu	37	3	44611646	44611646	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018651.2	+1	validated	p.K348N	0.000	256	0%	97	14.4%	1	100%	benign(0.01)	tolerated(0.52)	neutral(0.009)	NULL
ZNF197	10168	genome.wustl.edu	37	3	44684211	44684211	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006991.3	+1	reviewed	p.R530I	1.000	102	0%	48	45.8%	3	66.6%	probably_damaging(0.985)	tolerated(0.18)	deleterious(0.488)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF35	7584	genome.wustl.edu	37	3	44700824	44700824	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003420.3	+1	validated	p.R323	0.013	125	0%	53	39.6%	6	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF35	7584	genome.wustl.edu	37	3	44701376	44701376	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003420.3	+1	validated	p.C507W	1.000	70	0%	31	32.3%	8	37.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF502	91392	genome.wustl.edu	37	3	44763275	44763275	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134440.1	+1	validated	p.P322	0.000	107	0%	61	45.9%	2	50%	unknown(0)	tolerated(0.19)	-	superfamily_SSF57667
KIF15	56992	genome.wustl.edu	37	3	44846650	44846650	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020242.2	+1	validated	p.E607*	1.000	189	0.5%	72	41.7%	3	66.6%	-	-	-	NULL
ZDHHC3	51304	genome.wustl.edu	37	3	44975392	44975392	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135180.1	-1	validated	p.F172	1.000	84	0%	59	40.7%	31	35.4%	-	-	-	HMMPfam_zf-DHHC
LARS2	23395	genome.wustl.edu	37	3	45533227	45533227	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015340.3	+1	reviewed	p.S486	0.000	34	0%	30	50%	11	18.1%	-	-	-	superfamily_SSF52374
SLC6A20	54716	genome.wustl.edu	37	3	45811778	45811778	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020208.3	-1	reviewed	p.A341T	0.017	95	0%	68	38.2%	0	-	possibly_damaging(0.455)	tolerated(0.26)	neutral(0.183)	HMMPfam_SNF
SLC6A20	54716	genome.wustl.edu	37	3	45823653	45823653	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020208.3	-1	reviewed	p.E62K	1.000	14	0%	20	35%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF
FYCO1	79443	genome.wustl.edu	37	3	46005882	46005882	+	Missense_Mutation	SNP	G	G	A	rs148445016	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024513.2	-1	validated	p.A1072V	0.859	28	0%	16	43.8%	2	50%	possibly_damaging(0.799)	tolerated(0.12)	deleterious(0.561)	NULL
FYCO1	79443	genome.wustl.edu	37	3	46007964	46007964	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024513.2	-1	validated	p.L954	0.994	21	0%	38	26.3%	6	50%	-	-	-	NULL
CCR3	1232	genome.wustl.edu	37	3	46307005	46307005	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001837.3	+1	reviewed	p.S119I	0.831	44	0%	20	55%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
CCR3	1232	genome.wustl.edu	37	3	46307319	46307319	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001837.3	+1	reviewed	p.K224E	0.002	118	0%	65	36.9%	0	-	possibly_damaging(0.866)	deleterious(0)	deleterious(0.780)	HMMPfam_7tm_1,superfamily_SSF81321
CCR2	729230	genome.wustl.edu	37	3	46399635	46399635	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123041.2	+1	validated	p.R206M	1.000	156	0%	66	50%	1	0%	benign(0.002)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LTF	4057	genome.wustl.edu	37	3	46497369	46497369	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002343.2	-1	reviewed	p.R139H	0.239	30	0%	28	42.9%	0	-	benign(0.004)	deleterious(0.03)	neutral(0.364)	HMMPfam_Transferrin,HMMSmart_TR_FER,superfamily_SSF53850
LTF	4057	genome.wustl.edu	37	3	46501180	46501180	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002343.2	-1	reviewed	p.R58I	0.000	93	0%	97	47.4%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_Transferrin,HMMSmart_TR_FER,superfamily_SSF53850
LRRC2	79442	genome.wustl.edu	37	3	46586569	46586569	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024512.3	-1	validated	p.A100	0.000	47	0%	35	48.6%	0	-	-	-	-	superfamily_SSF52058
ALS2CL	259173	genome.wustl.edu	37	3	46724760	46724760	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147129.2	-1	validated	p.K323N	0.996	7	0.000	8	0.500	2	0%	benign(0.261)	tolerated(0.33)	neutral(0.051)	NULL
ALS2CL	259173	genome.wustl.edu	37	3	46725291	46725291	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147129.2	-1	validated	p.A298D	0.909	45	0%	46	50%	8	50%	possibly_damaging(0.449)	deleterious(0.02)	deleterious(0.530)	NULL
MYL3	4634	genome.wustl.edu	37	3	46904757	46904757	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000258.2	-1	reviewed	p.I42F	0.991	48	0%	23	52.2%	0	-	possibly_damaging(0.908)	deleterious(0.01)	deleterious(0.767)	NULL
NBEAL2	23218	genome.wustl.edu	37	3	47037797	47037797	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015175.1	+1	validated	p.R730C	1.000	11	0%	13	30.8%	22	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NBEAL2	23218	genome.wustl.edu	37	3	47047508	47047508	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015175.1	+1	validated	p.A2292T	0.977	7	0.000	21	0.476	37	48.6%	probably_damaging(0.957)	tolerated(0.12)	deleterious(0.661)	HMMPfam_Beach,superfamily_BEACH domain,superfamily_WD40 repeat-like
NBEAL2	23218	genome.wustl.edu	37	3	47049566	47049566	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015175.1	+1	validated	p.L2537M	0.998	29	0%	51	49%	69	56.5%	possibly_damaging(0.894)	tolerated(0.22)	neutral(0.394)	superfamily_WD40 repeat-like
SETD2	29072	genome.wustl.edu	37	3	47061326	47061326	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014159.6	-1	reviewed	p.S2452L	0.806	566	0.2%	340	50%	68	42.6%	possibly_damaging(0.952)	deleterious(0)	deleterious(0.840)	NULL
SCAP	22937	genome.wustl.edu	37	3	47455769	47455769	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012235.2	-1	reviewed	p.S1165	1.000	53	0%	32	68.8%	130	51.5%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
DHX30	22907	genome.wustl.edu	37	3	47890692	47890692	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138615.2	+1	reviewed	p.K980N	1.000	20	0%	21	38.1%	72	45.8%	benign(0.006)	tolerated(0.39)	neutral(0.016)	HMMPfam_DUF1605
CDC25A	993	genome.wustl.edu	37	3	48226147	48226147	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001789.2	-1	reviewed	p.E96*	1.000	214	0%	117	40.2%	1	0%	-	-	-	HMMPfam_M-inducer_phosp
PLXNB1	5364	genome.wustl.edu	37	3	48465757	48465757	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130082.1	-1	validated	p.C88	1.000	9	0.000	10	0.600	31	61.2%	-	-	-	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
CCDC51	79714	genome.wustl.edu	37	3	48475217	48475217	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024661.3	-1	validated	p.H126R	1.000	36	0%	31	48.4%	13	69.2%	benign(0.004)	tolerated(0.08)	neutral(0.300)	NULL
SHISA5	51246	genome.wustl.edu	37	3	48511224	48511224	+	Silent	SNP	G	G	A	rs147137615	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016479.3	-1	validated	p.A111	0.030	16	0%	22	59.1%	252	40.8%	-	-	-	NULL
COL7A1	1294	genome.wustl.edu	37	3	48623903	48623903	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000094.3	-1	reviewed	p.V1138M	0.186	21	0%	17	29.4%	4	0%	unknown(0)	deleterious(0)	-	HMMPfam_VWA,superfamily_vWA-like
SLC26A6	65010	genome.wustl.edu	37	3	48667108	48667108	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022911.2	-1	reviewed	p.T522	0.051	183	0%	175	43.4%	18	61.1%	-	-	-	NULL
CELSR3	1951	genome.wustl.edu	37	3	48679840	48679840	+	Silent	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001407.2	-1	reviewed	p.A2872	1.000	19	0%	16	75%	0	-	-	-	-	NULL
CELSR3	1951	genome.wustl.edu	37	3	48686247	48686247	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001407.2	-1	reviewed	p.R2228*	1.000	12	0%	11	36.4%	4	100%	-	-	-	NULL
CELSR3	1951	genome.wustl.edu	37	3	48697622	48697622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001407.2	-1	reviewed	p.A816T	1.000	31	0%	21	33.3%	1	0%	probably_damaging(0.991)	deleterious(0.02)	deleterious(0.827)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
CELSR3	1951	genome.wustl.edu	37	3	48698342	48698342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001407.2	-1	reviewed	p.A576T	1.000	10	0%	14	35.7%	0	-	benign(0.004)	tolerated(0.63)	neutral(0.004)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
NCKIPSD	51517	genome.wustl.edu	37	3	48719208	48719208	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016453.2	-1	reviewed	p.H202Y	0.981	11	0%	17	35.3%	20	30%	benign(0)	tolerated(0.3)	neutral(0.029)	NULL
ENSG00000232483	0	genome.wustl.edu	37	3	48732881	48732881	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000421921	+1	novel	NULL	0.000	27	0%	18	33.3%	1	0%	-	-	-	-
ARIH2	10425	genome.wustl.edu	37	3	48965100	48965100	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006321.2	+1	provisional	p.D37N	1.000	65	0%	48	35.4%	29	51.7%	benign(0.071)	deleterious(0.01)	neutral(0.411)	NULL
WDR6	11180	genome.wustl.edu	37	3	49049535	49049535	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018031.3	+1	reviewed	p.A220S	1.000	15	0%	20	40%	69	62.3%	benign(0.323)	tolerated(0.64)	neutral(0.104)	NULL
WDR6	11180	genome.wustl.edu	37	3	49052471	49052471	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018031.3	+1	reviewed	p.S1069Y	0.002	28	0%	27	14.8%	159	11.3%	probably_damaging(0.983)	deleterious(0.01)	deleterious(0.835)	HMMSmart_SM00320,superfamily_WD40 repeat-like
WDR6	11180	genome.wustl.edu	37	3	49052592	49052592	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018031.3	+1	reviewed	p.T1109	0.432	21	0%	25	20%	185	12.9%	-	-	-	NULL
USP19	10869	genome.wustl.edu	37	3	49153998	49153998	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006677.1	-1	provisional	p.S289L	1.000	63	0%	40	42.5%	24	50%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_HSP20-like chaperones,HMMPfam_DUF1872
CCDC71	64925	genome.wustl.edu	37	3	49200658	49200658	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022903.3	-1	validated	p.Q328	0.000	70	0%	90	23.3%	36	30.5%	-	-	-	NULL
C3orf62	375341	genome.wustl.edu	37	3	49313875	49313875	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198562.2	-1	validated	p.R144K	0.991	259	0%	166	37.3%	4	50%	probably_damaging(0.968)	deleterious(0)	deleterious(0.855)	NULL
USP4	7375	genome.wustl.edu	37	3	49321512	49321512	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000431357	-1	known	p.L555F	0.224	148	0%	112	38.4%	33	54.5%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
USP4	7375	genome.wustl.edu	37	3	49331981	49331981	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003363.3	-1	validated	p.P581L	1.000	58	0%	44	36.4%	30	53.3%	benign(0.001)	deleterious(0)	neutral(0.445)	HMMPfam_UCH,superfamily_Cysteine proteinases
AMT	275	genome.wustl.edu	37	3	49456802	49456802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000481.3	-1	reviewed	p.A196V	0.185	30	0%	26	38.5%	12	75%	benign(0.028)	tolerated(0.23)	neutral(0.043)	HMMPfam_GCV_T,superfamily_Aminomethyltransferase folate-binding domain
DAG1	1605	genome.wustl.edu	37	3	49570027	49570027	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004393.4	+1	reviewed	p.A695T	0.034	23	4.3%	23	43.5%	65	43%	benign(0.004)	tolerated(0.61)	neutral(0.004)	HMMPfam_DAG1
BSN	8927	genome.wustl.edu	37	3	49691433	49691433	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003458.3	+1	reviewed	p.P1482T	1.000	64	0%	78	42.3%	0	-	probably_damaging(0.998)	-	-	NULL
BSN	8927	genome.wustl.edu	37	3	49695397	49695397	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003458.3	+1	reviewed	p.P2803H	1.000	44	0%	50	20%	1	0%	unknown(0)	-	-	NULL
BSN	8927	genome.wustl.edu	37	3	49700629	49700629	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003458.3	+1	reviewed	p.R3680W	1.000	13	0%	17	41.2%	3	0%	unknown(0)	-	-	NULL
RNF123	63891	genome.wustl.edu	37	3	49728901	49728901	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022064.2	+1	reviewed	p.I42	1.000	48	0%	33	48.5%	15	26.6%	-	-	-	NULL
RNF123	63891	genome.wustl.edu	37	3	49753064	49753064	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022064.2	+1	reviewed	p.P1023S	0.185	45	0%	74	25.7%	11	45.4%	benign(0.051)	tolerated(0.43)	neutral(0.017)	NULL
RNF123	63891	genome.wustl.edu	37	3	49753084	49753084	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022064.2	+1	reviewed	p.F1029	1.000	57	0%	81	50.6%	15	60%	-	-	-	NULL
IP6K1	9807	genome.wustl.edu	37	3	49765622	49765622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153273.3	-1	reviewed	p.A236T	1.000	9	0.000	10	0.700	32	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_IPK,superfamily_SAICAR synthase-like
TRAIP	10293	genome.wustl.edu	37	3	49867477	49867477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005879.2	-1	reviewed	p.K354N	0.961	161	0%	107	35.5%	10	10%	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	NULL
MST1R	4486	genome.wustl.edu	37	3	49936519	49936519	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002447.2	-1	validated	p.R470C	1.000	44	0%	51	43.1%	8	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
MST1R	4486	genome.wustl.edu	37	3	49940854	49940854	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002447.2	-1	validated	p.G63	0.001	24	0%	28	32.1%	8	50%	-	-	-	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
RBM6	10180	genome.wustl.edu	37	3	50005101	50005101	+	Silent	SNP	G	G	A	rs182256104	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005777.2	+1	validated	p.P81	0.069	91	0%	61	54.1%	11	45.4%	-	-	-	NULL
RBM6	10180	genome.wustl.edu	37	3	50005971	50005971	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005777.2	+1	validated	p.Q371	0.993	38	0%	37	48.6%	23	52.1%	-	-	-	NULL
RBM6	10180	genome.wustl.edu	37	3	50012815	50012815	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005777.2	+1	validated	p.E491	1.000	344	0%	177	42.9%	14	28.5%	-	-	-	HMMSmart_RRM,superfamily_SSF54928
RBM6	10180	genome.wustl.edu	37	3	50097091	50097091	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005777.2	+1	validated	p.R714C	1.000	146	0%	96	43.8%	40	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF54928
RBM6	10180	genome.wustl.edu	37	3	50107915	50107915	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005777.2	+1	validated	p.R1016C	1.000	166	0%	67	25.4%	51	21.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RBM5	10181	genome.wustl.edu	37	3	50143051	50143051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005778.1	+1	provisional	p.A255V	1.000	89	0%	48	37.5%	52	53.8%	benign(0.003)	tolerated(0.46)	neutral(0.012)	HMMSmart_SM00360,superfamily_RNA-binding domain RBD
GNAT1	2779	genome.wustl.edu	37	3	50230948	50230948	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000172.3	+1	reviewed	p.R101W	0.992	11	0%	15	26.7%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_G-alpha,superfamily_Transducn_insert,superfamily_SSF52540
GNAT1	2779	genome.wustl.edu	37	3	50230949	50230949	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000172.3	+1	reviewed	p.R101Q	1.000	11	0%	15	53.3%	0	-	benign(0.007)	tolerated(0.42)	neutral(0.014)	HMMPfam_G-alpha,superfamily_Transducn_insert,superfamily_SSF52540
SEMA3B	7869	genome.wustl.edu	37	3	50307705	50307705	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004636.2	+1	reviewed	p.G86R	0.955	16	0%	19	42.1%	8	12.5%	unknown(0)	-	-	NULL
SEMA3B	7869	genome.wustl.edu	37	3	50311428	50311428	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004636.2	+1	reviewed	p.R359M	1.000	13	0%	16	75%	12	58.3%	possibly_damaging(0.741)	-	-	NULL
HYAL3	8372	genome.wustl.edu	37	3	50332483	50332483	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003549.2	-1	reviewed	p.T184M	0.942	9	0.000	12	0.500	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_56,superfamily_(Trans)glycosidases
HYAL3	8372	genome.wustl.edu	37	3	50332729	50332729	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003549.2	-1	reviewed	p.D102G	0.000	35	0%	34	23.5%	2	50%	benign(0)	tolerated(0.39)	neutral(0.016)	HMMPfam_Glyco_hydro_56,superfamily_(Trans)glycosidases
HYAL1	3373	genome.wustl.edu	37	3	50339994	50339994	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007312.3	-1	reviewed	p.A132T	1.000	14	0%	15	33.3%	0	-	possibly_damaging(0.659)	tolerated(0.52)	neutral(0.241)	HMMPfam_Glyco_hydro_56,superfamily_(Trans)glycosidases
CACNA2D2	9254	genome.wustl.edu	37	3	50418454	50418454	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005505.1	-1	reviewed	p.S252	0.439	35	0%	28	53.6%	0	-	-	-	-	HMMPfam_VWA_N
DOCK3	1795	genome.wustl.edu	37	3	50971450	50971450	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004947.3	+1	validated	p.V86A	1.000	462	0%	252	43.3%	0	-	benign(0.314)	tolerated(0.07)	neutral(0.417)	NULL
DOCK3	1795	genome.wustl.edu	37	3	51198055	51198055	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004947.3	+1	validated	p.A320V	1.000	114	0%	47	42.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DOCK3	1795	genome.wustl.edu	37	3	51370620	51370620	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004947.3	+1	validated	p.R1183C	1.000	49	0%	43	32.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RBM15B	29890	genome.wustl.edu	37	3	51430237	51430237	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013286.3	+1	validated	p.A469	1.000	23	0%	18	27.8%	80	45%	-	-	-	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
RBM15B	29890	genome.wustl.edu	37	3	51430939	51430939	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013286.3	+1	validated	p.H703	0.000	51	2%	31	38.7%	56	48.2%	-	-	-	NULL
VPRBP	9730	genome.wustl.edu	37	3	51449893	51449893	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014703.2	-1	validated	p.C1331	1.000	122	0%	71	16.9%	38	18.4%	-	-	-	NULL
RAD54L2	23132	genome.wustl.edu	37	3	51677927	51677927	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015106.2	+1	validated	p.R796Q	1.000	136	0%	72	48.6%	3	66.6%	possibly_damaging(0.76)	tolerated(0.13)	deleterious(0.534)	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
PARP3	10039	genome.wustl.edu	37	3	51980337	51980337	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003931.2	+1	reviewed	p.E425D	1.000	24	0%	32	56.2%	11	27.2%	probably_damaging(0.994)	tolerated(0.05)	deleterious(0.797)	HMMPfam_PARP,superfamily_SSF56399
PCBP4	57060	genome.wustl.edu	37	3	51995220	51995220	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033008.2	-1	reviewed	p.E13*	1.000	7	0.000	16	0.250	57	35%	-	-	-	superfamily_Eukaryotic type KH-domain (KH-domain type I)
ACY1	95	genome.wustl.edu	37	3	52022998	52022998	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000666.1	+1	reviewed	p.R378	1.000	28	0%	35	37.1%	67	43.2%	-	-	-	HMMPfam_Peptidase_M20,superfamily_SSF53187
ALAS1	211	genome.wustl.edu	37	3	52237906	52237906	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000688.4	+1	validated	p.S152I	0.000	111	0%	52	36.5%	41	53.6%	benign(0.001)	tolerated(0.14)	neutral(0.249)	NULL
PPM1M	132160	genome.wustl.edu	37	3	52282677	52282677	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000457454	+1	known	p.R208Q	0.068	47	0%	43	16.3%	48	6.2%	-	-	-	superfamily_Protein serine/threonine phosphatase 2C catalytic domain
DNAH1	25981	genome.wustl.edu	37	3	52357843	52357843	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015512.4	+1	validated	p.R118Q	0.000	43	0%	50	40%	1	100%	benign(0.066)	tolerated(0.58)	neutral(0.009)	NULL
DNAH1	25981	genome.wustl.edu	37	3	52393971	52393971	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015512.4	+1	validated	p.R1483C	1.000	31	0%	48	56.2%	1	0%	benign(0.016)	deleterious(0.02)	neutral(0.384)	NULL
DNAH1	25981	genome.wustl.edu	37	3	52397079	52397079	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015512.4	+1	validated	p.S1721	1.000	74	0%	56	48.2%	3	33.3%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH1	25981	genome.wustl.edu	37	3	52414026	52414026	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015512.4	+1	validated	p.R2495C	0.000	35	0%	41	43.9%	5	60%	possibly_damaging(0.64)	deleterious(0.05)	deleterious(0.570)	superfamily_P-loop containing nucleoside triphosphate hydrolases
BAP1	8314	genome.wustl.edu	37	3	52437519	52437519	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004656.2	-1	reviewed	p.R548C	1.000	6	0.000	11	0.455	77	45.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SEMA3G	56920	genome.wustl.edu	37	3	52469648	52469648	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020163.1	-1	provisional	p.R774W	0.995	9	0.000	9	0.778	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NT5DC2	64943	genome.wustl.edu	37	3	52568576	52568576	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022908.2	-1	validated	p.R32C	0.001	29	0%	30	40%	2	0%	unknown(0)	-	-	NULL
GNL3	26354	genome.wustl.edu	37	3	52721604	52721604	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014366.4	+1	validated	p.K99	0.000	164	0%	99	22.2%	26	88.4%	-	-	-	NULL
ITIH3	3699	genome.wustl.edu	37	3	52830639	52830639	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002217.3	+1	validated	p.T86M	1.000	61	0%	78	44.9%	1	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMSmart_SM00609,HMMPfam_VIT
ITIH3	3699	genome.wustl.edu	37	3	52840399	52840399	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002217.3	+1	validated	p.R678H	1.000	29	0%	22	22.7%	1	0%	benign(0.026)	deleterious(0.01)	neutral(0.407)	NULL
ITIH4	3700	genome.wustl.edu	37	3	52860584	52860584	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441637	-1	known	p.P71S	0.994	34	0%	37	54.1%	0	-	-	-	-	NULL
ITIH4	3700	genome.wustl.edu	37	3	52863286	52863286	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002218.4	-1	reviewed	p.D34N	0.985	32	0%	30	50%	0	-	benign(0.056)	tolerated(0.13)	neutral(0.256)	HMMSmart_SM00609,HMMPfam_VIT
SFMBT1	51460	genome.wustl.edu	37	3	52941640	52941640	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005158.1	-1	reviewed	p.K672N	1.000	505	0%	210	46.2%	2	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
DCP1A	55802	genome.wustl.edu	37	3	53346310	53346310	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018403.5	-1	reviewed	p.I157	1.000	39	0%	32	46.9%	5	20%	-	-	-	NULL
CACNA1D	776	genome.wustl.edu	37	3	53757669	53757669	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000720.2	+1	validated	p.R645S	0.004	170	0%	134	39.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
CACNA1D	776	genome.wustl.edu	37	3	53757882	53757882	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000720.2	+1	validated	p.S672	0.036	221	0.5%	138	43.5%	1	0%	-	-	-	HMMPfam_Ion_trans,superfamily_SSF81324
CACNA1D	776	genome.wustl.edu	37	3	53761026	53761026	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000720.2	+1	validated	p.Y761H	1.000	190	0%	98	19.4%	2	100%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Ion_trans,superfamily_SSF81324
CACNA1D	776	genome.wustl.edu	37	3	53810892	53810892	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000720.2	+1	validated	p.R1519M	1.000	165	0%	116	46.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CACNA1D	776	genome.wustl.edu	37	3	53835225	53835225	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000720.2	+1	validated	p.P1747	0.964	93	0%	56	41.1%	0	-	-	-	-	NULL
CACNA1D	776	genome.wustl.edu	37	3	53844195	53844195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000720.2	+1	validated	p.R2041H	1.000	11	0%	25	40%	1	100%	possibly_damaging(0.891)	tolerated(0.12)	deleterious(0.611)	NULL
ACTR8	93973	genome.wustl.edu	37	3	53902824	53902824	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022899.4	-1	validated	p.Q599H	1.000	66	0%	55	36.4%	16	50%	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
ACTR8	93973	genome.wustl.edu	37	3	53907174	53907174	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000231909	-1	known	e3-1	0.092	115	0%	58	53.4%	0	-	-	-	-	-
CACNA2D3	55799	genome.wustl.edu	37	3	54676214	54676214	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018398.2	+1	reviewed	p.G371	0.955	83	0%	67	40.3%	0	-	-	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
WNT5A	7474	genome.wustl.edu	37	3	55504144	55504144	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000442038	-1	known	p.R106C	0.995	17	0%	17	23.5%	10	0%	unknown(0)	deleterious(0)	-	NULL
ERC2	26059	genome.wustl.edu	37	3	56468597	56468597	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015576.1	-1	validated	p.M147L	0.999	168	0%	87	43.7%	2	50%	benign(0)	tolerated(0.3)	neutral(0.029)	NULL
SPATA12	353324	genome.wustl.edu	37	3	57107903	57107903	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181727.1	+1	provisional	p.P61S	0.001	61	0%	53	47.2%	0	-	possibly_damaging(0.688)	-	-	NULL
IL17RD	54756	genome.wustl.edu	37	3	57132450	57132450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017563.3	-1	validated	p.K427N	1.000	101	0%	65	56.9%	3	66.6%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_SEFIR
IL17RD	54756	genome.wustl.edu	37	3	57135370	57135370	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017563.3	-1	validated	p.D334G	1.000	95	0%	50	44%	9	44.4%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
APPL1	26060	genome.wustl.edu	37	3	57294726	57294726	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012096.2	+1	reviewed	p.R589Q	1.000	347	0%	161	44.1%	24	45.8%	benign(0.017)	tolerated(0.27)	neutral(0.034)	HMMPfam_PID,superfamily_SSF50729
DNAH12	201625	genome.wustl.edu	37	3	57327968	57327968	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000462199	-1	known	p.L731I	0.988	189	0%	68	50%	0	-	-	-	-	HMMPfam_Dynein_heavy
DNAH12	201625	genome.wustl.edu	37	3	57343878	57343878	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178504.4	-1	validated	p.L2766P	1.000	196	0%	88	42%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Dynein_heavy
DNAH12	201625	genome.wustl.edu	37	3	57454591	57454591	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178504.4	-1	validated	p.E741*	1.000	622	0%	161	35.4%	0	-	-	-	-	HMMPfam_DHC_N2
PDE12	201626	genome.wustl.edu	37	3	57542542	57542542	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177966.5	+1	validated	p.A146T	1.000	6	0.000	8	0.625	12	33.3%	possibly_damaging(0.616)	tolerated(0.21)	neutral(0.259)	NULL
ARF4	378	genome.wustl.edu	37	3	57557970	57557970	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001660.3	-1	reviewed	p.D171G	1.000	237	0%	90	46.7%	331	49.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00175,HMMSmart_SM00178,HMMSmart_SM00177,PatternScan_ARF,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
FLNB	2317	genome.wustl.edu	37	3	58092568	58092568	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001457.3	+1	reviewed	p.H637N	1.000	38	0%	24	45.8%	34	61.7%	benign(0.413)	tolerated(0.55)	neutral(0.141)	HMMSmart_IG_FLMN
FLNB	2317	genome.wustl.edu	37	3	58107164	58107164	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001457.3	+1	reviewed	p.Y1020	0.787	21	0%	14	42.9%	54	40.7%	-	-	-	HMMSmart_IG_FLMN,superfamily_Ig_E-set,HMMPfam_Filamin
FLNB	2317	genome.wustl.edu	37	3	58116622	58116622	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001457.3	+1	reviewed	p.V1459	0.001	8	0.000	10	0.500	54	50%	-	-	-	HMMSmart_IG_FLMN,superfamily_Ig_E-set,HMMPfam_Filamin
FLNB	2317	genome.wustl.edu	37	3	58134407	58134407	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001457.3	+1	reviewed	p.E1973D	0.976	30	0%	24	58.3%	72	45.8%	benign(0.027)	tolerated(0.1)	neutral(0.288)	HMMSmart_IG_FLMN,superfamily_Ig_E-set,HMMPfam_Filamin
PXK	54899	genome.wustl.edu	37	3	58368296	58368296	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017771.3	+1	provisional	p.R86H	1.000	225	0%	115	41.7%	4	0%	probably_damaging(0.997)	tolerated(0.1)	deleterious(0.752)	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain
PXK	54899	genome.wustl.edu	37	3	58376386	58376386	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017771.3	+1	provisional	p.G156C	1.000	179	0%	92	45.7%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KCTD6	200845	genome.wustl.edu	37	3	58486885	58486885	+	Silent	SNP	G	G	A	rs189292002	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128214.1	+1	validated	p.P80	0.365	156	0%	71	22.5%	12	16.6%	-	-	-	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
ACOX2	8309	genome.wustl.edu	37	3	58510177	58510177	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003500.3	-1	reviewed	p.T501M	0.076	17	0%	14	42.9%	3	33.3%	probably_damaging(0.973)	tolerated(0.1)	deleterious(0.702)	HMMPfam_ACOX,superfamily_AcylCoADH_C_like
ACOX2	8309	genome.wustl.edu	37	3	58519173	58519173	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003500.3	-1	reviewed	p.D194	0.878	89	0%	71	42.3%	1	100%	-	-	-	HMMPfam_Acyl-CoA_dh_M,superfamily_AcylCoA_dehyd_NM
FAM3D	131177	genome.wustl.edu	37	3	58620023	58620023	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138805.2	-1	validated	p.P220S	0.942	76	0%	65	47.7%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM3D	131177	genome.wustl.edu	37	3	58622064	58622064	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138805.2	-1	validated	p.F181C	0.999	109	0%	65	43.1%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM3D	131177	genome.wustl.edu	37	3	58631268	58631268	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138805.2	-1	validated	p.V77	0.868	29	0%	34	44.1%	10	40%	-	-	-	NULL
C3orf67	200844	genome.wustl.edu	37	3	58849439	58849439	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198463.2	-1	validated	p.F355L	0.995	187	0%	88	35.2%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
PTPRG	5793	genome.wustl.edu	37	3	62180831	62180831	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002841.3	+1	reviewed	p.T438	0.003	64	0%	53	41.5%	23	52.1%	-	-	-	superfamily_Fibronectin type III
CADPS	8618	genome.wustl.edu	37	3	62459984	62459984	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003716.3	-1	reviewed	p.A1114V	1.000	238	0.4%	95	30.5%	1	0%	probably_damaging(0.996)	tolerated(0.1)	deleterious(0.748)	NULL
CADPS	8618	genome.wustl.edu	37	3	62570868	62570868	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003716.3	-1	reviewed	p.K523N	1.000	343	0%	177	39.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
SYNPR	132204	genome.wustl.edu	37	3	63542291	63542291	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130003.1	+1	validated	p.D94	1.000	85	0%	54	44.4%	0	-	-	-	-	HMMPfam_MARVEL
SNTN	132203	genome.wustl.edu	37	3	63638398	63638398	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080537.1	+1	provisional	p.S12Y	0.001	62	0%	25	56%	0	-	benign(0.092)	deleterious(0.03)	neutral(0.371)	NULL
THOC7	80145	genome.wustl.edu	37	3	63820874	63820874	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025075.2	-1	validated	p.H168R	0.996	333	0%	98	37.8%	132	47.7%	possibly_damaging(0.948)	tolerated(0.1)	deleterious(0.677)	NULL
ADAMTS9	56999	genome.wustl.edu	37	3	64608122	64608122	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182920.1	-1	reviewed	p.R844C	1.000	215	0%	84	50%	18	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ADAM_spacer1
LRIG1	26018	genome.wustl.edu	37	3	66502037	66502037	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015541.2	-1	validated	p.L104S	0.984	117	0%	62	38.7%	70	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
SUCLG2	8801	genome.wustl.edu	37	3	67426254	67426254	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003848.3	-1	reviewed	p.L405I	0.902	100	0%	41	46.3%	27	44.4%	benign(0.039)	tolerated(1)	neutral(0.002)	HMMPfam_Ligase_CoA,superfamily_CoA_ligase
C3orf64	285203	genome.wustl.edu	37	3	69027512	69027512	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173654.1	-1	provisional	p.R386Q	0.992	201	0%	89	15.7%	7	14.2%	benign(0.001)	tolerated(0.63)	neutral(0.004)	NULL
TMF1	7110	genome.wustl.edu	37	3	69097037	69097037	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007114.2	-1	validated	p.A273	0.833	68	0%	38	47.4%	17	29.4%	-	-	-	NULL
LMOD3	56203	genome.wustl.edu	37	3	69168513	69168513	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198271.3	-1	validated	p.M331I	1.000	186	0%	90	37.8%	0	-	benign(0.354)	tolerated(0.8)	neutral(0.113)	HMMPfam_Tropomodulin,superfamily_RNI-like
FRMD4B	23150	genome.wustl.edu	37	3	69247863	69247863	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015123.1	-1	validated	p.V313	0.998	273	0%	104	13.5%	4	0%	-	-	-	HMMPfam_FERM_C,superfamily_PH domain-like
MITF	4286	genome.wustl.edu	37	3	69813040	69813040	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006722.2	+1	reviewed	p.F16L	0.001	268	0.4%	96	42.7%	0	-	benign(0.009)	-	-	NULL
MITF	4286	genome.wustl.edu	37	3	70005628	70005628	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198159.2	+1	reviewed	p.N320	1.000	250	0%	93	40.9%	2	50%	-	-	-	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
FOXP1	27086	genome.wustl.edu	37	3	71015130	71015130	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032682.4	-1	reviewed	p.S600	0.992	140	0%	93	41.9%	14	35.7%	-	-	-	NULL
FOXP1	27086	genome.wustl.edu	37	3	71026983	71026983	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000318796	-1	known	p.V348I	1.000	152	0%	101	41.6%	9	66.6%	benign(0.164)	deleterious(0)	neutral(0.460)	NULL
RYBP	23429	genome.wustl.edu	37	3	72495648	72495648	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000477973	-1	known	p.Q141P	1.000	56	0%	79	41.8%	32	40.6%	-	-	-	NULL
RYBP	23429	genome.wustl.edu	37	3	72495823	72495823	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000477973	-1	known	p.L83M	0.995	64	0%	64	10.9%	0	-	-	-	-	NULL
SHQ1	55164	genome.wustl.edu	37	3	72866502	72866502	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018130.2	-1	validated	p.R254Q	1.000	162	0%	74	43.2%	13	46.1%	possibly_damaging(0.885)	tolerated(0.09)	deleterious(0.642)	HMMPfam_SHQ1
GXYLT2	727936	genome.wustl.edu	37	3	73016825	73016825	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080393.1	+1	provisional	p.D368	0.649	106	0%	56	44.6%	29	48.2%	-	-	-	HMMPfam_Glyco_transf_8,superfamily_SSF53448
EBLN2	55096	genome.wustl.edu	37	3	73111684	73111684	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018029.3	+1	provisional	p.T151N	0.001	169	0%	73	41.1%	2	50%	benign(0.007)	deleterious(0.01)	neutral(0.406)	HMMPfam_BDV_P40,superfamily_P40_nucleoprot_BD-vir
PDZRN3	23024	genome.wustl.edu	37	3	73440208	73440208	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000494559	-1	known	p.G35E	0.999	127	0%	92	38%	21	47.6%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
PDZRN3	23024	genome.wustl.edu	37	3	73453312	73453312	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015009.1	-1	provisional	p.L385I	1.000	117	0%	62	51.6%	17	17.6%	possibly_damaging(0.945)	tolerated(0.05)	deleterious(0.735)	superfamily_PDZ domain-like
CNTN3	5067	genome.wustl.edu	37	3	74334530	74334530	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020872.1	-1	validated	p.T877M	0.945	107	0%	40	17.5%	10	10%	probably_damaging(0.968)	deleterious(0.02)	deleterious(0.793)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
ROBO2	6092	genome.wustl.edu	37	3	77614245	77614245	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002942.3	+1	reviewed	p.P608H	1.000	73	0%	17	29.4%	26	57.6%	possibly_damaging(0.583)	deleterious(0)	deleterious(0.645)	superfamily_Fibronectin type III
ROBO2	6092	genome.wustl.edu	37	3	77617532	77617532	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002942.3	+1	reviewed	p.R640C	1.000	79	0%	24	37.5%	25	36%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00060,superfamily_Fibronectin type III
ROBO2	6092	genome.wustl.edu	37	3	77651546	77651546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002942.3	+1	reviewed	p.D1014N	1.000	149	0%	99	50.5%	26	38.4%	possibly_damaging(0.894)	deleterious(0.01)	deleterious(0.758)	NULL
ROBO2	6092	genome.wustl.edu	37	3	77684173	77684173	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002942.3	+1	reviewed	p.R1305*	1.000	147	0%	83	38.6%	17	5.8%	-	-	-	NULL
ROBO1	6091	genome.wustl.edu	37	3	78763644	78763644	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002941.3	-1	reviewed	p.K316N	1.000	157	0%	67	47.8%	7	42.8%	benign(0.097)	tolerated(0.18)	neutral(0.064)	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
GBE1	2632	genome.wustl.edu	37	3	81627217	81627217	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000264326	-1	known	p.W493R	1.000	198	0%	70	35.7%	43	41.8%	benign(0.041)	tolerated(0.56)	neutral(0.009)	HMMSmart_SM00642,superfamily_(Trans)glycosidases
CGGBP1	8545	genome.wustl.edu	37	3	88105001	88105001	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008390.1	-1	validated	p.F42	1.000	32	0%	38	52.6%	39	51.2%	-	-	-	NULL
ARL13B	200894	genome.wustl.edu	37	3	93722607	93722607	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182896.2	+1	reviewed	p.R79W	1.000	558	0%	189	40.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
DHFRL1	200895	genome.wustl.edu	37	3	93780084	93780084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176815.3	-1	provisional	p.A91V	0.997	471	0%	239	43.9%	2	0%	benign(0.296)	deleterious(0.02)	deleterious(0.475)	HMMPfam_DHFR_1,superfamily_SSF53597
EPHA6	285220	genome.wustl.edu	37	3	96963044	96963044	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080448.2	+1	provisional	p.F507L	1.000	144	0%	59	40.7%	1	0%	probably_damaging(0.988)	tolerated(0.05)	deleterious(0.783)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
EPHA6	285220	genome.wustl.edu	37	3	97251319	97251319	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080448.2	+1	provisional	p.R773T	1.000	207	0.5%	47	34%	0	-	possibly_damaging(0.845)	tolerated(0.35)	neutral(0.345)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
EPHA6	285220	genome.wustl.edu	37	3	97454866	97454866	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080448.2	+1	provisional	p.R1011I	1.000	83	0%	27	44.4%	0	-	possibly_damaging(0.892)	deleterious(0)	deleterious(0.796)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
CRYBG3	131544	genome.wustl.edu	37	3	97596359	97596359	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153605.2	+1	validated	p.H159	0.784	56	0%	26	50%	6	50%	-	-	-	NULL
CRYBG3	131544	genome.wustl.edu	37	3	97596571	97596571	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153605.2	+1	validated	p.P230H	0.005	109	0%	41	43.9%	5	60%	benign(0)	deleterious(0)	neutral(0.445)	NULL
CRYBG3	131544	genome.wustl.edu	37	3	97618060	97618060	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153605.2	+1	validated	p.W694G	1.000	236	0%	77	40.3%	7	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Crystall,HMMSmart_SM00247,superfamily_gamma-Crystallin-like
OR5K2	402135	genome.wustl.edu	37	3	98216965	98216965	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004737.1	+1	provisional	p.G147	0.009	302	0%	116	43.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR5K2	402135	genome.wustl.edu	37	3	98217085	98217085	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004737.1	+1	provisional	p.L187	0.996	615	0%	174	44.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CLDND1	56650	genome.wustl.edu	37	3	98235543	98235543	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040182.1	-1	validated	p.R264Q	1.000	127	0%	94	48.9%	40	25%	probably_damaging(0.994)	tolerated(0.13)	deleterious(0.705)	NULL
DCBLD2	131566	genome.wustl.edu	37	3	98541085	98541085	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080927.3	-1	validated	p.V273I	1.000	99	0%	58	51.7%	14	14.2%	possibly_damaging(0.72)	tolerated(0.36)	neutral(0.281)	HMMPfam_LCCL,HMMSmart_SM00603,superfamily_LCCL domain
DCBLD2	131566	genome.wustl.edu	37	3	98568386	98568386	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080927.3	-1	validated	p.E164*	1.000	254	0%	129	42.6%	10	40%	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
DCBLD2	131566	genome.wustl.edu	37	3	98600612	98600612	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080927.3	-1	validated	e2-1	1.000	109	0%	65	40%	0	-	-	-	-	-
COL8A1	1295	genome.wustl.edu	37	3	99513757	99513757	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001850.3	+1	reviewed	p.L338V	0.053	19	0%	22	36.4%	28	46.4%	unknown(0)	tolerated(0.38)	-	NULL
FILIP1L	11259	genome.wustl.edu	37	3	99569190	99569190	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182909.2	-1	validated	p.L444	1.000	279	0%	97	34%	2	0%	-	-	-	HMMPfam_CortBP2
TBC1D23	55773	genome.wustl.edu	37	3	100034991	100034991	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018309.2	+1	validated	p.K534N	1.000	163	0%	80	42.5%	22	27.2%	probably_damaging(0.982)	tolerated(0.12)	deleterious(0.687)	NULL
NIT2	56954	genome.wustl.edu	37	3	100073656	100073656	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020202.4	+1	validated	p.V242M	0.374	231	0.4%	89	36%	45	42.2%	possibly_damaging(0.827)	deleterious(0)	deleterious(0.758)	superfamily_Ntlse/CNhydtse
GPR128	84873	genome.wustl.edu	37	3	100365442	100365442	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032787.2	+1	validated	p.S380	0.899	159	0%	83	47%	0	-	-	-	-	HMMPfam_GPS,HMMSmart_GPS
GPR128	84873	genome.wustl.edu	37	3	100413792	100413792	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032787.2	+1	validated	p.S781R	0.000	126	0%	84	42.9%	0	-	benign(0.158)	deleterious(0.05)	neutral(0.359)	NULL
ABI3BP	25890	genome.wustl.edu	37	3	100494104	100494104	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000495591	-1	known	p.E815*	0.000	196	0%	82	56.1%	1	0%	probably_damaging(0.986)	deleterious(0.04)	deleterious(0.783)	NULL
ABI3BP	25890	genome.wustl.edu	37	3	100617677	100617677	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015429.3	-1	validated	p.V137	0.999	53	0%	35	51.4%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
IMPG2	50939	genome.wustl.edu	37	3	100963443	100963443	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016247.2	-1	validated	p.D578Y	0.012	187	0%	71	49.3%	1	100%	possibly_damaging(0.46)	deleterious(0.01)	deleterious(0.556)	NULL
IMPG2	50939	genome.wustl.edu	37	3	100976388	100976388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016247.2	-1	validated	p.L380M	1.000	96	0%	29	58.6%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
IMPG2	50939	genome.wustl.edu	37	3	101023111	101023111	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016247.2	-1	validated	p.R127Q	1.000	161	0%	85	17.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SENP7	57337	genome.wustl.edu	37	3	101066774	101066774	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020654.3	-1	validated	p.S593	0.961	299	0%	97	49.5%	3	66.6%	-	-	-	NULL
SENP7	57337	genome.wustl.edu	37	3	101090920	101090920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020654.3	-1	validated	p.A243V	0.000	332	0%	118	18.6%	8	25%	benign(0.079)	deleterious(0)	neutral(0.450)	NULL
ZBTB11	27107	genome.wustl.edu	37	3	101370427	101370427	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014415.3	-1	validated	p.V915	1.000	92	0%	69	31.9%	18	44.4%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZBTB11	27107	genome.wustl.edu	37	3	101390102	101390102	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014415.3	-1	validated	p.T217I	1.000	258	0%	100	42%	5	60%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB
FAM55C	91775	genome.wustl.edu	37	3	101540612	101540612	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134456.1	+1	validated	p.S498	0.302	25	0%	34	41.2%	4	25%	-	-	-	NULL
NFKBIZ	64332	genome.wustl.edu	37	3	101573480	101573480	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031419.2	+1	reviewed	p.K466Q	1.000	223	0%	140	47.9%	8	12.5%	benign(0.351)	tolerated(0.1)	neutral(0.397)	HMMSmart_SM00248,superfamily_Ankyrin repeat
ALCAM	214	genome.wustl.edu	37	3	105264165	105264165	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001627.2	+1	validated	p.V364M	1.000	274	0%	83	47%	69	42%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
CBLB	868	genome.wustl.edu	37	3	105400406	105400406	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170662.3	-1	validated	p.R782M	1.000	172	0%	92	39.1%	43	41.8%	probably_damaging(0.991)	tolerated(0.05)	deleterious(0.789)	NULL
BBX	56987	genome.wustl.edu	37	3	107447622	107447622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142568.1	+1	validated	p.A139V	1.000	211	0%	35	48.6%	11	54.5%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
BBX	56987	genome.wustl.edu	37	3	107451854	107451854	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142568.1	+1	validated	p.A218V	1.000	363	0%	130	39.2%	22	40.9%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_DUF2028
CD47	961	genome.wustl.edu	37	3	107770795	107770795	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001777.3	-1	reviewed	p.Q300H	0.926	347	0%	131	43.5%	53	39.6%	unknown(0)	-	-	HMMPfam_CD47
CD47	961	genome.wustl.edu	37	3	107799078	107799078	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001777.3	-1	reviewed	p.V54I	0.011	478	0%	113	40.7%	57	61.4%	benign(0.065)	tolerated(0.38)	neutral(0.022)	HMMPfam_V-set_CD47
IFT57	55081	genome.wustl.edu	37	3	107932786	107932786	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018010.3	-1	validated	p.E193*	1.000	832	0%	399	39.1%	17	5.8%	-	-	-	HMMPfam_IFT57
MYH15	22989	genome.wustl.edu	37	3	108129494	108129494	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014981.1	-1	validated	p.K1497N	0.998	32	0%	35	34.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_tail_1
MYH15	22989	genome.wustl.edu	37	3	108156433	108156433	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014981.1	-1	validated	p.S1083	1.000	319	0%	146	39%	0	-	-	-	-	HMMPfam_Myosin_tail_1
TRAT1	50852	genome.wustl.edu	37	3	108572511	108572511	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016388.2	+1	validated	p.S116	0.015	166	0%	54	38.9%	1	0%	-	-	-	NULL
GUCA1C	9626	genome.wustl.edu	37	3	108634947	108634947	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000393963	-1	known	p.T157A	0.000	268	0%	112	18.8%	0	-	probably_damaging(0.967)	-	-	NULL
MORC1	27136	genome.wustl.edu	37	3	108677858	108677858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014429.3	-1	reviewed	p.R970I	0.000	269	0%	68	35.3%	0	-	benign(0.303)	deleterious(0.02)	deleterious(0.477)	NULL
MORC1	27136	genome.wustl.edu	37	3	108677919	108677919	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014429.3	-1	reviewed	p.L950	1.000	163	0%	48	47.9%	0	-	-	-	-	NULL
MORC1	27136	genome.wustl.edu	37	3	108698431	108698431	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014429.3	-1	reviewed	p.A803G	0.000	185	0%	93	38.7%	0	-	benign(0)	tolerated(0.2)	neutral(0.049)	NULL
MORC1	27136	genome.wustl.edu	37	3	108698476	108698476	+	Missense_Mutation	SNP	G	G	T	rs115431705	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014429.3	-1	reviewed	p.S788Y	0.741	156	0%	86	41.9%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
MORC1	27136	genome.wustl.edu	37	3	108773716	108773716	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014429.3	-1	reviewed	p.V397M	0.995	301	0%	101	35.6%	0	-	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	NULL
MORC1	27136	genome.wustl.edu	37	3	108818291	108818291	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014429.3	-1	reviewed	p.D113Y	1.000	606	0%	143	36.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
DPPA4	55211	genome.wustl.edu	37	3	109056358	109056358	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018189.3	-1	validated	p.R3*	0.000	115	0.9%	71	32.4%	0	-	-	-	-	NULL
PVRL3	25945	genome.wustl.edu	37	3	110863836	110863836	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000493615	+1	known	p.T364I	1.000	74	0%	27	37%	1	0%	benign(0.101)	tolerated(0.4)	neutral(0.024)	NULL
CD96	10225	genome.wustl.edu	37	3	111264037	111264037	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198196.2	+1	reviewed	p.A69D	0.331	148	0%	57	45.6%	4	25%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
PLCXD2	257068	genome.wustl.edu	37	3	111427053	111427053	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153268.3	+1	validated	p.S148	0.004	110	0%	42	47.6%	1	100%	-	-	-	superfamily_PLC-like_Pdiesterase_TIM-brl
PHLDB2	90102	genome.wustl.edu	37	3	111672865	111672865	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134438.1	+1	validated	p.R954M	1.000	58	0%	24	54.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TMPRSS7	344805	genome.wustl.edu	37	3	111782417	111782417	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042575.2	+1	validated	p.P372L	1.000	353	0%	202	42.6%	0	-	benign(0)	tolerated(0.17)	neutral(0.059)	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module
CD200	4345	genome.wustl.edu	37	3	112066668	112066668	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004196.2	+1	reviewed	p.V254I	0.000	48	0%	24	25%	19	26.3%	benign(0.006)	tolerated(0.12)	neutral(0.261)	superfamily_SSF48726
CD200R1L	344807	genome.wustl.edu	37	3	112546460	112546460	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008784.2	-1	validated	p.L62V	0.000	330	0%	171	39.8%	0	-	benign(0.002)	tolerated(1)	-	superfamily_Immunoglobulin
BOC	91653	genome.wustl.edu	37	3	112969572	112969572	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033254.2	+1	validated	p.T90A	0.980	59	0%	52	46.2%	32	53.1%	possibly_damaging(0.466)	deleterious(0.03)	deleterious(0.517)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
BOC	91653	genome.wustl.edu	37	3	112993272	112993272	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033254.2	+1	validated	p.P429S	0.140	10	0%	12	33.3%	13	61.5%	benign(0)	tolerated(0.55)	neutral(0.007)	NULL
WDR52	55779	genome.wustl.edu	37	3	113010506	113010506	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000465636	-1	known	p.G958S	0.000	157	0%	76	42.1%	10	40%	-	-	-	NULL
SIDT1	54847	genome.wustl.edu	37	3	113311862	113311862	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017699.2	+1	validated	p.K338Q	0.998	356	0%	180	14.4%	0	-	benign(0.004)	deleterious(0.03)	neutral(0.364)	NULL
KIAA2018	205717	genome.wustl.edu	37	3	113378178	113378178	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009899.2	-1	validated	p.V784A	0.008	222	0%	90	12.2%	2	50%	benign(0.001)	tolerated(0.21)	neutral(0.044)	NULL
ATP6V1A	523	genome.wustl.edu	37	3	113517163	113517163	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001690.2	+1	reviewed	p.S455N	1.000	192	0%	111	36%	32	43.7%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_ATP-synt_ab,PatternScan_ATPASE_ALPHA_BETA,superfamily_P-loop containing nucleoside triphosphate hydrolases
GRAMD1C	54762	genome.wustl.edu	37	3	113563349	113563349	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017577.4	+1	validated	e2-1	0.882	299	0%	161	42.9%	0	-	-	-	-	-
ZDHHC23	254887	genome.wustl.edu	37	3	113667754	113667754	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173570.3	+1	validated	p.K35N	1.000	267	0%	191	42.9%	2	50%	possibly_damaging(0.849)	deleterious(0.02)	deleterious(0.709)	NULL
KIAA1407	57577	genome.wustl.edu	37	3	113723501	113723501	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020817.1	-1	predicted	p.P654L	0.038	236	0%	88	47.7%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DRD3	1814	genome.wustl.edu	37	3	113850124	113850124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000796.3	-1	reviewed	p.R283W	0.003	236	0%	113	39.8%	0	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZNF80	7634	genome.wustl.edu	37	3	113955493	113955493	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007136.3	-1	validated	p.S143	0.000	79	0%	52	23.1%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZBTB20	26137	genome.wustl.edu	37	3	114057884	114057884	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015642.4	-1	validated	p.D659N	1.000	28	0%	32	50%	1	100%	possibly_damaging(0.873)	tolerated(0.11)	deleterious(0.611)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
LSAMP	4045	genome.wustl.edu	37	3	116163741	116163741	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002338.3	-1	reviewed	p.G46	1.000	24	0%	18	44.4%	0	-	-	-	-	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
ARHGAP31	57514	genome.wustl.edu	37	3	119120969	119120969	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020754.2	+1	reviewed	p.S457L	0.998	33	0%	38	31.6%	1	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
ARHGAP31	57514	genome.wustl.edu	37	3	119128358	119128358	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020754.2	+1	reviewed	p.K554T	0.999	60	0%	37	45.9%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
TMEM39A	55254	genome.wustl.edu	37	3	119155679	119155679	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018266.1	-1	provisional	p.Q357	1.000	58	0%	30	50%	48	39.5%	-	-	-	HMMPfam_Tmp39
POGLUT1	56983	genome.wustl.edu	37	3	119205772	119205772	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152305.2	+1	validated	p.S244Y	1.000	209	0%	87	41.4%	8	50%	possibly_damaging(0.877)	tolerated(0.16)	neutral(0.401)	HMMSmart_SM00672,HMMPfam_DUF821
TIMMDC1	51300	genome.wustl.edu	37	3	119219564	119219564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016589.3	+1	validated	p.D73N	1.000	234	0%	110	37.3%	69	47.8%	benign(0.069)	deleterious(0)	neutral(0.449)	NULL
CD80	941	genome.wustl.edu	37	3	119256154	119256154	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005191.3	-1	validated	p.E177G	1.000	124	0%	45	44.4%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_C2-set_2,superfamily_Immunoglobulin
POPDC2	64091	genome.wustl.edu	37	3	119379025	119379025	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022135.2	-1	reviewed	p.F82	0.975	42	0%	28	53.6%	1	0%	-	-	-	NULL
C3orf15	89876	genome.wustl.edu	37	3	119449080	119449080	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033364.3	+1	validated	p.R292C	1.000	232	0%	110	46.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GSK3B	2932	genome.wustl.edu	37	3	119624629	119624629	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002093.3	-1	reviewed	p.G262	0.984	465	0%	171	42.7%	22	50%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
GSK3B	2932	genome.wustl.edu	37	3	119634964	119634964	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002093.3	-1	reviewed	p.H179N	1.000	155	0%	72	45.8%	15	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_Pkinase
GSK3B	2932	genome.wustl.edu	37	3	119666149	119666149	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002093.3	-1	reviewed	p.R111Q	1.000	248	0%	104	45.2%	20	45%	benign(0.36)	tolerated(0.48)	neutral(0.125)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
GPR156	165829	genome.wustl.edu	37	3	119886274	119886274	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153002.2	-1	validated	p.E684*	0.055	17	0%	11	36.4%	0	-	-	-	-	NULL
GPR156	165829	genome.wustl.edu	37	3	119887175	119887175	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153002.2	-1	validated	p.I383	0.566	24	0%	24	29.2%	0	-	-	-	-	NULL
GPR156	165829	genome.wustl.edu	37	3	119912217	119912217	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153002.2	-1	validated	p.C96	1.000	166	0%	70	35.7%	2	0%	-	-	-	HMMPfam_7tm_3
STXBP5L	9515	genome.wustl.edu	37	3	120976036	120976036	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014980.2	+1	validated	p.V563A	0.998	232	0%	102	43.1%	1	100%	benign(0.019)	tolerated(0.08)	neutral(0.301)	NULL
GOLGB1	2804	genome.wustl.edu	37	3	121386961	121386961	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004487.3	-1	validated	p.K3117N	1.000	263	0%	110	42.7%	30	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GOLGB1	2804	genome.wustl.edu	37	3	121411334	121411334	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004487.3	-1	validated	p.E2288*	1.000	241	0%	118	47.5%	23	17.3%	-	-	-	HMMSmart_SM00340
GOLGB1	2804	genome.wustl.edu	37	3	121413932	121413932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004487.3	-1	validated	p.R1808I	0.002	238	0%	116	45.7%	20	30%	possibly_damaging(0.929)	deleterious(0.04)	deleterious(0.725)	NULL
GOLGB1	2804	genome.wustl.edu	37	3	121415055	121415055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004487.3	-1	validated	p.D1434Y	0.974	295	0%	128	41.4%	9	22.2%	possibly_damaging(0.509)	deleterious(0.01)	deleterious(0.576)	superfamily_Prefoldin
GOLGB1	2804	genome.wustl.edu	37	3	121421433	121421433	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004487.3	-1	validated	p.E467K	0.977	238	0%	69	34.8%	10	80%	probably_damaging(0.987)	tolerated(0.06)	deleterious(0.759)	NULL
CASR	846	genome.wustl.edu	37	3	121980495	121980495	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000388.3	+1	reviewed	p.R205C	1.000	60	0%	53	52.8%	0	-	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
CASR	846	genome.wustl.edu	37	3	121981125	121981125	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000388.3	+1	reviewed	p.R415W	1.000	132	0.8%	73	47.9%	0	-	possibly_damaging(0.501)	deleterious(0)	deleterious(0.612)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
CASR	846	genome.wustl.edu	37	3	122003185	122003185	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000388.3	+1	reviewed	p.R795Q	1.000	28	0%	23	39.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_3
CASR	846	genome.wustl.edu	37	3	122003473	122003473	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000388.3	+1	reviewed	p.R891H	1.000	12	0%	16	50%	0	-	benign(0.016)	tolerated(0.28)	neutral(0.032)	NULL
CASR	846	genome.wustl.edu	37	3	122003845	122003845	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000388.3	+1	reviewed	p.P1015L	0.998	43	0%	41	31.7%	0	-	benign(0.141)	deleterious(0)	neutral(0.457)	NULL
KPNA1	3836	genome.wustl.edu	37	3	122145778	122145778	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026698.1	-1	reviewed	NULL	1.000	70	0%	46	50%	23	39.1%	-	-	-	-
PARP9	83666	genome.wustl.edu	37	3	122259555	122259555	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031458.2	-1	validated	p.I545T	0.024	172	0%	117	41.9%	10	20%	benign(0.004)	deleterious(0.01)	neutral(0.406)	NULL
DTX3L	151636	genome.wustl.edu	37	3	122288250	122288250	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138287.3	+1	validated	p.I438	0.028	126	0%	72	37.5%	11	63.6%	-	-	-	NULL
DTX3L	151636	genome.wustl.edu	37	3	122288533	122288533	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138287.3	+1	validated	p.D533N	0.000	105	0%	60	35%	6	16.6%	benign(0.001)	tolerated(0.34)	neutral(0.023)	NULL
HSPBAP1	79663	genome.wustl.edu	37	3	122459317	122459317	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024610.4	-1	provisional	p.I448V	0.000	301	0%	160	26.9%	4	0%	benign(0)	tolerated(0.95)	-	NULL
HSPBAP1	79663	genome.wustl.edu	37	3	122459660	122459660	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024610.4	-1	provisional	p.F333	0.004	227	0%	94	48.9%	6	66.6%	-	-	-	NULL
SEMA5B	54437	genome.wustl.edu	37	3	122646785	122646785	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031702.2	-1	validated	p.R234	0.698	24	0%	34	52.9%	2	100%	-	-	-	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
PDIA5	10954	genome.wustl.edu	37	3	122865056	122865056	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000316218	+1	known	p.Y364	0.397	71	0%	39	41%	56	46.4%	-	-	-	superfamily_Thiordxn-like_fd
MYLK	4638	genome.wustl.edu	37	3	123411644	123411644	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053025.3	-1	reviewed	p.Y1168C	1.000	25	0%	28	17.9%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
CCDC14	64770	genome.wustl.edu	37	3	123665877	123665877	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022757.4	-1	validated	p.R332Q	0.000	386	0%	239	45.2%	20	60%	benign(0.006)	tolerated(0.64)	neutral(0.003)	NULL
KALRN	8997	genome.wustl.edu	37	3	124114000	124114000	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024660.3	+1	reviewed	p.D659Y	1.000	70	0%	51	43.1%	1	0%	possibly_damaging(0.776)	deleterious(0.02)	deleterious(0.672)	HMMSmart_SM00150,superfamily_Spectrin repeat
KALRN	8997	genome.wustl.edu	37	3	124157874	124157874	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024660.3	+1	reviewed	p.A1061V	1.000	200	0%	74	41.9%	0	-	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	NULL
KALRN	8997	genome.wustl.edu	37	3	124385350	124385350	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024660.3	+1	reviewed	p.E2133K	0.999	19	0%	18	50%	4	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
UMPS	7372	genome.wustl.edu	37	3	124462840	124462840	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000373.3	+1	reviewed	p.R451H	1.000	169	0%	126	42.9%	49	46.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_OMPdecase,superfamily_Ribulose-phoshate binding barrel
HEG1	57493	genome.wustl.edu	37	3	124692663	124692663	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020733.1	-1	validated	p.R1303H	1.000	343	0%	171	45.6%	5	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ZNF148	7707	genome.wustl.edu	37	3	124952029	124952029	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021964.2	-1	validated	p.T514M	1.000	165	0%	56	33.9%	19	52.6%	probably_damaging(0.989)	tolerated(0.11)	deleterious(0.711)	NULL
ZNF148	7707	genome.wustl.edu	37	3	124952374	124952374	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021964.2	-1	validated	p.R399I	1.000	455	0%	127	37%	5	40%	possibly_damaging(0.92)	deleterious(0.01)	deleterious(0.776)	NULL
ZNF148	7707	genome.wustl.edu	37	3	124953163	124953163	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021964.2	-1	validated	p.P226	1.000	366	0%	114	41.2%	5	20%	-	-	-	superfamily_SSF57667
SLC41A3	54946	genome.wustl.edu	37	3	125745308	125745308	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008485.1	-1	validated	p.V156	0.707	18	0%	10	80%	18	33.3%	-	-	-	HMMPfam_MgtE
ALDH1L1	10840	genome.wustl.edu	37	3	125828901	125828901	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012190.2	-1	reviewed	p.D745N	1.000	53	0%	48	50%	1	0%	benign(0)	tolerated(0.5)	neutral(0.010)	HMMPfam_Aldedh,superfamily_Aldehyde_DH/Histidinol_DH
ZXDC	79364	genome.wustl.edu	37	3	126180928	126180928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025112.4	-1	validated	p.A526V	0.000	29	0%	16	37.5%	9	55.5%	benign(0)	tolerated(0.14)	neutral(0.249)	NULL
UROC1	131669	genome.wustl.edu	37	3	126224567	126224567	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144639.2	-1	reviewed	p.G264R	1.000	11	0.000	8	0.625	0	-	probably_damaging(0.996)	deleterious(0.03)	deleterious(0.826)	HMMPfam_Urocanase,superfamily_Urocanase
PLXNA1	5361	genome.wustl.edu	37	3	126708282	126708282	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032242.3	+1	validated	p.I259	0.814	14	0%	18	61.1%	29	44.8%	-	-	-	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
PLXNA1	5361	genome.wustl.edu	37	3	126708492	126708492	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032242.3	+1	validated	p.P329	1.000	29	0%	12	50%	19	63.1%	-	-	-	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
PLXNA1	5361	genome.wustl.edu	37	3	126734094	126734094	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032242.3	+1	validated	p.E959G	1.000	12	0%	19	26.3%	15	33.3%	benign(0.406)	tolerated(0.32)	neutral(0.154)	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
PLXNA1	5361	genome.wustl.edu	37	3	126736615	126736615	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032242.3	+1	validated	p.A1157	0.001	21	0%	19	36.8%	49	51%	-	-	-	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
TPRA1	131601	genome.wustl.edu	37	3	127294317	127294317	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000393400	-1	known	p.S214F	1.000	16	0%	14	28.6%	69	39.1%	benign(0.238)	-	-	HMMPfam_Tmemb_40,PatternScan_PEROXIDASE_2
MCM2	4171	genome.wustl.edu	37	3	127325070	127325070	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000491422	+1	known	p.R124K	1.000	33	0%	39	33.3%	68	55.8%	-	-	-	superfamily_Nucleic acid-binding proteins
PODXL2	50512	genome.wustl.edu	37	3	127379519	127379519	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015720.2	+1	validated	p.G216	0.008	42	0%	38	47.4%	61	67.2%	-	-	-	NULL
PODXL2	50512	genome.wustl.edu	37	3	127390412	127390412	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015720.2	+1	validated	p.L521F	0.987	12	0%	15	46.7%	78	37.1%	probably_damaging(0.956)	deleterious(0.03)	deleterious(0.764)	HMMPfam_CD34_antigen
MGLL	11343	genome.wustl.edu	37	3	127441359	127441359	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007283.5	-1	validated	p.V105I	0.975	60	0%	61	42.6%	23	43.4%	benign(0)	tolerated(0.56)	neutral(0.006)	HMMPfam_Abhydrolase_1,superfamily_SSF53474
KBTBD12	166348	genome.wustl.edu	37	3	127642821	127642821	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207335.2	+1	validated	p.R306Q	0.007	191	0%	127	48.8%	0	-	benign(0.002)	tolerated(0.5)	neutral(0.010)	superfamily_Galactose oxidase central domain
RUVBL1	8607	genome.wustl.edu	37	3	127806561	127806561	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003707.2	-1	validated	p.Q369H	0.999	158	0%	100	37%	73	65.7%	benign(0.013)	deleterious(0.04)	neutral(0.349)	HMMPfam_TIP49,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAJB8	165721	genome.wustl.edu	37	3	128182004	128182004	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153330.2	-1	validated	p.R29C	1.000	97	0%	85	82.4%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain
RAB7A	7879	genome.wustl.edu	37	3	128532194	128532194	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004637.5	+1	reviewed	p.E185K	1.000	92	0%	37	43.2%	225	45.3%	benign(0.237)	deleterious(0.01)	neutral(0.429)	HMMSmart_SM00176,superfamily_P-loop containing nucleoside triphosphate hydrolases
ACAD9	28976	genome.wustl.edu	37	3	128614260	128614260	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014049.4	+1	reviewed	e4+1	1.000	54	0%	38	47.4%	6	100%	-	-	-	-
KIAA1257	57501	genome.wustl.edu	37	3	128690233	128690233	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020741.2	-1	predicted	p.R355	0.000	240	0%	163	39.3%	1	0%	-	-	-	NULL
COPG1	22820	genome.wustl.edu	37	3	128984412	128984412	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016128.3	+1	validated	p.R415	0.129	42	0%	44	54.5%	224	48.2%	-	-	-	HMMPfam_Adaptin_N,superfamily_ARM repeat
IFT122	55764	genome.wustl.edu	37	3	129196904	129196904	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052985.2	+1	reviewed	p.R449I	0.999	206	0%	113	49.6%	8	12.5%	benign(0.115)	deleterious(0.02)	neutral(0.392)	NULL
IFT122	55764	genome.wustl.edu	37	3	129207157	129207157	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052985.2	+1	reviewed	p.A688T	1.000	101	0%	69	36.2%	7	85.7%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
RHO	6010	genome.wustl.edu	37	3	129249788	129249788	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000539.3	+1	reviewed	p.S144N	1.000	28	0%	32	50%	0	-	benign(0.197)	deleterious(0)	neutral(0.463)	HMMPfam_7tm_1,superfamily_SSF81321
PLXND1	23129	genome.wustl.edu	37	3	129294392	129294392	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015103.2	-1	validated	p.R817Q	0.986	21	0%	19	31.6%	16	25%	benign(0.001)	tolerated(0.68)	neutral(0.002)	NULL
COL6A5	256076	genome.wustl.edu	37	3	130120660	130120660	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153264.5	+1	validated	p.P1397T	0.579	121	0%	38	42.1%	0	-	benign(0.006)	-	-	HMMPfam_Collagen
COL6A5	256076	genome.wustl.edu	37	3	130159320	130159320	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153264.5	+1	validated	p.Q2046H	0.928	127	0%	48	35.4%	0	-	benign(0)	-	-	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
COL6A5	256076	genome.wustl.edu	37	3	130159634	130159634	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153264.5	+1	validated	p.A2151V	0.077	246	0%	58	41.4%	0	-	benign(0)	-	-	HMMSmart_VWA,superfamily_SSF53300
COL6A6	131873	genome.wustl.edu	37	3	130289701	130289701	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102608.1	+1	provisional	p.I814S	0.996	147	0%	64	42.2%	1	0%	probably_damaging(0.965)	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
PIK3R4	30849	genome.wustl.edu	37	3	130409456	130409456	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014602.2	-1	validated	p.T1047	0.028	142	0%	54	42.6%	24	62.5%	-	-	-	HMMSmart_WD40,superfamily_WD40_like
PIK3R4	30849	genome.wustl.edu	37	3	130435419	130435419	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014602.2	-1	validated	p.S718G	1.000	111	0%	50	36%	11	63.6%	probably_damaging(0.974)	tolerated(0.28)	neutral(0.448)	NULL
PIK3R4	30849	genome.wustl.edu	37	3	130463795	130463795	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014602.2	-1	validated	p.A90T	0.999	191	0%	89	44.9%	3	33.3%	benign(0)	tolerated(0.27)	neutral(0.034)	HMMPfam_Pkinase_Tyr,superfamily_Kinase_like
ASTE1	28990	genome.wustl.edu	37	3	130732911	130732911	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014065.2	-1	validated	p.N677S	0.001	183	0.5%	64	54.7%	6	33.3%	benign(0)	tolerated(0.08)	neutral(0.300)	NULL
ASTE1	28990	genome.wustl.edu	37	3	130742900	130742900	+	Silent	SNP	A	A	G	rs34597185	byCluster;byFrequency;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014065.2	-1	validated	p.I417	0.000	83	0%	35	25.7%	3	0%	-	-	-	NULL
CPNE4	131034	genome.wustl.edu	37	3	131388553	131388553	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130808.1	-1	reviewed	p.S216Y	1.000	122	0%	39	28.2%	1	100%	possibly_damaging(0.772)	deleterious(0.01)	deleterious(0.693)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
DNAJC13	23317	genome.wustl.edu	37	3	132179159	132179159	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015268.3	+1	validated	p.K505N	1.000	213	0%	61	34.4%	5	80%	benign(0.099)	tolerated(0.23)	neutral(0.049)	superfamily_ARM repeat
DNAJC13	23317	genome.wustl.edu	37	3	132186054	132186054	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015268.3	+1	validated	p.R702K	1.000	262	0%	147	36.1%	4	25%	benign(0.002)	tolerated(1)	-	superfamily_ARM repeat
DNAJC13	23317	genome.wustl.edu	37	3	132199244	132199244	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015268.3	+1	validated	p.G935E	1.000	169	0%	55	36.4%	6	16.6%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_ARM repeat
DNAJC13	23317	genome.wustl.edu	37	3	132209752	132209752	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015268.3	+1	validated	p.Q1160	1.000	101	0%	40	60%	9	44.4%	-	-	-	superfamily_ARM repeat
DNAJC13	23317	genome.wustl.edu	37	3	132211376	132211376	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015268.3	+1	validated	p.E1248K	1.000	235	0%	81	46.9%	11	27.2%	benign(0.021)	deleterious(0.02)	neutral(0.384)	superfamily_ARM repeat
UBA5	79876	genome.wustl.edu	37	3	132394502	132394502	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024818.3	+1	reviewed	p.I334M	0.930	270	0%	79	16.5%	21	9.5%	unknown(0)	tolerated(0.13)	-	superfamily_MoeB
NPHP3	27031	genome.wustl.edu	37	3	132427038	132427038	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153240.3	-1	reviewed	p.I394	0.985	337	0%	171	45.6%	4	0%	-	-	-	NULL
SRPRB	58477	genome.wustl.edu	37	3	133534432	133534432	+	Splice_Site	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021203.3	+1	reviewed	e5-2	1.000	129	0%	89	15.7%	1	0%	-	-	-	-
RAB6B	51560	genome.wustl.edu	37	3	133557013	133557013	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016577.3	-1	validated	p.K164N	1.000	34	0%	25	44%	5	80%	benign(0.151)	tolerated(0.29)	neutral(0.043)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
SLCO2A1	6578	genome.wustl.edu	37	3	133663938	133663938	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005630.2	-1	validated	e10+1	1.000	23	0%	23	34.8%	0	-	-	-	-	-
AMOTL2	51421	genome.wustl.edu	37	3	134085175	134085175	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016201.2	-1	reviewed	p.K379T	1.000	93	0%	61	45.9%	25	48%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	NULL
EPHB1	2047	genome.wustl.edu	37	3	134911473	134911473	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004441.4	+1	reviewed	p.I646	1.000	76	0%	41	56.1%	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP
PPP2R3A	5523	genome.wustl.edu	37	3	135809480	135809480	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002718.3	+1	reviewed	p.I966	0.994	426	0%	112	46.4%	10	40%	-	-	-	superfamily_EF-hand
PCCB	5096	genome.wustl.edu	37	3	135975432	135975432	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000462542	+1	known	p.E69G	1.000	414	0%	249	41.8%	36	50%	-	-	-	HMMPfam_Carboxyl_trans,superfamily_ClpP/crotonase
SLC35G2	80723	genome.wustl.edu	37	3	136573929	136573929	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001097599.1	+1	validated	p.L209	1.000	147	0%	100	49%	4	25%	-	-	-	HMMPfam_DUF6,superfamily_SSF103481
IL20RB	53833	genome.wustl.edu	37	3	136710897	136710897	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144717.2	+1	validated	p.A217T	0.995	74	0%	47	46.8%	2	0%	benign(0.273)	tolerated(0.67)	neutral(0.032)	superfamily_Fibronectin type III
SOX14	8403	genome.wustl.edu	37	3	137483747	137483747	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004189.2	+1	reviewed	p.R41C	1.000	38	0%	39	38.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
CLDN18	51208	genome.wustl.edu	37	3	137749869	137749869	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002026.2	+1	validated	p.G224	1.000	84	0%	67	43.3%	0	-	-	-	-	NULL
CLDN18	51208	genome.wustl.edu	37	3	137749971	137749971	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002026.2	+1	validated	p.H258Q	0.215	75	0%	37	37.8%	0	-	benign(0.032)	deleterious(0.01)	neutral(0.407)	NULL
DZIP1L	199221	genome.wustl.edu	37	3	137783573	137783573	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173543.2	-1	validated	p.K680R	0.899	88	0%	58	46.6%	0	-	probably_damaging(0.955)	tolerated(0.4)	neutral(0.415)	NULL
DZIP1L	199221	genome.wustl.edu	37	3	137811252	137811252	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173543.2	-1	validated	p.V281	0.901	477	0%	206	42.7%	0	-	-	-	-	NULL
DZIP1L	199221	genome.wustl.edu	37	3	137822728	137822728	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173543.2	-1	validated	p.R29H	0.969	9	0.000	8	0.500	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DBR1	51163	genome.wustl.edu	37	3	137881065	137881065	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016216.2	-1	validated	p.E434G	0.990	141	0%	111	40.5%	17	82.3%	benign(0.4)	deleterious(0.02)	deleterious(0.512)	NULL
DBR1	51163	genome.wustl.edu	37	3	137882683	137882683	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016216.2	-1	validated	p.Q244H	0.821	383	0%	192	42.7%	9	44.4%	possibly_damaging(0.911)	tolerated(0.07)	deleterious(0.682)	HMMPfam_DBR1
MRAS	22808	genome.wustl.edu	37	3	138091807	138091807	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085049.1	+1	validated	p.A28T	1.000	30	0%	29	41.4%	7	42.8%	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
ESYT3	83850	genome.wustl.edu	37	3	138179467	138179467	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031913.3	+1	validated	p.N251	1.000	59	0%	50	46%	2	50%	-	-	-	NULL
CEP70	80321	genome.wustl.edu	37	3	138256053	138256053	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024491.2	-1	validated	p.C201Y	1.000	339	0.3%	184	54.9%	10	50%	probably_damaging(0.976)	deleterious(0.04)	deleterious(0.767)	NULL
PRR23B	389151	genome.wustl.edu	37	3	138738766	138738766	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013650.2	-1	validated	p.A246	0.000	7	0.000	16	0.312	0	-	-	-	-	HMMPfam_DUF2476
COPB2	9276	genome.wustl.edu	37	3	139081313	139081313	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004766.2	-1	validated	p.R644H	1.000	200	0%	77	49.4%	151	34.4%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMPfam_Coatomer_WDAD
CLSTN2	64084	genome.wustl.edu	37	3	140123541	140123541	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022131.2	+1	validated	p.P190	0.069	54	0%	19	21.1%	1	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
ACPL2	92370	genome.wustl.edu	37	3	141011382	141011382	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037172.1	+1	validated	p.R260C	0.998	57	0%	34	70.6%	13	23%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Acid_phosphat_A,superfamily_Phosphoglycerate mutase-like
ACPL2	92370	genome.wustl.edu	37	3	141011391	141011391	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037172.1	+1	validated	p.L263I	0.998	55	0%	36	11.1%	14	42.8%	possibly_damaging(0.731)	tolerated(0.47)	neutral(0.278)	HMMPfam_Acid_phosphat_A,superfamily_Phosphoglycerate mutase-like
ACPL2	92370	genome.wustl.edu	37	3	141011559	141011559	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037172.1	+1	validated	p.E319K	1.000	70	0%	40	42.5%	14	50%	possibly_damaging(0.905)	tolerated(0.07)	deleterious(0.678)	HMMPfam_Acid_phosphat_A,superfamily_Phosphoglycerate mutase-like
ZBTB38	253461	genome.wustl.edu	37	3	141162840	141162840	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080412.2	+1	validated	p.S537Y	1.000	64	0%	34	47.1%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
RASA2	5922	genome.wustl.edu	37	3	141290306	141290306	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006506.2	+1	reviewed	p.A360D	1.000	335	0.3%	181	12.7%	3	33.3%	probably_damaging(0.966)	deleterious(0)	deleterious(0.853)	HMMSmart_RasGAP,superfamily_Rho_GAP
ATR	545	genome.wustl.edu	37	3	142241635	142241635	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001184.3	-1	reviewed	p.T1401A	1.000	211	0%	80	18.8%	3	0%	benign(0.021)	tolerated(0.48)	neutral(0.011)	superfamily_ARM repeat
ATR	545	genome.wustl.edu	37	3	142269004	142269004	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001184.3	-1	reviewed	p.F982	1.000	137	0%	61	49.2%	4	50%	-	-	-	superfamily_ARM repeat
SLC9A9	285195	genome.wustl.edu	37	3	143185984	143185984	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173653.3	-1	reviewed	p.S455Y	0.998	135	0%	73	27.4%	1	0%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	HMMPfam_Na_H_Exchanger
C3orf58	205428	genome.wustl.edu	37	3	143708517	143708517	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173552.3	+1	validated	p.G376V	1.000	103	0%	57	49.1%	14	42.8%	possibly_damaging(0.697)	tolerated(0.05)	deleterious(0.595)	NULL
C3orf58	205428	genome.wustl.edu	37	3	143708634	143708634	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173552.3	+1	validated	p.A415G	1.000	65	0%	39	30.8%	14	28.5%	probably_damaging(0.99)	tolerated(0.17)	deleterious(0.500)	NULL
PLOD2	5352	genome.wustl.edu	37	3	145794621	145794621	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182943.2	-1	reviewed	p.Y542C	1.000	313	0%	61	27.9%	20	75%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PLOD2	5352	genome.wustl.edu	37	3	145804578	145804578	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182943.2	-1	reviewed	p.G375*	1.000	474	0%	167	37.7%	37	16.2%	-	-	-	NULL
PLOD2	5352	genome.wustl.edu	37	3	145824365	145824365	+	Missense_Mutation	SNP	T	T	G	rs189340894	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182943.2	-1	reviewed	p.D190A	1.000	337	0%	134	38.8%	27	77.7%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
ZIC4	84107	genome.wustl.edu	37	3	147113783	147113783	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000383075	-1	known	p.G182R	1.000	25	0%	31	54.8%	0	-	possibly_damaging(0.906)	tolerated(0.06)	deleterious(0.682)	HMMSmart_SM00355
CPB1	1360	genome.wustl.edu	37	3	148558746	148558746	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000479862	+1	known	e5+2	0.003	172	0%	71	49.3%	0	-	benign(0.074)	deleterious(0)	neutral(0.450)	-
CPB1	1360	genome.wustl.edu	37	3	148562467	148562467	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001871.2	+1	reviewed	p.R231*	1.000	167	0%	89	48.3%	0	-	-	-	-	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
HLTF	6596	genome.wustl.edu	37	3	148752778	148752778	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003071.3	-1	reviewed	p.N935T	1.000	203	0%	129	32.6%	26	38.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
HPS3	84343	genome.wustl.edu	37	3	148858169	148858169	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032383.3	+1	reviewed	p.A199V	0.969	372	0%	154	40.9%	7	42.8%	probably_damaging(0.955)	deleterious(0.01)	deleterious(0.804)	NULL
CP	1356	genome.wustl.edu	37	3	148894052	148894052	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000096.3	-1	reviewed	p.V1056I	0.352	247	0%	78	52.6%	58	51.7%	probably_damaging(0.995)	tolerated(0.12)	deleterious(0.718)	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_2
CP	1356	genome.wustl.edu	37	3	148927133	148927133	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000096.3	-1	reviewed	p.E216K	1.000	211	0%	96	40.6%	22	36.3%	possibly_damaging(0.815)	tolerated(0.07)	deleterious(0.627)	superfamily_Cupredoxins
ANKUB1	389161	genome.wustl.edu	37	3	149485707	149485707	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144960.1	-1	predicted	p.A248T	1.000	50	0%	36	55.6%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00248,superfamily_Ankyrin repeat
RNF13	11342	genome.wustl.edu	37	3	149613337	149613337	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000361785	+1	known	p.D11A	1.000	188	0%	89	46.1%	22	50%	unknown(0)	tolerated(0.1)	-	NULL
TMEM183B	653659	genome.wustl.edu	37	3	149700263	149700263	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079809.1	-1	validated	p.P278H	0.965	228	0%	161	44.1%	121	0.8%	-	-	-	NULL
TSC22D2	9819	genome.wustl.edu	37	3	150176284	150176284	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014779.2	+1	provisional	p.S735F	1.000	184	0%	68	44.1%	11	72.7%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_TSC22
ENSG00000198843	0	genome.wustl.edu	37	3	150344831	150344831	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000361622	+1	known	p.H166	1.000	164	0.6%	98	50%	110	40.9%	-	-	-	HMMPfam_SelT
SIAH2	6478	genome.wustl.edu	37	3	150460066	150460066	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005067.5	-1	reviewed	p.T279	0.322	27	3.7%	22	40.9%	72	41.6%	-	-	-	superfamily_Traf_like,HMMPfam_Sina
CLRN1	7401	genome.wustl.edu	37	3	150645955	150645955	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174878.2	-1	reviewed	p.A156D	1.000	202	0%	79	32.9%	0	-	possibly_damaging(0.909)	deleterious(0.05)	deleterious(0.708)	NULL
MED12L	116931	genome.wustl.edu	37	3	151093923	151093923	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053002.4	+1	reviewed	p.L1290R	0.999	152	0.7%	62	38.7%	4	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
MED12L	116931	genome.wustl.edu	37	3	151112649	151112649	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053002.4	+1	reviewed	p.F1903L	1.000	33	0%	14	64.3%	5	40%	benign(0)	tolerated(0.66)	neutral(0.003)	NULL
MED12L	116931	genome.wustl.edu	37	3	151134183	151134183	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053002.4	+1	reviewed	p.L2092	1.000	19	0%	23	26.1%	7	0%	-	-	-	NULL
IGSF10	285313	genome.wustl.edu	37	3	151156275	151156275	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178822.4	-1	validated	p.D2025G	1.000	263	0%	115	47%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
IGSF10	285313	genome.wustl.edu	37	3	151163622	151163622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178822.4	-1	validated	p.E1383K	0.000	132	0%	74	47.3%	1	0%	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
IGSF10	285313	genome.wustl.edu	37	3	151164232	151164232	+	Silent	SNP	C	C	T	rs181702818	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178822.4	-1	validated	p.S1179	0.000	311	0%	143	49.7%	0	-	-	-	-	NULL
IGSF10	285313	genome.wustl.edu	37	3	151171535	151171535	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178822.4	-1	validated	p.R118	0.713	105	0%	33	30.3%	0	-	-	-	-	HMMSmart_SM00369,superfamily_L domain-like
AADACL2	344752	genome.wustl.edu	37	3	151451931	151451931	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207365.3	+1	validated	p.L36F	0.017	487	0.2%	163	48.5%	0	-	unknown(0)	deleterious(0)	-	NULL
AADAC	13	genome.wustl.edu	37	3	151545576	151545576	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001086.2	+1	reviewed	p.V272	0.205	94	0%	38	52.6%	0	-	-	-	-	HMMPfam_Abhydrolase_3,superfamily_alpha/beta-Hydrolases
P2RY1	5028	genome.wustl.edu	37	3	152553731	152553731	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002563.2	+1	reviewed	p.L54M	1.000	26	0%	30	36.7%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF81321
GPR149	344758	genome.wustl.edu	37	3	154146783	154146783	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001038705.1	-1	provisional	p.L208I	0.253	16	0%	12	33.3%	0	-	possibly_damaging(0.798)	deleterious(0)	deleterious(0.745)	NULL
MME	4311	genome.wustl.edu	37	3	154802049	154802049	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000902.3	+1	reviewed	p.L31	0.986	104	0%	54	37%	4	75%	-	-	-	NULL
MME	4311	genome.wustl.edu	37	3	154802094	154802094	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000902.3	+1	reviewed	p.I46	0.006	86	0%	45	42.2%	3	0%	-	-	-	NULL
MME	4311	genome.wustl.edu	37	3	154834501	154834501	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000902.3	+1	reviewed	p.D163G	0.039	232	0%	63	39.7%	2	50%	benign(0.011)	tolerated(0.37)	neutral(0.019)	"HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain"
PLCH1	23007	genome.wustl.edu	37	3	155199720	155199720	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130960.1	-1	validated	p.T1373	0.000	69	0%	36	41.7%	6	50%	-	-	-	NULL
PLCH1	23007	genome.wustl.edu	37	3	155200141	155200141	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130960.1	-1	validated	p.G1233D	0.002	90	0%	70	37.1%	15	33.3%	benign(0)	tolerated(0.64)	neutral(0.003)	NULL
PLCH1	23007	genome.wustl.edu	37	3	155200461	155200461	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130960.1	-1	validated	p.S1126	0.029	105	0%	76	50%	8	62.5%	-	-	-	NULL
SLC33A1	9197	genome.wustl.edu	37	3	155571463	155571463	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004733.2	-1	reviewed	p.D108	1.000	41	0%	35	37.1%	21	42.8%	-	-	-	superfamily_MFS general substrate transporter
SSR3	6747	genome.wustl.edu	37	3	156266745	156266745	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007107.2	-1	reviewed	p.K103T	1.000	574	0%	240	42.5%	114	42.9%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_TRAP-gamma
ENSG00000197980	0	genome.wustl.edu	37	3	156660454	156660454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000440145	+1	known	p.Q232H	0.864	188	0%	50	14%	0	-	benign(0.002)	tolerated(0.29)	neutral(0.029)	NULL
LEKR1	389170	genome.wustl.edu	37	3	156729232	156729232	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004316.2	+1	validated	p.S76	1.000	275	0%	118	44.1%	0	-	-	-	-	NULL
CCNL1	57018	genome.wustl.edu	37	3	156867873	156867873	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020307.2	-1	validated	p.R287K	1.000	247	0%	110	40%	18	61.1%	benign(0)	tolerated(0.63)	neutral(0.004)	HMMSmart_SM00385,superfamily_Cyclin-like
CCNL1	57018	genome.wustl.edu	37	3	156870835	156870835	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020307.2	-1	validated	p.H200R	1.000	262	0%	91	50.5%	20	55%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_Cyclin-like
VEPH1	79674	genome.wustl.edu	37	3	157131702	157131702	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024621.2	-1	validated	p.R292	0.661	252	0%	70	41.4%	4	50%	-	-	-	NULL
SHOX2	6474	genome.wustl.edu	37	3	157820658	157820658	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006884.3	-1	reviewed	p.D122N	1.000	76	0%	66	60.6%	1	0%	benign(0.045)	tolerated(0.38)	neutral(0.020)	NULL
RSRC1	51319	genome.wustl.edu	37	3	158254944	158254944	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016625.2	+1	provisional	p.S239Y	1.000	194	0%	46	45.7%	29	44.8%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
MLF1	4291	genome.wustl.edu	37	3	158310254	158310254	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022443.3	+1	validated	p.R27*	0.911	316	0%	117	45.3%	9	0%	-	-	-	HMMPfam_Mlf1IP
MLF1	4291	genome.wustl.edu	37	3	158310333	158310333	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022443.3	+1	validated	p.N53S	0.000	431	0%	166	38.6%	10	100%	benign(0.021)	tolerated(0.15)	neutral(0.242)	HMMPfam_Mlf1IP
GFM1	85476	genome.wustl.edu	37	3	158376716	158376716	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024996.5	+1	reviewed	p.G363	0.976	168	0%	73	24.7%	9	33.3%	-	-	-	superfamily_Translat_factor
GFM1	85476	genome.wustl.edu	37	3	158399904	158399904	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024996.5	+1	reviewed	p.F574	0.117	163	0%	85	41.2%	7	14.2%	-	-	-	HMMPfam_EFG_IV,superfamily_Ribosomal_S5_D2-typ_fold
MFSD1	64747	genome.wustl.edu	37	3	158539861	158539861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022736.2	+1	validated	p.A337T	1.000	154	0%	77	41.6%	20	35%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
KPNA4	3840	genome.wustl.edu	37	3	160254612	160254612	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002268.3	-1	reviewed	p.R29Q	1.000	692	0.1%	264	38.3%	24	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IBB
OTOL1	131149	genome.wustl.edu	37	3	161214860	161214860	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080440.1	+1	provisional	p.N89H	1.000	283	0%	83	56.6%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
SI	6476	genome.wustl.edu	37	3	164700061	164700061	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001041.3	-1	reviewed	p.S1795	0.000	422	0%	105	52.4%	0	-	-	-	-	NULL
SI	6476	genome.wustl.edu	37	3	164709231	164709231	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001041.3	-1	reviewed	p.T1673I	0.000	231	0%	74	50%	0	-	benign(0.01)	deleterious(0.04)	neutral(0.349)	HMMPfam_Glyco_hydro_31
SI	6476	genome.wustl.edu	37	3	164741405	164741405	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001041.3	-1	reviewed	p.L1018F	0.965	292	0%	60	55%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SLITRK3	22865	genome.wustl.edu	37	3	164906034	164906034	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014926.2	-1	validated	p.H862R	1.000	66	0%	44	47.7%	0	-	benign(0.202)	deleterious(0)	neutral(0.464)	NULL
SLITRK3	22865	genome.wustl.edu	37	3	164907238	164907238	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014926.2	-1	validated	p.L461F	1.000	84	0%	49	44.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058
SLITRK3	22865	genome.wustl.edu	37	3	164907324	164907324	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014926.2	-1	validated	p.S432Y	1.000	63	0%	45	60%	0	-	probably_damaging(0.953)	deleterious(0.05)	deleterious(0.742)	superfamily_SSF52058
ZBBX	79740	genome.wustl.edu	37	3	167000277	167000277	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024687.2	-1	validated	p.K629T	0.004	140	0%	85	32.9%	0	-	benign(0)	tolerated(0.23)	neutral(0.042)	NULL
PDCD10	11235	genome.wustl.edu	37	3	167402117	167402117	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007217.3	-1	reviewed	p.Q206H	1.000	323	0%	97	40.2%	44	43.1%	benign(0.211)	tolerated(0.56)	neutral(0.027)	NULL
GOLIM4	27333	genome.wustl.edu	37	3	167762637	167762637	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014498.3	-1	reviewed	p.N115	1.000	294	0%	98	42.9%	39	58.9%	-	-	-	NULL
MIR551B	693136	genome.wustl.edu	37	3	168269703	168269703	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384984	+1	known	NULL	1.000	204	0%	97	46.4%	0	-	-	-	-	-
ENSG00000206777	0	genome.wustl.edu	37	3	169438043	169438043	+	RNA	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384050	-1	novel	NULL	0.173	137	0%	30	26.7%	0	-	-	-	-	-
MYNN	55892	genome.wustl.edu	37	3	169496757	169496757	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018657.3	+1	provisional	p.S156	1.000	82	0%	65	55.4%	3	33.3%	-	-	-	NULL
MYNN	55892	genome.wustl.edu	37	3	169497147	169497147	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018657.3	+1	provisional	p.A286	1.000	56	0%	37	43.2%	19	42.1%	-	-	-	NULL
MYNN	55892	genome.wustl.edu	37	3	169497265	169497265	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018657.3	+1	provisional	p.G326*	1.000	98	0%	36	66.7%	13	46.1%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
LRRC34	151827	genome.wustl.edu	37	3	169514609	169514609	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153353.4	-1	validated	p.I233L	0.759	190	0%	107	39.3%	1	100%	benign(0.003)	tolerated(0.25)	neutral(0.037)	HMMSmart_SM00368,superfamily_RNI-like
SAMD7	344658	genome.wustl.edu	37	3	169644784	169644784	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182610.2	+1	provisional	p.T245M	0.000	68	0%	55	63.6%	0	-	benign(0.193)	deleterious(0)	neutral(0.463)	NULL
GPR160	26996	genome.wustl.edu	37	3	169802025	169802025	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014373.2	+1	validated	p.F89L	1.000	309	0.3%	93	19.4%	18	5.5%	possibly_damaging(0.653)	tolerated(0.11)	deleterious(0.501)	NULL
PHC3	80012	genome.wustl.edu	37	3	169863278	169863278	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024947.3	-1	validated	p.A202V	1.000	48	0%	32	43.8%	9	55.5%	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	NULL
PRKCI	5584	genome.wustl.edu	37	3	170016842	170016842	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002740.5	+1	reviewed	p.L549F	1.000	372	0%	112	42.9%	27	44.4%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMSmart_S_TK_X,superfamily_Kinase_like,HMMPfam_Pkinase_C
SKIL	6498	genome.wustl.edu	37	3	170102357	170102357	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005414.3	+1	validated	p.P411	0.441	209	0%	126	47.6%	20	60%	-	-	-	NULL
SLC2A2	6514	genome.wustl.edu	37	3	170716931	170716931	+	Nonsense_Mutation	SNP	G	G	A	rs34066960		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000340.1	-1	reviewed	p.R365*	0.929	161	0.6%	44	29.5%	0	-	-	-	-	HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_1,superfamily_MFS_gen_substrate_transporter
TNIK	23043	genome.wustl.edu	37	3	170784430	170784430	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015028.2	-1	validated	p.V1265A	1.000	123	0%	46	45.7%	0	-	probably_damaging(0.975)	deleterious(0.02)	deleterious(0.800)	HMMPfam_CNH,HMMSmart_SM00036
TNIK	23043	genome.wustl.edu	37	3	170802100	170802100	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015028.2	-1	validated	p.E1005K	1.000	251	0%	104	42.3%	2	0%	benign(0.291)	deleterious(0.04)	neutral(0.439)	NULL
TNIK	23043	genome.wustl.edu	37	3	170928951	170928951	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015028.2	-1	validated	p.G87D	1.000	428	0%	109	42.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PLD1	5337	genome.wustl.edu	37	3	171451295	171451295	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002662.3	-1	validated	p.Q182R	1.000	810	0%	320	41.6%	1	0%	probably_damaging(0.979)	tolerated(0.15)	deleterious(0.663)	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain
FNDC3B	64778	genome.wustl.edu	37	3	172048404	172048404	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135095.1	+1	validated	p.R485*	1.000	92	0%	81	45.7%	25	12%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
ECT2	1894	genome.wustl.edu	37	3	172525603	172525603	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018098.4	+1	reviewed	p.E732D	1.000	188	0%	70	44.3%	39	41%	benign(0.031)	tolerated(0.13)	neutral(0.254)	superfamily_PH domain-like
NLGN1	22871	genome.wustl.edu	37	3	173998998	173998998	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014932.2	+1	reviewed	p.P793S	1.000	230	0%	82	35.4%	0	-	benign(0.001)	tolerated(0.51)	neutral(0.009)	NULL
NLGN1	22871	genome.wustl.edu	37	3	173999029	173999029	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014932.2	+1	reviewed	p.G803V	1.000	219	0%	64	54.7%	0	-	probably_damaging(0.97)	tolerated(0.05)	deleterious(0.758)	NULL
TBL1XR1	79718	genome.wustl.edu	37	3	176765277	176765277	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024665.4	-1	reviewed	p.D255Y	1.000	164	0%	40	45%	19	47.3%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMSmart_WD40,superfamily_WD40_like
TBL1XR1	79718	genome.wustl.edu	37	3	176768359	176768359	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024665.4	-1	reviewed	p.E156G	1.000	138	0%	66	40.9%	34	32.3%	possibly_damaging(0.439)	tolerated(0.08)	neutral(0.443)	NULL
ZMAT3	64393	genome.wustl.edu	37	3	178745482	178745482	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022470.3	-1	reviewed	p.N170T	1.000	45	0%	40	32.5%	1	0%	probably_damaging(0.996)	tolerated(0.94)	neutral(0.462)	HMMSmart_ZnF_U1,HMMSmart_ZnF_C2H2
ZNF639	51193	genome.wustl.edu	37	3	179051102	179051102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016331.1	+1	provisional	p.P117H	0.979	86	0%	53	43.4%	23	56.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZNF639	51193	genome.wustl.edu	37	3	179052048	179052048	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016331.1	+1	provisional	p.L432	1.000	156	0%	86	50%	22	54.5%	-	-	-	HMMSmart_ZnF_C2H2,superfamily_SSF57667
ACTL6A	86	genome.wustl.edu	37	3	179294049	179294049	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004301.3	+1	reviewed	p.A174V	1.000	632	0%	270	38.5%	32	43.7%	possibly_damaging(0.924)	deleterious(0)	deleterious(0.818)	PatternScan_ASP_PROTEASE,HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
USP13	8975	genome.wustl.edu	37	3	179418824	179418824	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003940.2	+1	validated	p.S128	1.000	227	0%	118	40.7%	2	50%	-	-	-	NULL
PEX5L	51555	genome.wustl.edu	37	3	179526113	179526113	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016559.1	-1	provisional	p.E489*	1.000	128	0%	94	30.9%	0	-	-	-	-	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
TTC14	151613	genome.wustl.edu	37	3	180325454	180325454	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133462.3	+1	validated	p.K397	0.998	187	0%	82	34.1%	2	100%	-	-	-	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
TTC14	151613	genome.wustl.edu	37	3	180327727	180327727	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133462.3	+1	validated	p.Q570	1.000	101	0%	43	39.5%	7	0%	-	-	-	NULL
CCDC39	339829	genome.wustl.edu	37	3	180337710	180337710	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181426.1	-1	validated	p.A683T	1.000	494	0%	129	31.8%	0	-	possibly_damaging(0.604)	tolerated(0.14)	neutral(0.459)	superfamily_Prefoldin
FXR1	8087	genome.wustl.edu	37	3	180685959	180685959	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005087.2	+1	reviewed	p.R440I	1.000	86	0%	52	46.2%	177	49.1%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
SOX2	6657	genome.wustl.edu	37	3	181430503	181430503	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003106.2	+1	reviewed	p.L119F	1.000	15	0.000	9	0.667	2	100%	possibly_damaging(0.768)	deleterious(0)	deleterious(0.730)	NULL
DCUN1D1	54165	genome.wustl.edu	37	3	182681739	182681739	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020640.2	-1	validated	p.W107R	0.998	169	0%	77	45.5%	22	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MCCC1	56922	genome.wustl.edu	37	3	182751849	182751849	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000497959	-1	known	p.F427S	1.000	351	0%	115	44.3%	27	59.2%	benign(0)	tolerated(0.32)	neutral(0.024)	NULL
YEATS2	55689	genome.wustl.edu	37	3	183493786	183493786	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018023.4	+1	validated	p.G818S	0.001	95	0%	42	52.4%	14	35.7%	unknown(0)	-	-	NULL
PARL	55486	genome.wustl.edu	37	3	183551360	183551360	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000417784	-1	known	p.R108C	0.998	126	0.8%	94	41.5%	70	37.1%	-	-	-	HMMPfam_Rhomboid
PARL	55486	genome.wustl.edu	37	3	183562086	183562086	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018622.5	-1	reviewed	p.F180L	1.000	186	0%	76	38.2%	45	53.3%	benign(0.014)	tolerated(0.13)	neutral(0.253)	NULL
ABCC5	10057	genome.wustl.edu	37	3	183689394	183689394	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005688.2	-1	reviewed	p.R573H	0.998	51	0%	48	62.5%	7	28.5%	possibly_damaging(0.468)	tolerated(0.07)	deleterious(0.473)	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC5	10057	genome.wustl.edu	37	3	183695363	183695363	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005688.2	-1	reviewed	p.V449A	1.000	160	0%	56	37.5%	1	100%	possibly_damaging(0.598)	tolerated(0.15)	neutral(0.448)	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
AP2M1	1173	genome.wustl.edu	37	3	183898657	183898657	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004068.3	+1	reviewed	p.Q150H	1.000	67	0%	63	31.7%	224	33%	benign(0.001)	tolerated(0.07)	neutral(0.319)	NULL
ECE2	9718	genome.wustl.edu	37	3	183994324	183994324	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100120.1	+1	validated	p.V32A	0.323	7	0.000	7	0.571	1	0%	benign(0)	tolerated(1)	-	NULL
PSMD2	5708	genome.wustl.edu	37	3	184026568	184026568	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002808.3	+1	reviewed	p.L873	0.993	98	0%	87	43.7%	316	50.9%	-	-	-	NULL
EIF4G1	1981	genome.wustl.edu	37	3	184049787	184049787	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182917.3	+1	reviewed	p.L1511	1.000	31	0%	33	45.5%	295	47.1%	-	-	-	HMMSmart_SM00515,superfamily_ARM repeat
THPO	7066	genome.wustl.edu	37	3	184090566	184090566	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000460.2	-1	reviewed	p.R266H	0.000	163	0%	150	50.7%	0	-	possibly_damaging(0.782)	tolerated(0.21)	neutral(0.337)	NULL
CHRD	8646	genome.wustl.edu	37	3	184101195	184101195	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003741.2	+1	reviewed	p.L437	1.000	16	0%	22	22.7%	4	0%	-	-	-	HMMPfam_CHRD,HMMSmart_SM00754
CHRD	8646	genome.wustl.edu	37	3	184104881	184104881	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003741.2	+1	reviewed	p.R778Q	0.831	32	0%	26	15.4%	1	0%	benign(0.115)	tolerated(0.41)	neutral(0.024)	NULL
VPS8	23355	genome.wustl.edu	37	3	184612649	184612649	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009921.2	+1	validated	p.K647R	0.971	229	0%	139	56.8%	4	25%	benign(0.103)	tolerated(0.72)	neutral(0.009)	NULL
VPS8	23355	genome.wustl.edu	37	3	184644419	184644419	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009921.2	+1	validated	p.R871Q	1.000	133	0%	70	41.4%	7	28.5%	probably_damaging(0.997)	tolerated(0.16)	deleterious(0.526)	NULL
EHHADH	1962	genome.wustl.edu	37	3	184935996	184935996	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001966.3	-1	reviewed	p.L166	0.998	319	0%	177	48.6%	2	50%	-	-	-	HMMPfam_ECH,superfamily_SSF52096
MAP3K13	9175	genome.wustl.edu	37	3	185167783	185167783	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004721.3	+1	reviewed	p.S369I	1.000	81	0%	51	47.1%	0	-	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
LIPH	200879	genome.wustl.edu	37	3	185251432	185251432	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000452897	-1	known	p.S6L	0.996	236	0.4%	130	45.4%	0	-	-	-	-	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
IGF2BP2	10644	genome.wustl.edu	37	3	185407235	185407235	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000457616	-1	known	p.A140T	1.000	68	0%	50	38%	0	-	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
C3orf65	646600	genome.wustl.edu	37	3	185434431	185434431	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000296270	+1	known	p.P88	0.083	74	0%	56	41.1%	0	-	-	-	-	NULL
ETV5	2119	genome.wustl.edu	37	3	185766576	185766576	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004454.2	-1	validated	p.N462S	1.000	32	0%	17	41.2%	39	53.8%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	superfamily_SSF46785
DGKG	1608	genome.wustl.edu	37	3	185983065	185983065	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001346.2	-1	reviewed	p.V414M	0.000	36	0%	31	35.5%	0	-	benign(0)	tolerated(0.25)	neutral(0.037)	NULL
DGKG	1608	genome.wustl.edu	37	3	185993451	185993451	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001346.2	-1	reviewed	p.G265	1.000	14	0%	13	30.8%	0	-	-	-	-	superfamily_Cysteine-rich domain
CRYGS	1427	genome.wustl.edu	37	3	186257302	186257302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017541.2	-1	reviewed	p.R36C	0.997	76	0%	32	50%	3	33.3%	probably_damaging(0.982)	deleterious(0.03)	deleterious(0.791)	HMMPfam_Crystall,HMMSmart_SM00247,superfamily_gamma-Crystallin-like
AHSG	197	genome.wustl.edu	37	3	186338501	186338501	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001622.2	+1	reviewed	p.D296N	0.000	12	0%	15	26.7%	0	-	benign(0.189)	tolerated(0.59)	neutral(0.022)	NULL
KNG1	3827	genome.wustl.edu	37	3	186443046	186443046	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102416.2	+1	reviewed	p.R187	0.264	125	0%	63	42.9%	0	-	-	-	-	HMMPfam_Cystatin,HMMSmart_SM00043,PatternScan_CYSTATIN,superfamily_Cystatin/monellin
KNG1	3827	genome.wustl.edu	37	3	186461521	186461521	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000893.3	+1	reviewed	p.G411C	0.585	91	0%	49	46.9%	0	-	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	NULL
EIF4A2	1974	genome.wustl.edu	37	3	186502819	186502819	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001967.3	+1	validated	p.Q93*	1.000	184	0%	129	44.2%	109	8.2%	-	-	-	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
ST6GAL1	6480	genome.wustl.edu	37	3	186760714	186760714	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003032.2	+1	reviewed	p.R75C	0.000	90	0%	44	45.5%	4	50%	benign(0.001)	tolerated(0.14)	neutral(0.249)	NULL
ST6GAL1	6480	genome.wustl.edu	37	3	186760790	186760790	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003032.2	+1	reviewed	p.S100N	1.000	93	0%	39	41%	4	50%	benign(0.181)	tolerated(0.06)	neutral(0.339)	NULL
BCL6	604	genome.wustl.edu	37	3	187446846	187446846	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130845.1	-1	reviewed	p.I449	0.966	63	0%	43	32.6%	25	28%	-	-	-	NULL
BCL6	604	genome.wustl.edu	37	3	187447665	187447665	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130845.1	-1	reviewed	p.E176D	0.999	25	0%	11	36.4%	19	42.1%	benign(0)	tolerated(1)	-	NULL
LPP	4026	genome.wustl.edu	37	3	188242461	188242461	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005578.3	+1	reviewed	p.P105	0.990	24	0%	16	62.5%	7	28.5%	-	-	-	NULL
LPP	4026	genome.wustl.edu	37	3	188327155	188327155	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005578.3	+1	reviewed	p.T212	0.000	45	0%	28	53.6%	10	50%	-	-	-	NULL
TPRG1	285386	genome.wustl.edu	37	3	188956595	188956595	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198485.3	+1	validated	p.D126N	1.000	136	0.7%	38	44.7%	0	-	probably_damaging(1)	tolerated(0.12)	deleterious(0.760)	NULL
TPRG1	285386	genome.wustl.edu	37	3	188956653	188956653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198485.3	+1	validated	p.R145H	1.000	116	0%	37	32.4%	0	-	possibly_damaging(0.924)	tolerated(0.13)	deleterious(0.625)	NULL
IL1RAP	3556	genome.wustl.edu	37	3	190374364	190374364	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000317757	+1	known	p.L678V	1.000	49	0%	25	32%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
MB21D2	151963	genome.wustl.edu	37	3	192516440	192516440	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178496.3	-1	validated	p.R404H	1.000	26	0%	19	47.4%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ATP13A5	344905	genome.wustl.edu	37	3	192993074	192993074	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198505.2	-1	provisional	p.N1138K	0.198	137	0%	74	40.5%	0	-	probably_damaging(1)	tolerated(0.3)	deleterious(0.528)	NULL
ATP13A5	344905	genome.wustl.edu	37	3	193039527	193039527	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198505.2	-1	provisional	p.H620Y	0.307	59	0%	31	25.8%	0	-	possibly_damaging(0.446)	deleterious(0.02)	deleterious(0.529)	superfamily_SSF81660,superfamily_SSF81665
ATP13A5	344905	genome.wustl.edu	37	3	193051622	193051622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198505.2	-1	provisional	p.D397N	1.000	145	0%	64	48.4%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_E1-E2_ATPase,superfamily_SSF81665
OPA1	4976	genome.wustl.edu	37	3	193374918	193374918	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130837.2	+1	reviewed	p.P743L	0.999	236	0%	83	45.8%	17	82.3%	benign(0.004)	tolerated(0.2)	neutral(0.049)	NULL
HES1	3280	genome.wustl.edu	37	3	193854767	193854767	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005524.2	+1	reviewed	p.K74	1.000	21	0%	22	22.7%	96	17.7%	-	-	-	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
LRRC15	131578	genome.wustl.edu	37	3	194080502	194080502	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135057.2	-1	validated	p.P430H	1.000	45	0%	45	53.3%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMSmart_SM00082,superfamily_L domain-like
LRRC15	131578	genome.wustl.edu	37	3	194081245	194081245	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135057.2	-1	validated	p.T182	0.836	61	0%	61	37.7%	0	-	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
ATP13A3	79572	genome.wustl.edu	37	3	194152481	194152481	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024524.3	-1	validated	p.T796A	0.006	127	0%	70	10%	22	9%	benign(0)	tolerated(0.41)	neutral(0.015)	superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M
ATP13A3	79572	genome.wustl.edu	37	3	194167699	194167699	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024524.3	-1	validated	p.R485I	1.000	220	0%	84	25%	7	57.1%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Calcium ATPase transmembrane domain M
ATP13A3	79572	genome.wustl.edu	37	3	194168666	194168666	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024524.3	-1	validated	p.R408K	1.000	317	0%	168	47%	18	55.5%	benign(0.042)	tolerated(0.27)	neutral(0.036)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M
ACAP2	23527	genome.wustl.edu	37	3	195015528	195015528	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012287.5	-1	validated	p.D562G	1.000	103	0%	54	37%	11	81.8%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
OSTalpha	200931	genome.wustl.edu	37	3	195955776	195955776	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152672.5	+1	validated	p.I206	1.000	53	0%	47	46.8%	1	0%	-	-	-	NULL
TM4SF19	116211	genome.wustl.edu	37	3	196050615	196050615	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000446879	-1	known	p.W233C	0.009	11	0%	17	47.1%	2	0%	unknown(0)	-	-	NULL
UBXN7	26043	genome.wustl.edu	37	3	196159229	196159229	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015562.1	-1	validated	p.K14N	1.000	13	0%	19	57.9%	5	20%	benign(0)	tolerated(0.62)	neutral(0.004)	superfamily_UBA-like
LRRC33	375387	genome.wustl.edu	37	3	196388144	196388144	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198565.1	+1	provisional	p.S544P	1.000	71	0%	60	16.7%	2	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_LRR_1,superfamily_SSF52058
PAK2	5062	genome.wustl.edu	37	3	196539612	196539612	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000426668	+1	known	p.L18S	1.000	304	0%	113	36.3%	23	43.4%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SENP5	205564	genome.wustl.edu	37	3	196613454	196613454	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152699.4	+1	validated	p.E468K	1.000	56	0%	33	36.4%	8	12.5%	benign(0.282)	tolerated(0.08)	neutral(0.386)	NULL
MFI2	4241	genome.wustl.edu	37	3	196736603	196736603	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005929.4	-1	reviewed	p.R471W	0.023	14	0%	12	58.3%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Transferrin,HMMSmart_SM00094,superfamily_Periplasmic binding protein-like II
MFI2	4241	genome.wustl.edu	37	3	196746647	196746647	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033316.3	-1	reviewed	p.W246C	0.000	93	0%	76	40.8%	0	-	benign(0.002)	tolerated(0.19)	neutral(0.050)	HMMSmart_SM00094
DLG1	1739	genome.wustl.edu	37	3	197009616	197009616	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004087.2	-1	validated	p.I84M	0.986	243	0%	111	18%	16	18.7%	benign(0.11)	tolerated(0.13)	neutral(0.261)	NULL
ENSG00000214135	0	genome.wustl.edu	37	3	197350254	197350254	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000414207	-1	known	NULL	1.000	398	0%	265	15.1%	0	-	-	-	-	-
LMLN	89782	genome.wustl.edu	37	3	197765445	197765445	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136049.2	+1	reviewed	p.C662	0.991	585	0%	273	37.7%	7	14.2%	-	-	-	NULL
ZNF732	654254	genome.wustl.edu	37	4	265206	265206	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001137608.1	-1	provisional	p.G480	0.628	190	0%	123	46.3%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF721	170960	genome.wustl.edu	37	4	435695	435695	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133474.2	-1	validated	p.V854A	0.001	180	0%	66	43.9%	13	69.2%	benign(0.171)	tolerated(0.74)	neutral(0.017)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
PIGG	54872	genome.wustl.edu	37	4	493192	493192	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127178.1	+1	validated	p.F23S	1.000	15	0%	15	26.7%	7	57.1%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
PIGG	54872	genome.wustl.edu	37	4	494373	494373	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127178.1	+1	validated	p.T115A	1.000	112	0%	69	44.9%	7	14.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Alkaline phosphatase-like
MFSD7	84179	genome.wustl.edu	37	4	680438	680438	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032219.2	-1	provisional	p.E59D	0.297	17	0%	10	50%	1	0%	benign(0.221)	tolerated(0.21)	neutral(0.066)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
TMEM175	84286	genome.wustl.edu	37	4	944227	944227	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032326.2	+1	provisional	p.Q71E	0.998	31	0%	36	22.2%	47	23.4%	probably_damaging(0.973)	tolerated(0.29)	neutral(0.444)	HMMPfam_DUF1211
DGKQ	1609	genome.wustl.edu	37	4	956656	956656	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001347.2	-1	reviewed	p.D647N	1.000	16	0.000	9	0.444	14	57.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_DAGK_cat,HMMSmart_SM00046
RNF212	285498	genome.wustl.edu	37	4	1073454	1073454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001131034.1	-1	validated	p.L163I	0.025	172	0%	98	40.8%	0	-	possibly_damaging(0.727)	tolerated(0.1)	deleterious(0.551)	NULL
KIAA1530	57654	genome.wustl.edu	37	4	1343498	1343498	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020894.2	+1	validated	p.P95	0.210	26	0%	23	17.4%	6	16.6%	-	-	-	NULL
CRIPAK	285464	genome.wustl.edu	37	4	1388339	1388339	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175918.3	+1	validated	p.P14S	0.121	37	0%	51	9.8%	25	8%	probably_damaging(0.994)	-	-	NULL
FGFR3	2261	genome.wustl.edu	37	4	1806243	1806243	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000142.4	+1	reviewed	p.R421Q	1.000	31	0%	33	42.4%	0	-	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	NULL
WHSC1	7468	genome.wustl.edu	37	4	1936892	1936892	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042424.2	+1	reviewed	p.R526I	1.000	171	0.6%	82	51.2%	41	48.7%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	NULL
WHSC1	7468	genome.wustl.edu	37	4	1978324	1978324	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042424.2	+1	reviewed	p.G1248	0.688	35	0%	32	37.5%	82	53.6%	-	-	-	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD
WHSC1	7468	genome.wustl.edu	37	4	1980595	1980595	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042424.2	+1	reviewed	p.R1353W	0.001	5	0.000	10	0.700	25	60%	unknown(0)	deleterious(0)	-	NULL
HAUS3	79441	genome.wustl.edu	37	4	2242279	2242279	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024511.5	-1	provisional	p.H132R	0.763	330	0%	206	39.3%	6	16.6%	possibly_damaging(0.816)	tolerated(0.42)	neutral(0.323)	NULL
NOP14	8602	genome.wustl.edu	37	4	2956170	2956170	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003703.1	-1	validated	p.A198V	0.593	179	0%	105	36.2%	30	30%	benign(0.187)	tolerated(0.75)	neutral(0.019)	HMMPfam_Nop14
NOP14	8602	genome.wustl.edu	37	4	2959397	2959397	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003703.1	-1	validated	p.G89E	1.000	592	0%	393	40.2%	18	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Nop14
NOP14	8602	genome.wustl.edu	37	4	2964983	2964983	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003703.1	-1	validated	p.G22W	0.000	21	0%	23	60.9%	4	50%	unknown(0)	deleterious(0.03)	-	HMMPfam_Nop14
HTT	3064	genome.wustl.edu	37	4	3156114	3156114	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002111.6	+1	reviewed	p.L1198S	0.974	101	0%	48	47.9%	18	94.4%	possibly_damaging(0.487)	tolerated(0.62)	neutral(0.166)	NULL
RGS12	6002	genome.wustl.edu	37	4	3422408	3422408	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198229.2	+1	reviewed	p.S934L	0.998	23	0%	21	42.9%	13	46.1%	probably_damaging(0.997)	tolerated(0.19)	deleterious(0.516)	NULL
LRPAP1	4043	genome.wustl.edu	37	4	3517850	3517850	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002337.2	-1	validated	p.A276V	0.891	31	0%	22	50%	126	41.2%	possibly_damaging(0.548)	deleterious(0)	deleterious(0.631)	HMMPfam_Alpha-2-MRAP_C
LRPAP1	4043	genome.wustl.edu	37	4	3526646	3526646	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002337.2	-1	validated	p.R113C	0.849	87	0%	58	48.3%	105	45.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Alpha-2-MRAP_N,superfamily_MG_RAP_rcpt_1
ZBTB49	166793	genome.wustl.edu	37	4	4304162	4304162	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145291.3	+1	validated	p.G200D	0.153	38	0%	33	12.1%	7	0%	probably_damaging(0.998)	tolerated(0.12)	deleterious(0.735)	NULL
ZBTB49	166793	genome.wustl.edu	37	4	4304229	4304229	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145291.3	+1	validated	p.K222N	1.000	29	0%	16	43.8%	4	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ZBTB49	166793	genome.wustl.edu	37	4	4322891	4322891	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145291.3	+1	validated	p.L716	0.070	30	0%	22	40.9%	3	66.6%	-	-	-	NULL
EVC2	132884	genome.wustl.edu	37	4	5576440	5576440	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147127.4	-1	reviewed	p.A1111G	0.000	163	0%	117	48.7%	1	0%	benign(0.056)	deleterious(0.04)	neutral(0.352)	NULL
EVC2	132884	genome.wustl.edu	37	4	5586359	5586359	+	Silent	SNP	C	C	T	rs182310332	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147127.4	-1	reviewed	p.S1016	0.007	12	0%	15	40%	2	0%	-	-	-	NULL
EVC2	132884	genome.wustl.edu	37	4	5620244	5620244	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147127.4	-1	reviewed	p.F889	0.998	9	0.000	24	0.333	0	-	-	-	-	NULL
EVC2	132884	genome.wustl.edu	37	4	5624571	5624571	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147127.4	-1	reviewed	p.A732T	0.990	14	0.000	7	0.571	0	-	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
EVC	2121	genome.wustl.edu	37	4	5733376	5733376	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153717.2	+1	reviewed	p.A203	0.774	12	0%	13	69.2%	5	80%	-	-	-	NULL
EVC	2121	genome.wustl.edu	37	4	5800319	5800319	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153717.2	+1	reviewed	p.R702C	0.252	6	0.000	7	0.571	6	50%	unknown(0)	deleterious(0.01)	-	NULL
CRMP1	1400	genome.wustl.edu	37	4	5837659	5837659	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014809.1	-1	reviewed	p.A536T	1.000	69	0%	41	31.7%	1	0%	benign(0.113)	deleterious(0)	neutral(0.454)	superfamily_Metalo_hydrolase
CRMP1	1400	genome.wustl.edu	37	4	5868445	5868445	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014809.1	-1	reviewed	p.N140	1.000	174	0%	61	44.3%	2	0%	-	-	-	superfamily_Metalo_hydrolase
JAKMIP1	152789	genome.wustl.edu	37	4	6083430	6083430	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099433.1	-1	validated	p.N336S	1.000	231	0%	119	37%	1	100%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
JAKMIP1	152789	genome.wustl.edu	37	4	6086578	6086578	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099433.1	-1	validated	p.E317*	1.000	169	0%	134	39.6%	0	-	-	-	-	NULL
JAKMIP1	152789	genome.wustl.edu	37	4	6086661	6086661	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099433.1	-1	validated	p.R289Q	1.000	126	0%	81	35.8%	2	0%	possibly_damaging(0.941)	deleterious(0.02)	deleterious(0.770)	NULL
JAKMIP1	152789	genome.wustl.edu	37	4	6114490	6114490	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099433.1	-1	validated	p.L30	0.972	36	0%	35	45.7%	4	25%	-	-	-	NULL
PPP2R2C	5522	genome.wustl.edu	37	4	6349718	6349718	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020416.3	-1	reviewed	p.P215	0.667	81	0%	72	43.1%	5	40%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_PP2A_B_subs_rcg
MAN2B2	23324	genome.wustl.edu	37	4	6606892	6606892	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015274.1	+1	validated	p.E550D	0.000	33	0%	19	42.1%	19	52.6%	benign(0.003)	tolerated(0.59)	neutral(0.004)	superfamily_Galactose mutarotase-like,HMMPfam_Glyco_hydro_38C
MRFAP1	93621	genome.wustl.edu	37	4	6642770	6642770	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033296.1	+1	provisional	p.D61N	0.993	32	0%	19	26.3%	365	21.6%	benign(0.227)	deleterious(0)	neutral(0.467)	NULL
KIAA0232	9778	genome.wustl.edu	37	4	6865453	6865453	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100590.1	+1	validated	p.E1115G	1.000	183	0%	73	43.8%	11	63.6%	possibly_damaging(0.78)	deleterious(0)	deleterious(0.736)	NULL
CCDC96	257236	genome.wustl.edu	37	4	7043295	7043295	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153376.2	-1	validated	p.N457	0.013	197	0%	147	40.1%	6	33.3%	-	-	-	NULL
PSAPL1	768239	genome.wustl.edu	37	4	7436243	7436243	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085382.1	-1	validated	p.L122F	0.117	9	0.000	6	0.667	0	-	possibly_damaging(0.76)	deleterious(0.01)	deleterious(0.687)	HMMPfam_SapB_2,HMMSmart_SapB,superfamily_Saposin_like
SORCS2	57537	genome.wustl.edu	37	4	7668907	7668907	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000507866	+1	known	p.P343S	0.998	151	0%	112	37.5%	0	-	-	-	-	HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase
AFAP1	60312	genome.wustl.edu	37	4	7873679	7873679	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134647.1	-1	reviewed	p.G43C	1.000	426	0%	221	13.1%	1	100%	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	NULL
MIR95	407052	genome.wustl.edu	37	4	8007083	8007083	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000385072	-1	known	NULL	1.000	47	2.1%	33	36.4%	0	-	-	-	-	-
SH3TC1	54436	genome.wustl.edu	37	4	8219976	8219976	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000382516	+1	known	p.R11I	0.001	42	0%	33	33.3%	0	-	benign(0.359)	deleterious(0.05)	neutral(0.459)	NULL
HTRA3	94031	genome.wustl.edu	37	4	8288441	8288441	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053044.2	+1	provisional	p.D213	0.060	18	0%	15	46.7%	24	0%	-	-	-	HMMPfam_Trypsin,superfamily_Trypsin-like serine proteases
ACOX3	8310	genome.wustl.edu	37	4	8375309	8375309	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003501.2	-1	validated	p.A625	1.000	24	0%	15	46.7%	6	66.6%	-	-	-	HMMPfam_ACOX,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like
SLC2A9	56606	genome.wustl.edu	37	4	9909890	9909890	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020041.2	-1	reviewed	p.G361E	0.836	98	0%	58	13.8%	8	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter
WDR1	9948	genome.wustl.edu	37	4	10105549	10105549	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017491.3	-1	reviewed	p.A67V	0.998	27	0%	22	45.5%	213	47.8%	possibly_damaging(0.498)	deleterious(0.01)	deleterious(0.572)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDR1	9948	genome.wustl.edu	37	4	10117777	10117777	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017491.3	-1	reviewed	p.L33P	1.000	32	0%	27	51.9%	200	46.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40 repeat-like
CLNK	116449	genome.wustl.edu	37	4	10515153	10515153	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052964.2	-1	validated	p.E281K	0.000	153	0%	56	37.5%	0	-	benign(0.343)	tolerated(0.14)	neutral(0.357)	superfamily_SH2 domain
BOD1L	259282	genome.wustl.edu	37	4	13601793	13601793	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148894.2	-1	validated	p.G2244D	0.000	52	0%	53	41.5%	13	53.8%	benign(0.17)	deleterious(0.02)	neutral(0.399)	superfamily_SSF81995
BOD1L	259282	genome.wustl.edu	37	4	13604599	13604599	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148894.2	-1	validated	p.V1309L	0.000	199	0%	94	47.9%	5	40%	benign(0.243)	deleterious(0.01)	neutral(0.430)	superfamily_SSF81995
BOD1L	259282	genome.wustl.edu	37	4	13612569	13612569	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148894.2	-1	validated	p.R494*	1.000	337	0%	123	43.9%	3	33.3%	-	-	-	superfamily_SSF81995
BOD1L	259282	genome.wustl.edu	37	4	13612676	13612676	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148894.2	-1	validated	p.S458F	0.000	527	0%	162	43.2%	0	-	possibly_damaging(0.929)	deleterious(0.02)	deleterious(0.759)	superfamily_SSF81995
C1QTNF7	114905	genome.wustl.edu	37	4	15437388	15437388	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135170.1	+1	validated	p.V14	0.655	217	0%	101	42.6%	0	-	-	-	-	NULL
CC2D2A	57545	genome.wustl.edu	37	4	15516445	15516445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080522.2	+1	reviewed	p.R278Q	0.000	199	0%	118	24.6%	5	0%	benign(0.027)	tolerated(0.38)	neutral(0.019)	NULL
CC2D2A	57545	genome.wustl.edu	37	4	15581689	15581689	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080522.2	+1	reviewed	p.V1290	0.946	215	0%	101	42.6%	4	50%	-	-	-	NULL
CC2D2A	57545	genome.wustl.edu	37	4	15591204	15591204	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080522.2	+1	reviewed	p.R1406C	1.000	368	0.3%	161	14.9%	4	0%	possibly_damaging(0.847)	tolerated(0.05)	deleterious(0.670)	NULL
FBXL5	26234	genome.wustl.edu	37	4	15626993	15626993	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000513163	-1	known	p.I498T	0.064	328	0.3%	155	38.1%	44	0%	-	-	-	superfamily_RNI-like
FBXL5	26234	genome.wustl.edu	37	4	15627499	15627499	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012161.2	-1	reviewed	p.G409V	1.000	131	0%	80	51.2%	17	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_RNI-like
FAM200B	285550	genome.wustl.edu	37	4	15689066	15689066	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145191.1	+1	validated	p.R156C	0.997	168	0%	53	39.6%	0	-	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	NULL
FAM200B	285550	genome.wustl.edu	37	4	15689841	15689841	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145191.1	+1	validated	p.S414Y	1.000	92	0%	42	40.5%	3	100%	probably_damaging(0.996)	tolerated(0.05)	deleterious(0.807)	NULL
BST1	683	genome.wustl.edu	37	4	15733373	15733373	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004334.2	+1	validated	p.A288T	0.000	77	0%	63	36.5%	0	-	benign(0)	tolerated(0.67)	neutral(0.003)	NULL
PROM1	8842	genome.wustl.edu	37	4	16008174	16008174	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006017.2	-1	reviewed	p.V481I	1.000	24	0%	16	50%	27	96.2%	benign(0.037)	tolerated(0.84)	neutral(0.003)	HMMPfam_Prominin
TAPT1	202018	genome.wustl.edu	37	4	16204185	16204185	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153365.2	-1	reviewed	p.F117V	1.000	135	0%	82	43.9%	17	76.4%	possibly_damaging(0.68)	tolerated(0.07)	deleterious(0.561)	NULL
LDB2	9079	genome.wustl.edu	37	4	16760786	16760786	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001290.3	-1	validated	p.R77Q	1.000	160	0%	56	37.5%	4	0%	possibly_damaging(0.92)	deleterious(0.01)	deleterious(0.776)	HMMPfam_LIM_bind
FAM184B	27146	genome.wustl.edu	37	4	17710568	17710568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015688.1	-1	validated	p.R281C	1.000	48	0%	46	32.6%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM184B	27146	genome.wustl.edu	37	4	17710912	17710912	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015688.1	-1	validated	p.T166M	0.000	7	0.000	7	0.571	0	-	possibly_damaging(0.861)	deleterious(0.02)	deleterious(0.716)	NULL
NCAPG	64151	genome.wustl.edu	37	4	17836072	17836072	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022346.3	+1	validated	p.E679*	0.125	288	0%	77	45.5%	8	0%	-	-	-	superfamily_ARM-type_fold
LCORL	254251	genome.wustl.edu	37	4	17910716	17910716	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153686.7	-1	reviewed	e5+1	1.000	343	0%	168	44.6%	0	-	-	-	-	-
SLIT2	9353	genome.wustl.edu	37	4	20490458	20490458	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004787.1	+1	provisional	p.N210H	1.000	79	0%	59	50.8%	2	50%	benign(0.002)	tolerated(0.63)	neutral(0.004)	HMMSmart_SM00082,superfamily_L domain-like
GPR125	166647	genome.wustl.edu	37	4	22415322	22415322	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145290.2	-1	validated	p.R642H	1.000	172	0%	62	59.7%	14	35.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
GPR125	166647	genome.wustl.edu	37	4	22449125	22449125	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145290.2	-1	validated	p.S161	0.991	208	0%	52	44.2%	12	33.3%	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
GBA3	57733	genome.wustl.edu	37	4	22749494	22749494	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020973.3	+1	validated	p.E288*	0.365	168	0%	78	51.3%	0	-	-	-	-	HMMPfam_Glyco_hydro_1,superfamily_(Trans)glycosidases
DHX15	1665	genome.wustl.edu	37	4	24577866	24577866	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001358.2	-1	reviewed	p.Q169H	1.000	166	0%	93	47.3%	69	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_AAA,HMMSmart_DEXDc,superfamily_SSF52540
SEPSECS	51091	genome.wustl.edu	37	4	25158576	25158576	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016955.3	-1	validated	p.R18Q	1.000	120	0%	94	50%	4	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_SLA_LP_auto_ag,superfamily_PLP-dependent transferases
PI4K2B	55300	genome.wustl.edu	37	4	25270809	25270809	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018323.3	+1	validated	p.S419Y	1.000	542	0%	246	13%	16	6.2%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_PI3_PI4_kinase
ZCCHC4	29063	genome.wustl.edu	37	4	25334976	25334976	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000505412	+1	known	p.E32*	1.000	175	0%	90	41.1%	3	33.3%	benign(0.368)	tolerated(0.48)	neutral(0.128)	NULL
ZCCHC4	29063	genome.wustl.edu	37	4	25335610	25335610	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024936.2	+1	validated	p.R229Q	1.000	306	0.3%	141	33.3%	1	0%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
SEL1L3	23231	genome.wustl.edu	37	4	25835175	25835175	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015187.3	-1	validated	p.W293R	1.000	223	0%	88	18.2%	14	7.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ARAP2	116984	genome.wustl.edu	37	4	36069768	36069768	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015230.2	-1	reviewed	p.R1626*	0.997	163	0%	62	40.3%	7	57.1%	-	-	-	NULL
ARAP2	116984	genome.wustl.edu	37	4	36122833	36122833	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015230.2	-1	reviewed	p.D1288Y	1.000	166	0.6%	20	35%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ARAP2	116984	genome.wustl.edu	37	4	36179496	36179496	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015230.2	-1	reviewed	p.F604V	1.000	369	0%	110	50%	3	66.6%	possibly_damaging(0.79)	deleterious(0.01)	deleterious(0.702)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ARAP2	116984	genome.wustl.edu	37	4	36212358	36212358	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015230.2	-1	reviewed	p.D381N	1.000	380	0%	99	39.4%	1	100%	benign(0.323)	deleterious(0.01)	deleterious(0.507)	NULL
DTHD1	401124	genome.wustl.edu	37	4	36292233	36292233	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136536.3	+1	validated	p.Y86H	1.000	278	0%	120	10.8%	0	-	possibly_damaging(0.873)	tolerated(0.33)	neutral(0.363)	NULL
KIAA1239	57495	genome.wustl.edu	37	4	37447155	37447155	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144990.1	+1	validated	p.D1182G	1.000	47	0%	28	46.4%	0	-	benign(0.253)	deleterious(0.04)	neutral(0.375)	superfamily_WD40_like
PGM2	55276	genome.wustl.edu	37	4	37848718	37848718	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018290.3	+1	validated	p.G392C	1.000	197	0%	122	45.9%	19	36.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_A-D-PHexomutase_a/b/a-I/II/III
TBC1D1	23216	genome.wustl.edu	37	4	38020009	38020009	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015173.2	+1	validated	p.D306G	1.000	442	0%	207	25.1%	20	35%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
KLF3	51274	genome.wustl.edu	37	4	38698844	38698844	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016531.5	+1	validated	p.D333G	1.000	122	0%	73	28.8%	73	47.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
KLHL5	51088	genome.wustl.edu	37	4	39064158	39064158	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015990.4	+1	validated	p.L8	0.751	229	0%	119	40.3%	0	-	-	-	-	NULL
KLHL5	51088	genome.wustl.edu	37	4	39088217	39088217	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015990.4	+1	validated	p.D374G	1.000	218	0%	67	22.4%	7	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_BACK
WDR19	57728	genome.wustl.edu	37	4	39217801	39217801	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025132.3	+1	reviewed	p.R407Q	1.000	464	0.2%	160	43.8%	12	41.6%	probably_damaging(0.961)	tolerated(0.13)	deleterious(0.657)	NULL
WDR19	57728	genome.wustl.edu	37	4	39229839	39229839	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025132.3	+1	reviewed	p.A547T	0.010	200	0%	75	46.7%	7	42.8%	benign(0)	tolerated(0.41)	neutral(0.015)	superfamily_C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
WDR19	57728	genome.wustl.edu	37	4	39276564	39276564	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025132.3	+1	reviewed	p.I1234	0.979	86	0%	66	34.8%	28	64.2%	-	-	-	NULL
RFC1	5981	genome.wustl.edu	37	4	39304177	39304177	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002913.3	-1	reviewed	p.K793	1.000	385	0%	127	35.4%	21	61.9%	-	-	-	superfamily_SSF52540
RFC1	5981	genome.wustl.edu	37	4	39328215	39328215	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002913.3	-1	reviewed	p.A204T	0.999	323	0%	139	46%	12	50%	probably_damaging(1)	tolerated(0.43)	deleterious(0.513)	NULL
KLB	152831	genome.wustl.edu	37	4	39435845	39435845	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175737.3	+1	validated	p.W281R	1.000	68	0%	37	43.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
PDS5A	23244	genome.wustl.edu	37	4	39864550	39864550	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100399.1	-1	reviewed	p.Q970H	1.000	202	0%	85	40%	71	53.5%	benign(0.33)	tolerated(0.36)	neutral(0.123)	superfamily_ARM repeat
PDS5A	23244	genome.wustl.edu	37	4	39921976	39921976	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100399.1	-1	reviewed	p.K233T	1.000	282	0%	89	44.9%	30	30%	benign(0.205)	tolerated(0.51)	neutral(0.029)	superfamily_ARM repeat
N4BP2	55728	genome.wustl.edu	37	4	40122539	40122539	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018177.3	+1	reviewed	p.Q936H	0.996	85	0%	31	35.5%	5	60%	possibly_damaging(0.653)	deleterious(0)	deleterious(0.674)	NULL
CHRNA9	55584	genome.wustl.edu	37	4	40351124	40351124	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017581.2	+1	reviewed	p.F197L	1.000	92	0%	51	39.2%	0	-	benign(0.146)	tolerated(0.07)	neutral(0.332)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
NSUN7	79730	genome.wustl.edu	37	4	40752997	40752997	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024677.4	+1	validated	p.S96I	1.000	78	0%	55	43.6%	8	50%	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	NULL
APBB2	323	genome.wustl.edu	37	4	40892410	40892410	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000513611	-1	known	p.R469C	0.350	10	0.000	7	0.571	5	0%	-	-	-	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
APBB2	323	genome.wustl.edu	37	4	41015600	41015600	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173075.4	-1	reviewed	p.D279N	1.000	42	0%	34	41.2%	8	25%	benign(0.001)	tolerated(0.18)	neutral(0.056)	NULL
LIMCH1	22998	genome.wustl.edu	37	4	41684454	41684454	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508466	+1	known	p.V724A	0.000	139	0%	54	37%	14	57.1%	-	-	-	NULL
BEND4	389206	genome.wustl.edu	37	4	42122095	42122095	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207406.3	-1	validated	p.P455S	1.000	117	0%	60	13.3%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMPfam_BEN
SHISA3	152573	genome.wustl.edu	37	4	42403167	42403167	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080505.1	+1	provisional	p.R139H	1.000	117	0%	123	38.2%	2	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
ATP8A1	10396	genome.wustl.edu	37	4	42524203	42524203	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006095.2	-1	reviewed	p.E641K	0.998	58	0%	23	34.8%	2	50%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N
ATP8A1	10396	genome.wustl.edu	37	4	42618091	42618091	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006095.2	-1	reviewed	p.R123Q	1.000	701	0%	297	41.1%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_E1-E2_ATPase
GUF1	60558	genome.wustl.edu	37	4	44691961	44691961	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021927.2	+1	validated	p.K435T	1.000	317	0%	86	45.3%	5	60%	benign(0.02)	deleterious(0.02)	neutral(0.384)	NULL
GABRG1	2565	genome.wustl.edu	37	4	46086013	46086013	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173536.3	-1	reviewed	p.P104L	1.000	282	0%	34	44.1%	0	-	benign(0.253)	deleterious(0.02)	neutral(0.409)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
GABRA2	2555	genome.wustl.edu	37	4	46388112	46388112	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000807.2	-1	reviewed	p.R56W	1.000	261	0%	112	10.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
GABRA4	2557	genome.wustl.edu	37	4	46967008	46967008	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000809.2	-1	reviewed	p.K371N	0.774	215	0%	35	28.6%	0	-	benign(0.345)	tolerated(0.05)	neutral(0.454)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
GABRA4	2557	genome.wustl.edu	37	4	46979445	46979445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000809.2	-1	reviewed	p.T159I	1.000	391	0%	61	47.5%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
ATP10D	57205	genome.wustl.edu	37	4	47537563	47537563	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020453.3	+1	validated	p.E272*	1.000	313	0%	103	44.7%	1	0%	-	-	-	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A
CORIN	10699	genome.wustl.edu	37	4	47605608	47605608	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006587.2	-1	reviewed	p.R873H	0.258	85	1.2%	51	43.1%	0	-	possibly_damaging(0.89)	tolerated(0.56)	neutral(0.356)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
CNGA1	1259	genome.wustl.edu	37	4	47938750	47938750	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142564.1	-1	reviewed	p.E656D	1.000	59	0%	27	37%	0	-	possibly_damaging(0.701)	tolerated(0.38)	neutral(0.270)	HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like
NIPAL1	152519	genome.wustl.edu	37	4	48036909	48036909	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207330.1	+1	provisional	p.S158Y	1.000	115	0%	57	57.9%	5	60%	unknown(0)	-	-	HMMPfam_DUF803,superfamily_SSF103481
NIPAL1	152519	genome.wustl.edu	37	4	48037803	48037803	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207330.1	+1	provisional	p.L283I	0.723	268	0%	139	26.6%	4	0%	probably_damaging(0.998)	tolerated(0.05)	deleterious(0.820)	HMMPfam_DUF803
SLAIN2	57606	genome.wustl.edu	37	4	48424089	48424089	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020846.1	+1	validated	p.Y581H	1.000	151	0%	48	41.7%	42	59.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FRYL	285527	genome.wustl.edu	37	4	48542519	48542519	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015030.1	-1	validated	p.S2049N	0.999	238	0%	67	50.7%	14	57.1%	benign(0)	tolerated(0.4)	neutral(0.016)	superfamily_ARM repeat
FRYL	285527	genome.wustl.edu	37	4	48542802	48542802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015030.1	-1	validated	p.R1955W	1.000	162	0%	56	33.9%	15	26.6%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	superfamily_ARM repeat
FRYL	285527	genome.wustl.edu	37	4	48559593	48559593	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015030.1	-1	validated	p.E1334D	0.849	141	0%	76	43.4%	11	45.4%	benign(0)	tolerated(0.48)	neutral(0.011)	NULL
FRYL	285527	genome.wustl.edu	37	4	48605367	48605367	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015030.1	-1	validated	p.N291K	1.000	262	0%	70	35.7%	1	100%	possibly_damaging(0.559)	deleterious(0.01)	deleterious(0.596)	superfamily_ARM repeat
OCIAD1	54940	genome.wustl.edu	37	4	48852084	48852084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079839.2	+1	validated	p.R121Q	0.107	185	0%	89	34.8%	55	40%	possibly_damaging(0.914)	tolerated(0.08)	deleterious(0.666)	NULL
SPATA18	132671	genome.wustl.edu	37	4	52945961	52945961	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145263.2	+1	provisional	p.V411I	1.000	179	0.6%	104	47.1%	2	0%	possibly_damaging(0.523)	tolerated(0.38)	neutral(0.194)	NULL
GSX2	170825	genome.wustl.edu	37	4	54968021	54968021	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133267.2	+1	validated	p.R283C	0.997	17	0%	18	44.4%	0	-	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
PDGFRA	5156	genome.wustl.edu	37	4	55143645	55143645	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006206.4	+1	reviewed	p.V626A	1.000	203	0%	127	33.9%	16	56.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP
KIT	3815	genome.wustl.edu	37	4	55602953	55602953	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000222.2	+1	reviewed	p.R888Q	0.999	94	1.1%	59	39%	1	0%	probably_damaging(0.972)	tolerated(0.44)	neutral(0.426)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
KDR	3791	genome.wustl.edu	37	4	55946181	55946181	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002253.2	-1	reviewed	p.G1333E	0.001	153	0%	102	45.1%	7	0%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
KDR	3791	genome.wustl.edu	37	4	55946287	55946287	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002253.2	-1	reviewed	p.G1298S	1.000	124	0%	85	36.5%	8	0%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
KDR	3791	genome.wustl.edu	37	4	55964348	55964348	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002253.2	-1	reviewed	p.Y822C	0.999	76	0%	27	37%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Kinase_like
EXOC1	55763	genome.wustl.edu	37	4	56726704	56726704	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024924.1	+1	reviewed	p.I84	0.999	125	0%	64	40.6%	4	0%	-	-	-	NULL
CEP135	9662	genome.wustl.edu	37	4	56885719	56885719	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025009.3	+1	validated	p.K1071N	0.995	197	0%	57	42.1%	7	42.8%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
KIAA1211	57482	genome.wustl.edu	37	4	57180353	57180353	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020722.1	+1	validated	p.R229*	1.000	29	0%	26	50%	1	0%	-	-	-	NULL
AASDH	132949	genome.wustl.edu	37	4	57219696	57219696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181806.2	-1	validated	p.L484I	1.000	197	0%	56	46.4%	2	50%	probably_damaging(0.998)	tolerated(0.15)	deleterious(0.716)	superfamily_Acetyl-CoA synthetase-like
PPAT	5471	genome.wustl.edu	37	4	57261570	57261570	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002703.3	-1	reviewed	p.G501D	1.000	650	0.2%	266	39.5%	13	46.1%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	superfamily_PRTase-like
REST	5978	genome.wustl.edu	37	4	57796740	57796740	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005612.3	+1	reviewed	p.N572	0.000	34	0%	20	45%	3	66.6%	-	-	-	NULL
REST	5978	genome.wustl.edu	37	4	57797767	57797767	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005612.3	+1	reviewed	p.E915K	0.004	109	0%	45	44.4%	13	53.8%	possibly_damaging(0.945)	deleterious(0.01)	deleterious(0.795)	NULL
NOA1	84273	genome.wustl.edu	37	4	57832797	57832797	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032313.2	-1	provisional	p.T585A	0.000	73	0%	35	20%	46	36.9%	benign(0.005)	tolerated(0.57)	neutral(0.006)	NULL
POLR2B	5431	genome.wustl.edu	37	4	57871577	57871577	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000938.1	+1	reviewed	p.F356V	1.000	577	0%	230	46.5%	20	45%	benign(0.148)	tolerated(0.3)	neutral(0.042)	HMMPfam_RNA_pol_Rpb2_2,HMMPfam_RNA_pol_Rpb2_1,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
POLR2B	5431	genome.wustl.edu	37	4	57881683	57881683	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000938.1	+1	reviewed	p.D606N	1.000	281	0%	90	27.8%	35	51.4%	possibly_damaging(0.483)	deleterious(0.02)	deleterious(0.543)	HMMPfam_RNA_pol_Rpb2_4,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
LPHN3	23284	genome.wustl.edu	37	4	62542600	62542600	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015236.4	+1	reviewed	p.P109L	1.000	283	0.4%	80	46.3%	5	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Gal_Lectin
LPHN3	23284	genome.wustl.edu	37	4	62599030	62599030	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015236.4	+1	reviewed	p.G318E	1.000	208	0.5%	74	37.8%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_OLF,HMMSmart_SM00284
LPHN3	23284	genome.wustl.edu	37	4	62758467	62758467	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015236.4	+1	reviewed	p.P457L	0.991	108	0%	55	41.8%	4	50%	benign(0.008)	deleterious(0.01)	neutral(0.406)	NULL
LPHN3	23284	genome.wustl.edu	37	4	62849182	62849182	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015236.4	+1	reviewed	p.L965I	1.000	397	0%	165	13.9%	7	14.2%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	HMMPfam_7tm_2,superfamily_Family A G protein-coupled receptor-like
CENPC1	1060	genome.wustl.edu	37	4	68359628	68359628	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001812.2	-1	reviewed	p.R755Q	0.992	313	0%	127	46.5%	9	44.4%	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	NULL
UBA6	55236	genome.wustl.edu	37	4	68490841	68490841	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018227.5	-1	validated	p.F861L	0.988	225	0%	103	44.7%	27	48.1%	possibly_damaging(0.792)	deleterious(0.05)	deleterious(0.642)	HMMPfam_UBACT,superfamily_Activating enzymes of the ubiquitin-like proteins
UBA6	55236	genome.wustl.edu	37	4	68530940	68530940	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018227.5	-1	validated	p.A288	1.000	191	0%	65	46.2%	6	66.6%	-	-	-	superfamily_Activating enzymes of the ubiquitin-like proteins
GNRHR	2798	genome.wustl.edu	37	4	68606319	68606319	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000406.2	-1	reviewed	p.W289*	1.000	219	0%	61	16.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GNRHR	2798	genome.wustl.edu	37	4	68619854	68619854	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000406.2	-1	reviewed	p.K67R	1.000	104	0%	34	47.1%	0	-	benign(0.02)	tolerated(0.58)	neutral(0.006)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
TMPRSS11A	339967	genome.wustl.edu	37	4	68810272	68810272	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182606.3	-1	validated	p.Q73*	0.014	702	0%	210	42.4%	0	-	-	-	-	HMMPfam_SEA,superfamily_SEA domain
TMPRSS11F	389208	genome.wustl.edu	37	4	68930607	68930607	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207407.2	-1	validated	p.A271T	0.020	223	0.4%	94	45.7%	0	-	benign(0.141)	tolerated(0.41)	neutral(0.027)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
TMPRSS11F	389208	genome.wustl.edu	37	4	68934367	68934367	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207407.2	-1	validated	p.W242R	0.981	17	0%	22	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
TMPRSS11B	132724	genome.wustl.edu	37	4	69095041	69095041	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182502.3	-1	validated	p.A294S	0.998	322	0%	126	39.7%	0	-	probably_damaging(0.996)	tolerated(0.26)	deleterious(0.496)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
TMPRSS11B	132724	genome.wustl.edu	37	4	69097088	69097088	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182502.3	-1	validated	p.R173S	0.023	152	0%	66	15.2%	0	-	probably_damaging(0.993)	tolerated(0.86)	neutral(0.451)	superfamily_Trypsin-like serine proteases
UGT2B15	7366	genome.wustl.edu	37	4	69535817	69535817	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076.2	-1	validated	p.R174*	0.893	201	0.5%	85	52.9%	0	-	-	-	-	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT2B7	7364	genome.wustl.edu	37	4	69962817	69962817	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001074.2	+1	validated	p.Y193	0.989	409	0%	153	24.2%	0	-	-	-	-	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT2A1	10941	genome.wustl.edu	37	4	70460369	70460369	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006798.2	-1	validated	p.G377E	1.000	166	0%	62	33.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UDPGT,PatternScan_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT2A2	574537	genome.wustl.edu	37	4	70504953	70504953	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105677.1	-1	inferred	p.D128N	1.000	200	0%	78	35.9%	0	-	benign(0.042)	tolerated(0.1)	neutral(0.289)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
SULT1B1	27284	genome.wustl.edu	37	4	70592861	70592861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014465.3	-1	reviewed	p.A279V	0.131	377	0%	85	47.1%	0	-	benign(0)	tolerated(0.12)	neutral(0.261)	HMMPfam_Sulfotransfer_1,superfamily_SSF52540
SULT1E1	6783	genome.wustl.edu	37	4	70710038	70710038	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005420.2	-1	reviewed	p.K205Q	0.073	285	0%	146	40.4%	0	-	benign(0.107)	deleterious(0.01)	neutral(0.414)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
FDCSP	260436	genome.wustl.edu	37	4	71099825	71099825	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152997.2	+1	validated	p.R60I	0.000	466	0.2%	79	45.6%	7	100%	possibly_damaging(0.681)	-	-	NULL
CABS1	85438	genome.wustl.edu	37	4	71201276	71201276	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033122.3	+1	validated	p.A174T	0.001	69	0%	29	51.7%	0	-	benign(0.355)	tolerated(0.19)	neutral(0.162)	NULL
AMBN	258	genome.wustl.edu	37	4	71459089	71459089	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016519.4	+1	reviewed	p.L21	0.988	357	0%	136	41.2%	0	-	-	-	-	HMMPfam_Amelin,HMMSmart_SM00817
AMBN	258	genome.wustl.edu	37	4	71472154	71472154	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016519.4	+1	reviewed	p.A351T	0.536	47	0%	26	42.3%	0	-	benign(0.003)	tolerated(0.18)	neutral(0.056)	HMMPfam_Amelin,HMMSmart_SM00817
ENAM	10117	genome.wustl.edu	37	4	71507895	71507895	+	Missense_Mutation	SNP	C	C	T	rs188769287	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031889.2	+1	reviewed	p.T251M	0.760	174	0%	57	14%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ENAM	10117	genome.wustl.edu	37	4	71509321	71509321	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031889.2	+1	reviewed	p.E726D	0.944	135	0%	58	41.4%	0	-	benign(0.294)	tolerated(0.18)	neutral(0.147)	NULL
UTP3	57050	genome.wustl.edu	37	4	71555772	71555772	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020368.2	+1	validated	p.R460C	0.692	278	0%	114	44.7%	38	39.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sas10_Utp3_C
RUFY3	22902	genome.wustl.edu	37	4	71630223	71630223	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037442.2	+1	validated	p.R168C	1.000	235	0%	103	36.9%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RUN,HMMSmart_SM00593
RUFY3	22902	genome.wustl.edu	37	4	71630243	71630243	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037442.2	+1	validated	p.K174N	1.000	241	0%	98	48%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RUN,HMMSmart_SM00593
GRSF1	2926	genome.wustl.edu	37	4	71693715	71693715	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002092.3	-1	reviewed	p.R330Q	1.000	388	0%	201	47.8%	118	49.1%	possibly_damaging(0.592)	tolerated(0.12)	neutral(0.465)	superfamily_RNA-binding domain RBD
SLC4A4	8671	genome.wustl.edu	37	4	72120991	72120991	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134742.1	+1	reviewed	p.R43I	1.000	216	0%	63	31.7%	1	100%	possibly_damaging(0.921)	deleterious(0)	deleterious(0.816)	NULL
GC	2638	genome.wustl.edu	37	4	72629651	72629651	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000583.2	-1	reviewed	p.F159S	0.999	130	0%	35	37.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Serum albumin-like,HMMPfam_Serum_albumin,HMMSmart_SM00103
ADAMTS3	9508	genome.wustl.edu	37	4	73205332	73205332	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014243.1	-1	reviewed	p.R247H	0.643	134	0.7%	52	46.2%	1	0%	benign(0.012)	tolerated(0.08)	neutral(0.300)	NULL
COX18	285521	genome.wustl.edu	37	4	73933815	73933815	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000438579	-1	known	p.Y123*	0.994	238	0%	136	44.1%	12	58.3%	-	-	-	NULL
ANKRD17	26057	genome.wustl.edu	37	4	73951145	73951145	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032217.3	-1	reviewed	p.S2327L	0.987	87	0%	45	51.1%	36	47.2%	possibly_damaging(0.873)	deleterious(0.02)	deleterious(0.722)	NULL
ANKRD17	26057	genome.wustl.edu	37	4	73964166	73964166	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032217.3	-1	reviewed	p.T1549A	1.000	301	0%	128	38.3%	12	33.3%	benign(0.014)	tolerated(0.71)	neutral(0.002)	NULL
ANKRD17	26057	genome.wustl.edu	37	4	74014649	74014649	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032217.3	-1	reviewed	p.A483V	1.000	119	0%	60	56.7%	19	68.4%	benign(0.114)	tolerated(0.41)	neutral(0.024)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
AFP	174	genome.wustl.edu	37	4	74310721	74310721	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134.1	+1	reviewed	p.K242R	0.000	118	0%	62	40.3%	0	-	possibly_damaging(0.533)	tolerated(1)	neutral(0.180)	superfamily_Serum_albumin,HMMPfam_Serum_albumin,HMMSmart_ALBUMIN
AFP	174	genome.wustl.edu	37	4	74313300	74313300	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134.1	+1	reviewed	p.K322T	0.975	114	0%	49	14.3%	0	-	benign(0.037)	tolerated(0.36)	neutral(0.022)	superfamily_Serum_albumin,HMMPfam_Serum_albumin,HMMSmart_ALBUMIN
AFM	173	genome.wustl.edu	37	4	74361043	74361043	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001133.2	+1	reviewed	p.H362R	0.992	217	0%	35	42.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Serum albumin-like,HMMPfam_Serum_albumin,HMMSmart_SM00103
CXCL2	2920	genome.wustl.edu	37	4	74964334	74964334	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002089.3	-1	validated	p.E98K	0.000	212	0%	168	38.7%	3	33.3%	benign(0)	tolerated(0.38)	neutral(0.018)	HMMPfam_IL8,HMMSmart_SM00199,superfamily_Interleukin 8-like chemokines
BTC	685	genome.wustl.edu	37	4	75681119	75681119	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000512743	-1	known	p.A56V	0.999	181	0%	100	33%	0	-	-	-	-	NULL
PARM1	25849	genome.wustl.edu	37	4	75938361	75938361	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015393.2	+1	validated	e2+1	1.000	60	0%	40	15%	0	-	-	-	-	-
G3BP2	9908	genome.wustl.edu	37	4	76580343	76580343	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012297.4	-1	validated	p.P211	0.963	499	0%	225	41.3%	67	59.7%	-	-	-	NULL
PPEF2	5470	genome.wustl.edu	37	4	76781991	76781991	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006239.2	-1	reviewed	p.I697	1.000	68	0%	45	11.1%	0	-	-	-	-	HMMSmart_SM00054,superfamily_EF-hand
NUP54	53371	genome.wustl.edu	37	4	77039288	77039288	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017426.2	-1	reviewed	p.E408	0.998	240	0%	127	18.9%	44	15.9%	-	-	-	NULL
CCDC158	339965	genome.wustl.edu	37	4	77288468	77288468	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042784.1	-1	validated	p.R603	0.219	137	0%	70	11.4%	0	-	-	-	-	NULL
SOWAHB	345079	genome.wustl.edu	37	4	77817944	77817944	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029870.1	-1	provisional	p.D353	0.000	12	0%	15	40%	1	100%	-	-	-	NULL
SEPT11	55752	genome.wustl.edu	37	4	77955651	77955651	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018243.2	+1	validated	p.A426T	1.000	73	0%	24	37.5%	32	40.6%	unknown(0)	tolerated(0.19)	-	NULL
FRAS1	80144	genome.wustl.edu	37	4	79158708	79158708	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025074.6	+1	reviewed	p.C51	1.000	76	0%	54	16.7%	2	0%	-	-	-	HMMSmart_SM00214,PatternScan_VWFC_1,HMMSmart_SM00215
FRAS1	80144	genome.wustl.edu	37	4	79166390	79166390	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025074.6	+1	reviewed	p.E74*	1.000	173	0%	90	42.2%	2	0%	-	-	-	HMMSmart_SM00214,PatternScan_VWFC_1,HMMSmart_SM00215
FRAS1	80144	genome.wustl.edu	37	4	79429981	79429981	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025074.6	+1	reviewed	p.P3200S	1.000	52	0%	29	44.8%	17	41.1%	benign(0.394)	tolerated(0.16)	neutral(0.186)	NULL
FRAS1	80144	genome.wustl.edu	37	4	79434608	79434608	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025074.6	+1	reviewed	p.P3358L	1.000	151	0%	75	17.3%	23	8.6%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
BMP2K	55589	genome.wustl.edu	37	4	79800024	79800024	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198892.1	+1	reviewed	p.E644*	1.000	224	0%	87	46%	4	25%	-	-	-	NULL
BMP2K	55589	genome.wustl.edu	37	4	79832454	79832454	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198892.1	+1	reviewed	p.E918G	0.012	101	0%	42	38.1%	2	0%	unknown(0)	deleterious(0)	-	NULL
GK2	2712	genome.wustl.edu	37	4	80329159	80329159	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033214.2	-1	validated	p.E66K	1.000	415	0%	253	42.7%	0	-	benign(0.006)	tolerated(0.3)	neutral(0.029)	HMMPfam_FGGY_N,superfamily_SSF53067
FGF5	2250	genome.wustl.edu	37	4	81188263	81188263	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004464.3	+1	reviewed	p.V95	0.998	9	0.000	15	0.467	0	-	-	-	-	HMMPfam_FGF,HMMSmart_SM00442,superfamily_Cytokine
FGF5	2250	genome.wustl.edu	37	4	81207804	81207804	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004464.3	+1	reviewed	p.R262K	1.000	38	0%	12	41.7%	0	-	benign(0.004)	deleterious(0.04)	neutral(0.349)	NULL
SEC31A	22872	genome.wustl.edu	37	4	83788412	83788412	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077207.1	-1	reviewed	p.R314*	0.997	153	0%	101	45.5%	66	10.6%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
THAP9	79725	genome.wustl.edu	37	4	83838804	83838804	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024672.4	+1	validated	p.Q480R	0.641	146	0%	66	43.9%	1	100%	probably_damaging(0.962)	deleterious(0.01)	deleterious(0.810)	NULL
PLAC8	51316	genome.wustl.edu	37	4	84015856	84015856	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130715.1	-1	validated	p.A111V	0.947	234	0%	124	40.3%	2	0%	possibly_damaging(0.513)	tolerated(0.13)	neutral(0.425)	NULL
HPSE	10855	genome.wustl.edu	37	4	84227368	84227368	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098540.1	-1	validated	p.F398	0.361	267	0%	113	41.6%	2	0%	-	-	-	superfamily_(Trans)glycosidases
HELQ	113510	genome.wustl.edu	37	4	84342795	84342795	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133636.2	-1	validated	p.F957C	1.000	397	0%	119	51.3%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NKX6-1	4825	genome.wustl.edu	37	4	85416963	85416963	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006168.2	-1	validated	p.K235N	1.000	118	0%	87	43.7%	4	50%	unknown(0)	deleterious(0.01)	-	HMMSmart_SM00389,superfamily_Homeodomain-like
WDFY3	23001	genome.wustl.edu	37	4	85719193	85719193	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014991.4	-1	reviewed	p.R964M	1.000	644	0%	370	40%	5	20%	possibly_damaging(0.685)	deleterious(0.02)	deleterious(0.627)	NULL
ARHGAP24	83478	genome.wustl.edu	37	4	86844897	86844897	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025616.2	+1	validated	p.R122Q	1.000	91	0%	38	44.7%	5	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ARHGAP24	83478	genome.wustl.edu	37	4	86916019	86916019	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025616.2	+1	validated	p.K404N	0.737	101	0%	40	57.5%	5	80%	benign(0)	tolerated(0.34)	neutral(0.023)	NULL
PTPN13	5783	genome.wustl.edu	37	4	87695570	87695570	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080685.2	+1	reviewed	p.S1803	1.000	72	0%	34	32.4%	1	0%	-	-	-	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ
PTPN13	5783	genome.wustl.edu	37	4	87728798	87728798	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080685.2	+1	reviewed	p.F2282	0.340	106	0%	51	43.1%	16	68.7%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
AFF1	4299	genome.wustl.edu	37	4	88047277	88047277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005935.2	+1	validated	p.S860L	0.024	42	0%	26	42.3%	19	31.5%	unknown(0)	tolerated(0.19)	-	HMMPfam_AF-4
HSD17B11	51170	genome.wustl.edu	37	4	88312056	88312056	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016245.3	-1	validated	p.F56C	1.000	179	0%	96	45.8%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
SPARCL1	8404	genome.wustl.edu	37	4	88415308	88415308	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128310.1	-1	validated	p.N215T	0.000	454	0%	222	45%	36	11.1%	benign(0.129)	deleterious(0.02)	neutral(0.394)	NULL
IBSP	3381	genome.wustl.edu	37	4	88732921	88732921	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004967.3	+1	reviewed	p.Y271	0.407	57	0%	24	41.7%	1	0%	-	-	-	HMMPfam_BSP_II
ABCG2	9429	genome.wustl.edu	37	4	89052995	89052995	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004827.2	-1	reviewed	p.R113Q	1.000	154	0%	72	51.4%	0	-	benign(0.006)	tolerated(0.63)	neutral(0.004)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
HERC6	55008	genome.wustl.edu	37	4	89314671	89314671	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017912.3	+1	validated	p.A232	0.016	133	0%	86	47.7%	3	33.3%	-	-	-	superfamily_RCC1/BLIP-II
HERC6	55008	genome.wustl.edu	37	4	89345751	89345751	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017912.3	+1	validated	p.P611H	0.000	430	0%	124	36.3%	5	40%	benign(0.156)	tolerated(0.56)	neutral(0.021)	NULL
HERC6	55008	genome.wustl.edu	37	4	89349834	89349834	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017912.3	+1	validated	p.R680C	0.998	120	0%	39	51.3%	3	33.3%	possibly_damaging(0.847)	deleterious(0)	deleterious(0.770)	superfamily_Hect E3 ligase catalytic domain
HERC5	51191	genome.wustl.edu	37	4	89425479	89425479	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016323.2	+1	reviewed	p.D893	0.493	290	0.3%	97	45.4%	1	100%	-	-	-	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
FAM13A	10144	genome.wustl.edu	37	4	89912197	89912197	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014883.2	-1	validated	p.V178L	1.000	152	0%	88	38.6%	5	60%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
TIGD2	166815	genome.wustl.edu	37	4	90034286	90034286	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145715.2	+1	reviewed	p.N54S	0.842	212	0%	134	42.5%	5	20%	benign(0.004)	tolerated(0.77)	neutral(0.001)	superfamily_Homeodomain_like
GPRIN3	285513	genome.wustl.edu	37	4	90170393	90170393	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198281.2	-1	validated	p.R290H	0.000	31	0%	19	63.2%	8	62.5%	benign(0)	tolerated(0.54)	neutral(0.007)	NULL
GPRIN3	285513	genome.wustl.edu	37	4	90170432	90170432	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198281.2	-1	validated	p.C277Y	0.000	24	0%	17	41.2%	10	30%	benign(0.071)	deleterious(0)	neutral(0.450)	NULL
FAM190A	401145	genome.wustl.edu	37	4	91229834	91229834	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145065.1	+1	validated	p.E133D	0.997	197	0%	59	35.6%	0	-	benign(0.151)	tolerated(0.12)	neutral(0.274)	NULL
FAM190A	401145	genome.wustl.edu	37	4	91234041	91234041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145065.1	+1	validated	p.R451H	0.990	154	0%	48	52.1%	3	33.3%	probably_damaging(0.999)	tolerated(0.41)	deleterious(0.505)	NULL
FAM190A	401145	genome.wustl.edu	37	4	92007141	92007141	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145065.1	+1	validated	p.R738I	1.000	461	0%	115	35.7%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
GRID2	2895	genome.wustl.edu	37	4	94376818	94376818	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001510.2	+1	validated	p.A517	0.002	91	0%	58	48.3%	0	-	-	-	-	HMMSmart_PBPe,superfamily_SSF53850
PDLIM5	10611	genome.wustl.edu	37	4	95444923	95444923	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006457.3	+1	reviewed	p.V49M	0.997	189	0%	73	46.6%	26	57.6%	benign(0.082)	tolerated(0.12)	neutral(0.267)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
BMPR1B	658	genome.wustl.edu	37	4	96052612	96052612	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001203.2	+1	reviewed	p.K342I	1.000	133	0%	53	41.5%	16	56.2%	possibly_damaging(0.529)	tolerated(0.05)	deleterious(0.524)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
UNC5C	8633	genome.wustl.edu	37	4	96171776	96171776	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003728.2	-1	reviewed	p.D213Y	1.000	209	0.5%	83	10.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
C4orf37	285555	genome.wustl.edu	37	4	98633932	98633932	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174952.2	-1	validated	p.S413Y	0.978	334	0%	105	40%	0	-	possibly_damaging(0.519)	deleterious(0.05)	deleterious(0.520)	NULL
C4orf37	285555	genome.wustl.edu	37	4	98761953	98761953	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174952.2	-1	validated	p.R392Q	0.481	171	0%	73	52.1%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
TSPAN5	10098	genome.wustl.edu	37	4	99393738	99393738	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005723.3	-1	reviewed	p.I248V	1.000	60	0%	46	41.3%	3	33.3%	benign(0.012)	tolerated(0.18)	neutral(0.057)	HMMPfam_Tetraspannin
EIF4E	1977	genome.wustl.edu	37	4	99830902	99830902	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000504432	-1	known	p.R10I	0.864	27	0%	21	47.6%	0	-	unknown(0)	tolerated(0.1)	-	NULL
METAP1	23173	genome.wustl.edu	37	4	99966411	99966411	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015143.2	+1	validated	p.R246Q	1.000	245	0%	109	41.3%	65	41.5%	benign(0.003)	tolerated(0.4)	neutral(0.016)	HMMPfam_Peptidase_M24,superfamily_Creatinase/aminopeptidase
METAP1	23173	genome.wustl.edu	37	4	99970013	99970013	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015143.2	+1	validated	p.V306A	1.000	264	0%	73	41.1%	52	51.9%	benign(0.336)	deleterious(0.01)	deleterious(0.512)	HMMPfam_Peptidase_M24,superfamily_Creatinase/aminopeptidase,PatternScan_MAP_1
ADH6	130	genome.wustl.edu	37	4	100131313	100131313	+	Missense_Mutation	SNP	C	C	T	rs61755961	byCluster;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102470.1	-1	reviewed	p.A165T	0.816	234	0.4%	75	45.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_GroES_like
C4orf17	84103	genome.wustl.edu	37	4	100463218	100463218	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032149.2	+1	validated	p.Y344	0.001	144	0%	49	16.3%	0	-	-	-	-	NULL
RG9MTD2	93587	genome.wustl.edu	37	4	100477320	100477320	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134665.1	-1	validated	p.G160*	1.000	801	0%	325	43.7%	4	0%	-	-	-	HMMPfam_tRNA_m1G_MT
MTTP	4547	genome.wustl.edu	37	4	100529959	100529959	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000253.2	+1	reviewed	p.R532C	0.277	96	0%	34	29.4%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_LV_superhelical
BANK1	55024	genome.wustl.edu	37	4	102751159	102751159	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017935.4	+1	reviewed	p.L89M	0.918	206	0%	77	46.8%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
BANK1	55024	genome.wustl.edu	37	4	102751189	102751189	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017935.4	+1	reviewed	p.Q99K	0.937	212	0%	74	43.2%	0	-	benign(0.097)	tolerated(0.56)	neutral(0.014)	NULL
NFKB1	4790	genome.wustl.edu	37	4	103505841	103505841	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003998.3	+1	reviewed	p.F310L	1.000	263	0%	69	40.6%	8	25%	probably_damaging(0.975)	deleterious(0.02)	deleterious(0.800)	superfamily_ANK,HMMPfam_TIG,HMMSmart_IPT,superfamily_Ig_E-set
MANBA	4126	genome.wustl.edu	37	4	103578884	103578884	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005908.3	-1	reviewed	p.S553	1.000	231	0%	77	31.2%	16	75%	-	-	-	HMMPfam_Glyco_hydro_2_C,superfamily_Glyco_hydro_cat
CENPE	1062	genome.wustl.edu	37	4	104054036	104054036	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001813.2	-1	validated	p.F2246L	0.958	339	0%	114	41.2%	6	83.3%	benign(0.042)	tolerated(1)	neutral(0.003)	NULL
CENPE	1062	genome.wustl.edu	37	4	104067039	104067039	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001813.2	-1	validated	p.L1454I	0.994	423	0.2%	184	51.1%	2	50%	benign(0.133)	tolerated(0.06)	neutral(0.334)	NULL
CENPE	1062	genome.wustl.edu	37	4	104079938	104079938	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001813.2	-1	validated	p.L903M	0.063	449	0%	113	46%	4	75%	probably_damaging(0.996)	tolerated(0.33)	deleterious(0.486)	NULL
CENPE	1062	genome.wustl.edu	37	4	104080192	104080192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001813.2	-1	validated	p.S859L	0.000	252	0%	73	49.3%	3	100%	benign(0)	tolerated(0.62)	neutral(0.004)	NULL
TACR3	6870	genome.wustl.edu	37	4	104510929	104510929	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001059.1	-1	reviewed	p.F436L	0.614	209	0%	64	43.8%	0	-	benign(0.032)	tolerated(0.66)	neutral(0.004)	NULL
CXXC4	80319	genome.wustl.edu	37	4	105412285	105412285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025212.1	-1	provisional	p.E56D	1.000	38	0%	29	44.8%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	NULL
TET2	54790	genome.wustl.edu	37	4	106156520	106156520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127208.1	+1	validated	p.P474L	0.020	128	0%	62	41.9%	9	44.4%	benign(0)	tolerated(1)	-	NULL
ARHGEF38	54848	genome.wustl.edu	37	4	106510418	106510418	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017700.1	+1	validated	p.P70	0.974	209	0%	109	41.3%	1	0%	-	-	-	superfamily_DH-domain
GSTCD	79807	genome.wustl.edu	37	4	106640256	106640256	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031720.2	+1	validated	p.L156	0.990	78	0%	38	36.8%	2	50%	-	-	-	superfamily_Glutathione S-transferase (GST) C-terminal domain
TBCK	93627	genome.wustl.edu	37	4	107154110	107154110	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033115.3	-1	validated	p.L479I	1.000	182	0%	47	38.3%	6	16.6%	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	HMMPfam_TBC,HMMSmart_TBC,superfamily_RabGAP_TBC
TBCK	93627	genome.wustl.edu	37	4	107183309	107183309	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000273980	-1	known	p.K109	0.978	260	0%	106	34.9%	7	57.1%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
DKK2	27123	genome.wustl.edu	37	4	107845797	107845797	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014421.2	-1	reviewed	p.T145I	0.997	266	0%	124	43.5%	0	-	benign(0.113)	tolerated(0.15)	neutral(0.250)	NULL
SGMS2	166929	genome.wustl.edu	37	4	108829871	108829871	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136257.1	+1	reviewed	p.S293L	0.997	162	0%	56	55.4%	6	50%	benign(0)	deleterious(0)	neutral(0.445)	NULL
AGXT2L1	64850	genome.wustl.edu	37	4	109672163	109672163	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031279.3	-1	validated	p.F210	1.000	159	0%	80	31.2%	0	-	-	-	-	HMMPfam_Aminotran_3,superfamily_PLP-dependent transferases
CCDC109B	55013	genome.wustl.edu	37	4	110605760	110605760	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017918.4	+1	validated	p.A258	0.684	369	0%	187	33.7%	29	37.9%	-	-	-	HMMPfam_DUF607
CASP6	839	genome.wustl.edu	37	4	110610593	110610593	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001226.3	-1	reviewed	p.R259C	1.000	170	0%	92	32.6%	30	20%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Peptidase_C14,HMMSmart_SM00115,superfamily_Caspase-like
CFI	3426	genome.wustl.edu	37	4	110667381	110667381	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000204.3	-1	reviewed	p.K476Q	0.981	176	0%	97	40.2%	5	0%	probably_damaging(0.978)	tolerated(0.23)	neutral(0.462)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
EGF	1950	genome.wustl.edu	37	4	110895862	110895862	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001963.4	+1	reviewed	p.K576N	0.966	237	0%	86	37.2%	0	-	benign(0.38)	tolerated(0.16)	neutral(0.181)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
EGF	1950	genome.wustl.edu	37	4	110904666	110904666	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001963.4	+1	reviewed	p.Q820	0.000	150	0%	52	34.6%	2	50%	-	-	-	NULL
EGF	1950	genome.wustl.edu	37	4	110908907	110908907	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001963.4	+1	reviewed	p.D833	0.770	133	0%	55	41.8%	2	100%	-	-	-	NULL
ELOVL6	79071	genome.wustl.edu	37	4	110980894	110980894	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130721.1	-1	validated	p.R80*	1.000	76	0%	38	47.4%	14	28.5%	-	-	-	HMMPfam_ELO
ENPEP	2028	genome.wustl.edu	37	4	111427817	111427817	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001977.3	+1	validated	p.Q315*	0.981	180	0.6%	84	47.6%	1	100%	-	-	-	"HMMPfam_Peptidase_M1,superfamily_Metalloproteases (""zincins"") catalytic domain"
ENPEP	2028	genome.wustl.edu	37	4	111482588	111482588	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001977.3	+1	validated	p.P916	0.899	309	0%	138	42%	3	0%	-	-	-	NULL
ALPK1	80216	genome.wustl.edu	37	4	113345129	113345129	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102406.1	+1	validated	p.S169G	1.000	287	0%	125	24%	1	0%	benign(0)	tolerated(0.07)	neutral(0.319)	NULL
ALPK1	80216	genome.wustl.edu	37	4	113351683	113351683	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102406.1	+1	validated	p.E327G	0.953	143	0%	57	12.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
C4orf21	55345	genome.wustl.edu	37	4	113502849	113502849	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000505019	-1	known	p.R1470W	0.996	465	0.2%	146	37%	2	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
C4orf21	55345	genome.wustl.edu	37	4	113508884	113508884	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000505019	-1	known	p.S1110L	0.008	64	0%	19	47.4%	1	0%	benign(0.147)	deleterious(0)	neutral(0.458)	NULL
C4orf21	55345	genome.wustl.edu	37	4	113540240	113540240	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000505019	-1	known	p.T320A	0.000	148	0%	69	42%	1	100%	possibly_damaging(0.942)	tolerated(0.43)	neutral(0.401)	NULL
LARP7	51574	genome.wustl.edu	37	4	113574350	113574350	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015454.1	+1	validated	p.E512*	0.969	196	0%	74	55.4%	20	10%	-	-	-	HMMPfam_RRM_3,superfamily_RNA-binding domain RBD
ANK2	287	genome.wustl.edu	37	4	114275377	114275377	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001148.4	+1	reviewed	p.P1868H	0.390	100	1%	37	35.1%	0	-	possibly_damaging(0.87)	-	-	NULL
ANK2	287	genome.wustl.edu	37	4	114276104	114276104	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001148.4	+1	reviewed	p.V2110	0.000	70	0%	31	51.6%	0	-	-	-	-	NULL
ANK2	287	genome.wustl.edu	37	4	114277290	114277290	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001148.4	+1	reviewed	p.R2506W	1.000	63	0%	17	58.8%	0	-	probably_damaging(1)	-	-	NULL
ANK2	287	genome.wustl.edu	37	4	114277836	114277836	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001148.4	+1	reviewed	p.R2688*	0.997	129	0%	42	54.8%	0	-	-	-	-	NULL
ANK2	287	genome.wustl.edu	37	4	114288935	114288935	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001148.4	+1	reviewed	p.V3749G	0.002	77	0%	20	25%	0	-	possibly_damaging(0.872)	-	-	NULL
ARSJ	79642	genome.wustl.edu	37	4	114824586	114824586	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024590.3	-1	validated	p.P215H	0.994	151	0.7%	84	13.1%	24	12.5%	probably_damaging(0.996)	tolerated(0.08)	deleterious(0.762)	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like
NDST4	64579	genome.wustl.edu	37	4	115858623	115858623	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022569.1	-1	provisional	p.A420T	1.000	108	0%	79	35.4%	0	-	possibly_damaging(0.857)	deleterious(0.01)	deleterious(0.737)	NULL
NDST4	64579	genome.wustl.edu	37	4	115997717	115997717	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022569.1	-1	provisional	p.V159A	1.000	160	0%	36	25%	0	-	probably_damaging(0.968)	deleterious(0.05)	deleterious(0.755)	NULL
METTL14	57721	genome.wustl.edu	37	4	119625187	119625187	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020961.2	+1	provisional	p.A279V	1.000	396	0%	124	40.3%	9	33.3%	possibly_damaging(0.879)	tolerated(0.07)	deleterious(0.661)	HMMPfam_MT-A70
SYNPO2	171024	genome.wustl.edu	37	4	119951081	119951081	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133477.2	+1	validated	p.T384M	0.996	77	1.3%	85	31.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
USP53	54532	genome.wustl.edu	37	4	120181690	120181690	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019050.2	+1	validated	p.R235H	1.000	352	0%	182	44.5%	3	33.3%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_UCH,superfamily_SSF54001
FABP2	2169	genome.wustl.edu	37	4	120241951	120241951	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000134.3	-1	reviewed	p.K38	0.155	196	0%	88	40.9%	0	-	-	-	-	HMMPfam_Lipocalin,superfamily_Lipocalins
PDE5A	8654	genome.wustl.edu	37	4	120463695	120463695	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083.3	-1	reviewed	p.I497	1.000	204	0%	91	39.6%	1	100%	-	-	-	HMMPfam_GAF,HMMSmart_SM00065,superfamily_GAF domain-like
PDE5A	8654	genome.wustl.edu	37	4	120463730	120463730	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083.3	-1	reviewed	p.R486*	1.000	255	0%	92	47.8%	0	-	-	-	-	HMMPfam_GAF,HMMSmart_SM00065,superfamily_GAF domain-like
LOC730456	730456	genome.wustl.edu	37	4	120549878	120549878	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001724855.1	+1	model	p.A50D	0.009	17	0%	14	35.7%	3	66.6%	-	-	-	NULL
MAD2L1	4085	genome.wustl.edu	37	4	120986914	120986914	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002358.3	-1	reviewed	p.R45*	0.949	206	0.5%	107	46.7%	32	0%	-	-	-	HMMPfam_HORMA,superfamily_The spindle assembly checkpoint protein mad2
PRDM5	11107	genome.wustl.edu	37	4	121719426	121719426	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018699.2	-1	reviewed	p.K395T	1.000	159	0%	45	44.4%	0	-	possibly_damaging(0.575)	deleterious(0.03)	deleterious(0.561)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
NDNF	79625	genome.wustl.edu	37	4	121958449	121958449	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024574.3	-1	validated	p.A226V	0.996	264	0%	112	49.1%	2	100%	probably_damaging(0.961)	deleterious(0.02)	deleterious(0.787)	HMMSmart_FN3,superfamily_FN_III-like
QRFPR	84109	genome.wustl.edu	37	4	122257962	122257962	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198179.2	-1	validated	p.E187D	1.000	69	0%	27	44.4%	1	0%	possibly_damaging(0.947)	deleterious(0.04)	deleterious(0.740)	HMMPfam_7tm_1,superfamily_SSF81321
ANXA5	308	genome.wustl.edu	37	4	122604595	122604595	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001154.3	-1	reviewed	p.K76I	1.000	445	0%	169	35.5%	193	54.9%	possibly_damaging(0.63)	deleterious(0)	deleterious(0.664)	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_SM00335
TMEM155	132332	genome.wustl.edu	37	4	122682793	122682793	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152399.2	-1	validated	p.E38*	0.022	147	0%	89	42.7%	0	-	-	-	-	NULL
BBS7	55212	genome.wustl.edu	37	4	122766662	122766662	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176824.1	-1	reviewed	p.I409M	0.982	325	0%	111	44.1%	3	33.3%	benign(0.005)	deleterious(0.02)	neutral(0.383)	NULL
TRPC3	7222	genome.wustl.edu	37	4	122835939	122835939	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130698.1	-1	validated	p.S446I	1.000	37	0%	23	65.2%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123147897	123147897	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000424425	+1	known	p.F775V	1.000	249	0%	143	44.1%	4	100%	-	-	-	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123167848	123167848	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015312.3	+1	reviewed	p.C1732Y	1.000	170	0%	58	43.1%	4	25%	probably_damaging(0.991)	deleterious(0.05)	deleterious(0.789)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123265633	123265633	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015312.3	+1	reviewed	p.R4217H	1.000	219	0%	85	49.4%	17	52.9%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123271021	123271021	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000306802	+1	known	p.S923L	1.000	401	0%	107	43.9%	26	50%	-	-	-	HMMPfam_FSA_C
KIAA1109	84162	genome.wustl.edu	37	4	123283285	123283285	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015312.3	+1	reviewed	p.W4967*	1.000	192	0%	80	16.3%	17	29.4%	-	-	-	HMMPfam_FSA_C
ADAD1	132612	genome.wustl.edu	37	4	123336566	123336566	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139243.3	+1	validated	p.E428K	1.000	226	0%	91	46.2%	0	-	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	HMMPfam_A_deamin,HMMSmart_SM00552
SPATA5	166378	genome.wustl.edu	37	4	123855812	123855812	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145207.2	+1	validated	p.G356*	1.000	123	0%	34	23.5%	1	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
SPATA5	166378	genome.wustl.edu	37	4	123949467	123949467	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145207.2	+1	validated	p.L666F	1.000	197	0%	79	41.8%	1	100%	probably_damaging(0.999)	tolerated(0.21)	deleterious(0.534)	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
ANKRD50	57182	genome.wustl.edu	37	4	125590319	125590319	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020337.2	-1	validated	p.S1371R	1.000	405	0%	120	14.2%	6	16.6%	possibly_damaging(0.468)	tolerated(0.22)	neutral(0.196)	NULL
ANKRD50	57182	genome.wustl.edu	37	4	125593462	125593462	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020337.2	-1	validated	p.R324C	1.000	188	0%	59	64.4%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAT4	79633	genome.wustl.edu	37	4	126237906	126237906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.A114T	1.000	15	0%	23	21.7%	1	100%	benign(0.005)	tolerated(0.25)	neutral(0.037)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126239613	126239613	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.N683D	0.999	114	0%	98	38.8%	3	33.3%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126239929	126239929	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.D788A	1.000	128	0%	85	27.1%	3	0%	probably_damaging(1)	tolerated(0.67)	deleterious(0.502)	HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126242301	126242301	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.R1579C	1.000	54	0%	49	57.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126369759	126369759	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.G2530R	0.853	150	0%	51	39.2%	0	-	possibly_damaging(0.862)	tolerated(0.76)	neutral(0.334)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126369969	126369969	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.S2600P	1.000	172	0%	39	43.6%	0	-	probably_damaging(0.988)	tolerated(0.23)	deleterious(0.479)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126372675	126372675	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.D3502N	1.000	112	0%	50	36%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126411473	126411473	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.S4499F	1.000	34	0%	33	42.4%	4	0%	possibly_damaging(0.697)	deleterious(0)	deleterious(0.695)	NULL
FAT4	79633	genome.wustl.edu	37	4	126412356	126412356	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024582.4	+1	validated	p.E4793D	1.000	36	0%	35	34.3%	9	55.5%	probably_damaging(0.987)	tolerated(0.07)	deleterious(0.756)	NULL
INTU	27152	genome.wustl.edu	37	4	128627785	128627785	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015693.3	+1	validated	p.E644	0.226	157	0%	66	43.9%	11	63.6%	-	-	-	NULL
INTU	27152	genome.wustl.edu	37	4	128627962	128627962	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015693.3	+1	validated	p.K703N	0.938	164	0%	80	12.5%	8	0%	possibly_damaging(0.655)	deleterious(0.02)	deleterious(0.614)	NULL
C4orf29	80167	genome.wustl.edu	37	4	128905523	128905523	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039717.1	+1	predicted	p.N41I	1.000	387	0%	147	49%	2	50%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_DUF2048
C4orf29	80167	genome.wustl.edu	37	4	128905532	128905532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039717.1	+1	predicted	p.R44K	1.000	389	0%	152	40.1%	2	50%	benign(0)	tolerated(1)	-	HMMPfam_DUF2048
LARP1B	55132	genome.wustl.edu	37	4	129012544	129012544	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018078.2	+1	reviewed	p.R182M	0.999	417	0.2%	189	34.4%	14	50%	benign(0.159)	tolerated(0.08)	neutral(0.314)	NULL
LARP1B	55132	genome.wustl.edu	37	4	129035799	129035799	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018078.2	+1	reviewed	p.A355S	0.992	209	0%	89	36%	3	0%	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
PHF17	79960	genome.wustl.edu	37	4	129770294	129770294	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199320.2	+1	validated	p.E152	0.993	113	0.9%	74	50%	14	21.4%	-	-	-	HMMPfam_EPL1
PHF17	79960	genome.wustl.edu	37	4	129773277	129773277	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199320.2	+1	validated	p.D184N	1.000	108	0%	59	49.2%	7	42.8%	possibly_damaging(0.858)	deleterious(0.01)	deleterious(0.737)	NULL
PHF17	79960	genome.wustl.edu	37	4	129789079	129789079	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199320.2	+1	validated	p.E524D	1.000	205	0%	83	45.8%	6	33.3%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
PCDH10	57575	genome.wustl.edu	37	4	134073469	134073469	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032961.1	+1	reviewed	p.V725A	1.000	35	0%	34	38.2%	1	0%	possibly_damaging(0.927)	deleterious(0.02)	deleterious(0.758)	NULL
PCDH10	57575	genome.wustl.edu	37	4	134073782	134073782	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032961.1	+1	reviewed	p.S829	1.000	54	0%	72	41.7%	4	50%	-	-	-	NULL
PCDH18	54510	genome.wustl.edu	37	4	138442481	138442481	+	Missense_Mutation	SNP	C	C	T	rs111581489		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019035.3	-1	reviewed	p.R1037H	0.981	16	0%	16	50%	11	36.3%	probably_damaging(0.996)	tolerated(0.16)	deleterious(0.521)	NULL
PCDH18	54510	genome.wustl.edu	37	4	138451584	138451584	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019035.3	-1	reviewed	p.P553	0.001	127	0%	58	46.6%	11	54.5%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDH18	54510	genome.wustl.edu	37	4	138452456	138452456	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019035.3	-1	reviewed	p.T263A	1.000	95	0%	18	50%	0	-	possibly_damaging(0.888)	deleterious(0.02)	deleterious(0.730)	HMMPfam_Cadherin,superfamily_Cadherin-like
SLC7A11	23657	genome.wustl.edu	37	4	139140465	139140465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014331.3	-1	validated	p.R234Q	1.000	240	0%	98	52%	3	0%	benign(0.288)	tolerated(0.63)	neutral(0.092)	HMMPfam_AA_permease
CCRN4L	25819	genome.wustl.edu	37	4	139966215	139966215	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012118.2	+1	reviewed	p.R295W	0.995	40	0%	29	55.2%	18	38.8%	benign(0.066)	deleterious(0.02)	neutral(0.388)	HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos
ELF2	1998	genome.wustl.edu	37	4	139980672	139980672	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201999.1	-1	validated	p.G404A	1.000	105	0%	53	45.3%	19	42.1%	probably_damaging(0.989)	tolerated(0.21)	deleterious(0.483)	NULL
NAA15	80155	genome.wustl.edu	37	4	140306024	140306024	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_057175.3	+1	validated	p.T732S	1.000	218	0%	65	49.2%	14	42.8%	benign(0.138)	tolerated(0.63)	neutral(0.015)	NULL
RAB33B	83452	genome.wustl.edu	37	4	140393923	140393923	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031296.1	+1	provisional	p.V111	1.000	91	0%	39	43.6%	9	44.4%	-	-	-	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
ELMOD2	255520	genome.wustl.edu	37	4	141446706	141446706	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153702.2	+1	validated	p.Q42*	0.994	359	0%	207	40.6%	4	0%	-	-	-	NULL
ZNF330	27309	genome.wustl.edu	37	4	142155041	142155041	+	Silent	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014487.4	+1	validated	p.G287	0.120	231	0%	87	46%	33	45.4%	-	-	-	HMMPfam_NOA36
INPP4B	8821	genome.wustl.edu	37	4	143003276	143003276	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101669.1	-1	reviewed	p.S850	0.473	153	0%	58	51.7%	1	0%	-	-	-	NULL
INPP4B	8821	genome.wustl.edu	37	4	143326389	143326389	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000507462	-1	known	p.D9N	0.995	81	0%	28	28.6%	0	-	-	-	-	NULL
USP38	84640	genome.wustl.edu	37	4	144135087	144135087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032557.5	+1	validated	p.P653L	0.124	173	0%	51	31.4%	15	33.3%	benign(0.005)	tolerated(0.1)	neutral(0.286)	HMMPfam_UCH,superfamily_Cysteine proteinases
SMARCA5	8467	genome.wustl.edu	37	4	144469179	144469179	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003601.2	+1	reviewed	p.C957	1.000	241	0%	55	47.3%	59	45.7%	-	-	-	HMMSmart_SANT,superfamily_Homeodomain_like,HMMPfam_SLIDE
FREM3	166752	genome.wustl.edu	37	4	144507036	144507036	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000329798	-1	known	p.A2047T	0.108	129	0%	94	51.1%	1	100%	benign(0)	tolerated(0.7)	neutral(0.002)	HMMPfam_Calx-beta,HMMSmart_SM00237
FREM3	166752	genome.wustl.edu	37	4	144620549	144620549	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000329798	-1	known	p.S427F	0.934	31	0%	43	48.8%	0	-	possibly_damaging(0.893)	deleterious(0)	deleterious(0.796)	NULL
GYPE	2996	genome.wustl.edu	37	4	144797924	144797924	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002102.3	-1	reviewed	p.S74Y	0.000	375	0%	131	48.1%	0	-	benign(0.041)	tolerated(0.12)	neutral(0.263)	NULL
HHIP	64399	genome.wustl.edu	37	4	145567966	145567966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022475.1	+1	reviewed	p.R47C	1.000	48	0%	46	43.5%	3	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Folate_rec
ANAPC10	10393	genome.wustl.edu	37	4	145916538	145916538	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014885.3	-1	validated	p.R182H	1.000	288	0%	96	47.9%	13	30.7%	possibly_damaging(0.72)	deleterious(0.03)	deleterious(0.625)	HMMPfam_APC10
ANAPC10	10393	genome.wustl.edu	37	4	145916699	145916699	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014885.3	-1	validated	p.H128	0.997	245	0.4%	101	45.5%	27	33.3%	-	-	-	HMMPfam_APC10,superfamily_Gal_bind_like
OTUD4	54726	genome.wustl.edu	37	4	146085374	146085374	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102653.1	-1	reviewed	p.D51Y	1.000	129	0%	49	34.7%	1	100%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_OTU,superfamily_SSF54001
OTUD4	54726	genome.wustl.edu	37	4	146095877	146095877	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000394097	-1	known	p.R60H	0.997	253	0%	153	40.5%	5	60%	possibly_damaging(0.723)	tolerated(0.77)	neutral(0.264)	HMMPfam_OTU,superfamily_Cysteine proteinases
SMAD1	4086	genome.wustl.edu	37	4	146461008	146461008	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003688.1	+1	reviewed	p.S151	1.000	139	0%	65	44.6%	25	52%	-	-	-	NULL
SLC10A7	84068	genome.wustl.edu	37	4	147227103	147227103	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029998.3	-1	validated	p.V177D	1.000	205	0%	59	13.6%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SBF
POU4F2	5458	genome.wustl.edu	37	4	147560580	147560580	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004575.2	+1	validated	p.P96	1.000	13	0%	14	35.7%	0	-	-	-	-	NULL
POU4F2	5458	genome.wustl.edu	37	4	147561190	147561190	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004575.2	+1	validated	p.A154T	1.000	56	0%	66	39.4%	0	-	benign(0)	tolerated(0.34)	neutral(0.023)	NULL
TTC29	83894	genome.wustl.edu	37	4	147795982	147795982	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031956.2	-1	validated	p.A229T	1.000	270	0%	86	44.2%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	superfamily_TPR-like
TTC29	83894	genome.wustl.edu	37	4	147830230	147830230	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031956.2	-1	validated	p.K116	1.000	61	0%	22	36.4%	0	-	-	-	-	superfamily_TPR-like
PRMT10	90826	genome.wustl.edu	37	4	148594185	148594185	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138364.2	-1	provisional	p.N223T	1.000	207	0%	75	18.7%	6	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
ARHGAP10	79658	genome.wustl.edu	37	4	148984319	148984319	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024605.3	+1	validated	p.S683F	0.009	121	0%	75	42.7%	2	50%	benign(0.28)	tolerated(0.23)	neutral(0.128)	NULL
NR3C2	4306	genome.wustl.edu	37	4	149073676	149073676	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000901.4	-1	reviewed	p.S818	0.997	220	0%	112	43.8%	2	50%	-	-	-	HMMPfam_Hormone_recep,HMMSmart_HOLI,superfamily_Str_ncl_receptor
LRBA	987	genome.wustl.edu	37	4	151203671	151203671	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000509835	-1	known	p.T1402M	0.003	210	0%	125	44.8%	32	78.1%	-	-	-	superfamily_WD40 repeat-like
LRBA	987	genome.wustl.edu	37	4	151271207	151271207	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006726.2	-1	validated	p.F2444L	1.000	221	0%	110	40.9%	13	92.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Beach,superfamily_BEACH domain,superfamily_WD40 repeat-like
MAB21L2	10586	genome.wustl.edu	37	4	151504637	151504637	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006439.4	+1	reviewed	p.I152	1.000	16	0%	20	35%	0	-	-	-	-	HMMPfam_Mab-21
LRBA	987	genome.wustl.edu	37	4	151738356	151738356	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006726.2	-1	validated	p.T1742R	0.011	365	0%	105	45.7%	17	64.7%	benign(0.024)	deleterious(0.03)	neutral(0.365)	superfamily_ARM repeat
LRBA	987	genome.wustl.edu	37	4	151773771	151773771	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006726.2	-1	validated	p.E1031*	0.543	506	0%	225	38.2%	5	40%	-	-	-	superfamily_ARM repeat
LRBA	987	genome.wustl.edu	37	4	151829818	151829818	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006726.2	-1	validated	p.M451I	1.000	144	0%	52	44.2%	5	100%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	superfamily_ARM repeat
FAM160A1	729830	genome.wustl.edu	37	4	152567787	152567787	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109977.1	+1	predicted	p.A435V	1.000	129	0%	76	40.8%	8	50%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	NULL
PET112	5188	genome.wustl.edu	37	4	152629191	152629191	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004564.2	-1	validated	p.R276*	0.998	68	0%	47	40.4%	11	9%	-	-	-	HMMPfam_GatB_N
FBXW7	55294	genome.wustl.edu	37	4	153332802	153332802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033632.2	-1	reviewed	p.H52Y	1.000	371	0%	161	24.8%	15	6.6%	unknown(0)	deleterious(0)	-	NULL
TIGD4	201798	genome.wustl.edu	37	4	153690843	153690843	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145720.2	-1	reviewed	p.S438	0.000	168	0%	107	51.4%	1	100%	-	-	-	NULL
ARFIP1	27236	genome.wustl.edu	37	4	153750843	153750843	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025595.1	+1	validated	p.E20*	1.000	343	0%	112	37.5%	12	33.3%	-	-	-	NULL
TLR2	7097	genome.wustl.edu	37	4	154624732	154624732	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003264.3	+1	reviewed	p.E225K	0.021	267	0%	121	42.1%	3	66.6%	benign(0)	tolerated(0.88)	-	superfamily_SSF52058
SFRP2	6423	genome.wustl.edu	37	4	154702869	154702869	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003013.2	-1	reviewed	p.R208*	0.995	294	0%	201	42.3%	13	30.7%	-	-	-	superfamily_TIMP-like,HMMPfam_NTR,HMMSmart_SM00643
SFRP2	6423	genome.wustl.edu	37	4	154709592	154709592	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003013.2	-1	reviewed	p.F132	1.000	18	0%	25	44%	27	3.7%	-	-	-	superfamily_Frizzled cysteine-rich domain,HMMPfam_Fz,HMMSmart_SM00063
DCHS2	54798	genome.wustl.edu	37	4	155219579	155219579	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017639.3	-1	validated	p.G1508C	1.000	112	0%	42	45.2%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DCHS2	54798	genome.wustl.edu	37	4	155253804	155253804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017639.3	-1	validated	p.D687Y	1.000	127	0%	92	40.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PLRG1	5356	genome.wustl.edu	37	4	155461763	155461763	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002669.2	-1	provisional	p.R308*	0.998	151	0%	61	44.3%	56	3.5%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40
PLRG1	5356	genome.wustl.edu	37	4	155463404	155463404	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002669.2	-1	provisional	p.R208*	1.000	221	0%	102	41.2%	24	16.6%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
FGA	2243	genome.wustl.edu	37	4	155507374	155507374	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000508.3	-1	reviewed	p.A403T	0.000	69	0%	38	47.4%	0	-	benign(0)	tolerated(0.18)	neutral(0.056)	HMMPfam_Fib_alpha
FGA	2243	genome.wustl.edu	37	4	155507535	155507535	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000508.3	-1	reviewed	p.P349L	0.015	118	0%	51	19.6%	0	-	benign(0.059)	deleterious(0.01)	neutral(0.410)	HMMPfam_Fib_alpha
RBM46	166863	genome.wustl.edu	37	4	155719125	155719125	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144979.3	+1	validated	p.F105C	1.000	546	0%	354	62.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
RBM46	166863	genome.wustl.edu	37	4	155719365	155719365	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144979.3	+1	validated	p.G185A	1.000	40	0%	57	57.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
RBM46	166863	genome.wustl.edu	37	4	155720713	155720713	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144979.3	+1	validated	p.L467V	1.000	41	0%	22	22.7%	0	-	benign(0.236)	deleterious(0)	neutral(0.468)	NULL
RBM46	166863	genome.wustl.edu	37	4	155749035	155749035	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144979.3	+1	validated	p.R473H	1.000	194	0.5%	95	23.2%	0	-	possibly_damaging(0.903)	tolerated(0.11)	deleterious(0.629)	NULL
MAP9	79884	genome.wustl.edu	37	4	156273836	156273836	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039580.1	-1	validated	p.K578T	1.000	841	0%	262	51.1%	2	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
GUCY1B3	2983	genome.wustl.edu	37	4	156696163	156696163	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000857.2	+1	validated	p.I41L	1.000	332	0%	124	46.8%	3	33.3%	benign(0.219)	tolerated(0.23)	neutral(0.063)	HMMPfam_HNOB,superfamily_H-NOX domain
GUCY1B3	2983	genome.wustl.edu	37	4	156698691	156698691	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000857.2	+1	validated	p.E65A	1.000	422	0%	206	35%	13	46.1%	benign(0.001)	tolerated(0.72)	neutral(0.002)	HMMPfam_HNOB,superfamily_H-NOX domain
ASIC5	51802	genome.wustl.edu	37	4	156784766	156784766	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017419.2	-1	reviewed	p.R61C	0.865	157	0%	47	51.1%	0	-	probably_damaging(1)	tolerated(0.18)	deleterious(0.556)	HMMPfam_ASC
TDO2	6999	genome.wustl.edu	37	4	156826283	156826283	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005651.2	+1	validated	p.E69G	1.000	315	0%	108	40.7%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Trp_dioxygenase
FAM198B	51313	genome.wustl.edu	37	4	159048640	159048640	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031700.2	-1	validated	p.I501	0.800	427	0%	132	46.2%	9	22.2%	-	-	-	NULL
FAM198B	51313	genome.wustl.edu	37	4	159091428	159091428	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031700.2	-1	validated	p.P328S	0.030	148	0.7%	84	42.9%	1	0%	benign(0.024)	tolerated(0.38)	neutral(0.019)	NULL
FNIP2	57600	genome.wustl.edu	37	4	159782802	159782802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020840.1	+1	validated	p.A447T	1.000	176	0%	127	15%	5	40%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
FNIP2	57600	genome.wustl.edu	37	4	159817010	159817010	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020840.1	+1	validated	p.V1087I	0.985	190	0%	82	43.9%	4	50%	probably_damaging(1)	tolerated(0.18)	deleterious(0.556)	NULL
RAPGEF2	9693	genome.wustl.edu	37	4	160253704	160253704	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014247.2	+1	validated	p.P503T	1.000	191	0%	97	43.3%	4	50%	probably_damaging(0.973)	deleterious(0.03)	deleterious(0.779)	superfamily_Ras_GEF
NAF1	92345	genome.wustl.edu	37	4	164048188	164048188	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128931.1	-1	validated	p.F371	0.247	101	0%	53	49.1%	6	16.6%	-	-	-	NULL
NPY5R	4889	genome.wustl.edu	37	4	164272391	164272391	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006174.2	+1	provisional	p.Q322H	0.099	288	0%	161	39.8%	0	-	benign(0.001)	tolerated(0.16)	neutral(0.059)	HMMPfam_7tm_1,superfamily_SSF81321
TKTL2	84076	genome.wustl.edu	37	4	164393202	164393202	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032136.4	-1	validated	p.T562I	0.998	87	1.1%	57	57.9%	0	-	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMPfam_Transketolase_C,superfamily_Transketo_C_like
TKTL2	84076	genome.wustl.edu	37	4	164394410	164394410	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032136.4	-1	validated	p.S159	0.152	54	0%	31	35.5%	0	-	-	-	-	HMMPfam_Transketolase_N,superfamily_SSF52518
TKTL2	84076	genome.wustl.edu	37	4	164394544	164394544	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032136.4	-1	validated	p.R115*	0.001	65	0%	41	46.3%	0	-	-	-	-	HMMPfam_Transketolase_N,superfamily_SSF52518
ANP32C	23520	genome.wustl.edu	37	4	165118572	165118572	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012403.1	-1	reviewed	p.D98Y	1.000	405	0.2%	189	86.2%	0	-	-	-	-	HMMPfam_LRR_1,superfamily_L domain-like
KLHL2	11275	genome.wustl.edu	37	4	166184481	166184481	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007246.3	+1	validated	p.D172N	0.998	194	0%	93	11.8%	6	0%	possibly_damaging(0.439)	deleterious(0)	deleterious(0.588)	HMMPfam_BACK
KLHL2	11275	genome.wustl.edu	37	4	166226845	166226845	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007246.3	+1	validated	p.V336A	0.999	100	0%	47	34%	7	14.2%	benign(0.017)	tolerated(0.14)	neutral(0.250)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
TLL1	7092	genome.wustl.edu	37	4	166978453	166978453	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012464.3	+1	reviewed	p.S613N	1.000	60	0%	27	37%	0	-	possibly_damaging(0.493)	tolerated(0.23)	neutral(0.206)	superfamily_Spermadhesin CUB domain,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin
TLL1	7092	genome.wustl.edu	37	4	166981212	166981212	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012464.3	+1	reviewed	p.G627S	1.000	177	0%	68	26.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
ANXA10	11199	genome.wustl.edu	37	4	169098922	169098922	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007193.3	+1	reviewed	p.A171V	0.847	145	0%	86	44.2%	0	-	benign(0.167)	tolerated(0.16)	neutral(0.074)	superfamily_Annexin
DDX60	55601	genome.wustl.edu	37	4	169172229	169172229	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017631.5	-1	validated	p.K1245T	0.000	701	0%	269	42.4%	3	0%	possibly_damaging(0.484)	tolerated(0.12)	neutral(0.421)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX60	55601	genome.wustl.edu	37	4	169183243	169183243	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017631.5	-1	validated	p.K1061E	1.000	404	0%	135	40%	4	0%	benign(0.218)	tolerated(0.32)	neutral(0.045)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX60	55601	genome.wustl.edu	37	4	169201624	169201624	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017631.5	-1	validated	p.E614*	0.903	495	0%	193	42.5%	1	0%	-	-	-	NULL
DDX60L	91351	genome.wustl.edu	37	4	169321991	169321991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012967.1	-1	validated	p.K1159N	0.001	393	0%	177	45.2%	2	50%	benign(0.156)	tolerated(0.08)	neutral(0.314)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX60L	91351	genome.wustl.edu	37	4	169336568	169336568	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012967.1	-1	validated	p.T990	0.181	231	0.4%	62	50%	3	66.6%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
SH3RF1	57630	genome.wustl.edu	37	4	170076716	170076716	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020870.3	-1	reviewed	p.L227R	1.000	256	0%	72	37.5%	10	20%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
NEK1	4750	genome.wustl.edu	37	4	170347326	170347326	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012224.1	-1	validated	p.T954N	0.001	253	0%	91	47.3%	4	50%	benign(0)	tolerated(0.86)	neutral(0.001)	NULL
CLCN3	1182	genome.wustl.edu	37	4	170628311	170628311	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173872.2	+1	validated	p.E681D	1.000	109	0%	63	36.5%	17	35.2%	benign(0.001)	tolerated(0.13)	neutral(0.253)	HMMPfam_CBS,HMMSmart_CBS
C4orf27	54969	genome.wustl.edu	37	4	170663164	170663164	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017867.2	-1	validated	p.E198*	0.957	820	0%	418	46.7%	13	0%	-	-	-	HMMPfam_DUF2228
MFAP3L	9848	genome.wustl.edu	37	4	170913395	170913395	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021647.6	-1	validated	p.K122E	0.997	23	0%	19	36.8%	18	55.5%	benign(0.098)	deleterious(0.02)	neutral(0.391)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HPGD	3248	genome.wustl.edu	37	4	175416700	175416700	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000860.4	-1	reviewed	p.A166V	1.000	76	0%	27	33.3%	189	5.2%	possibly_damaging(0.947)	deleterious(0.01)	deleterious(0.796)	HMMPfam_adh_short,PatternScan_ADH_SHORT,superfamily_NAD(P)-bd
ADAM29	11086	genome.wustl.edu	37	4	175898602	175898602	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130703.1	+1	reviewed	p.C642	0.998	41	0%	24	33.3%	0	-	-	-	-	NULL
GPM6A	2823	genome.wustl.edu	37	4	176561928	176561928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000510747	-1	known	p.S74F	1.000	443	0%	144	39.6%	0	-	-	-	-	NULL
GPM6A	2823	genome.wustl.edu	37	4	176594954	176594954	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005277.3	-1	validated	p.I88	0.461	106	0%	42	61.9%	0	-	-	-	-	HMMPfam_Myelin_PLP
GPM6A	2823	genome.wustl.edu	37	4	176622827	176622827	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005277.3	-1	validated	p.F43L	1.000	70	0%	29	51.7%	0	-	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	HMMPfam_Myelin_PLP,PatternScan_MYELIN_PLP_1
WDR17	116966	genome.wustl.edu	37	4	177046389	177046389	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170710.4	+1	reviewed	p.R249C	1.000	395	0%	182	47.3%	0	-	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMSmart_WD40,superfamily_Amine_DH_B_like
SPATA4	132851	genome.wustl.edu	37	4	177109387	177109387	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144644.2	-1	provisional	e5-1	0.978	167	0%	67	41.8%	0	-	-	-	-	-
SPATA4	132851	genome.wustl.edu	37	4	177113986	177113986	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144644.2	-1	provisional	p.I160	0.998	162	0%	75	46.7%	0	-	-	-	-	HMMPfam_DUF1042
ODZ3	55714	genome.wustl.edu	37	4	183652104	183652104	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080477.1	+1	provisional	p.H927N	1.000	286	0%	135	54.1%	0	-	benign(0.149)	deleterious(0.01)	neutral(0.419)	superfamily_CarboxypepD_reg,superfamily_ConA_like_lec_gl
ODZ3	55714	genome.wustl.edu	37	4	183664528	183664528	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080477.1	+1	provisional	p.R1195	0.990	62	0%	32	46.9%	0	-	-	-	-	superfamily_ConA_like_lec_gl,superfamily_SSF101898
ODZ3	55714	genome.wustl.edu	37	4	183694705	183694705	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080477.1	+1	provisional	p.A1658D	1.000	161	0%	95	40%	0	-	possibly_damaging(0.507)	tolerated(0.12)	neutral(0.430)	superfamily_ConA_like_lec_gl
DCTD	1635	genome.wustl.edu	37	4	183814198	183814198	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012732.1	-1	reviewed	p.A159	0.017	57	0%	33	45.5%	45	57.7%	-	-	-	superfamily_Cytidine_deaminase-like
DCTD	1635	genome.wustl.edu	37	4	183836205	183836205	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012732.1	-1	reviewed	p.A50T	1.000	74	0%	88	44.3%	37	35.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_dCMP_cyt_deam_1,superfamily_Cytidine_deaminase-like
CLDN22	53842	genome.wustl.edu	37	4	184241148	184241148	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111319.1	-1	provisional	p.A75V	0.000	132	0%	91	36.3%	2	50%	benign(0.017)	tolerated(0.31)	neutral(0.028)	HMMPfam_PMP22_Claudin
CDKN2AIP	55602	genome.wustl.edu	37	4	184366773	184366773	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017632.2	+1	provisional	p.E120K	1.000	162	0%	94	39.4%	16	62.5%	probably_damaging(0.955)	deleterious(0.01)	deleterious(0.804)	NULL
ING2	3622	genome.wustl.edu	37	4	184432022	184432022	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001564.2	+1	validated	p.Y254H	1.000	235	0%	98	42.9%	22	63.6%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	HMMSmart_PHD,superfamily_FYVE_PHD_ZnF,PatternScan_ZF_PHD_1,HMMPfam_PHD
STOX2	56977	genome.wustl.edu	37	4	184931214	184931214	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020225.1	+1	provisional	p.R408M	1.000	64	0%	49	38.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
IRF2	3660	genome.wustl.edu	37	4	185339801	185339801	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002199.3	-1	reviewed	p.C83	1.000	282	0%	139	43.9%	10	50%	-	-	-	"HMMPfam_IRF,HMMSmart_SM00348,superfamily_""Winged helix"" DNA-binding domain"
ACSL1	2180	genome.wustl.edu	37	4	185683628	185683628	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001995.2	-1	reviewed	p.A524V	0.951	186	0%	107	42.1%	16	37.5%	benign(0)	tolerated(0.13)	neutral(0.253)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSL1	2180	genome.wustl.edu	37	4	185709801	185709801	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001995.2	-1	reviewed	p.E94K	0.986	87	0%	38	47.4%	12	50%	possibly_damaging(0.455)	deleterious(0.01)	deleterious(0.554)	superfamily_Acetyl-CoA synthetase-like
KIAA1430	57587	genome.wustl.edu	37	4	186111550	186111550	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020827.1	-1	validated	p.Q267	1.000	477	0%	272	47.8%	15	46.6%	-	-	-	NULL
LRP2BP	55805	genome.wustl.edu	37	4	186288341	186288341	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018409.3	-1	validated	p.R346I	0.938	225	0%	116	49.1%	0	-	benign(0.01)	deleterious(0.02)	neutral(0.384)	NULL
LRP2BP	55805	genome.wustl.edu	37	4	186299233	186299233	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018409.3	-1	validated	e1+2	0.934	444	0%	204	42.6%	3	0%	-	-	-	-
ANKRD37	353322	genome.wustl.edu	37	4	186320148	186320148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000335174	+1	known	p.L80I	1.000	228	0%	146	37%	98	34.6%	benign(0.186)	tolerated(0.53)	neutral(0.025)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
UFSP2	55325	genome.wustl.edu	37	4	186336936	186336936	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018359.3	-1	validated	p.G140E	0.577	187	0%	85	40%	13	30.7%	benign(0)	tolerated(1)	-	NULL
C4orf47	441054	genome.wustl.edu	37	4	186353157	186353157	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114357.1	+1	predicted	p.S41I	1.000	277	0%	134	50%	0	-	benign(0.347)	tolerated(0.39)	neutral(0.126)	NULL
SORBS2	8470	genome.wustl.edu	37	4	186532987	186532987	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021069.4	-1	reviewed	p.P1011S	1.000	411	0%	194	11.3%	26	19.2%	probably_damaging(1)	tolerated(0.33)	deleterious(0.524)	superfamily_SH3-domain
SORBS2	8470	genome.wustl.edu	37	4	186560170	186560170	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000445625	-1	known	p.R133*	1.000	31	0%	12	33.3%	0	-	possibly_damaging(0.493)	tolerated(0.08)	neutral(0.465)	NULL
SORBS2	8470	genome.wustl.edu	37	4	186583271	186583271	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021069.4	-1	reviewed	p.H27	0.999	68	0%	45	42.2%	13	15.3%	-	-	-	NULL
FAM149A	25854	genome.wustl.edu	37	4	187084064	187084064	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006655.2	+1	validated	p.P265	0.063	65	0%	45	11.1%	28	0%	-	-	-	NULL
F11	2160	genome.wustl.edu	37	4	187195329	187195329	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000128.3	+1	reviewed	p.V129I	0.000	145	0%	72	45.8%	0	-	benign(0)	tolerated(0.67)	neutral(0.003)	HMMSmart_SM00223,PatternScan_APPLE,HMMPfam_PAN_1
F11	2160	genome.wustl.edu	37	4	187201488	187201488	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000128.3	+1	reviewed	p.R326H	1.000	102	0%	89	18%	0	-	probably_damaging(1)	tolerated(0.25)	deleterious(0.537)	HMMSmart_SM00223,PatternScan_APPLE,HMMPfam_PAN_1
FAT1	2195	genome.wustl.edu	37	4	187532695	187532695	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005245.3	-1	reviewed	p.R3233P	1.000	56	0%	35	48.6%	28	42.8%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187535426	187535426	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005245.3	-1	reviewed	p.A3050T	1.000	329	0%	141	45.4%	28	42.8%	probably_damaging(0.999)	tolerated(0.3)	deleterious(0.519)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187539690	187539690	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005245.3	-1	reviewed	p.E2684*	0.911	124	0%	67	49.3%	18	55.5%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187542455	187542455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005245.3	-1	reviewed	p.A1762V	0.000	121	0%	82	35.4%	11	27.2%	benign(0.003)	tolerated(1)	-	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187542861	187542861	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005245.3	-1	reviewed	p.R1627*	1.000	30	0%	18	50%	10	30%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187630437	187630437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005245.3	-1	reviewed	p.G182E	1.000	263	0%	138	52.9%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
ZFP42	132625	genome.wustl.edu	37	4	188924089	188924089	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174900.3	+1	validated	p.V43A	0.000	71	0%	38	36.8%	0	-	benign(0.013)	tolerated(0.81)	neutral(0.001)	NULL
TRIML1	339976	genome.wustl.edu	37	4	189060800	189060800	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178556.3	+1	provisional	p.E30K	0.494	65	0%	43	55.8%	0	-	possibly_damaging(0.697)	tolerated(0.05)	deleterious(0.595)	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
TRIML1	339976	genome.wustl.edu	37	4	189065193	189065193	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178556.3	+1	provisional	p.S254	0.023	30	0%	46	60.9%	0	-	-	-	-	NULL
PLEKHG4B	153478	genome.wustl.edu	37	5	182166	182166	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052909.3	+1	validated	p.A1182T	0.173	27	3.7%	13	61.5%	12	50%	benign(0.001)	deleterious(0.05)	neutral(0.345)	NULL
SDHA	6389	genome.wustl.edu	37	5	251560	251560	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004168.2	+1	reviewed	p.A591T	0.980	25	0%	14	35.7%	194	46.3%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Succ_DH_flav_C,superfamily_Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
AHRR	57491	genome.wustl.edu	37	5	422929	422929	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020731.3	+1	reviewed	p.D180G	1.000	25	0%	28	28.6%	0	-	possibly_damaging(0.833)	deleterious(0.04)	deleterious(0.666)	HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain)
EXOC3	11336	genome.wustl.edu	37	5	462158	462158	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007277.4	+1	reviewed	p.A492V	0.999	47	0%	37	48.6%	22	72.7%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Sec6
SLC9A3	6550	genome.wustl.edu	37	5	484762	484762	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004174.2	-1	validated	p.A269T	1.000	5	0.000	12	0.417	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Na_H_Exchanger
CEP72	55722	genome.wustl.edu	37	5	635629	635629	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018140.3	+1	reviewed	p.P278	0.000	30	0%	31	35.5%	14	42.8%	-	-	-	NULL
ZDHHC11B	653082	genome.wustl.edu	37	5	766896	766896	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_926053.4	-1	model	p.A47T	0.000	15	0%	28	50%	1	100%	benign(0.003)	tolerated(0.35)	neutral(0.021)	NULL
ZDHHC11	79844	genome.wustl.edu	37	5	840739	840739	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024786.2	-1	validated	p.L219M	0.976	17	0%	16	43.8%	9	66.6%	benign(0.144)	deleterious(0.05)	neutral(0.358)	NULL
BRD9	65980	genome.wustl.edu	37	5	876233	876233	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023924.4	-1	validated	p.L360I	0.911	29	0%	30	13.3%	18	5.5%	benign(0)	tolerated(1)	-	NULL
BRD9	65980	genome.wustl.edu	37	5	889242	889242	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023924.4	-1	validated	p.D51G	1.000	286	0%	135	12.6%	12	16.6%	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain
BRD9	65980	genome.wustl.edu	37	5	891311	891311	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000467963	-1	known	p.P120L	0.981	20	0%	39	41%	13	46.1%	benign(0.338)	tolerated(0.36)	neutral(0.127)	superfamily_Bromodomain
TRIP13	9319	genome.wustl.edu	37	5	908507	908507	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004237.3	+1	reviewed	p.A266V	1.000	38	2.6%	26	46.2%	35	42.8%	possibly_damaging(0.804)	deleterious(0.01)	deleterious(0.708)	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
SLC12A7	10723	genome.wustl.edu	37	5	1083902	1083902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006598.2	-1	validated	p.E363K	0.964	12	0%	14	28.6%	36	47.2%	benign(0.005)	tolerated(1)	-	HMMPfam_AA_permease
CLPTM1L	81037	genome.wustl.edu	37	5	1338036	1338036	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030782.3	-1	provisional	p.R221C	0.994	47	0%	40	47.5%	73	38.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CLPTM1
LPCAT1	79888	genome.wustl.edu	37	5	1479738	1479738	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024830.3	-1	validated	p.E272K	1.000	90	0%	67	14.9%	69	14.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF69593
LPCAT1	79888	genome.wustl.edu	37	5	1494910	1494910	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024830.3	-1	validated	p.A133V	0.998	12	0%	15	46.7%	60	48.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Acyltransferase,HMMSmart_PlsC,superfamily_SSF69593
C5orf38	153571	genome.wustl.edu	37	5	2755148	2755148	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178569.2	+1	provisional	p.R137I	0.005	157	0.6%	97	42.3%	0	-	unknown(0)	-	-	NULL
IRX1	79192	genome.wustl.edu	37	5	3600724	3600724	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024337.3	+1	validated	p.E438D	1.000	25	0%	17	47.1%	0	-	benign(0.004)	tolerated(1)	-	NULL
ADAMTS16	170690	genome.wustl.edu	37	5	5239870	5239870	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139056.2	+1	reviewed	p.Y785*	1.000	141	0%	92	46.7%	0	-	-	-	-	HMMPfam_ADAM_spacer1
ADAMTS16	170690	genome.wustl.edu	37	5	5242273	5242273	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139056.2	+1	reviewed	p.V877	0.649	35	0%	17	35.3%	0	-	-	-	-	HMMSmart_SM00209
ADAMTS16	170690	genome.wustl.edu	37	5	5303758	5303758	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139056.2	+1	reviewed	p.A1022V	0.582	10	0.000	5	0.800	0	-	benign(0.001)	tolerated(0.29)	neutral(0.029)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ADAMTS16	170690	genome.wustl.edu	37	5	5306709	5306709	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139056.2	+1	reviewed	p.K1093N	1.000	76	0%	37	48.6%	0	-	possibly_damaging(0.938)	tolerated(0.19)	neutral(0.433)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
KIAA0947	23379	genome.wustl.edu	37	5	5461851	5461851	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015325.1	+1	validated	p.E802K	0.000	249	0.4%	126	46%	1	0%	possibly_damaging(0.722)	tolerated(0.27)	neutral(0.295)	NULL
KIAA0947	23379	genome.wustl.edu	37	5	5462485	5462485	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015325.1	+1	validated	p.G1013E	0.000	50	0%	40	35%	6	50%	benign(0.195)	tolerated(0.11)	neutral(0.290)	NULL
KIAA0947	23379	genome.wustl.edu	37	5	5463449	5463449	+	Silent	SNP	C	C	T	rs141988637	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015325.1	+1	validated	p.S1334	0.000	46	0%	28	46.4%	12	25%	-	-	-	NULL
KIAA0947	23379	genome.wustl.edu	37	5	5464089	5464089	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015325.1	+1	validated	p.P1548T	0.996	97	0%	45	24.4%	11	54.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KIAA0947	23379	genome.wustl.edu	37	5	5464992	5464992	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015325.1	+1	validated	p.R1849C	0.731	92	0%	73	56.2%	13	84.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PAPD7	11044	genome.wustl.edu	37	5	6746337	6746337	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006999.4	+1	reviewed	p.R169I	0.984	111	0%	72	44.4%	4	25%	probably_damaging(0.994)	tolerated(0.05)	deleterious(0.797)	superfamily_PAP/OAS1 substrate-binding domain
PAPD7	11044	genome.wustl.edu	37	5	6746462	6746462	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006999.4	+1	reviewed	p.A211T	1.000	117	0%	64	51.6%	14	42.8%	benign(0.017)	tolerated(0.08)	neutral(0.300)	HMMPfam_PAP_assoc,superfamily_PAP/OAS1 substrate-binding domain
C5orf49	134121	genome.wustl.edu	37	5	7835500	7835500	+	Nonsense_Mutation	SNP	C	C	A	rs16879215	byCluster;byFrequency;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001089584.1	-1	predicted	p.E87*	0.946	357	0%	114	43.9%	2	0%	-	-	-	NULL
SEMA5A	9037	genome.wustl.edu	37	5	9052018	9052018	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003966.2	-1	reviewed	p.R938W	1.000	46	0%	26	46.2%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1
SEMA5A	9037	genome.wustl.edu	37	5	9066626	9066626	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003966.2	-1	reviewed	p.R736C	1.000	43	0%	37	56.8%	2	50%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
SEMA5A	9037	genome.wustl.edu	37	5	9224815	9224815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003966.2	-1	reviewed	p.T206M	1.000	102	0%	66	37.9%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
FAM173B	134145	genome.wustl.edu	37	5	10236719	10236719	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199133.2	-1	validated	p.A105	0.665	117	0%	86	46.5%	8	37.5%	-	-	-	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
CCT5	22948	genome.wustl.edu	37	5	10254264	10254264	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012073.3	+1	reviewed	p.I38T	1.000	216	0%	93	44.1%	169	48.5%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_GroEL equatorial domain-like
CCT5	22948	genome.wustl.edu	37	5	10262702	10262702	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012073.3	+1	reviewed	p.A430V	1.000	93	0%	57	54.4%	309	44.3%	possibly_damaging(0.714)	deleterious(0.02)	deleterious(0.641)	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like
CMBL	134147	genome.wustl.edu	37	5	10286524	10286524	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138809.3	-1	validated	p.T136	0.000	67	0%	59	45.8%	31	45.1%	-	-	-	HMMPfam_DLH,superfamily_SSF53474
MARCH6	10299	genome.wustl.edu	37	5	10381993	10381993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005885.2	+1	provisional	p.R91Q	1.000	388	0%	215	42.3%	15	33.3%	probably_damaging(0.997)	tolerated(0.1)	deleterious(0.752)	NULL
MARCH6	10299	genome.wustl.edu	37	5	10405770	10405770	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005885.2	+1	provisional	p.R478Q	1.000	598	0%	219	43.4%	27	37%	probably_damaging(0.996)	tolerated(0.06)	deleterious(0.784)	NULL
ROPN1L	83853	genome.wustl.edu	37	5	10461310	10461310	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031916.3	+1	reviewed	p.A144	0.242	27	0%	14	64.3%	3	66.6%	-	-	-	NULL
DAP	1611	genome.wustl.edu	37	5	10748343	10748343	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004394.2	-1	reviewed	p.H32	0.002	246	0%	184	43.5%	71	33.8%	-	-	-	NULL
DNAH5	1767	genome.wustl.edu	37	5	13716766	13716766	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001369.2	-1	reviewed	p.G4247R	1.000	155	0%	64	45.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Dynein_heavy
DNAH5	1767	genome.wustl.edu	37	5	13776708	13776708	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001369.2	-1	reviewed	p.H3071	0.995	134	0%	62	56.5%	0	-	-	-	-	superfamily_SSF52540
DNAH5	1767	genome.wustl.edu	37	5	13793781	13793781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001369.2	-1	reviewed	p.E2689D	1.000	98	0%	53	52.8%	0	-	benign(0.005)	tolerated(0.47)	neutral(0.011)	HMMSmart_AAA,HMMPfam_AAA_5,superfamily_SSF52540
DNAH5	1767	genome.wustl.edu	37	5	13914740	13914740	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001369.2	-1	reviewed	p.Q403H	1.000	265	0%	87	44.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DHC_N1
DNAH5	1767	genome.wustl.edu	37	5	13931319	13931319	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001369.2	-1	reviewed	p.A31V	1.000	121	0%	56	10.7%	0	-	benign(0.245)	tolerated(0.09)	neutral(0.322)	NULL
LOC100289578	100289578	genome.wustl.edu	37	5	14297204	14297204	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342489.1	-1	model	p.A89T	1.000	59	0%	40	47.5%	7	57.1%	-	-	-	NULL
TRIO	7204	genome.wustl.edu	37	5	14399085	14399085	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007118.2	+1	validated	p.R1507Q	1.000	362	0%	195	21%	11	27.2%	unknown(0)	deleterious(0)	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
FAM105A	54491	genome.wustl.edu	37	5	14602327	14602327	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019018.2	+1	validated	p.K128N	0.998	361	0%	191	41.9%	7	14.2%	probably_damaging(0.999)	tolerated(0.23)	deleterious(0.532)	NULL
FAM105A	54491	genome.wustl.edu	37	5	14607542	14607542	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019018.2	+1	validated	p.K201T	1.000	391	0%	239	41.4%	5	40%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	NULL
FAM105A	54491	genome.wustl.edu	37	5	14610394	14610394	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019018.2	+1	validated	p.D348N	1.000	29	0%	23	39.1%	8	62.5%	possibly_damaging(0.638)	deleterious(0.04)	deleterious(0.573)	NULL
ANKH	56172	genome.wustl.edu	37	5	14751264	14751264	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_054027.4	-1	reviewed	p.A201T	1.000	40	0%	20	30%	50	50%	probably_damaging(0.99)	tolerated(0.1)	deleterious(0.728)	HMMPfam_ANKH
FBXL7	23194	genome.wustl.edu	37	5	15928167	15928167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012304.3	+1	reviewed	p.P99L	1.000	10	0%	13	53.8%	0	-	possibly_damaging(0.85)	deleterious(0.01)	deleterious(0.733)	NULL
FBXL7	23194	genome.wustl.edu	37	5	15937133	15937133	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012304.3	+1	reviewed	p.C438	1.000	16	0%	24	41.7%	2	0%	-	-	-	HMMSmart_SM00367,superfamily_RNI-like
MARCH11	441061	genome.wustl.edu	37	5	16177951	16177951	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102562.1	-1	provisional	p.R193W	1.000	141	0%	82	43.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00744,HMMPfam_zf-C3HC4
FAM134B	54463	genome.wustl.edu	37	5	16565901	16565901	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034850.1	-1	reviewed	p.G143	1.000	77	0%	45	17.8%	7	0%	-	-	-	NULL
FAM134B	54463	genome.wustl.edu	37	5	16572122	16572122	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034850.1	-1	reviewed	p.V137D	1.000	240	0%	74	43.2%	5	60%	possibly_damaging(0.887)	deleterious(0)	deleterious(0.791)	NULL
MYO10	4651	genome.wustl.edu	37	5	16694659	16694659	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012334.2	-1	validated	p.F1207	1.000	35	0%	38	42.1%	37	37.8%	-	-	-	superfamily_SSF50729
MYO10	4651	genome.wustl.edu	37	5	16701647	16701647	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012334.2	-1	validated	p.C953R	1.000	23	0%	16	31.2%	65	44.6%	probably_damaging(0.984)	deleterious(0.02)	deleterious(0.814)	NULL
MYO10	4651	genome.wustl.edu	37	5	16711312	16711312	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012334.2	-1	validated	p.R658W	0.998	40	0%	25	48%	62	41.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
CDH18	1016	genome.wustl.edu	37	5	19544035	19544035	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004934.3	-1	reviewed	p.V445I	0.788	322	0%	105	38.1%	0	-	benign(0)	tolerated(0.2)	neutral(0.049)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDH18	1016	genome.wustl.edu	37	5	19571921	19571921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004934.3	-1	reviewed	p.K340N	1.000	145	0%	65	43.1%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDH12	1010	genome.wustl.edu	37	5	21752007	21752007	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004061.3	-1	reviewed	p.E742K	1.000	363	0.3%	152	48%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_Cadherin_C
PRDM9	56979	genome.wustl.edu	37	5	23521286	23521286	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020227.2	+1	provisional	p.L169P	0.220	281	0%	95	38.9%	0	-	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	NULL
PRDM9	56979	genome.wustl.edu	37	5	23523424	23523424	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020227.2	+1	provisional	p.E303*	1.000	414	0%	151	41.1%	0	-	-	-	-	HMMSmart_SET,superfamily_SSF82199
PRDM9	56979	genome.wustl.edu	37	5	23526828	23526828	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020227.2	+1	provisional	p.R544M	1.000	124	0%	64	18.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_ZnF_C2H2,superfamily_SSF57667
PRDM9	56979	genome.wustl.edu	37	5	23527516	23527516	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020227.2	+1	provisional	p.E773D	1.000	80	0%	42	33.3%	0	-	benign(0.091)	deleterious(0.01)	neutral(0.412)	superfamily_SSF57667
CDH10	1008	genome.wustl.edu	37	5	24488207	24488207	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006727.2	-1	reviewed	p.I644	1.000	49	0%	36	36.1%	0	-	-	-	-	HMMPfam_Cadherin_C
CDH10	1008	genome.wustl.edu	37	5	24509697	24509697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006727.2	-1	reviewed	p.D412Y	1.000	245	0%	130	37.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDH9	1007	genome.wustl.edu	37	5	26886184	26886184	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016279.3	-1	reviewed	p.Q507H	1.000	50	0%	16	56.2%	0	-	benign(0.037)	tolerated(0.08)	neutral(0.302)	HMMPfam_Cadherin,superfamily_Cadherin
PDZD2	23037	genome.wustl.edu	37	5	32071494	32071494	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178140.2	+1	reviewed	p.T846	0.956	159	0%	111	42.3%	3	100%	-	-	-	NULL
PDZD2	23037	genome.wustl.edu	37	5	32089096	32089096	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178140.2	+1	reviewed	p.P1848S	0.012	90	0%	65	36.9%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GOLPH3	64083	genome.wustl.edu	37	5	32126476	32126476	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022130.3	-1	reviewed	p.D247Y	1.000	112	0%	72	62.5%	130	45.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GPP34
MTMR12	54545	genome.wustl.edu	37	5	32230094	32230094	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040446.1	-1	reviewed	p.I678	0.002	38	0%	49	53.1%	31	38.7%	-	-	-	NULL
MTMR12	54545	genome.wustl.edu	37	5	32276821	32276821	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040446.1	-1	reviewed	p.T37A	0.988	472	0%	197	48.7%	24	54.1%	benign(0.002)	tolerated(0.3)	neutral(0.029)	NULL
ZFR	51663	genome.wustl.edu	37	5	32380223	32380223	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016107.3	-1	validated	p.C899	1.000	68	0%	44	15.9%	51	13.7%	-	-	-	HMMPfam_DZF,HMMSmart_DZF
ZFR	51663	genome.wustl.edu	37	5	32403401	32403401	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016107.3	-1	validated	p.P442	0.975	200	0%	99	36.4%	43	58.1%	-	-	-	NULL
ADAMTS12	81792	genome.wustl.edu	37	5	33881376	33881376	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030955.2	-1	reviewed	p.L113I	0.998	104	0%	43	55.8%	3	0%	probably_damaging(0.99)	tolerated(0.19)	deleterious(0.491)	HMMPfam_Pep_M12B_propep
SLC45A2	51151	genome.wustl.edu	37	5	33984543	33984543	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016180.3	-1	reviewed	p.Y49C	1.000	51	0%	40	40%	0	-	unknown(0)	deleterious(0)	-	superfamily_MFS general substrate transporter
RAI14	26064	genome.wustl.edu	37	5	34824554	34824554	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145525.1	+1	validated	p.Y872	0.000	35	0%	25	52%	14	64.2%	-	-	-	NULL
PRLR	5618	genome.wustl.edu	37	5	35066123	35066123	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000949.4	-1	validated	p.E313*	1.000	42	0%	23	30.4%	4	50%	-	-	-	NULL
PRLR	5618	genome.wustl.edu	37	5	35089666	35089666	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000949.4	-1	validated	p.T19	0.000	147	0%	71	45.1%	0	-	-	-	-	NULL
SPEF2	79925	genome.wustl.edu	37	5	35644508	35644508	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024867.3	+1	validated	p.T156A	1.000	157	0%	38	36.8%	3	33.3%	benign(0.054)	tolerated(0.76)	neutral(0.005)	NULL
SPEF2	79925	genome.wustl.edu	37	5	35691290	35691290	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024867.3	+1	validated	p.A559V	0.850	267	0%	97	41.2%	1	0%	probably_damaging(0.996)	tolerated(0.25)	deleterious(0.498)	NULL
SPEF2	79925	genome.wustl.edu	37	5	35700753	35700753	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024867.3	+1	validated	p.A766V	0.000	374	0%	114	46.5%	1	0%	unknown(0)	deleterious(0.02)	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
SPEF2	79925	genome.wustl.edu	37	5	35763732	35763732	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024867.3	+1	validated	p.E1243	0.002	215	0%	98	37.8%	0	-	-	-	-	NULL
SPEF2	79925	genome.wustl.edu	37	5	35814649	35814649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024867.3	+1	validated	p.K1821N	1.000	190	0%	58	56.9%	0	-	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	NULL
IL7R	3575	genome.wustl.edu	37	5	35873650	35873650	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002185.2	+1	reviewed	p.E202	0.998	166	0%	67	38.8%	2	0%	-	-	-	PatternScan_HEMATOPO_REC_S_F1,HMMPfam_fn3,superfamily_Fibronectin type III
UGT3A2	167127	genome.wustl.edu	37	5	36049366	36049366	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174914.3	-1	validated	p.E156D	1.000	112	0%	36	50%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_UDPGT,superfamily_SSF53756
UGT3A2	167127	genome.wustl.edu	37	5	36064411	36064411	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174914.3	-1	validated	p.L46I	0.998	348	0%	187	38%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_UDPGT,superfamily_SSF53756
LMBRD2	92255	genome.wustl.edu	37	5	36137483	36137483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007527.1	-1	validated	p.K143N	1.000	266	0%	113	44.2%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_LMBR1
NADKD1	133686	genome.wustl.edu	37	5	36195373	36195373	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085411.1	-1	validated	p.R401H	1.000	372	0%	130	40.8%	17	23.5%	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	NULL
NADKD1	133686	genome.wustl.edu	37	5	36200376	36200376	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085411.1	-1	validated	p.R340Q	0.976	483	0%	120	40%	12	41.6%	benign(0.002)	tolerated(0.51)	neutral(0.009)	NULL
RANBP3L	202151	genome.wustl.edu	37	5	36251470	36251470	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145000.3	-1	validated	p.C433	0.048	230	0%	106	52.8%	0	-	-	-	-	NULL
SLC1A3	6507	genome.wustl.edu	37	5	36671138	36671138	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004172.4	+1	reviewed	p.A109	0.997	47	0%	29	37.9%	5	60%	-	-	-	HMMPfam_SDF
NIPBL	25836	genome.wustl.edu	37	5	36985304	36985304	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133433.3	+1	reviewed	p.N674	0.988	104	0%	36	52.8%	5	40%	-	-	-	superfamily_ARM repeat
NIPBL	25836	genome.wustl.edu	37	5	37059185	37059185	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133433.3	+1	reviewed	p.E2535K	1.000	442	0%	156	39.1%	14	42.8%	possibly_damaging(0.724)	tolerated(0.17)	neutral(0.322)	NULL
NIPBL	25836	genome.wustl.edu	37	5	37064977	37064977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133433.3	+1	reviewed	p.D2800N	1.000	45	0%	32	40.6%	36	55.5%	possibly_damaging(0.949)	deleterious(0)	deleterious(0.838)	NULL
C5orf42	65250	genome.wustl.edu	37	5	37148344	37148344	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023073.3	-1	predicted	p.F1644	0.248	633	0.2%	237	45.1%	2	50%	-	-	-	NULL
C5orf42	65250	genome.wustl.edu	37	5	37164388	37164388	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023073.3	-1	predicted	p.F1405	0.018	267	0%	142	52.1%	2	0%	-	-	-	NULL
C5orf42	65250	genome.wustl.edu	37	5	37196095	37196095	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023073.3	-1	predicted	p.R107*	1.000	160	0.6%	96	39.6%	2	100%	-	-	-	NULL
WDR70	55100	genome.wustl.edu	37	5	37516670	37516670	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018034.2	+1	provisional	p.F299L	1.000	344	0%	143	41.3%	15	53.3%	probably_damaging(0.987)	deleterious(0.02)	deleterious(0.820)	HMMSmart_WD40,superfamily_WD40_like
EGFLAM	133584	genome.wustl.edu	37	5	38438405	38438405	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152403.2	+1	validated	p.V771A	0.881	111	0.9%	42	47.6%	3	0%	benign(0.039)	tolerated(0.11)	neutral(0.274)	superfamily_ConA_like_lec_gl
LIFR	3977	genome.wustl.edu	37	5	38511912	38511912	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127671.1	-1	reviewed	p.S239I	1.000	119	0%	44	36.4%	1	0%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
OSMR	9180	genome.wustl.edu	37	5	38883961	38883961	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003999.2	+1	reviewed	p.V151I	0.000	106	0%	33	39.4%	6	50%	benign(0.026)	tolerated(0.44)	neutral(0.014)	NULL
OSMR	9180	genome.wustl.edu	37	5	38885506	38885506	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003999.2	+1	reviewed	p.L253	0.980	154	0%	71	38%	1	100%	-	-	-	superfamily_Fibronectin type III
OSMR	9180	genome.wustl.edu	37	5	38885550	38885550	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003999.2	+1	reviewed	p.S268F	0.000	150	0%	74	44.6%	3	66.6%	benign(0.023)	tolerated(0.7)	neutral(0.003)	superfamily_Fibronectin type III
OSMR	9180	genome.wustl.edu	37	5	38931984	38931984	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003999.2	+1	reviewed	e15-1	0.653	427	0%	241	46.5%	0	-	-	-	-	-
RICTOR	253260	genome.wustl.edu	37	5	38942431	38942431	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152756.3	-1	validated	p.I1701T	0.033	207	0%	81	42%	6	33.3%	benign(0)	tolerated(0.35)	neutral(0.021)	NULL
RICTOR	253260	genome.wustl.edu	37	5	38945076	38945076	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152756.3	-1	validated	p.C1576	1.000	202	0%	77	31.2%	3	66.6%	-	-	-	superfamily_ARM repeat
FYB	2533	genome.wustl.edu	37	5	39126206	39126206	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001465.3	-1	validated	p.T647A	0.011	477	0%	134	43.3%	0	-	benign(0.004)	tolerated(0.41)	neutral(0.015)	NULL
C9	735	genome.wustl.edu	37	5	39341770	39341770	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001737.3	-1	reviewed	p.Q72H	0.998	115	0%	73	34.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1
PTGER4	5734	genome.wustl.edu	37	5	40692311	40692311	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000958.2	+1	reviewed	p.T433N	1.000	19	0%	15	46.7%	7	57.1%	possibly_damaging(0.796)	deleterious(0.03)	deleterious(0.663)	NULL
RPL37	6167	genome.wustl.edu	37	5	40832665	40832665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000997.4	-1	reviewed	p.R79C	1.000	200	0%	100	41%	3434	44.7%	benign(0.187)	tolerated(0.06)	neutral(0.340)	NULL
CARD6	84674	genome.wustl.edu	37	5	40853248	40853248	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032587.3	+1	reviewed	p.A605V	1.000	177	0%	119	53.8%	1	0%	benign(0.102)	deleterious(0.01)	neutral(0.414)	NULL
CARD6	84674	genome.wustl.edu	37	5	40853410	40853410	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444789	+1	known	p.K452*	0.998	38	0%	29	24.1%	3	0%	possibly_damaging(0.733)	deleterious(0)	deleterious(0.713)	NULL
C7	730	genome.wustl.edu	37	5	40937774	40937774	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000587.2	+1	reviewed	p.V183	1.000	518	0%	165	42.4%	0	-	-	-	-	NULL
C7	730	genome.wustl.edu	37	5	40945299	40945299	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000587.2	+1	reviewed	e7-1	1.000	110	0%	38	34.2%	0	-	-	-	-	-
C7	730	genome.wustl.edu	37	5	40945430	40945430	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000587.2	+1	reviewed	p.R233H	0.000	369	0.3%	99	52.5%	0	-	benign(0)	tolerated(0.39)	neutral(0.016)	HMMPfam_MACPF
C7	730	genome.wustl.edu	37	5	40962263	40962263	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000587.2	+1	reviewed	p.G580*	1.000	373	0%	131	43.5%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
C7	730	genome.wustl.edu	37	5	40976912	40976912	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000587.2	+1	reviewed	p.R712I	0.999	295	0%	103	35%	1	100%	possibly_damaging(0.616)	deleterious(0.01)	deleterious(0.620)	HMMSmart_FIMAC
HEATR7B2	133558	genome.wustl.edu	37	5	40998237	40998237	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173489.4	-1	validated	p.P1559S	0.999	151	0%	47	27.7%	0	-	benign(0.041)	tolerated(0.28)	neutral(0.034)	superfamily_ARM repeat
ZNF131	7690	genome.wustl.edu	37	5	43174930	43174930	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003432.1	+1	validated	p.S489G	0.998	45	0%	29	13.8%	29	3.4%	benign(0.001)	tolerated(0.36)	neutral(0.020)	NULL
NIM1	167359	genome.wustl.edu	37	5	43280378	43280378	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153361.2	+1	provisional	p.G286	0.012	29	0%	20	45%	5	40%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
NNT	23530	genome.wustl.edu	37	5	43609440	43609440	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012343.3	+1	reviewed	p.V48A	0.448	250	0%	106	43.4%	19	57.8%	benign(0)	tolerated(0.35)	neutral(0.021)	NULL
HCN1	348980	genome.wustl.edu	37	5	45262468	45262468	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021072.2	-1	validated	p.P743L	0.421	49	2%	43	34.9%	0	-	benign(0)	tolerated(0.2)	neutral(0.049)	NULL
HCN1	348980	genome.wustl.edu	37	5	45353235	45353235	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021072.2	-1	validated	p.N448	1.000	325	0%	82	50%	0	-	-	-	-	superfamily_cNMP_binding
EMB	133418	genome.wustl.edu	37	5	49699188	49699188	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198449.2	-1	reviewed	p.S234F	0.680	262	0%	50	40%	0	-	benign(0.071)	tolerated(0.63)	neutral(0.009)	HMMSmart_SM00409,superfamily_Immunoglobulin
ITGA1	3672	genome.wustl.edu	37	5	52194154	52194154	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181501.1	+1	reviewed	p.R417Q	0.001	258	0.4%	110	50%	13	0%	benign(0)	tolerated(0.41)	neutral(0.015)	superfamily_SSF69318
ITGA1	3672	genome.wustl.edu	37	5	52240781	52240781	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181501.1	+1	reviewed	p.F1098L	1.000	215	0%	108	36.1%	10	10%	possibly_damaging(0.625)	deleterious(0.01)	deleterious(0.624)	superfamily_SSF69179
ITGA2	3673	genome.wustl.edu	37	5	52360929	52360929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002203.3	+1	reviewed	p.R597H	0.973	201	0%	40	50%	1	100%	benign(0.094)	tolerated(0.11)	neutral(0.279)	HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
ITGA2	3673	genome.wustl.edu	37	5	52370896	52370896	+	Silent	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002203.3	+1	reviewed	p.T890	0.993	291	0%	48	39.6%	1	100%	-	-	-	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
ITGA2	3673	genome.wustl.edu	37	5	52376371	52376371	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002203.3	+1	reviewed	p.A987T	1.000	227	0%	63	34.9%	6	16.6%	possibly_damaging(0.905)	tolerated(0.11)	deleterious(0.631)	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
MOCS2	4338	genome.wustl.edu	37	5	52404427	52404427	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176806.2	-1	reviewed	p.R22H	0.974	302	0%	170	13.5%	24	16.6%	probably_damaging(0.995)	tolerated(0.13)	deleterious(0.710)	HMMPfam_ThiS,superfamily_Mo_synth/thiamin_syn_S_b-grasp
HSPB3	8988	genome.wustl.edu	37	5	53751980	53751980	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006308.1	+1	provisional	p.P121S	1.000	62	0%	23	30.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HSP20,superfamily_HSP20-like chaperones
ESM1	11082	genome.wustl.edu	37	5	54275257	54275257	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007036.4	-1	reviewed	p.D153V	0.997	159	0%	72	54.2%	16	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
GZMA	3001	genome.wustl.edu	37	5	54405888	54405888	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006144.3	+1	reviewed	p.R223*	0.009	208	0.5%	93	55.9%	13	0%	-	-	-	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
CDC20B	166979	genome.wustl.edu	37	5	54468474	54468474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152623.2	-1	validated	p.S23I	0.256	230	0%	151	44.4%	2	50%	possibly_damaging(0.651)	deleterious(0)	deleterious(0.673)	superfamily_WD40_like
DHX29	54505	genome.wustl.edu	37	5	54565317	54565317	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019030.2	-1	validated	p.L1073R	1.000	216	0%	82	19.5%	29	10.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HA2,superfamily_SSF52540
DHX29	54505	genome.wustl.edu	37	5	54579512	54579512	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019030.2	-1	validated	p.L495R	1.000	672	0%	309	36.9%	9	44.4%	possibly_damaging(0.94)	deleterious(0)	deleterious(0.830)	NULL
SKIV2L2	23517	genome.wustl.edu	37	5	54624594	54624594	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015360.4	+1	validated	p.V157A	1.000	398	0%	148	40.5%	26	57.6%	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
IL31RA	133396	genome.wustl.edu	37	5	55178895	55178895	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139017.4	+1	validated	p.F160V	0.354	273	0%	131	13%	0	-	benign(0.071)	tolerated(0.25)	neutral(0.042)	HMMSmart_FN3,superfamily_FN_III-like
IL31RA	133396	genome.wustl.edu	37	5	55185836	55185836	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139017.4	+1	validated	p.N215	0.000	106	0%	60	40%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
IL31RA	133396	genome.wustl.edu	37	5	55185891	55185891	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139017.4	+1	validated	p.R234*	0.510	158	0%	86	43%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
ANKRD55	79722	genome.wustl.edu	37	5	55407120	55407120	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024669.2	-1	validated	p.G485	1.000	146	0%	74	40.5%	0	-	-	-	-	NULL
MAP3K1	4214	genome.wustl.edu	37	5	56174829	56174829	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005921.1	+1	validated	p.V663A	1.000	244	0%	59	39%	19	52.6%	benign(0.122)	tolerated(0.19)	neutral(0.060)	NULL
MAP3K1	4214	genome.wustl.edu	37	5	56179374	56179374	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005921.1	+1	validated	p.G1229	1.000	267	0%	105	45.7%	10	50%	-	-	-	superfamily_Kinase_like
HTR1A	3350	genome.wustl.edu	37	5	63256615	63256615	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000524.2	-1	validated	p.A311V	0.031	10	0%	14	42.9%	0	-	benign(0)	tolerated(0.08)	neutral(0.300)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
HTR1A	3350	genome.wustl.edu	37	5	63257378	63257378	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000524.2	-1	validated	p.V57M	1.000	27	0%	27	51.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RNF180	285671	genome.wustl.edu	37	5	63496644	63496644	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113561.1	+1	validated	p.S4R	0.970	369	0%	142	38%	1	0%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
CWC27	10283	genome.wustl.edu	37	5	64077801	64077801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005869.2	+1	validated	p.G65C	1.000	275	0%	112	46.4%	23	39.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pro_isomerase,PatternScan_CSA_PPIASE_1,superfamily_Cyclophilin-like
ADAMTS6	11174	genome.wustl.edu	37	5	64447675	64447675	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_197941.2	-1	reviewed	p.C1114	1.000	55	0%	49	16.3%	0	-	-	-	-	HMMPfam_PLAC
ADAMTS6	11174	genome.wustl.edu	37	5	64466464	64466464	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_197941.2	-1	reviewed	p.T1075I	1.000	50	0%	32	18.8%	0	-	benign(0.055)	tolerated(0.54)	neutral(0.011)	NULL
ADAMTS6	11174	genome.wustl.edu	37	5	64595871	64595871	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000261306	-1	known	p.E435*	1.000	167	0%	66	37.9%	0	-	-	-	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAMTS6	11174	genome.wustl.edu	37	5	64769450	64769450	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_197941.2	-1	reviewed	p.A17	1.000	247	0%	110	38.2%	0	-	-	-	-	NULL
ADAMTS6	11174	genome.wustl.edu	37	5	64769481	64769481	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_197941.2	-1	reviewed	p.T7M	1.000	216	0%	100	44%	0	-	probably_damaging(0.989)	deleterious(0.02)	deleterious(0.823)	NULL
PPWD1	23398	genome.wustl.edu	37	5	64880902	64880902	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015342.2	+1	validated	p.T532A	1.000	372	0%	102	41.2%	22	50%	benign(0.007)	deleterious(0)	neutral(0.445)	HMMPfam_Pro_isomerase,superfamily_CSA_PPIase
TRIM23	373	genome.wustl.edu	37	5	64892345	64892345	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001656.3	-1	reviewed	p.E441D	1.000	427	0%	136	40.4%	3	0%	possibly_damaging(0.943)	deleterious(0)	deleterious(0.832)	HMMSmart_SM00175,HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
C5orf44	80006	genome.wustl.edu	37	5	64956654	64956654	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001093755.1	+1	validated	p.K276T	1.000	218	0%	70	52.9%	13	69.2%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_DUF974
C5orf44	80006	genome.wustl.edu	37	5	64960167	64960167	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001093755.1	+1	validated	p.L369I	1.000	153	0%	55	41.8%	21	28.5%	benign(0.007)	tolerated(0.55)	neutral(0.007)	NULL
SGTB	54557	genome.wustl.edu	37	5	64976372	64976372	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019072.2	-1	validated	p.G210	0.969	375	0%	159	38.4%	2	50%	-	-	-	NULL
ERBB2IP	55914	genome.wustl.edu	37	5	65340013	65340013	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018695.2	+1	reviewed	p.N493H	1.000	339	0%	112	37.5%	4	50%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	NULL
ERBB2IP	55914	genome.wustl.edu	37	5	65349921	65349921	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018695.2	+1	reviewed	p.Q925	0.540	70	0%	40	37.5%	10	60%	-	-	-	NULL
SREK1	140890	genome.wustl.edu	37	5	65466677	65466677	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077199.1	+1	validated	p.D462	0.998	268	0%	124	41.1%	17	52.9%	-	-	-	superfamily_SSF54928
PIK3R1	5295	genome.wustl.edu	37	5	67569268	67569268	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181523.1	+1	reviewed	p.P129S	1.000	144	0%	80	22.5%	11	0%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
PIK3R1	5295	genome.wustl.edu	37	5	67588951	67588951	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181523.1	+1	reviewed	p.R348*	1.000	207	0%	102	46.1%	63	34.9%	-	-	-	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
PIK3R1	5295	genome.wustl.edu	37	5	67589586	67589591	+	In_Frame_Del	DEL	ATGAAT	ATGAAT	-	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	ATGAAT	ATGAAT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181523.1	+1	reviewed	p.EY451in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
SLC30A5	64924	genome.wustl.edu	37	5	68412341	68412341	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022902.2	+1	provisional	p.S398L	0.999	243	0%	77	40.3%	23	47.8%	possibly_damaging(0.77)	deleterious(0)	deleterious(0.730)	NULL
CCNB1	891	genome.wustl.edu	37	5	68464052	68464052	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031966.2	+1	reviewed	p.P82H	0.993	198	0%	172	32%	82	52.4%	probably_damaging(0.972)	deleterious(0.05)	deleterious(0.759)	NULL
CCNB1	891	genome.wustl.edu	37	5	68470121	68470121	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031966.2	+1	reviewed	p.V197A	1.000	181	0%	95	43.2%	103	50.4%	possibly_damaging(0.934)	deleterious(0)	deleterious(0.825)	HMMPfam_Cyclin_N,superfamily_Cyclin_like
CDK7	1022	genome.wustl.edu	37	5	68568859	68568859	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001799.3	+1	validated	p.T285	0.994	137	0%	69	52.2%	58	44.8%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
CCDC125	202243	genome.wustl.edu	37	5	68595879	68595879	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176816.3	-1	validated	p.C259Y	0.000	208	0%	116	44.8%	3	33.3%	possibly_damaging(0.819)	tolerated(0.19)	neutral(0.359)	NULL
MARVELD2	153562	genome.wustl.edu	37	5	68715625	68715625	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001038603.2	+1	validated	p.G138E	0.300	54	0%	25	56%	4	25%	unknown(0)	deleterious(0)	-	NULL
OCLN	100506658	genome.wustl.edu	37	5	68805221	68805221	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002538.2	+1	reviewed	p.V102I	0.000	68	1.5%	56	42.9%	14	42.8%	benign(0)	tolerated(1)	-	HMMPfam_MARVEL
BDP1	55814	genome.wustl.edu	37	5	70800510	70800510	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018429.2	+1	reviewed	p.Q768H	0.003	237	0%	107	46.7%	2	50%	benign(0.269)	deleterious(0.05)	neutral(0.374)	NULL
BDP1	55814	genome.wustl.edu	37	5	70806132	70806132	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018429.2	+1	reviewed	p.S1071R	0.001	123	0.8%	65	43.1%	7	42.8%	benign(0.315)	tolerated(0.09)	neutral(0.395)	NULL
MCCC2	64087	genome.wustl.edu	37	5	70898444	70898444	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022132.4	+1	reviewed	p.L165	0.999	90	0%	52	40.4%	48	45.8%	-	-	-	HMMPfam_Carboxyl_trans,superfamily_ClpP/crotonase
MCCC2	64087	genome.wustl.edu	37	5	70952650	70952650	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022132.4	+1	reviewed	p.P552L	0.997	330	0%	181	10.5%	59	3.3%	possibly_damaging(0.671)	deleterious(0)	deleterious(0.682)	HMMPfam_Carboxyl_trans,superfamily_ClpP/crotonase
MAP1B	4131	genome.wustl.edu	37	5	71489993	71489993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005909.3	+1	validated	p.D271N	1.000	86	0%	50	58%	9	66.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MAP1B	4131	genome.wustl.edu	37	5	71492659	71492659	+	Silent	SNP	C	C	T	rs183960902	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005909.3	+1	validated	p.F1159	0.823	76	0%	50	40%	8	50%	-	-	-	NULL
RGNEF	64283	genome.wustl.edu	37	5	73076546	73076546	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080479.2	+1	reviewed	p.S296T	0.110	65	0%	38	21.1%	6	33.3%	benign(0.004)	deleterious(0)	neutral(0.445)	NULL
RGNEF	64283	genome.wustl.edu	37	5	73142209	73142209	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080479.2	+1	reviewed	p.D515G	0.988	298	0%	120	46.7%	2	50%	probably_damaging(0.963)	deleterious(0)	deleterious(0.850)	NULL
HEXB	3074	genome.wustl.edu	37	5	74009438	74009438	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000521.3	+1	reviewed	p.G293	0.963	406	0%	176	41.5%	96	42.7%	-	-	-	HMMPfam_Glyco_hydro_20,superfamily_(Trans)glycosidases
GFM2	84340	genome.wustl.edu	37	5	74021912	74021912	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032380.3	-1	reviewed	p.V589A	1.000	198	0%	80	55%	42	52.3%	benign(0.004)	tolerated(1)	-	superfamily_Ribosomal protein S5 domain 2-like
ANKRD31	256006	genome.wustl.edu	37	5	74400234	74400234	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000274361	-1	known	p.S1660Y	0.000	202	0%	81	43.2%	0	-	benign(0.086)	tolerated(0.56)	neutral(0.013)	NULL
ANKRD31	256006	genome.wustl.edu	37	5	74400590	74400590	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000274361	-1	known	p.E1541	0.000	205	0%	93	47.3%	0	-	-	-	-	NULL
ANKRD31	256006	genome.wustl.edu	37	5	74412447	74412447	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000274361	-1	known	p.T1310P	0.002	296	0%	64	48.4%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
ANKRD31	256006	genome.wustl.edu	37	5	74488558	74488558	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000274361	-1	known	p.M448V	0.000	803	0%	192	47.4%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
HMGCR	3156	genome.wustl.edu	37	5	74655336	74655336	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000859.2	+1	reviewed	p.T804	0.973	97	0%	58	37.9%	80	57.5%	-	-	-	HMMPfam_HMG-CoA_red,PatternScan_HMG_COA_REDUCTASE_2,superfamily_Substrate-binding domain of HMG-CoA reductase
HMGCR	3156	genome.wustl.edu	37	5	74655906	74655906	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000859.2	+1	reviewed	p.S852P	1.000	135	0%	81	43.2%	57	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_HMG-CoA_red,superfamily_Substrate-binding domain of HMG-CoA reductase
POLK	51426	genome.wustl.edu	37	5	74880672	74880672	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016218.2	+1	validated	p.L383F	1.000	514	0%	206	36.9%	7	71.4%	benign(0.164)	tolerated(0.13)	neutral(0.268)	HMMPfam_IMS,superfamily_DNA/RNA polymerases
SV2C	22987	genome.wustl.edu	37	5	75505704	75505704	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014979.1	+1	provisional	p.P302L	1.000	43	0%	19	42.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
F2RL2	2151	genome.wustl.edu	37	5	75913565	75913565	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004101.2	-1	reviewed	p.I323V	0.000	211	0%	126	39.7%	0	-	benign(0.004)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
F2RL2	2151	genome.wustl.edu	37	5	75919013	75919013	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004101.2	-1	reviewed	p.L15	0.052	140	0%	79	11.4%	0	-	-	-	-	NULL
S100Z	170591	genome.wustl.edu	37	5	76173610	76173610	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130772.3	+1	validated	p.A85T	1.000	257	0%	163	44.8%	0	-	benign(0.334)	deleterious(0.03)	deleterious(0.469)	superfamily_EF-hand
CRHBP	1393	genome.wustl.edu	37	5	76249029	76249029	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001882.3	+1	reviewed	p.R24W	0.996	52	0%	49	57.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_CRF-BP
AGGF1	55109	genome.wustl.edu	37	5	76335420	76335420	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018046.3	+1	validated	p.R249H	1.000	580	0%	315	41%	9	44.4%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
AGGF1	55109	genome.wustl.edu	37	5	76342417	76342417	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018046.3	+1	validated	p.E372	1.000	157	0%	109	57.8%	17	52.9%	-	-	-	NULL
PDE8B	8622	genome.wustl.edu	37	5	76715687	76715687	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003719.2	+1	validated	p.S742N	1.000	80	0%	36	52.8%	2	0%	possibly_damaging(0.786)	tolerated(0.05)	deleterious(0.640)	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
PDE8B	8622	genome.wustl.edu	37	5	76717755	76717755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003719.2	+1	validated	p.R787H	1.000	107	2.8%	75	49.3%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
ARSB	411	genome.wustl.edu	37	5	78251141	78251141	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000046.3	-1	reviewed	p.N292S	1.000	173	0%	81	39.5%	5	0%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
DMGDH	29958	genome.wustl.edu	37	5	78293955	78293955	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013391.2	-1	reviewed	p.E851K	0.999	718	0.1%	392	49.2%	0	-	benign(0.348)	deleterious(0.01)	deleterious(0.516)	superfamily_Aminomethyltransferase beta-barrel domain
JMY	133746	genome.wustl.edu	37	5	78612077	78612077	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152405.4	+1	validated	p.P972S	1.000	111	0%	44	18.2%	5	60%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
PAPD4	167153	genome.wustl.edu	37	5	78938657	78938657	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114393.1	+1	validated	p.C225	0.988	208	0%	50	26%	10	40%	-	-	-	superfamily_Nucleotidyltransferase
PAPD4	167153	genome.wustl.edu	37	5	78977872	78977872	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114393.1	+1	validated	p.D456E	1.000	247	0%	103	40.8%	10	30%	benign(0)	tolerated(1)	-	superfamily_PAP/OAS1 substrate-binding domain
CMYA5	202333	genome.wustl.edu	37	5	79025319	79025319	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153610.3	+1	validated	p.F244C	0.997	95	0%	36	33.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79029422	79029422	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153610.3	+1	validated	p.D1612Y	0.004	108	0%	43	41.9%	0	-	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79029941	79029941	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153610.3	+1	validated	p.D1785Y	0.000	110	0%	48	33.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79030972	79030972	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153610.3	+1	validated	p.I2128M	0.000	99	0%	28	17.9%	0	-	possibly_damaging(0.706)	deleterious(0.01)	deleterious(0.659)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79031902	79031902	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153610.3	+1	validated	p.S2438	0.002	130	0%	26	42.3%	0	-	-	-	-	NULL
CMYA5	202333	genome.wustl.edu	37	5	79033241	79033241	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153610.3	+1	validated	p.L2885M	0.000	74	0%	23	43.5%	0	-	benign(0.004)	tolerated(0.17)	neutral(0.059)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79086828	79086828	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153610.3	+1	validated	p.P3909S	1.000	147	0%	85	49.4%	0	-	probably_damaging(0.994)	tolerated(0.1)	deleterious(0.738)	NULL
THBS4	7060	genome.wustl.edu	37	5	79335932	79335932	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003248.4	+1	reviewed	p.L41	1.000	112	0%	71	12.7%	2	0%	-	-	-	HMMSmart_TSPN
THBS4	7060	genome.wustl.edu	37	5	79366526	79366526	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003248.4	+1	reviewed	p.D505N	1.000	50	0%	24	62.5%	2	50%	probably_damaging(0.984)	deleterious(0.04)	deleterious(0.779)	HMMPfam_TSP_3,superfamily_SSF103647
SPZ1	84654	genome.wustl.edu	37	5	79616257	79616257	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032567.3	+1	validated	p.E75*	0.358	162	0%	81	42%	0	-	-	-	-	NULL
SPZ1	84654	genome.wustl.edu	37	5	79616397	79616397	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032567.3	+1	validated	p.E121D	0.000	116	0%	72	38.9%	0	-	possibly_damaging(0.734)	tolerated(0.4)	neutral(0.285)	NULL
MSH3	4437	genome.wustl.edu	37	5	80171602	80171602	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002439.3	+1	reviewed	p.T1112M	0.000	229	0%	67	16.4%	13	0%	benign(0.008)	tolerated(0.19)	neutral(0.050)	NULL
RASGRF2	5924	genome.wustl.edu	37	5	80388707	80388707	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006909.1	+1	validated	p.R493I	1.000	220	0%	109	29.4%	1	0%	possibly_damaging(0.941)	deleterious(0)	deleterious(0.831)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
RASGRF2	5924	genome.wustl.edu	37	5	80497244	80497244	+	Silent	SNP	C	C	T	rs189681922	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006909.1	+1	validated	p.A963	0.959	112	0%	58	48.3%	1	0%	-	-	-	HMMSmart_SM00229,superfamily_Ras GEF
ACOT12	134526	genome.wustl.edu	37	5	80681611	80681611	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130767.2	-1	validated	p.A54	1.000	162	0%	58	48.3%	0	-	-	-	-	HMMPfam_4HBT,superfamily_Thioesterase/thiol ester dehydrase-isomerase
SSBP2	23635	genome.wustl.edu	37	5	80770324	80770324	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012446.2	-1	validated	p.R164*	0.998	569	0.2%	161	49.1%	12	8.3%	-	-	-	HMMPfam_SSDP
ATP6AP1L	92270	genome.wustl.edu	37	5	81614039	81614039	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017971.1	+1	provisional	p.E199K	0.990	55	1.8%	29	37.9%	4	25%	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
TMEM167A	153339	genome.wustl.edu	37	5	82360898	82360898	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174909.4	-1	validated	p.I14	1.000	170	0%	70	47.1%	64	35.9%	-	-	-	HMMPfam_DUF1242
XRCC4	7518	genome.wustl.edu	37	5	82406963	82406963	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022406.2	+1	reviewed	p.F86L	0.992	326	0%	139	43.9%	4	50%	possibly_damaging(0.945)	deleterious(0.01)	deleterious(0.795)	superfamily_XRCC4 N-terminal domain,HMMPfam_XRCC4
VCAN	1462	genome.wustl.edu	37	5	82786221	82786221	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004385.4	+1	reviewed	p.A125	0.068	72	0%	40	40%	23	34.7%	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
VCAN	1462	genome.wustl.edu	37	5	82815267	82815267	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004385.4	+1	reviewed	p.I381S	0.001	190	0%	93	36.6%	5	20%	benign(0.183)	deleterious(0)	neutral(0.462)	NULL
VCAN	1462	genome.wustl.edu	37	5	82849249	82849249	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004385.4	+1	reviewed	p.R3187Q	0.999	66	0%	24	41.7%	74	36.4%	probably_damaging(0.977)	deleterious(0.01)	deleterious(0.825)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
HAPLN1	1404	genome.wustl.edu	37	5	82940197	82940197	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001884.3	-1	validated	p.T254A	1.000	48	0%	25	52%	7	0%	possibly_damaging(0.842)	tolerated(0.2)	neutral(0.371)	HMMSmart_SM00445,superfamily_C-type lectin-like
HAPLN1	1404	genome.wustl.edu	37	5	82940284	82940284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001884.3	-1	validated	p.P225S	1.000	51	0%	27	44.4%	9	0%	possibly_damaging(0.512)	tolerated(0.17)	neutral(0.231)	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,superfamily_C-type lectin-like
HAPLN1	1404	genome.wustl.edu	37	5	82940362	82940362	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001884.3	-1	validated	p.R199W	0.853	23	0%	20	60%	3	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,superfamily_C-type lectin-like
EDIL3	10085	genome.wustl.edu	37	5	83362341	83362341	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005711.3	-1	reviewed	p.Y246H	1.000	445	0%	166	45.2%	2	0%	possibly_damaging(0.902)	deleterious(0)	deleterious(0.801)	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,superfamily_Galactose-binding domain-like
TMEM161B	153396	genome.wustl.edu	37	5	87502259	87502259	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153354.3	-1	provisional	p.S219F	1.000	87	0%	29	41.4%	7	28.5%	possibly_damaging(0.805)	deleterious(0.02)	deleterious(0.686)	HMMPfam_Tmemb_161AB
TMEM161B	153396	genome.wustl.edu	37	5	87502869	87502869	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153354.3	-1	provisional	p.Y192C	1.000	314	0%	141	36.9%	4	50%	probably_damaging(0.999)	tolerated(0.17)	deleterious(0.549)	HMMPfam_Tmemb_161AB
MEF2C	4208	genome.wustl.edu	37	5	88027590	88027590	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002397.3	-1	validated	p.R256*	1.000	325	0%	101	25.7%	4	0%	-	-	-	NULL
LYSMD3	116068	genome.wustl.edu	37	5	89814996	89814996	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198273.1	-1	validated	p.S187	0.989	545	0%	273	40.7%	13	38.4%	-	-	-	NULL
GPR98	84059	genome.wustl.edu	37	5	89948377	89948377	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032119.3	+1	reviewed	p.S1211P	1.000	179	0.6%	92	50%	1	100%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	NULL
GPR98	84059	genome.wustl.edu	37	5	89953750	89953750	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032119.3	+1	reviewed	p.G1469	0.011	232	0%	146	44.5%	2	50%	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
GPR98	84059	genome.wustl.edu	37	5	90072383	90072383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032119.3	+1	reviewed	p.A4173T	1.000	151	0%	55	36.4%	0	-	probably_damaging(1)	tolerated(0.23)	deleterious(0.541)	NULL
GPR98	84059	genome.wustl.edu	37	5	90083903	90083903	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032119.3	+1	reviewed	p.V4557I	0.000	134	0%	55	56.4%	0	-	benign(0.028)	tolerated(0.17)	neutral(0.060)	NULL
GPR98	84059	genome.wustl.edu	37	5	90449105	90449105	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032119.3	+1	reviewed	p.S6231I	1.000	103	0%	55	38.2%	4	50%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
ARRDC3	57561	genome.wustl.edu	37	5	90670775	90670775	+	Silent	SNP	G	G	A	rs187417675	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020801.2	-1	validated	p.L278	0.280	134	0%	73	47.9%	58	50%	-	-	-	HMMPfam_Arrestin_C,superfamily_Ig_E-set
KIAA0825	285600	genome.wustl.edu	37	5	93489740	93489740	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145678.1	-1	validated	p.S1267Y	1.000	917	0.1%	495	11.7%	0	-	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	NULL
KIAA0825	285600	genome.wustl.edu	37	5	93752871	93752871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000312498	-1	known	p.F518L	0.058	132	0%	46	45.7%	0	-	possibly_damaging(0.574)	deleterious(0)	deleterious(0.641)	NULL
LOC100131573	100131573	genome.wustl.edu	37	5	93928977	93928977	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001716404.1	+1	model	p.F186L	0.993	267	0%	77	46.8%	0	-	-	-	-	NULL
ANKRD32	84250	genome.wustl.edu	37	5	93979004	93979004	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032290.3	+1	validated	p.V153A	0.999	189	0%	55	27.3%	2	50%	possibly_damaging(0.94)	deleterious(0.02)	deleterious(0.768)	HMMSmart_BRCT
ANKRD32	84250	genome.wustl.edu	37	5	94024308	94024308	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032290.3	+1	validated	p.S740Y	1.000	242	0%	137	40.9%	3	33.3%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
MCTP1	79772	genome.wustl.edu	37	5	94204092	94204092	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024717.4	-1	validated	p.Y794	1.000	178	0%	35	31.4%	2	0%	-	-	-	NULL
TTC37	9652	genome.wustl.edu	37	5	94838600	94838600	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014639.2	-1	provisional	p.T1109P	1.000	500	0%	227	52.9%	16	37.5%	possibly_damaging(0.899)	deleterious(0.02)	deleterious(0.739)	superfamily_Prenyl_trans
TTC37	9652	genome.wustl.edu	37	5	94863845	94863845	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014639.2	-1	provisional	p.V336I	0.055	156	0%	56	44.6%	7	28.5%	benign(0)	tolerated(1)	-	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452
ELL2	22936	genome.wustl.edu	37	5	95226836	95226836	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012081.5	-1	validated	p.R578C	1.000	284	0%	160	51.9%	4	0%	unknown(0)	deleterious(0)	-	HMMPfam_Occludin_ELL
ELL2	22936	genome.wustl.edu	37	5	95278738	95278738	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012081.5	-1	validated	p.R55*	1.000	169	0%	41	43.9%	3	33.3%	-	-	-	HMMPfam_ELL
PCSK1	5122	genome.wustl.edu	37	5	95730655	95730655	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000439.4	-1	reviewed	p.E599	0.119	279	0.4%	115	41.7%	0	-	-	-	-	superfamily_Gal_bind_like
PCSK1	5122	genome.wustl.edu	37	5	95734656	95734656	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000439.4	-1	reviewed	p.E505	0.997	463	0%	200	38.5%	0	-	-	-	-	HMMPfam_P_proprotein,superfamily_Gal_bind_like
PCSK1	5122	genome.wustl.edu	37	5	95768707	95768707	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000439.4	-1	reviewed	p.V14I	0.993	31	0%	39	43.6%	0	-	benign(0)	tolerated(0.53)	neutral(0.007)	NULL
CAST	831	genome.wustl.edu	37	5	96065399	96065399	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000512620	+1	known	p.S134N	0.775	118	0%	52	63.5%	37	37.8%	-	-	-	HMMPfam_Calpain_inhib
CAST	831	genome.wustl.edu	37	5	96079388	96079388	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173061.2	+1	reviewed	p.D20N	0.000	72	0%	45	48.9%	0	-	possibly_damaging(0.946)	deleterious(0.02)	deleterious(0.773)	NULL
ERAP1	51752	genome.wustl.edu	37	5	96098915	96098915	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016442.3	-1	validated	p.A946T	0.000	107	0%	44	45.5%	1	0%	benign(0.111)	-	-	NULL
LNPEP	4012	genome.wustl.edu	37	5	96315026	96315026	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005575.2	+1	reviewed	p.E68D	1.000	107	0%	39	51.3%	5	60%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
LIX1	167410	genome.wustl.edu	37	5	96430658	96430658	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153234.4	-1	validated	p.R215W	0.989	75	0%	45	44.4%	0	-	possibly_damaging(0.438)	deleterious(0.01)	deleterious(0.548)	NULL
LIX1	167410	genome.wustl.edu	37	5	96478219	96478219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153234.4	-1	validated	p.P21L	0.997	159	0%	66	31.8%	0	-	probably_damaging(0.96)	deleterious(0.01)	deleterious(0.808)	NULL
RIOK2	55781	genome.wustl.edu	37	5	96500718	96500718	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000511012	-1	known	p.Y129	0.004	192	0%	80	42.5%	0	-	unknown(0)	-	-	NULL
RIOK2	55781	genome.wustl.edu	37	5	96503207	96503207	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000511293	-1	known	p.C25*	1.000	127	0%	54	55.6%	24	37.5%	benign(0.001)	tolerated(0.91)	-	NULL
RGMB	285704	genome.wustl.edu	37	5	98115324	98115324	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012761.2	+1	validated	p.C100	0.945	43	0%	14	35.7%	14	14.2%	-	-	-	HMMPfam_RGM_N
RGMB	285704	genome.wustl.edu	37	5	98128881	98128881	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012761.2	+1	validated	p.G287	1.000	39	0%	37	37.8%	19	63.1%	-	-	-	HMMPfam_RGM_C
RGMB	285704	genome.wustl.edu	37	5	98129337	98129337	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012761.2	+1	validated	p.L439	1.000	260	0%	167	21%	42	23.8%	-	-	-	HMMPfam_RGM_C
ST8SIA4	7903	genome.wustl.edu	37	5	100147553	100147553	+	Nonstop_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005668.4	-1	reviewed	p.*360Q	1.000	570	0%	267	43.4%	1	0%	-	-	-	NULL
SLCO4C1	353189	genome.wustl.edu	37	5	101627259	101627259	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_180991.4	-1	validated	p.R136H	1.000	103	0%	62	46.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
PAM	5066	genome.wustl.edu	37	5	102203053	102203053	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000919.3	+1	reviewed	p.D56Y	1.000	317	0%	182	37.9%	57	40.3%	unknown(0)	deleterious(0)	-	HMMPfam_Cu2_monooxygen,superfamily_PHM_PNGase_F
PAM	5066	genome.wustl.edu	37	5	102345530	102345530	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000919.3	+1	reviewed	p.S764F	0.992	254	0%	72	29.2%	122	45.9%	possibly_damaging(0.63)	deleterious(0.01)	deleterious(0.626)	superfamily_SSF101898
GIN1	54826	genome.wustl.edu	37	5	102432434	102432434	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017676.2	-1	validated	p.E369K	1.000	461	0%	168	38.7%	2	0%	probably_damaging(0.99)	tolerated(0.29)	deleterious(0.471)	NULL
GIN1	54826	genome.wustl.edu	37	5	102440298	102440298	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017676.2	-1	validated	p.Y196H	1.000	230	0%	76	44.7%	1	100%	possibly_damaging(0.64)	deleterious(0)	deleterious(0.668)	HMMPfam_rve,superfamily_Ribonuclease H-like
GIN1	54826	genome.wustl.edu	37	5	102444330	102444330	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017676.2	-1	validated	p.T28A	1.000	456	0.2%	176	40.9%	4	50%	unknown(0)	deleterious(0)	-	NULL
PPIP5K2	23262	genome.wustl.edu	37	5	102487021	102487021	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015216.2	+1	provisional	p.G324D	1.000	340	0%	133	37.6%	16	43.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF56059
EFNA5	1946	genome.wustl.edu	37	5	106716956	106716956	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001962.2	-1	reviewed	p.*229	1.000	100	0%	48	52.1%	39	51.2%	-	-	-	NULL
EFNA5	1946	genome.wustl.edu	37	5	107006205	107006205	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001962.2	-1	reviewed	p.N37S	1.000	16	0%	34	47.1%	14	64.2%	possibly_damaging(0.51)	deleterious(0.04)	deleterious(0.520)	HMMPfam_Ephrin,superfamily_Cupredoxin
FBXL17	64839	genome.wustl.edu	37	5	107559870	107559870	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000496714	-1	known	p.G124	1.000	180	0%	57	26.3%	9	44.4%	-	-	-	superfamily_SSF52047
FER	2241	genome.wustl.edu	37	5	108168528	108168528	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005246.2	+1	reviewed	p.A89T	1.000	199	0%	90	43.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FCH,HMMSmart_SM00055
FER	2241	genome.wustl.edu	37	5	108171463	108171463	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005246.2	+1	reviewed	p.E146*	1.000	246	0%	65	44.6%	1	0%	-	-	-	NULL
FER	2241	genome.wustl.edu	37	5	108382829	108382829	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005246.2	+1	reviewed	p.P618	0.989	274	0%	100	43%	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
FER	2241	genome.wustl.edu	37	5	108521923	108521923	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005246.2	+1	reviewed	p.D742	0.980	238	0%	155	46.5%	7	14.2%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
PJA2	9867	genome.wustl.edu	37	5	108698637	108698637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014819.4	-1	validated	p.P519H	0.901	279	0%	170	41.8%	40	42.5%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
PJA2	9867	genome.wustl.edu	37	5	108714806	108714806	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014819.4	-1	validated	p.G128S	0.998	129	0%	55	32.7%	40	27.5%	possibly_damaging(0.586)	tolerated(0.56)	neutral(0.209)	NULL
MAN2A1	4124	genome.wustl.edu	37	5	109190857	109190857	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002372.2	+1	reviewed	p.S998L	0.136	232	0.9%	51	51%	10	50%	benign(0)	tolerated(0.08)	neutral(0.300)	superfamily_Gal_mut_like,HMMPfam_Glyco_hydro_38C
WDR36	134430	genome.wustl.edu	37	5	110439559	110439559	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139281.2	+1	reviewed	p.E280D	1.000	213	0%	56	39.3%	7	57.1%	possibly_damaging(0.719)	deleterious(0.02)	deleterious(0.643)	superfamily_Amine_DH_B_like,superfamily_WD40_like
STARD4	134429	genome.wustl.edu	37	5	110835763	110835763	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139164.1	-1	provisional	p.R147*	1.000	126	0%	56	35.7%	2	50%	-	-	-	HMMPfam_START,superfamily_SSF55961
EPB41L4A	64097	genome.wustl.edu	37	5	111500755	111500755	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022140.3	-1	validated	p.L665M	0.697	714	0%	357	18.8%	7	14.2%	benign(0.012)	tolerated(0.25)	neutral(0.037)	NULL
EPB41L4A	64097	genome.wustl.edu	37	5	111504467	111504467	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022140.3	-1	validated	p.A634V	1.000	257	0%	130	38.5%	6	66.6%	benign(0)	tolerated(0.22)	neutral(0.042)	NULL
EPB41L4A	64097	genome.wustl.edu	37	5	111519799	111519799	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022140.3	-1	validated	p.A512	0.528	145	0.7%	104	51.9%	3	33.3%	-	-	-	NULL
EPB41L4A	64097	genome.wustl.edu	37	5	111615981	111615981	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022140.3	-1	validated	p.E82*	1.000	377	0%	110	46.4%	4	75%	-	-	-	HMMPfam_FERM_N,PatternScan_FERM_1,HMMSmart_SM00295,superfamily_Ubiquitin-like
APC	324	genome.wustl.edu	37	5	112116551	112116551	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000038.4	+1	reviewed	p.A199V	1.000	239	0%	104	48.1%	4	50%	probably_damaging(0.997)	tolerated(1)	neutral(0.466)	superfamily_ARM repeat
APC	324	genome.wustl.edu	37	5	112151223	112151223	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000038.4	+1	reviewed	p.A289V	1.000	128	0%	34	41.2%	5	40%	possibly_damaging(0.648)	deleterious(0.02)	deleterious(0.611)	superfamily_ARM repeat
APC	324	genome.wustl.edu	37	5	112175587	112175587	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000038.4	+1	reviewed	p.P1432	0.995	135	0%	45	51.1%	4	50%	-	-	-	NULL
APC	324	genome.wustl.edu	37	5	112176966	112176966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000038.4	+1	reviewed	p.A1892V	1.000	244	0%	129	48.8%	6	50%	benign(0.013)	tolerated(0.08)	neutral(0.300)	NULL
ZRSR1	7310	genome.wustl.edu	37	5	112227802	112227802	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000391338	+1	known	p.T156A	0.806	342	0%	246	45.1%	0	-	benign(0.055)	tolerated(0.85)	neutral(0.004)	NULL
DCP2	167227	genome.wustl.edu	37	5	112337129	112337129	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152624.4	+1	validated	p.A221T	1.000	371	0%	138	23.9%	10	20%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	superfamily_Nudix
MCC	4163	genome.wustl.edu	37	5	112403858	112403858	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085377.1	-1	reviewed	p.E650K	1.000	20	0%	16	43.8%	12	50%	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	HMMPfam_MCC-bdg_PDZ
TRIM36	55521	genome.wustl.edu	37	5	114462325	114462325	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018700.3	-1	reviewed	p.L688I	1.000	261	0%	170	13.5%	2	0%	probably_damaging(0.991)	tolerated(0.24)	deleterious(0.481)	NULL
TRIM36	55521	genome.wustl.edu	37	5	114482894	114482894	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018700.3	-1	reviewed	p.E166*	1.000	282	0%	139	53.2%	1	100%	-	-	-	superfamily_RING/U-box
CCDC112	153733	genome.wustl.edu	37	5	114607290	114607290	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040440.2	-1	validated	p.K318Q	1.000	657	0%	291	44%	3	33.3%	benign(0.122)	tolerated(0.18)	neutral(0.066)	NULL
CCDC112	153733	genome.wustl.edu	37	5	114611039	114611039	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040440.2	-1	validated	p.K264	0.994	263	0%	96	39.6%	7	42.8%	-	-	-	NULL
CCDC112	153733	genome.wustl.edu	37	5	114611715	114611715	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040440.2	-1	validated	p.T168N	1.000	505	0%	155	40%	3	66.6%	probably_damaging(0.962)	tolerated(0.39)	neutral(0.421)	NULL
TMED7	51014	genome.wustl.edu	37	5	114956332	114956332	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181836.5	-1	validated	p.P80S	1.000	302	0%	122	42.6%	73	41%	probably_damaging(0.98)	deleterious(0.02)	deleterious(0.807)	HMMPfam_EMP24_GP25L,superfamily_SSF101576
CDO1	1036	genome.wustl.edu	37	5	115152060	115152060	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001801.2	-1	validated	p.L12P	1.000	14	0%	24	33.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CDO_I
AQPEP	206338	genome.wustl.edu	37	5	115346441	115346441	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173800.4	+1	validated	p.N699	0.970	370	0%	122	41%	0	-	-	-	-	NULL
DTWD2	285605	genome.wustl.edu	37	5	118274912	118274912	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173666.2	-1	validated	p.G128D	1.000	257	0%	119	38.7%	7	28.5%	probably_damaging(0.988)	tolerated(0.06)	deleterious(0.760)	HMMPfam_DTW
DMXL1	1657	genome.wustl.edu	37	5	118484933	118484933	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005509.4	+1	validated	p.K1137N	1.000	119	0%	38	55.3%	0	-	possibly_damaging(0.555)	deleterious(0.01)	deleterious(0.595)	NULL
DMXL1	1657	genome.wustl.edu	37	5	118505963	118505963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005509.4	+1	validated	p.R1826H	1.000	161	0%	66	39.4%	4	0%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
DMXL1	1657	genome.wustl.edu	37	5	118513838	118513838	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005509.4	+1	validated	p.R2345Q	1.000	67	0%	29	37.9%	6	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
DMXL1	1657	genome.wustl.edu	37	5	118533578	118533578	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005509.4	+1	validated	p.E2558K	1.000	256	0.4%	96	46.9%	6	50%	benign(0.119)	deleterious(0.02)	neutral(0.393)	superfamily_WD40 repeat-like
FTMT	94033	genome.wustl.edu	37	5	121187904	121187904	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177478.1	+1	validated	p.R82	1.000	13	0.000	7	0.571	0	-	-	-	-	HMMPfam_Ferritin,superfamily_Ferritin/RR_like
LOX	4015	genome.wustl.edu	37	5	121405794	121405794	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002317.5	-1	reviewed	p.R401C	1.000	83	0%	33	45.5%	77	44.1%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_Lysyl_oxidase
SNCAIP	9627	genome.wustl.edu	37	5	121787059	121787059	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005460.2	+1	reviewed	p.D839	0.000	68	0%	22	31.8%	9	55.5%	-	-	-	NULL
SNX2	6643	genome.wustl.edu	37	5	122152708	122152708	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003100.2	+1	reviewed	p.M299I	1.000	82	0%	55	36.4%	70	51.4%	possibly_damaging(0.493)	tolerated(0.06)	deleterious(0.487)	HMMPfam_Vps5
CEP120	153241	genome.wustl.edu	37	5	122748094	122748094	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153223.3	-1	reviewed	p.K154N	1.000	357	0%	241	50.6%	3	33.3%	benign(0.029)	tolerated(0.47)	neutral(0.012)	NULL
CSNK1G3	1456	genome.wustl.edu	37	5	122881476	122881476	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001044723.1	+1	validated	p.G40E	1.000	188	0%	64	40.6%	16	43.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Kinase_like
ZNF608	57507	genome.wustl.edu	37	5	123984142	123984142	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020747.2	-1	validated	p.S645	0.993	111	0%	89	43.8%	1	0%	-	-	-	NULL
MEGF10	84466	genome.wustl.edu	37	5	126676320	126676320	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032446.2	+1	validated	p.V106G	1.000	291	0%	81	37%	1	100%	possibly_damaging(0.799)	deleterious(0)	deleterious(0.746)	superfamily_EGF/Laminin
PRRC1	133619	genome.wustl.edu	37	5	126874755	126874755	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130809.3	+1	validated	p.S315	0.999	193	0%	109	46.8%	61	45.9%	-	-	-	superfamily_Maf/Ham1
SLC12A2	6558	genome.wustl.edu	37	5	127514267	127514267	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001046.2	+1	validated	p.G996C	1.000	369	0.3%	138	13.8%	69	18.8%	benign(0.394)	deleterious(0.02)	deleterious(0.510)	NULL
FBN2	2201	genome.wustl.edu	37	5	127595480	127595480	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001999.3	-1	reviewed	p.P2802	0.001	74	1.4%	44	50%	108	54.6%	-	-	-	NULL
FBN2	2201	genome.wustl.edu	37	5	127636612	127636612	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001999.3	-1	reviewed	p.V2021	0.943	76	0%	42	28.6%	32	34.3%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN2	2201	genome.wustl.edu	37	5	127713562	127713562	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001999.3	-1	reviewed	p.E578K	1.000	163	0%	40	40%	24	25%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
SLC27A6	28965	genome.wustl.edu	37	5	128359355	128359355	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017372.1	+1	reviewed	p.D403Y	1.000	279	0%	57	49.1%	1	0%	benign(0.011)	tolerated(0.18)	neutral(0.057)	HMMPfam_AMP-binding,superfamily_SSF56801
ISOC1	51015	genome.wustl.edu	37	5	128440924	128440924	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016048.2	+1	validated	p.Q159P	1.000	434	0%	189	45%	33	66.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Isochorismatase,superfamily_Iscrsm_hydrolase
ADAMTS19	171019	genome.wustl.edu	37	5	128983478	128983478	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133638.3	+1	reviewed	p.C625	1.000	63	0%	42	38.1%	9	55.5%	-	-	-	HMMSmart_SM00608
ADAMTS19	171019	genome.wustl.edu	37	5	129070797	129070797	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133638.3	+1	reviewed	p.R1156K	1.000	113	0%	32	37.5%	6	33.3%	probably_damaging(0.995)	tolerated(0.13)	deleterious(0.710)	NULL
CHSY3	337876	genome.wustl.edu	37	5	129519976	129519976	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175856.4	+1	validated	p.D381Y	1.000	76	0%	36	47.2%	1	0%	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	HMMPfam_CHGN
CHSY3	337876	genome.wustl.edu	37	5	129520286	129520286	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175856.4	+1	validated	p.R484L	1.000	47	0%	21	28.6%	1	100%	possibly_damaging(0.883)	deleterious(0.01)	deleterious(0.750)	HMMPfam_CHGN
HINT1	3094	genome.wustl.edu	37	5	130498168	130498168	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508488	-1	known	p.V73	0.000	79	0%	71	49.3%	3	33.3%	-	-	-	HMMPfam_HIT,superfamily_HIT-like
FNIP1	96459	genome.wustl.edu	37	5	131007866	131007866	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133372.2	-1	validated	p.D757E	1.000	251	0%	110	48.2%	9	44.4%	possibly_damaging(0.602)	tolerated(0.81)	neutral(0.209)	NULL
FNIP1	96459	genome.wustl.edu	37	5	131080378	131080378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133372.2	-1	validated	p.P33H	1.000	264	0%	105	38.1%	2	50%	possibly_damaging(0.78)	deleterious(0.02)	deleterious(0.674)	NULL
ACSL6	23305	genome.wustl.edu	37	5	131307307	131307307	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009185.1	-1	validated	p.V457A	1.000	33	0%	26	57.7%	0	-	benign(0.127)	tolerated(0.08)	neutral(0.310)	HMMPfam_AMP-binding,superfamily_SSF56801
ACSL6	23305	genome.wustl.edu	37	5	131309043	131309043	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009185.1	-1	validated	p.I373	1.000	39	0%	21	42.9%	0	-	-	-	-	HMMPfam_AMP-binding,superfamily_SSF56801
P4HA2	8974	genome.wustl.edu	37	5	131543569	131543569	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142599.1	-1	reviewed	p.R304	0.933	74	0%	51	45.1%	24	37.5%	-	-	-	NULL
IRF1	3659	genome.wustl.edu	37	5	131821943	131821943	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002198.2	-1	reviewed	p.A223P	1.000	15	0%	14	50%	15	0%	possibly_damaging(0.893)	tolerated(0.14)	deleterious(0.601)	NULL
RAD50	10111	genome.wustl.edu	37	5	131931411	131931411	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005732.3	+1	reviewed	p.R706*	1.000	79	0%	24	41.7%	8	12.5%	-	-	-	HMMPfam_SMC_N,HMMPfam_Rad50_zn_hook,superfamily_Spectrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases
RAD50	10111	genome.wustl.edu	37	5	131940623	131940623	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005732.3	+1	reviewed	p.R884C	0.997	215	0%	82	42.7%	6	66.6%	possibly_damaging(0.682)	deleterious(0.02)	deleterious(0.626)	HMMPfam_SMC_N,superfamily_Prefoldin,superfamily_P-loop containing nucleoside triphosphate hydrolases
RAD50	10111	genome.wustl.edu	37	5	131953803	131953803	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005732.3	+1	reviewed	p.R1069I	1.000	266	0%	140	45.7%	3	100%	possibly_damaging(0.627)	deleterious(0.02)	deleterious(0.602)	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF3A	11127	genome.wustl.edu	37	5	132038594	132038594	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007054.5	-1	validated	p.E517*	1.000	471	0%	244	45.9%	6	33.3%	-	-	-	NULL
UQCRQ	27089	genome.wustl.edu	37	5	132203231	132203231	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014402.4	+1	reviewed	p.R69I	0.816	429	0%	264	50%	869	43.6%	possibly_damaging(0.509)	tolerated(0.08)	deleterious(0.471)	HMMPfam_UcrQ,superfamily_UcrQ
AFF4	27125	genome.wustl.edu	37	5	132232025	132232025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014423.3	-1	validated	p.R766M	1.000	207	0%	117	40.2%	17	29.4%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_AF-4
HSPA4	3308	genome.wustl.edu	37	5	132409801	132409801	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002154.3	+1	validated	p.N216D	1.000	201	0%	86	37.2%	36	11.1%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_HSP70,superfamily_SSF53067
HSPA4	3308	genome.wustl.edu	37	5	132431913	132431913	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002154.3	+1	validated	p.E592*	1.000	174	0%	85	40%	83	1.2%	-	-	-	HMMPfam_HSP70,superfamily_SSF100920
TCF7	6932	genome.wustl.edu	37	5	133478506	133478506	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003202.3	+1	validated	p.R284G	0.960	57	0%	46	37%	16	37.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box
SAR1B	51128	genome.wustl.edu	37	5	133942678	133942678	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033503.2	-1	reviewed	p.G187R	1.000	182	0%	107	37.4%	91	36.2%	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	HMMSmart_SAR,PatternScan_SAR1,HMMPfam_Arf,superfamily_SSF52540
SAR1B	51128	genome.wustl.edu	37	5	133942748	133942748	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033503.2	-1	reviewed	p.I163M	0.216	176	0%	85	45.9%	63	50.7%	benign(0.177)	deleterious(0.03)	neutral(0.381)	HMMSmart_SAR,HMMPfam_Arf,superfamily_SSF52540
SEC24A	10802	genome.wustl.edu	37	5	133997231	133997231	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021982.1	+1	validated	p.V174I	1.000	200	0%	90	46.7%	17	47%	benign(0.002)	deleterious(0.04)	neutral(0.349)	NULL
DDX46	9879	genome.wustl.edu	37	5	134099692	134099692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014829.2	+1	reviewed	p.R39Q	1.000	122	0%	86	44.2%	22	50%	unknown(0)	tolerated(0.35)	-	NULL
DDX46	9879	genome.wustl.edu	37	5	134117647	134117647	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014829.2	+1	reviewed	p.A306T	1.000	207	0%	58	32.8%	20	50%	benign(0.002)	tolerated(0.74)	neutral(0.002)	superfamily_SSF52540
H2AFY	9555	genome.wustl.edu	37	5	134696262	134696262	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138610.2	-1	reviewed	p.A171	0.954	21	0%	28	53.6%	250	50.4%	-	-	-	NULL
NEUROG1	4762	genome.wustl.edu	37	5	134870742	134870742	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006161.2	-1	validated	p.G213	0.111	62	0%	57	45.6%	0	-	-	-	-	NULL
LOC153328	153328	genome.wustl.edu	37	5	135188504	135188504	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145282.4	+1	validated	p.R139W	0.936	15	0.000	9	0.556	4	25%	possibly_damaging(0.747)	deleterious(0.03)	deleterious(0.639)	superfamily_Mitoch_carrier
SMAD5	4090	genome.wustl.edu	37	5	135499039	135499039	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398807	+1	known	p.N245T	0.999	339	0%	133	39.1%	16	56.2%	benign(0)	tolerated(0.47)	neutral(0.011)	superfamily_SMAD/FHA domain
TRPC7	57113	genome.wustl.edu	37	5	135610445	135610445	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378459	-1	known	p.R287C	0.997	84	0%	38	50%	0	-	-	-	-	NULL
KLHL3	26249	genome.wustl.edu	37	5	137056182	137056182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017415.2	-1	validated	p.A36T	1.000	91	0%	43	32.6%	4	50%	possibly_damaging(0.61)	tolerated(0.75)	neutral(0.213)	superfamily_POZ domain
BRD8	10902	genome.wustl.edu	37	5	137476545	137476545	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139199.1	-1	reviewed	p.R1155I	1.000	108	0.9%	73	49.3%	0	-	possibly_damaging(0.432)	deleterious(0)	deleterious(0.585)	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain
BRD8	10902	genome.wustl.edu	37	5	137481533	137481533	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139199.1	-1	reviewed	p.H1105N	1.000	127	0%	61	57.4%	0	-	benign(0.029)	tolerated(0.27)	neutral(0.035)	HMMSmart_SM00297,superfamily_Bromodomain
BRD8	10902	genome.wustl.edu	37	5	137485341	137485341	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139199.1	-1	reviewed	p.T1089I	0.942	98	0%	63	15.9%	0	-	possibly_damaging(0.789)	tolerated(0.06)	deleterious(0.619)	superfamily_Bromodomain
KIF20A	10112	genome.wustl.edu	37	5	137521300	137521300	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005733.2	+1	validated	p.R676W	0.999	48	0%	16	56.2%	38	31.5%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
CDC25C	995	genome.wustl.edu	37	5	137621497	137621497	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001790.3	-1	reviewed	p.H436Y	1.000	53	0%	43	23.3%	12	33.3%	possibly_damaging(0.942)	tolerated(0.33)	neutral(0.411)	superfamily_Rhodanese/Cell cycle control phosphatase
ETF1	2107	genome.wustl.edu	37	5	137854380	137854380	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004730.2	-1	validated	e2+1	1.000	266	0%	137	43.1%	1	100%	-	-	-	-
LRRTM2	26045	genome.wustl.edu	37	5	138209551	138209551	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015564.2	-1	validated	p.T233	0.511	130	0%	68	36.8%	0	-	-	-	-	HMMSmart_SM00369,superfamily_L domain-like
MATR3	9782	genome.wustl.edu	37	5	138643718	138643718	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018834.4	+1	reviewed	p.G205E	1.000	296	0%	118	19.5%	87	22.9%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MATR3	9782	genome.wustl.edu	37	5	138661066	138661066	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000394800	+1	known	p.R744C	1.000	36	0%	26	26.9%	7	14.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
MZB1	51237	genome.wustl.edu	37	5	138724248	138724248	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016459.3	-1	validated	p.E68D	1.000	35	0%	37	35.1%	6	0%	probably_damaging(0.999)	tolerated(0.38)	deleterious(0.508)	NULL
SPATA24	202051	genome.wustl.edu	37	5	138737701	138737701	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194296.1	-1	validated	p.L73I	1.000	114	0%	88	48.9%	3	100%	probably_damaging(0.955)	tolerated(0.26)	neutral(0.432)	NULL
TMEM173	340061	genome.wustl.edu	37	5	138858024	138858024	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198282.2	-1	validated	p.R197Q	0.955	46	0%	53	37.7%	19	68.4%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
TMEM173	340061	genome.wustl.edu	37	5	138860463	138860463	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198282.2	-1	validated	p.I144	0.997	27	0%	27	48.1%	21	42.8%	-	-	-	NULL
NRG2	9542	genome.wustl.edu	37	5	139267068	139267068	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378238	-1	known	p.E103*	1.000	61	0%	68	17.6%	3	100%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
PCDHA1	56147	genome.wustl.edu	37	5	140167581	140167581	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018900.2	+1	reviewed	p.R569Q	0.000	18	0%	27	59.3%	3	66.6%	benign(0.007)	tolerated(0.3)	neutral(0.029)	superfamily_Cadherin-like
PCDHA2	56146	genome.wustl.edu	37	5	140176250	140176250	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018905.2	+1	reviewed	p.A567	0.302	44	0%	31	54.8%	3	33.3%	-	-	-	superfamily_Cadherin-like
PCDHA4	56144	genome.wustl.edu	37	5	140187546	140187546	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018907.2	+1	reviewed	p.G258	0.902	97	0%	54	42.6%	1	100%	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHA4	56144	genome.wustl.edu	37	5	140188315	140188315	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018907.2	+1	reviewed	p.G515S	1.000	6	0.000	9	0.444	6	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA5	56143	genome.wustl.edu	37	5	140202004	140202004	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018908.2	+1	reviewed	p.D215A	1.000	182	0%	91	48.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA5	56143	genome.wustl.edu	37	5	140202812	140202812	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018908.2	+1	reviewed	p.Q484H	0.492	10	0%	18	38.9%	1	100%	benign(0.014)	tolerated(0.09)	neutral(0.297)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA5	56143	genome.wustl.edu	37	5	140203361	140203361	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018908.2	+1	reviewed	p.S667	0.573	11	0%	11	36.4%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA6	56142	genome.wustl.edu	37	5	140209851	140209851	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018909.2	+1	reviewed	p.A725	0.001	9	0.000	15	0.600	5	20%	-	-	-	NULL
PCDHA7	56141	genome.wustl.edu	37	5	140216143	140216143	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018910.2	+1	reviewed	p.A725	0.000	26	0%	33	54.5%	2	50%	-	-	-	NULL
PCDHA8	56140	genome.wustl.edu	37	5	140221695	140221695	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018911.2	+1	reviewed	p.K263N	0.004	79	0%	57	22.8%	0	-	benign(0)	tolerated(0.05)	neutral(0.345)	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHA9	9752	genome.wustl.edu	37	5	140229204	140229204	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031857.1	+1	reviewed	p.I375T	0.000	82	0%	66	43.9%	0	-	benign(0)	tolerated(0.67)	neutral(0.003)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA9	9752	genome.wustl.edu	37	5	140229446	140229446	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031857.1	+1	reviewed	p.A456T	0.023	8	0.000	24	0.333	0	-	benign(0.004)	tolerated(0.33)	neutral(0.024)	superfamily_Cadherin-like
PCDHA9	9752	genome.wustl.edu	37	5	140230284	140230284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031857.1	+1	reviewed	p.G735D	0.163	26	0%	28	50%	1	0%	benign(0.019)	deleterious(0.04)	neutral(0.350)	NULL
PCDHA10	56139	genome.wustl.edu	37	5	140235991	140235991	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018901.2	+1	reviewed	p.V120M	1.000	56	0%	58	32.8%	2	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHA10	56139	genome.wustl.edu	37	5	140236098	140236098	+	Silent	SNP	C	C	T	rs17844340	byCluster;byFrequency	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018901.2	+1	reviewed	p.G155	0.964	85	0%	71	36.6%	3	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA10	56139	genome.wustl.edu	37	5	140237293	140237293	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018901.2	+1	reviewed	p.V554M	1.000	24	0%	19	52.6%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHA13	56136	genome.wustl.edu	37	5	140263386	140263386	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018904.2	+1	reviewed	p.H511	1.000	5	0.000	14	0.643	1	100%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHAC1	56135	genome.wustl.edu	37	5	140307051	140307051	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018898.3	+1	reviewed	p.D192Y	1.000	12	0%	12	33.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHAC1	56135	genome.wustl.edu	37	5	140307608	140307608	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018898.3	+1	reviewed	p.C377	0.061	95	0%	81	23.5%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHB1	29930	genome.wustl.edu	37	5	140433222	140433222	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013340.2	+1	reviewed	p.K723Q	0.508	298	0%	120	38.3%	0	-	possibly_damaging(0.919)	tolerated(0.32)	neutral(0.394)	NULL
PCDHB1	29930	genome.wustl.edu	37	5	140433348	140433348	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013340.2	+1	reviewed	p.N765D	0.036	168	0%	106	46.2%	0	-	benign(0.08)	tolerated(0.08)	neutral(0.305)	NULL
ENSG00000248756	0	genome.wustl.edu	37	5	140474266	140474266	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000510498	-1	novel	NULL	0.000	17	0%	14	35.7%	11	54.5%	-	-	-	-
PCDHB2	56133	genome.wustl.edu	37	5	140475962	140475962	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018936.2	+1	reviewed	p.E530K	0.970	16	0%	15	40%	20	65%	benign(0.016)	tolerated(0.21)	neutral(0.044)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB3	56132	genome.wustl.edu	37	5	140481365	140481365	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018937.2	+1	reviewed	p.N378D	1.000	96	0%	68	41.2%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHB4	56131	genome.wustl.edu	37	5	140503158	140503158	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018938.2	+1	reviewed	p.F526	0.894	21	0%	15	40%	2	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB5	26167	genome.wustl.edu	37	5	140515315	140515315	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015669.2	+1	reviewed	p.E100G	0.300	59	0%	69	47.8%	1	0%	benign(0.047)	tolerated(0.07)	neutral(0.322)	HMMPfam_Cadherin_2,superfamily_Cadherin
PCDHB17	54661	genome.wustl.edu	37	5	140536978	140536978	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_001280.1	+1	provisional	NULL	1.000	29	0%	32	31.2%	2	0%	possibly_damaging(0.843)	deleterious(0)	deleterious(0.768)	-
PCDHB7	56129	genome.wustl.edu	37	5	140553608	140553608	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018940.2	+1	reviewed	p.E398K	0.014	63	0%	48	50%	7	14.2%	benign(0.001)	tolerated(0.83)	neutral(0.001)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHB16	57717	genome.wustl.edu	37	5	140563062	140563062	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020957.1	+1	reviewed	p.E310K	1.000	92	0%	51	45.1%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB16	57717	genome.wustl.edu	37	5	140563116	140563116	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020957.1	+1	reviewed	p.S328P	0.151	98	0%	57	38.6%	7	57.1%	benign(0.053)	tolerated(0.06)	neutral(0.326)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB11	56125	genome.wustl.edu	37	5	140579497	140579497	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018931.2	+1	reviewed	p.K50N	0.987	89	0%	97	49.5%	2	0%	possibly_damaging(0.893)	deleterious(0.04)	deleterious(0.701)	HMMPfam_Cadherin_2,superfamily_Cadherin
PCDHB12	56124	genome.wustl.edu	37	5	140588661	140588661	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018932.3	+1	reviewed	p.S61L	0.000	143	0%	118	45.8%	1	0%	benign(0.103)	deleterious(0.03)	neutral(0.372)	HMMSmart_CA,HMMPfam_Cadherin_2,superfamily_Cadherin
PCDHB12	56124	genome.wustl.edu	37	5	140589455	140589455	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018932.3	+1	reviewed	p.G326*	0.998	147	0%	101	20.8%	1	100%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB12	56124	genome.wustl.edu	37	5	140589869	140589869	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018932.3	+1	reviewed	p.N464D	1.000	39	0%	37	48.6%	3	66.6%	benign(0.402)	deleterious(0)	deleterious(0.574)	HMMPfam_Cadherin,superfamily_Cadherin
PCDHB13	56123	genome.wustl.edu	37	5	140595021	140595021	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018933.2	+1	reviewed	p.A442	0.454	62	0%	63	57.1%	3	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
ENSG00000250800	0	genome.wustl.edu	37	5	140596145	140596145	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000507840	-1	novel	NULL	0.000	57	0%	52	48.1%	3	66.6%	-	-	-	-
PCDHB14	56122	genome.wustl.edu	37	5	140603207	140603207	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018934.2	+1	reviewed	p.F44V	0.949	145	0%	123	56.1%	4	25%	benign(0.018)	tolerated(0.07)	neutral(0.320)	HMMPfam_Cadherin_2,superfamily_Cadherin
PCDHB18	54660	genome.wustl.edu	37	5	140615575	140615575	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000274705	+1	known	p.N430	0.997	25	0%	25	32%	4	50%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHGA1	56114	genome.wustl.edu	37	5	140712357	140712357	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018912.2	+1	reviewed	p.C702	0.802	23	0%	30	46.7%	1	0%	-	-	-	NULL
PCDHGA3	56112	genome.wustl.edu	37	5	140723798	140723798	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018916.3	+1	reviewed	p.I66	0.964	24	0%	23	56.5%	0	-	-	-	-	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGA3	56112	genome.wustl.edu	37	5	140724582	140724582	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018916.3	+1	reviewed	p.L328I	0.000	64	0%	77	41.6%	0	-	benign(0.141)	tolerated(0.44)	neutral(0.025)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA3	56112	genome.wustl.edu	37	5	140725753	140725753	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018916.3	+1	reviewed	p.R718H	0.623	30	0%	47	40.4%	0	-	benign(0.075)	tolerated(0.14)	neutral(0.255)	NULL
PCDHGB1	56104	genome.wustl.edu	37	5	140732115	140732115	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018922.2	+1	reviewed	p.S763Y	1.000	113	0%	82	45.1%	4	50%	benign(0)	tolerated(0.62)	neutral(0.004)	NULL
PCDHGB2	56103	genome.wustl.edu	37	5	140739704	140739704	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018923.2	+1	reviewed	p.M1T	0.985	39	0%	41	43.9%	4	50%	possibly_damaging(0.55)	deleterious(0)	deleterious(0.631)	NULL
PCDHGA5	56110	genome.wustl.edu	37	5	140744906	140744906	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018918.2	+1	reviewed	p.V337L	0.988	62	0%	66	50%	2	0%	benign(0.216)	tolerated(0.1)	neutral(0.307)	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHGA5	56110	genome.wustl.edu	37	5	140745437	140745437	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018918.2	+1	reviewed	p.L514	0.229	59	0%	59	10.2%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA5	56110	genome.wustl.edu	37	5	140745946	140745946	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018918.2	+1	reviewed	p.D683	0.000	19	0%	16	31.2%	2	50%	-	-	-	NULL
PCDHGB3	56102	genome.wustl.edu	37	5	140750061	140750061	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018924.2	+1	reviewed	p.R34C	0.988	32	0%	41	31.7%	0	-	-	-	-	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGB3	56102	genome.wustl.edu	37	5	140752193	140752193	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018924.2	+1	reviewed	p.S744	0.000	139	0%	99	46.5%	1	0%	-	-	-	NULL
PCDHGA6	56109	genome.wustl.edu	37	5	140754561	140754561	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018919.2	+1	reviewed	p.S304F	0.000	60	0%	55	56.4%	0	-	benign(0.001)	deleterious(0.04)	neutral(0.349)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA7	56108	genome.wustl.edu	37	5	140762760	140762760	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018920.2	+1	reviewed	p.Q98H	0.071	34	0%	23	17.4%	1	0%	possibly_damaging(0.945)	deleterious(0.02)	deleterious(0.772)	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGA7	56108	genome.wustl.edu	37	5	140763846	140763846	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018920.2	+1	reviewed	p.Y460	0.000	109	0%	88	38.6%	0	-	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHGA8	9708	genome.wustl.edu	37	5	140773793	140773793	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032088.1	+1	reviewed	p.I471	1.000	44	0%	29	55.2%	1	0%	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHGA8	9708	genome.wustl.edu	37	5	140774459	140774459	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032088.1	+1	reviewed	p.L693	0.972	17	0%	25	52%	0	-	-	-	-	NULL
PCDHGB5	56101	genome.wustl.edu	37	5	140778846	140778846	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018925.2	+1	reviewed	p.G384	0.000	181	0%	140	40.7%	4	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA10	56106	genome.wustl.edu	37	5	140793360	140793360	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018913.2	+1	reviewed	p.R206	0.003	13	0%	12	58.3%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA10	56106	genome.wustl.edu	37	5	140793564	140793564	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018913.2	+1	reviewed	p.D274	0.982	38	0%	23	43.5%	1	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGB7	56099	genome.wustl.edu	37	5	140797886	140797886	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018927.2	+1	reviewed	p.L154I	0.756	213	0%	171	45.6%	0	-	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHGA11	56105	genome.wustl.edu	37	5	140801033	140801033	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018914.2	+1	reviewed	p.P80L	0.000	15	0%	28	32.1%	0	-	benign(0.001)	tolerated(0.7)	neutral(0.002)	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGA11	56105	genome.wustl.edu	37	5	140801451	140801451	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018914.2	+1	reviewed	p.G219	0.972	19	0%	13	38.5%	1	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA11	56105	genome.wustl.edu	37	5	140801969	140801969	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018914.2	+1	reviewed	p.P392H	1.000	118	0%	48	39.6%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA11	56105	genome.wustl.edu	37	5	140803070	140803070	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018914.2	+1	reviewed	p.S759Y	0.168	70	0%	66	33.3%	1	0%	probably_damaging(0.999)	tolerated(0.44)	deleterious(0.503)	NULL
PCDHGA12	26025	genome.wustl.edu	37	5	140811003	140811003	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003735.2	+1	reviewed	p.A226V	0.003	13	0.000	9	0.667	2	100%	benign(0.001)	tolerated(0.67)	neutral(0.003)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA12	26025	genome.wustl.edu	37	5	140811488	140811488	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003735.2	+1	reviewed	p.G388R	0.002	65	0%	30	36.7%	0	-	benign(0)	tolerated(0.5)	neutral(0.010)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA12	26025	genome.wustl.edu	37	5	140812036	140812036	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003735.2	+1	reviewed	p.D570	0.002	15	0%	19	47.4%	0	-	-	-	-	superfamily_Cadherin-like
PCDHGC3	5098	genome.wustl.edu	37	5	140857144	140857144	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002588.2	+1	reviewed	p.P487	0.030	103	0%	106	47.2%	2	100%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGC4	56098	genome.wustl.edu	37	5	140865292	140865292	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018928.2	+1	reviewed	p.K184	1.000	19	0%	10	40%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGC5	56097	genome.wustl.edu	37	5	140869456	140869456	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018929.2	+1	reviewed	p.G217R	1.000	33	0%	22	40.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGC5	56097	genome.wustl.edu	37	5	140870688	140870688	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018929.2	+1	reviewed	p.E627D	1.000	26	0%	30	53.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DIAPH1	1729	genome.wustl.edu	37	5	140962803	140962803	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005219.4	-1	reviewed	p.R197Q	1.000	149	0%	72	47.2%	35	57.1%	probably_damaging(0.978)	tolerated(0.18)	deleterious(0.476)	HMMPfam_Drf_GBD
HDAC3	8841	genome.wustl.edu	37	5	141009646	141009646	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003883.3	-1	reviewed	p.A110T	0.998	74	0%	50	52%	34	17.6%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Hist_deacetyl,superfamily_Arginase/deacetylase
HDAC3	8841	genome.wustl.edu	37	5	141014391	141014391	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003883.3	-1	reviewed	p.V90I	1.000	62	0%	50	36%	34	58.8%	benign(0)	tolerated(0.29)	neutral(0.029)	HMMPfam_Hist_deacetyl,superfamily_Arginase/deacetylase
PCDH12	51294	genome.wustl.edu	37	5	141335739	141335739	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016580.2	-1	reviewed	p.D560Y	1.000	13	0%	19	47.4%	8	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
NR3C1	2908	genome.wustl.edu	37	5	142779750	142779750	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024094.1	-1	reviewed	p.I219L	1.000	92	0%	75	37.3%	0	-	benign(0)	tolerated(0.29)	neutral(0.029)	HMMPfam_GCR
YIPF5	81555	genome.wustl.edu	37	5	143545130	143545130	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024947.2	-1	validated	p.F50C	0.999	236	0%	125	45.6%	45	53.3%	possibly_damaging(0.915)	tolerated(0.08)	deleterious(0.666)	NULL
SH3RF2	153769	genome.wustl.edu	37	5	145317746	145317746	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152550.3	+1	validated	p.G85	0.000	17	0%	18	38.9%	8	62.5%	-	-	-	NULL
LARS	51520	genome.wustl.edu	37	5	145493791	145493791	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020117.9	-1	reviewed	p.E1137K	0.977	119	0%	51	37.3%	98	42.8%	benign(0.062)	tolerated(0.24)	neutral(0.041)	NULL
RBM27	54439	genome.wustl.edu	37	5	145664204	145664204	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018989.1	+1	validated	p.K1003T	1.000	201	0%	57	38.6%	11	36.3%	probably_damaging(0.99)	tolerated(0.2)	deleterious(0.490)	NULL
PPP2R2B	5521	genome.wustl.edu	37	5	145979974	145979974	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181676.2	-1	reviewed	p.I283M	1.000	189	0.5%	87	41.4%	0	-	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	HMMSmart_SM00320,superfamily_WD40 repeat-like
DPYSL3	1809	genome.wustl.edu	37	5	146775168	146775168	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001387.2	-1	validated	p.P526	0.006	32	0%	26	53.8%	13	53.8%	-	-	-	NULL
JAKMIP2	9832	genome.wustl.edu	37	5	146997649	146997649	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014790.3	-1	provisional	p.Y724C	1.000	266	0%	132	34.8%	1	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
SPINK5	11005	genome.wustl.edu	37	5	147443688	147443688	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398459	+1	known	p.S27	0.006	157	0%	63	31.7%	0	-	-	-	-	superfamily_SSF100895
SPINK5	11005	genome.wustl.edu	37	5	147451757	147451757	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127698.1	+1	reviewed	p.A86T	0.821	97	0%	28	53.6%	0	-	possibly_damaging(0.748)	deleterious(0)	deleterious(0.719)	HMMPfam_Kazal_2
SPINK13	153218	genome.wustl.edu	37	5	147661693	147661693	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040129.2	+1	provisional	p.L45	0.000	156	0%	82	20.7%	0	-	-	-	-	superfamily_Kazal-type serine protease inhibitors
SPINK7	84651	genome.wustl.edu	37	5	147693745	147693745	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032566.2	+1	validated	p.Y57C	1.000	163	0%	48	45.8%	1	0%	probably_damaging(0.998)	tolerated(0.07)	deleterious(0.793)	HMMPfam_Kazal_1,HMMSmart_KAZAL,PatternScan_KAZAL,superfamily_SSF100895
FBXO38	81545	genome.wustl.edu	37	5	147774449	147774449	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205836.1	+1	validated	p.V37A	1.000	328	0%	109	38.5%	2	50%	benign(0.081)	deleterious(0)	neutral(0.451)	HMMPfam_F-box,superfamily_F-box domain
FBXO38	81545	genome.wustl.edu	37	5	147805255	147805255	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205836.1	+1	validated	p.E637*	1.000	105	0%	56	53.6%	9	11.1%	-	-	-	NULL
HTR4	3360	genome.wustl.edu	37	5	147889301	147889301	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040173.2	-1	reviewed	p.M265T	1.000	38	0%	25	40%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
ADRB2	154	genome.wustl.edu	37	5	148206692	148206692	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000024.5	+1	reviewed	p.T100A	0.723	93	0%	71	39.4%	6	33.3%	benign(0)	tolerated(0.51)	neutral(0.009)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
AFAP1L1	134265	genome.wustl.edu	37	5	148699264	148699264	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152406.2	+1	validated	p.I533	1.000	26	0%	17	52.9%	2	50%	-	-	-	NULL
AFAP1L1	134265	genome.wustl.edu	37	5	148702273	148702273	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152406.2	+1	validated	p.H601	0.483	17	0%	20	40%	1	0%	-	-	-	NULL
PCYOX1L	78991	genome.wustl.edu	37	5	148745641	148745641	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024028.3	+1	validated	p.R203C	1.000	14	0%	26	42.3%	12	25%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_Prenylcys_lyase,superfamily_FAD/NAD(P)-binding domain
SLC26A2	1836	genome.wustl.edu	37	5	149357555	149357555	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000112.3	+1	reviewed	p.S114P	1.000	218	0%	121	43.8%	9	55.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SLC26A2	1836	genome.wustl.edu	37	5	149361167	149361167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000112.3	+1	reviewed	p.R671C	1.000	90	0%	45	53.3%	12	58.3%	benign(0.078)	tolerated(0.18)	neutral(0.061)	HMMPfam_STAS,superfamily_STAS
CSF1R	1436	genome.wustl.edu	37	5	149450108	149450108	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005211.3	-1	reviewed	p.R370H	1.000	37	0%	22	36.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_IG,superfamily_SSF48726
PDGFRB	5159	genome.wustl.edu	37	5	149513484	149513484	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002609.3	-1	reviewed	p.N240S	0.044	49	0%	28	42.9%	21	0%	benign(0.029)	tolerated(0.98)	neutral(0.002)	HMMSmart_IGc2,HMMPfam_ig,superfamily_SSF48726
SLC6A7	6534	genome.wustl.edu	37	5	149582159	149582159	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014228.3	+1	validated	p.T327I	1.000	31	0%	31	16.1%	0	-	possibly_damaging(0.469)	deleterious(0.01)	deleterious(0.559)	HMMPfam_SNF
CAMK2A	815	genome.wustl.edu	37	5	149633037	149633037	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015981.3	-1	reviewed	p.E162*	1.000	40	0%	28	46.4%	0	-	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
LOC100287940	100287940	genome.wustl.edu	37	5	149677950	149677950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342566.1	+1	model	p.G267C	0.995	19	0%	30	46.7%	3	33.3%	-	-	-	NULL
TCOF1	6949	genome.wustl.edu	37	5	149755423	149755423	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135243.1	+1	reviewed	p.S615L	0.020	23	0%	21	42.9%	41	53.6%	possibly_damaging(0.873)	tolerated(0.23)	neutral(0.381)	HMMPfam_Treacle
NDST1	3340	genome.wustl.edu	37	5	149915384	149915384	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001543.4	+1	validated	p.T458	0.011	18	0%	14	57.1%	31	45.1%	-	-	-	NULL
NDST1	3340	genome.wustl.edu	37	5	149919785	149919785	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001543.4	+1	validated	p.Y570H	1.000	24	0%	15	46.7%	19	52.6%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	NULL
NDST1	3340	genome.wustl.edu	37	5	149924914	149924914	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001543.4	+1	validated	p.D671N	1.000	53	0%	44	52.3%	32	40.6%	possibly_damaging(0.801)	tolerated(0.23)	neutral(0.343)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
NDST1	3340	genome.wustl.edu	37	5	149929316	149929316	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001543.4	+1	validated	p.V798A	1.000	86	0%	65	47.7%	16	25%	benign(0.185)	tolerated(0.14)	neutral(0.267)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
SYNPO	11346	genome.wustl.edu	37	5	149997993	149997993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000314840	+1	known	p.A22T	0.000	6	0.000	15	0.533	0	-	benign(0)	tolerated(1)	-	NULL
SYNPO	11346	genome.wustl.edu	37	5	150029010	150029010	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007286.5	+1	validated	p.P391	0.485	10	0%	18	44.4%	7	0%	-	-	-	NULL
DCTN4	51164	genome.wustl.edu	37	5	150090797	150090797	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135643.1	-1	validated	p.R440C	1.000	92	0%	71	43.7%	29	44.8%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_Dynactin_p62
ZNF300	91975	genome.wustl.edu	37	5	150275163	150275163	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052860.2	-1	reviewed	p.E546D	1.000	177	0%	60	56.7%	0	-	possibly_damaging(0.53)	deleterious(0)	deleterious(0.623)	superfamily_C2H2 and C2HC zinc fingers
ANXA6	309	genome.wustl.edu	37	5	150503912	150503912	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001155.3	-1	reviewed	p.R358H	0.930	58	0%	51	41.2%	263	39.5%	benign(0)	tolerated(0.24)	neutral(0.037)	superfamily_Annexin
SLC36A2	153201	genome.wustl.edu	37	5	150714888	150714888	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181776.2	-1	validated	e6+2	0.996	76	0%	48	45.8%	0	-	-	-	-	-
SLC36A1	206358	genome.wustl.edu	37	5	150858974	150858974	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_078483.2	+1	reviewed	p.F361L	0.022	89	0%	67	40.3%	2	0%	benign(0)	tolerated(0.65)	neutral(0.003)	HMMPfam_Aa_trans
SPARC	6678	genome.wustl.edu	37	5	151043770	151043770	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003118.2	-1	provisional	p.P254Q	1.000	17	0%	30	40%	464	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SPARC_Ca_bdg,superfamily_EF-hand
ATOX1	475	genome.wustl.edu	37	5	151125930	151125930	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004045.3	-1	reviewed	p.L55	0.972	89	0%	69	26.1%	160	46.8%	-	-	-	HMMPfam_HMA,superfamily_HMA heavy metal-associated domain
GLRA1	2741	genome.wustl.edu	37	5	151235874	151235874	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000171.3	-1	reviewed	p.Q183*	1.000	102	0%	92	32.6%	0	-	-	-	-	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
GRIA1	2890	genome.wustl.edu	37	5	153056610	153056610	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000827.3	+1	reviewed	p.S306	1.000	35	0%	30	40%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIA1	2890	genome.wustl.edu	37	5	153065856	153065856	+	Silent	SNP	C	C	T	rs142420782	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000827.3	+1	reviewed	p.H367	0.999	86	0%	55	47.3%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIA1	2890	genome.wustl.edu	37	5	153085276	153085276	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000827.3	+1	reviewed	p.A491V	1.000	118	0%	41	36.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II
GRIA1	2890	genome.wustl.edu	37	5	153085444	153085444	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000827.3	+1	reviewed	p.Y547C	1.000	402	0.2%	163	47.2%	0	-	probably_damaging(0.997)	tolerated(0.13)	deleterious(0.719)	HMMPfam_Lig_chan,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II
HAND1	9421	genome.wustl.edu	37	5	153857327	153857327	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004821.2	-1	reviewed	p.S81N	1.000	6	0.000	13	0.385	0	-	benign(0.039)	tolerated(0.35)	neutral(0.022)	NULL
LARP1	23367	genome.wustl.edu	37	5	154173816	154173816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015315.3	+1	validated	p.R332H	1.000	65	0%	72	48.6%	63	41.2%	possibly_damaging(0.765)	deleterious(0.05)	deleterious(0.629)	HMMPfam_La,HMMSmart_LA,superfamily_SSF46785
LARP1	23367	genome.wustl.edu	37	5	154183160	154183160	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015315.3	+1	validated	p.R688H	1.000	103	0%	72	40.3%	99	38.3%	benign(0.083)	tolerated(0.24)	neutral(0.043)	NULL
GEMIN5	25929	genome.wustl.edu	37	5	154271271	154271271	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015465.3	-1	validated	p.D1264	0.242	36	0%	29	34.5%	15	46.6%	-	-	-	NULL
KIF4B	285643	genome.wustl.edu	37	5	154393955	154393955	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099293.1	+1	provisional	p.K179T	0.958	323	0%	178	38.2%	0	-	benign(0.332)	tolerated(0.22)	neutral(0.146)	HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540
KIF4B	285643	genome.wustl.edu	37	5	154395589	154395589	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099293.1	+1	provisional	p.V724F	0.897	177	0%	131	38.9%	0	-	probably_damaging(0.976)	deleterious(0.03)	deleterious(0.782)	NULL
SGCD	6444	genome.wustl.edu	37	5	156074519	156074519	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000337.5	+1	reviewed	p.V183A	1.000	221	0%	60	40%	1	0%	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	HMMPfam_Sarcoglycan_1
HAVCR2	84868	genome.wustl.edu	37	5	156533902	156533902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032782.3	-1	validated	p.A44T	0.000	29	0%	23	34.8%	3	0%	benign(0)	tolerated(0.45)	neutral(0.012)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
MED7	9443	genome.wustl.edu	37	5	156566251	156566251	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100816.1	-1	reviewed	p.I64	0.963	148	0.7%	96	43.8%	13	38.4%	-	-	-	HMMPfam_MED7
FAM71B	153745	genome.wustl.edu	37	5	156590335	156590335	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130899.2	-1	validated	p.A314V	0.001	63	0%	20	55%	0	-	benign(0.144)	tolerated(0.21)	neutral(0.056)	NULL
FAM71B	153745	genome.wustl.edu	37	5	156592849	156592849	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130899.2	-1	validated	p.R111C	0.128	64	0%	38	42.1%	0	-	possibly_damaging(0.867)	tolerated(0.24)	neutral(0.374)	NULL
ITK	3702	genome.wustl.edu	37	5	156670797	156670797	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005546.3	+1	reviewed	p.V409L	1.000	144	0%	73	56.2%	0	-	benign(0.023)	tolerated(0.14)	neutral(0.251)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
CYFIP2	26999	genome.wustl.edu	37	5	156750959	156750959	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037332.2	+1	validated	p.L568F	1.000	91	0%	75	40%	2	50%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_FragX_IP
ADAM19	8728	genome.wustl.edu	37	5	156915472	156915472	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033274.2	-1	reviewed	p.R784Q	0.943	13	0.000	9	0.556	1	0%	possibly_damaging(0.781)	tolerated(0.46)	neutral(0.304)	NULL
ADAM19	8728	genome.wustl.edu	37	5	156916128	156916128	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033274.2	-1	reviewed	p.T769	0.000	54	0%	35	37.1%	2	50%	-	-	-	NULL
ADAM19	8728	genome.wustl.edu	37	5	156918708	156918708	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033274.2	-1	reviewed	p.C670	1.000	15	0%	18	55.6%	1	0%	-	-	-	PatternScan_EGF_2,HMMPfam_EGF_2
SOX30	11063	genome.wustl.edu	37	5	157065357	157065357	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178424.1	-1	reviewed	p.P587	1.000	89	0%	31	45.2%	0	-	-	-	-	NULL
SOX30	11063	genome.wustl.edu	37	5	157065484	157065484	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178424.1	-1	reviewed	p.R545M	0.988	74	0%	42	45.2%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
CLINT1	9685	genome.wustl.edu	37	5	157240152	157240152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014666.2	-1	validated	p.R146C	1.000	398	0.3%	196	43.4%	57	40.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ENTH/VHS domain,HMMSmart_SM00273
EBF1	1879	genome.wustl.edu	37	5	158250203	158250203	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024007.3	-1	validated	p.T253	1.000	100	0%	36	41.7%	3	33.3%	-	-	-	NULL
EBF1	1879	genome.wustl.edu	37	5	158523397	158523397	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024007.3	-1	validated	p.K103	1.000	133	0%	115	40.9%	2	50%	-	-	-	NULL
RNF145	153830	genome.wustl.edu	37	5	158601111	158601111	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144726.1	-1	provisional	p.V254A	1.000	109	0%	39	15.4%	54	40.7%	benign(0.016)	tolerated(0.72)	neutral(0.002)	NULL
ADRA1B	147	genome.wustl.edu	37	5	159344376	159344376	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000679.3	+1	reviewed	p.T155M	1.000	47	0%	47	51.1%	0	-	possibly_damaging(0.637)	tolerated(0.24)	neutral(0.261)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PWWP2A	114825	genome.wustl.edu	37	5	159520902	159520902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130864.1	-1	validated	p.S252N	0.395	257	0%	136	41.9%	13	30.7%	benign(0)	tolerated(0.25)	neutral(0.037)	NULL
C5orf54	63920	genome.wustl.edu	37	5	159821870	159821870	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022090.3	-1	validated	p.L210	0.981	138	0%	62	53.2%	4	75%	-	-	-	NULL
ATP10B	23120	genome.wustl.edu	37	5	160029648	160029648	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025153.2	-1	validated	p.V1100G	1.000	36	0%	20	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GABRB2	2561	genome.wustl.edu	37	5	160886722	160886722	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021911.2	-1	reviewed	p.F122L	1.000	136	0%	56	12.5%	0	-	probably_damaging(0.979)	tolerated(0.45)	neutral(0.434)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
GABRG2	2566	genome.wustl.edu	37	5	161520929	161520929	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198903.2	+1	reviewed	p.V68A	1.000	424	0%	81	9.9%	0	-	benign(0)	tolerated(0.42)	neutral(0.014)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
GABRG2	2566	genome.wustl.edu	37	5	161524669	161524669	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198903.2	+1	reviewed	p.A118V	1.000	160	0%	27	63%	0	-	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
CCNG1	900	genome.wustl.edu	37	5	162869126	162869126	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004060.3	+1	reviewed	p.E225K	1.000	313	0%	172	42.4%	69	50.7%	benign(0.001)	tolerated(0.82)	neutral(0.001)	NULL
HMMR	3161	genome.wustl.edu	37	5	162898375	162898375	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142556.1	+1	reviewed	p.M186V	0.004	188	0%	86	12.8%	7	0%	benign(0)	tolerated(0.29)	neutral(0.029)	NULL
ODZ2	57451	genome.wustl.edu	37	5	166802254	166802254	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122679.1	+1	inferred	p.R93Q	1.000	48	0%	27	48.1%	0	-	possibly_damaging(0.689)	tolerated(0.53)	neutral(0.254)	HMMPfam_Ten_N
ODZ2	57451	genome.wustl.edu	37	5	167303060	167303060	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122679.1	+1	inferred	p.P191H	1.000	169	0%	78	39.7%	0	-	benign(0.01)	deleterious(0.03)	neutral(0.365)	HMMPfam_Ten_N
ODZ2	57451	genome.wustl.edu	37	5	167626962	167626962	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122679.1	+1	inferred	p.T1077A	1.000	91	0%	66	21.2%	0	-	benign(0)	tolerated(0.58)	neutral(0.005)	superfamily_Concanavalin A-like lectins/glucanases
ENSG00000233913	0	genome.wustl.edu	37	5	168043771	168043771	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000421908	+1	known	p.R139C	1.000	22	0%	19	47.4%	5	0%	-	-	-	HMMPfam_Ribosomal_L16,superfamily_Ribosomal protein L10e
SLIT3	6586	genome.wustl.edu	37	5	168199840	168199840	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003062.2	-1	validated	p.R469*	1.000	25	0%	21	52.4%	0	-	-	-	-	HMMPfam_LRRCT,HMMSmart_SM00082,superfamily_RNI-like
MIR585	693170	genome.wustl.edu	37	5	168690619	168690619	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384887	-1	known	NULL	0.000	50	0%	32	46.9%	0	-	-	-	-	-
DOCK2	1794	genome.wustl.edu	37	5	169230185	169230185	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004946.2	+1	validated	p.L893S	1.000	83	0%	41	29.3%	3	0%	possibly_damaging(0.928)	deleterious(0)	deleterious(0.820)	NULL
FAM196B	100131897	genome.wustl.edu	37	5	169308421	169308421	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129891.1	-1	predicted	p.D458Y	1.000	90	0%	37	48.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM196B	100131897	genome.wustl.edu	37	5	169310737	169310737	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129891.1	-1	predicted	p.V56I	0.000	101	0%	47	38.3%	0	-	benign(0.099)	tolerated(0.36)	neutral(0.028)	NULL
DOCK2	1794	genome.wustl.edu	37	5	169410118	169410118	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004946.2	+1	validated	p.D949G	1.000	142	0%	55	52.7%	3	0%	possibly_damaging(0.666)	deleterious(0.02)	deleterious(0.619)	NULL
DOCK2	1794	genome.wustl.edu	37	5	169494675	169494675	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004946.2	+1	validated	p.F1543	0.595	112	0%	88	56.8%	2	0%	-	-	-	superfamily_Cytochrome c
DOCK2	1794	genome.wustl.edu	37	5	169506128	169506128	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004946.2	+1	validated	p.A1715V	0.000	59	0%	16	87.5%	8	0%	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
KCNMB1	3779	genome.wustl.edu	37	5	169805857	169805857	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004137.2	-1	reviewed	p.E143K	0.464	68	0%	50	40%	7	0%	possibly_damaging(0.896)	tolerated(0.17)	neutral(0.412)	HMMPfam_CaKB
KCNIP1	30820	genome.wustl.edu	37	5	170160852	170160852	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034837.1	+1	reviewed	p.N196H	1.000	301	0%	142	36.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
FBXW11	23291	genome.wustl.edu	37	5	171337655	171337655	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012300.2	-1	reviewed	p.R98	1.000	191	0%	65	46.2%	18	33.3%	-	-	-	NULL
EFCAB9	285588	genome.wustl.edu	37	5	171626473	171626473	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398186	+1	known	p.A75T	0.007	59	0%	33	51.5%	0	-	probably_damaging(0.99)	tolerated(0.11)	deleterious(0.713)	superfamily_SSF47473
RPL26L1	51121	genome.wustl.edu	37	5	172395553	172395553	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016093.2	+1	reviewed	p.R87H	1.000	85	0%	43	46.5%	112	38.3%	benign(0.394)	deleterious(0.02)	deleterious(0.510)	superfamily_Translation proteins SH3-like domain
CREBRF	153222	genome.wustl.edu	37	5	172550138	172550138	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153607.2	+1	validated	p.Q579	1.000	197	0%	87	40.2%	1	0%	-	-	-	NULL
BNIP1	662	genome.wustl.edu	37	5	172573933	172573933	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013979.2	+1	reviewed	p.K50T	1.000	109	0%	62	51.6%	13	69.2%	benign(0.015)	tolerated(0.13)	neutral(0.253)	NULL
BNIP1	662	genome.wustl.edu	37	5	172590872	172590872	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013979.2	+1	reviewed	p.F255S	0.998	160	0%	97	47.4%	13	61.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sec20
CPEB4	80315	genome.wustl.edu	37	5	173317477	173317477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030627.2	+1	validated	p.Q247H	1.000	131	0%	105	10.5%	5	40%	possibly_damaging(0.859)	deleterious(0.03)	deleterious(0.697)	NULL
CPEB4	80315	genome.wustl.edu	37	5	173317792	173317792	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030627.2	+1	validated	p.S352R	1.000	48	0%	36	41.7%	3	33.3%	benign(0.273)	deleterious(0.02)	neutral(0.412)	NULL
THOC3	84321	genome.wustl.edu	37	5	175391978	175391978	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032361.2	-1	validated	p.G202D	1.000	257	0%	203	23.6%	71	36.6%	possibly_damaging(0.937)	deleterious(0.01)	deleterious(0.788)	superfamily_WD40_like
C5orf25	375484	genome.wustl.edu	37	5	175763861	175763861	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198567.4	+1	validated	p.T336	0.011	115	0%	68	32.4%	12	41.6%	-	-	-	NULL
C5orf25	375484	genome.wustl.edu	37	5	175772311	175772311	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198567.4	+1	validated	p.R413C	0.374	61	0%	44	13.6%	15	13.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAF2	23197	genome.wustl.edu	37	5	175927110	175927110	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014613.2	+1	reviewed	p.R373Q	1.000	106	2.8%	61	45.9%	21	52.3%	probably_damaging(0.997)	tolerated(0.11)	deleterious(0.738)	HMMPfam_UBX,superfamily_SSF54236
FAF2	23197	genome.wustl.edu	37	5	175933841	175933841	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014613.2	+1	reviewed	p.R410*	1.000	143	0%	94	13.8%	22	4.5%	-	-	-	HMMPfam_UBX,superfamily_SSF54236
RNF44	22838	genome.wustl.edu	37	5	175956357	175956357	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014901.4	-1	reviewed	p.R390W	0.981	19	0%	14	64.3%	69	46.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
CDHR2	54825	genome.wustl.edu	37	5	175995804	175995804	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017675.4	+1	reviewed	p.A84T	0.000	19	0%	24	41.7%	0	-	benign(0.001)	tolerated(0.11)	neutral(0.272)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDHR2	54825	genome.wustl.edu	37	5	176005439	176005439	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017675.4	+1	reviewed	p.S550G	0.060	14	0%	16	43.8%	0	-	benign(0.025)	tolerated(0.5)	neutral(0.011)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDHR2	54825	genome.wustl.edu	37	5	176011689	176011689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017675.4	+1	reviewed	p.D803N	0.973	16	0%	18	55.6%	0	-	probably_damaging(1)	tolerated(0.67)	deleterious(0.502)	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
CDHR2	54825	genome.wustl.edu	37	5	176018285	176018285	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017675.4	+1	reviewed	p.A1205V	0.000	21	0%	31	51.6%	0	-	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
GPRIN1	114787	genome.wustl.edu	37	5	176025294	176025294	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052899.2	-1	validated	p.A514	0.003	35	0%	26	30.8%	4	25%	-	-	-	NULL
TSPAN17	26262	genome.wustl.edu	37	5	176078758	176078758	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012171.1	+1	validated	p.V48I	0.997	57	0%	72	45.8%	52	36.5%	probably_damaging(0.955)	tolerated(0.32)	neutral(0.423)	HMMPfam_Tetraspannin
UNC5A	90249	genome.wustl.edu	37	5	176295178	176295178	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133369.2	+1	validated	p.E114K	1.000	34	0%	42	50%	1	0%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	superfamily_SSF48726
HK3	3101	genome.wustl.edu	37	5	176308847	176308847	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002115.2	-1	reviewed	p.F747L	1.000	50	0%	29	41.4%	3	0%	possibly_damaging(0.929)	deleterious(0.01)	deleterious(0.782)	HMMPfam_Hexokinase_2,superfamily_SSF53067
HK3	3101	genome.wustl.edu	37	5	176309033	176309033	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002115.2	-1	reviewed	p.A717T	1.000	9	0.000	11	0.545	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hexokinase_2,superfamily_SSF53067
UIMC1	51720	genome.wustl.edu	37	5	176370441	176370441	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016290.3	-1	provisional	p.S498A	0.007	217	0%	104	19.2%	32	25%	probably_damaging(0.963)	tolerated(0.13)	deleterious(0.658)	NULL
LOC100289405	100289405	genome.wustl.edu	37	5	176524551	176524551	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342584.1	-1	model	p.E52K	0.996	26	0%	32	50%	21	28.5%	-	-	-	NULL
NSD1	64324	genome.wustl.edu	37	5	176637237	176637237	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022455.4	+1	reviewed	p.L613M	0.000	77	0%	43	27.9%	9	22.2%	possibly_damaging(0.837)	tolerated(0.2)	neutral(0.368)	NULL
NSD1	64324	genome.wustl.edu	37	5	176684042	176684042	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022455.4	+1	reviewed	p.C1619Y	1.000	185	0%	108	38.9%	10	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00249
NSD1	64324	genome.wustl.edu	37	5	176709530	176709530	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022455.4	+1	reviewed	p.R1986H	1.000	437	0%	210	47.6%	9	55.5%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
LMAN2	10960	genome.wustl.edu	37	5	176761322	176761322	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006816.2	-1	reviewed	p.K291N	1.000	13	0%	23	43.5%	241	39%	benign(0.038)	deleterious(0.02)	neutral(0.385)	NULL
SLC34A1	6569	genome.wustl.edu	37	5	176825280	176825280	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003052.4	+1	reviewed	p.R638H	0.674	6	0.000	6	0.833	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DBN1	1627	genome.wustl.edu	37	5	176887474	176887474	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080881.2	-1	reviewed	p.A307V	0.054	44	2.3%	47	48.9%	308	41.2%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
PDLIM7	9260	genome.wustl.edu	37	5	176910891	176910891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005451.3	-1	reviewed	p.H422Y	1.000	9	0.000	15	0.467	148	23.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
LOC202181	202181	genome.wustl.edu	37	5	177054582	177054582	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026921.1	-1	predicted	NULL	1.000	140	0.7%	58	41.4%	1	0%	-	-	-	-
ZNF354A	6940	genome.wustl.edu	37	5	178139424	178139424	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005649.2	-1	validated	p.Q485H	1.000	330	0%	167	44.3%	17	52.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP2	80108	genome.wustl.edu	37	5	178358467	178358467	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030613.2	+1	provisional	p.F51	0.338	225	0%	101	34.7%	0	-	-	-	-	NULL
ZFP2	80108	genome.wustl.edu	37	5	178358763	178358763	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030613.2	+1	provisional	p.R150I	1.000	117	0%	54	50%	0	-	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000249299	0	genome.wustl.edu	37	5	178359763	178359763	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000503510	-1	novel	NULL	0.000	41	0%	26	15.4%	0	-	-	-	-	-
ZNF879	345462	genome.wustl.edu	37	5	178459871	178459871	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136116.1	+1	provisional	p.R308*	0.971	85	0%	37	37.8%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF879	345462	genome.wustl.edu	37	5	178460353	178460353	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136116.1	+1	provisional	p.H468Q	0.589	220	0%	80	37.5%	0	-	benign(0.103)	tolerated(0.3)	neutral(0.037)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF354C	30832	genome.wustl.edu	37	5	178506945	178506945	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014594.1	+1	provisional	p.A504	0.677	219	0%	94	44.7%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ADAMTS2	9509	genome.wustl.edu	37	5	178541161	178541161	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014244.2	-1	reviewed	p.D1115N	0.994	115	0%	95	35.8%	4	0%	benign(0.103)	tolerated(0.41)	neutral(0.023)	NULL
ADAMTS2	9509	genome.wustl.edu	37	5	178562923	178562923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014244.2	-1	reviewed	p.R691H	1.000	11	0%	15	53.3%	7	0%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	NULL
MGAT4B	11282	genome.wustl.edu	37	5	179226010	179226010	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_054013.3	-1	reviewed	p.R436C	1.000	31	0%	24	45.8%	185	48.1%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
TBC1D9B	23061	genome.wustl.edu	37	5	179306112	179306112	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198868.2	-1	validated	p.T501M	0.997	12	0%	13	53.8%	59	49.1%	possibly_damaging(0.948)	tolerated(0.07)	deleterious(0.710)	superfamily_Ypt/Rab-GAP domain of gyp1p
MIR340	442908	genome.wustl.edu	37	5	179442352	179442352	+	RNA	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000362125	-1	known	NULL	0.889	205	0%	122	41.8%	0	-	-	-	-	-
MAPK9	5601	genome.wustl.edu	37	5	179663388	179663388	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002752.4	-1	reviewed	p.R424Q	1.000	84	0%	53	34%	27	59.2%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	NULL
MAPK9	5601	genome.wustl.edu	37	5	179688809	179688809	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002752.4	-1	reviewed	p.E109K	1.000	214	0%	104	38.5%	19	42.1%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
GFPT2	9945	genome.wustl.edu	37	5	179755307	179755307	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005110.2	-1	provisional	p.V189D	1.000	149	0%	106	53.8%	0	-	benign(0.067)	tolerated(0.2)	neutral(0.053)	HMMPfam_GATase_2,superfamily_SSF56235
CNOT6	57472	genome.wustl.edu	37	5	179994143	179994143	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015455.3	+1	reviewed	p.G258V	1.000	331	0%	143	35%	19	36.8%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	HMMPfam_Exo_endo_phos,superfamily_DNase I-like
FLT4	2324	genome.wustl.edu	37	5	180057234	180057234	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182925.4	-1	reviewed	p.T168	0.264	20	0%	24	45.8%	0	-	-	-	-	superfamily_Immunoglobulin
FLT4	2324	genome.wustl.edu	37	5	180057258	180057258	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182925.4	-1	reviewed	p.V160	1.000	25	0%	34	41.2%	1	0%	-	-	-	superfamily_Immunoglobulin
FLT4	2324	genome.wustl.edu	37	5	180057690	180057690	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182925.4	-1	reviewed	p.A89T	0.000	45	0%	33	12.1%	2	0%	benign(0)	tolerated(0.82)	neutral(0.001)	HMMSmart_SM00409,superfamily_Immunoglobulin
OR2V1	26693	genome.wustl.edu	37	5	180551489	180551489	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000329365	-1	known	p.D272E	1.000	21	0%	18	33.3%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_7tm_1,superfamily_SSF81321
EXOC2	55770	genome.wustl.edu	37	6	532576	532576	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018303.4	-1	reviewed	p.R758I	1.000	257	0%	129	34.1%	19	36.8%	benign(0.403)	tolerated(0.15)	neutral(0.370)	NULL
MYLK4	340156	genome.wustl.edu	37	6	2749475	2749475	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012418.3	-1	validated	p.Q18	0.002	348	0%	165	42.4%	1	0%	-	-	-	NULL
WRNIP1	56897	genome.wustl.edu	37	6	2768962	2768962	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020135.2	+1	reviewed	p.K287T	0.998	171	0%	130	41.5%	60	36.6%	benign(0.065)	tolerated(0.14)	neutral(0.254)	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
SERPINB9	5272	genome.wustl.edu	37	6	2890485	2890485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004155.4	-1	validated	p.R348M	0.006	32	0%	39	53.8%	59	38.9%	benign(0.008)	tolerated(0.05)	neutral(0.345)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
RIPK1	8737	genome.wustl.edu	37	6	3113487	3113487	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003804.3	+1	validated	p.A644T	0.997	52	0%	44	36.4%	7	28.5%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	HMMPfam_Death,HMMSmart_SM00005,superfamily_DEATH domain
PSMG4	389362	genome.wustl.edu	37	6	3263966	3263966	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128592.1	+1	validated	p.T75A	0.775	45	0%	51	35.3%	49	20.4%	benign(0.044)	tolerated(0.16)	neutral(0.062)	NULL
PXDC1	221749	genome.wustl.edu	37	6	3738329	3738329	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380277	-1	known	p.W51*	1.000	173	0%	165	46.1%	18	44.4%	possibly_damaging(0.942)	tolerated(0.1)	deleterious(0.673)	superfamily_PX domain
FAM217A	222826	genome.wustl.edu	37	6	4069988	4069988	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173563.1	-1	predicted	p.D157Y	1.000	263	0.4%	195	43.1%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
CDYL	9425	genome.wustl.edu	37	6	4892427	4892427	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004824.3	+1	reviewed	p.V169I	0.000	32	0%	39	38.5%	18	38.8%	benign(0)	tolerated(1)	-	NULL
LYRM4	57128	genome.wustl.edu	37	6	5216963	5216963	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020408.4	-1	validated	p.A32D	1.000	633	0%	363	41%	30	30%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Complex1_LYR
F13A1	2162	genome.wustl.edu	37	6	6225075	6225075	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000129.3	-1	reviewed	p.E273K	0.864	44	0%	22	63.6%	1	0%	benign(0.001)	tolerated(0.2)	neutral(0.049)	superfamily_SSF54001
CAGE1	285782	genome.wustl.edu	37	6	7365777	7365777	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205864.2	-1	validated	p.S543I	0.000	385	0%	146	45.2%	0	-	possibly_damaging(0.681)	deleterious(0.04)	deleterious(0.592)	NULL
CAGE1	285782	genome.wustl.edu	37	6	7373437	7373437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205864.2	-1	validated	p.E403K	0.000	717	0%	345	48.7%	0	-	possibly_damaging(0.478)	tolerated(0.32)	neutral(0.182)	NULL
CAGE1	285782	genome.wustl.edu	37	6	7374002	7374002	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205864.2	-1	validated	p.F214L	0.000	419	0%	209	43.1%	0	-	benign(0.15)	tolerated(0.99)	neutral(0.013)	NULL
DSP	1832	genome.wustl.edu	37	6	7562982	7562982	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004415.2	+1	reviewed	p.R232H	1.000	74	0%	75	48%	49	40.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00150,superfamily_Spectrin repeat
DSP	1832	genome.wustl.edu	37	6	7563982	7563982	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004415.2	+1	reviewed	p.A247V	0.995	457	0%	254	43.7%	40	55%	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	HMMSmart_SM00150,superfamily_Spectrin repeat
DSP	1832	genome.wustl.edu	37	6	7568713	7568713	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004415.2	+1	reviewed	p.N437S	1.000	176	0%	100	42%	40	52.5%	benign(0)	tolerated(0.34)	neutral(0.023)	superfamily_Spectrin repeat
BMP6	654	genome.wustl.edu	37	6	7861758	7861758	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001718.4	+1	reviewed	p.T311M	0.999	106	0%	81	12.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TGFb_propeptide
TXNDC5	81567	genome.wustl.edu	37	6	7889769	7889769	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030810.2	-1	reviewed	p.R260C	1.000	106	0.9%	74	47.3%	111	46.8%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin
SLC35B3	51000	genome.wustl.edu	37	6	8417203	8417203	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142540.1	-1	validated	p.A300V	1.000	186	0%	65	29.2%	13	38.4%	benign(0.001)	tolerated(0.95)	-	HMMPfam_UAA,superfamily_Multidrug resistance efflux transporter EmrE
SLC35B3	51000	genome.wustl.edu	37	6	8435591	8435591	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000426876	-1	known	p.T18A	0.001	4	0.000	5	0.800	20	45%	unknown(0)	-	-	NULL
TFAP2A	7020	genome.wustl.edu	37	6	10398805	10398805	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003220.2	-1	reviewed	p.G387S	1.000	59	0%	59	47.5%	66	57.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TF_AP-2
TFAP2A	7020	genome.wustl.edu	37	6	10410257	10410257	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000488193	-1	known	p.G74R	1.000	7	0.000	13	0.462	55	47.2%	unknown(0)	deleterious(0)	-	NULL
TFAP2A	7020	genome.wustl.edu	37	6	10419655	10419655	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042425.1	-1	reviewed	p.W10L	1.000	22	0%	30	50%	6	16.6%	benign(0.001)	tolerated(0.45)	neutral(0.012)	NULL
GCNT2	2651	genome.wustl.edu	37	6	10586509	10586509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145655.3	+1	reviewed	p.P96H	1.000	131	0%	79	15.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TMEM14B	81853	genome.wustl.edu	37	6	10755514	10755514	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000475942	+1	known	p.L114	0.000	293	0%	190	35.8%	1	0%	-	-	-	NULL
SYCP2L	221711	genome.wustl.edu	37	6	10924805	10924805	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040274.2	+1	validated	p.I383	0.671	370	0%	166	38%	0	-	-	-	-	NULL
SYCP2L	221711	genome.wustl.edu	37	6	10930619	10930619	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040274.2	+1	validated	p.K502T	0.982	290	0%	132	50%	0	-	benign(0)	tolerated(0.1)	neutral(0.286)	NULL
ERVFRD-1	405754	genome.wustl.edu	37	6	11103941	11103941	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207582.2	-1	validated	p.E535*	0.094	73	0%	50	28%	0	-	-	-	-	NULL
ERVFRD-1	405754	genome.wustl.edu	37	6	11104655	11104655	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207582.2	-1	validated	p.A297S	0.747	102	0%	50	14%	0	-	possibly_damaging(0.794)	tolerated(0.14)	deleterious(0.547)	HMMPfam_TLV_coat
NEDD9	4739	genome.wustl.edu	37	6	11213561	11213561	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142393.1	-1	validated	p.V138L	0.031	178	0%	101	38.6%	23	34.7%	benign(0.001)	tolerated(1)	-	NULL
NEDD9	4739	genome.wustl.edu	37	6	11213813	11213813	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142393.1	-1	validated	p.I54V	1.000	49	0%	50	60%	52	40.3%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
HIVEP1	3096	genome.wustl.edu	37	6	12120560	12120560	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002114.2	+1	validated	p.E178K	0.974	114	0%	66	40.9%	4	25%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	NULL
PHACTR1	221692	genome.wustl.edu	37	6	13182840	13182840	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030948.1	+1	validated	p.E196K	1.000	63	0%	60	60%	1	0%	possibly_damaging(0.882)	tolerated(0.4)	neutral(0.360)	NULL
TBC1D7	51256	genome.wustl.edu	37	6	13305376	13305376	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143964.1	-1	validated	p.D280G	1.000	40	0%	25	60%	34	55.8%	possibly_damaging(0.92)	deleterious(0.01)	deleterious(0.776)	superfamily_Ypt/Rab-GAP domain of gyp1p
JARID2	3720	genome.wustl.edu	37	6	15501283	15501283	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004973.2	+1	reviewed	p.L697	1.000	10	0%	22	45.5%	15	60%	-	-	-	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like
GMPR	2766	genome.wustl.edu	37	6	16274681	16274681	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006877.3	+1	reviewed	p.E167	1.000	310	0%	211	40.3%	21	33.3%	-	-	-	HMMPfam_IMPDH,superfamily_SSF51412
ATXN1	6310	genome.wustl.edu	37	6	16326932	16326932	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000332.3	-1	reviewed	p.A537D	1.000	36	0%	42	33.3%	5	20%	benign(0.071)	deleterious(0.04)	neutral(0.354)	NULL
CAP2	10486	genome.wustl.edu	37	6	17507510	17507510	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006366.2	+1	reviewed	p.S137	0.991	93	0%	53	66%	16	81.2%	-	-	-	HMMPfam_CAP_N,superfamily_N-terminal domain of adenylylcyclase associated protein CAP
CAP2	10486	genome.wustl.edu	37	6	17551811	17551811	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006366.2	+1	reviewed	p.I442M	0.851	213	0%	105	37.1%	19	52.6%	possibly_damaging(0.878)	deleterious(0)	deleterious(0.786)	HMMPfam_CAP_C,superfamily_C-terminal domain of adenylylcyclase associated protein
NUP153	9972	genome.wustl.edu	37	6	17669569	17669569	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005124.2	-1	reviewed	e7-1	1.000	224	0%	97	45.4%	0	-	-	-	-	-
KIF13A	63971	genome.wustl.edu	37	6	17805745	17805745	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022113.4	-1	validated	p.M755I	1.000	428	0%	208	44.7%	1	0%	possibly_damaging(0.902)	deleterious(0.02)	deleterious(0.740)	NULL
TPMT	7172	genome.wustl.edu	37	6	18134087	18134087	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000367.2	-1	reviewed	p.K176N	0.000	204	0%	115	54.8%	25	24%	benign(0.021)	tolerated(0.51)	neutral(0.010)	HMMPfam_TPMT,superfamily_SSF53335
DEK	7913	genome.wustl.edu	37	6	18236743	18236743	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003472.3	-1	reviewed	p.I329M	0.811	595	0%	217	53.5%	42	50%	benign(0.099)	deleterious(0)	neutral(0.452)	HMMPfam_DEK_C,superfamily_DEK C-terminal domain
CDKAL1	54901	genome.wustl.edu	37	6	20955720	20955720	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017774.3	+1	reviewed	p.L271	1.000	112	0%	56	44.6%	13	53.8%	-	-	-	HMMSmart_SM00729,HMMPfam_Radical_SAM,superfamily_Radical SAM enzymes
HDGFL1	154150	genome.wustl.edu	37	6	22569836	22569836	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138574.2	+1	provisional	p.S11N	0.000	18	0%	20	30%	0	-	benign(0.123)	tolerated(0.14)	neutral(0.260)	HMMPfam_PWWP,HMMSmart_PWWP,superfamily_SSF63748
HDGFL1	154150	genome.wustl.edu	37	6	22569890	22569890	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138574.2	+1	provisional	p.I29T	0.016	30	0%	29	17.2%	0	-	possibly_damaging(0.931)	deleterious(0)	deleterious(0.822)	HMMPfam_PWWP,HMMSmart_PWWP,superfamily_SSF63748
HDGFL1	154150	genome.wustl.edu	37	6	22569907	22569907	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138574.2	+1	provisional	p.P35S	0.020	29	0%	31	51.6%	0	-	possibly_damaging(0.706)	tolerated(0.1)	deleterious(0.540)	HMMPfam_PWWP,HMMSmart_PWWP,superfamily_SSF63748
GPLD1	2822	genome.wustl.edu	37	6	24454305	24454305	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001503.2	-1	reviewed	p.G425C	0.997	34	2.9%	36	55.6%	0	-	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
C6orf62	81688	genome.wustl.edu	37	6	24718811	24718811	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030939.4	-1	validated	p.Q29R	1.000	295	0%	215	32.6%	45	26.6%	possibly_damaging(0.776)	tolerated(0.09)	deleterious(0.586)	NULL
GMNN	51053	genome.wustl.edu	37	6	24785876	24785876	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015895.3	+1	validated	p.G160D	0.000	210	0%	66	36.4%	30	40%	benign(0.182)	tolerated(0.35)	neutral(0.037)	HMMPfam_Geminin
FAM65B	9750	genome.wustl.edu	37	6	24848299	24848299	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014722.2	-1	validated	p.S344I	1.000	114	0%	77	54.5%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
FAM65B	9750	genome.wustl.edu	37	6	24850926	24850926	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014722.2	-1	validated	p.R233W	0.996	136	1.5%	97	50.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LRRC16A	55604	genome.wustl.edu	37	6	25471446	25471446	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017640.5	+1	validated	p.R247Q	1.000	304	0%	174	48.3%	6	16.6%	possibly_damaging(0.892)	tolerated(0.28)	neutral(0.383)	superfamily_SSF52047
SCGN	10590	genome.wustl.edu	37	6	25670236	25670236	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006998.3	+1	reviewed	p.R135*	1.000	234	0%	156	10.9%	0	-	-	-	-	HMMSmart_SM00054,HMMPfam_efhand,superfamily_EF-hand
HIST1H2AA	221613	genome.wustl.edu	37	6	25726566	25726566	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170745.3	-1	reviewed	p.L64I	0.990	230	0%	190	49.5%	0	-	benign(0.414)	deleterious(0)	deleterious(0.579)	HMMSmart_H2A,HMMPfam_Histone,superfamily_Histone-fold
SLC17A1	6568	genome.wustl.edu	37	6	25819302	25819302	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005074.3	-1	validated	p.I204V	1.000	109	0%	52	36.5%	0	-	benign(0.308)	tolerated(0.07)	neutral(0.415)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SLC17A3	10786	genome.wustl.edu	37	6	25850091	25850091	+	Missense_Mutation	SNP	C	C	T	rs145343915	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098486.1	-1	validated	p.G405R	0.011	57	0%	23	52.2%	0	-	probably_damaging(0.987)	deleterious(0.02)	deleterious(0.820)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
TRIM38	10475	genome.wustl.edu	37	6	25983486	25983486	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006355.2	+1	reviewed	p.Q323H	0.000	101	0%	51	47.1%	16	43.7%	benign(0.382)	tolerated(0.29)	neutral(0.151)	HMMSmart_PRY
HIST1H1T	3010	genome.wustl.edu	37	6	26107819	26107819	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005323.3	-1	reviewed	p.R168I	0.570	272	0%	167	43.1%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
HIST1H4D	8360	genome.wustl.edu	37	6	26189066	26189066	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003539.3	-1	reviewed	p.K80R	1.000	52	0%	44	43.2%	10	60%	benign(0.033)	deleterious(0)	neutral(0.446)	HMMSmart_SM00417,HMMSmart_SM00803,HMMPfam_Histone,superfamily_Histone-fold
HIST1H3E	8353	genome.wustl.edu	37	6	26225768	26225768	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003532.2	+1	reviewed	p.R129H	1.000	50	0%	47	44.7%	10	30%	probably_damaging(0.999)	-	-	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold
BTN3A2	11118	genome.wustl.edu	37	6	26373141	26373141	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007047.3	+1	reviewed	p.S244	0.000	35	0%	34	44.1%	8	50%	-	-	-	NULL
BTN2A1	11120	genome.wustl.edu	37	6	26468546	26468546	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007049.2	+1	reviewed	p.G451	0.027	142	0%	121	44.6%	19	21%	-	-	-	HMMPfam_SPRY,HMMSmart_SM00449
BTN2A1	11120	genome.wustl.edu	37	6	26468695	26468695	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007049.2	+1	reviewed	p.P501L	0.041	41	0%	51	54.9%	36	44.4%	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	HMMPfam_SPRY,HMMSmart_SM00449
BTN1A1	696	genome.wustl.edu	37	6	26509198	26509198	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001732.2	+1	validated	p.F459L	1.000	72	0%	48	45.8%	0	-	possibly_damaging(0.78)	deleterious(0.02)	deleterious(0.674)	HMMPfam_SPRY,HMMSmart_SM00449
ABT1	29777	genome.wustl.edu	37	6	26598749	26598749	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013375.2	+1	reviewed	p.E232A	0.968	5	0.000	7	0.857	66	51.5%	benign(0.03)	tolerated(0.5)	neutral(0.011)	NULL
HIST1H2AG	8969	genome.wustl.edu	37	6	27101186	27101186	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021064.4	+1	reviewed	p.I112M	1.000	46	0%	47	46.8%	23	34.7%	possibly_damaging(0.524)	deleterious(0)	deleterious(0.621)	HMMSmart_SM00414,superfamily_Histone-fold
PRSS16	10279	genome.wustl.edu	37	6	27215676	27215676	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005865.3	+1	reviewed	p.R29H	0.687	37	0%	35	31.4%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
PRSS16	10279	genome.wustl.edu	37	6	27222516	27222516	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005865.3	+1	reviewed	p.A399T	0.482	38	0%	30	40%	10	50%	benign(0.001)	tolerated(0.64)	neutral(0.003)	HMMPfam_Peptidase_S28,superfamily_SSF53474
POM121L2	94026	genome.wustl.edu	37	6	27277047	27277047	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444565	-1	known	p.P968L	0.921	70	0%	72	58.3%	0	-	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	NULL
POM121L2	94026	genome.wustl.edu	37	6	27278433	27278433	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444565	-1	known	p.S506N	0.027	42	0%	65	46.2%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
ZNF391	346157	genome.wustl.edu	37	6	27369095	27369095	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076781.1	+1	validated	p.R316*	0.000	136	0%	85	56.5%	4	75%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZSCAN16	80345	genome.wustl.edu	37	6	28097710	28097710	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025231.1	+1	provisional	p.T343	0.002	201	0%	63	49.2%	4	75%	-	-	-	superfamily_SSF57667
ZNF193	7746	genome.wustl.edu	37	6	28200494	28200495	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006299.3	+1	provisional	p.R243fs	0.000:0.000	-	-	-	-	-	-	-	-	-	NULL
ZKSCAN4	387032	genome.wustl.edu	37	6	28219360	28219360	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019110.3	-1	provisional	p.R133	1.000	48	0%	37	48.6%	6	50%	-	-	-	HMMPfam_SCAN,HMMSmart_SCAN
ZNF187	7741	genome.wustl.edu	37	6	28244595	28244595	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152736.4	+1	validated	p.I253L	0.987	231	0%	132	37.1%	12	33.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
PGBD1	84547	genome.wustl.edu	37	6	28251727	28251727	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032507.3	+1	reviewed	p.R46H	0.448	23	0%	32	53.1%	4	25%	possibly_damaging(0.756)	tolerated(0.22)	neutral(0.321)	HMMPfam_SCAN,HMMSmart_SCAN
PGBD1	84547	genome.wustl.edu	37	6	28268709	28268709	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032507.3	+1	reviewed	p.S360A	1.000	88	0%	43	39.5%	3	33.3%	possibly_damaging(0.764)	tolerated(0.14)	deleterious(0.533)	NULL
ZSCAN12	9753	genome.wustl.edu	37	6	28360774	28360774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000361028	-1	known	p.R151H	0.001	274	0%	111	53.2%	0	-	benign(0.001)	tolerated(0.7)	neutral(0.002)	HMMSmart_SCAN
ZSCAN23	222696	genome.wustl.edu	37	6	28402617	28402617	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012455.1	-1	validated	p.I265	0.000	115	0%	61	55.7%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZSCAN23	222696	genome.wustl.edu	37	6	28403738	28403738	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012455.1	-1	validated	p.E102	0.094	81	0%	51	29.4%	0	-	-	-	-	HMMPfam_SCAN,HMMSmart_SCAN
SCAND3	114821	genome.wustl.edu	37	6	28539888	28539888	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052923.1	-1	provisional	p.L1260F	1.000	162	0%	68	36.8%	1	0%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	HMMPfam_hATC
SCAND3	114821	genome.wustl.edu	37	6	28541334	28541334	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052923.1	-1	provisional	p.R778*	1.000	352	0.3%	119	35.3%	2	0%	-	-	-	NULL
SCAND3	114821	genome.wustl.edu	37	6	28554157	28554157	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052923.1	-1	provisional	p.R113Q	0.992	85	0%	70	55.7%	0	-	possibly_damaging(0.513)	tolerated(0.28)	neutral(0.204)	HMMPfam_SCAN,HMMSmart_SCAN
SCAND3	114821	genome.wustl.edu	37	6	28554309	28554309	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052923.1	-1	provisional	p.E62D	1.000	127	0%	108	43.5%	0	-	benign(0.057)	tolerated(0.15)	neutral(0.244)	HMMPfam_SCAN,HMMSmart_SCAN
OR2J1	442185	genome.wustl.edu	37	6	29068859	29068859	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377171	+1	known	p.I47T	0.033	56	0%	19	57.9%	0	-	benign(0.028)	deleterious(0)	neutral(0.446)	HMMPfam_7tm_1,superfamily_SSF81321
OR2J3	442186	genome.wustl.edu	37	6	29080191	29080191	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005216.2	+1	validated	p.R175H	0.000	46	0%	22	54.5%	0	-	benign(0.007)	tolerated(0.35)	neutral(0.021)	HMMPfam_7tm_1,superfamily_SSF81321
OR5V1	81696	genome.wustl.edu	37	6	29323961	29323961	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030876.5	-1	validated	p.K4N	0.020	120	0%	61	42.6%	0	-	benign(0.282)	tolerated(0.43)	neutral(0.100)	superfamily_Family A G protein-coupled receptor-like
GABBR1	2550	genome.wustl.edu	37	6	29580347	29580347	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001470.2	-1	reviewed	p.T537	0.966	38	0%	32	50%	14	71.4%	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
RPP21	79897	genome.wustl.edu	37	6	30314223	30314223	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024839.1	+1	provisional	p.R86C	1.000	24	0%	28	35.7%	215	53%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Rpr2
HLA-E	3133	genome.wustl.edu	37	6	30457513	30457513	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005516.4	+1	reviewed	p.S25	0.963	7	0.000	11	0.455	132	18.1%	-	-	-	HMMPfam_MHC_I,superfamily_MHC_I/II-like_Ag-recog
GNL1	2794	genome.wustl.edu	37	6	30513952	30513952	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005275.3	-1	validated	p.A574V	0.995	47	0%	33	36.4%	71	59.1%	probably_damaging(0.979)	tolerated(0.08)	deleterious(0.722)	NULL
ABCF1	23	genome.wustl.edu	37	6	30557622	30557622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025091.1	+1	reviewed	p.R702C	1.000	56	0%	51	47.1%	81	44.4%	possibly_damaging(0.598)	deleterious(0.02)	deleterious(0.590)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
PPP1R10	5514	genome.wustl.edu	37	6	30571284	30571284	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002714.2	-1	reviewed	p.G578S	0.889	15	0%	15	53.3%	35	68.5%	benign(0.002)	tolerated(0.06)	neutral(0.323)	NULL
ATAT1	79969	genome.wustl.edu	37	6	30594987	30594987	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000330083	+1	known	p.L3	0.000	132	0%	113	32.7%	2	100%	-	-	-	NULL
ATAT1	79969	genome.wustl.edu	37	6	30610015	30610015	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024909.2	+1	validated	p.D239N	1.000	36	0%	27	29.6%	25	48%	possibly_damaging(0.753)	deleterious(0.01)	deleterious(0.682)	NULL
C6orf136	221545	genome.wustl.edu	37	6	30619191	30619191	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109938.2	+1	validated	p.V238I	0.084	28	0%	34	38.2%	42	45.2%	benign(0.001)	tolerated(0.47)	neutral(0.011)	HMMPfam_DUF2358
DHX16	8449	genome.wustl.edu	37	6	30632990	30632990	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003587.4	-1	reviewed	p.R328H	1.000	14	0%	19	42.1%	17	47%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MDC1	9656	genome.wustl.edu	37	6	30672364	30672364	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000420817	-1	known	p.P180L	0.001	81	0%	95	37.9%	28	42.8%	-	-	-	NULL
VARS2	57176	genome.wustl.edu	37	6	30882985	30882985	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020442.4	+1	validated	p.E85A	0.990	97	0%	76	38.2%	11	36.3%	benign(0.106)	tolerated(0.54)	neutral(0.015)	NULL
DPCR1	135656	genome.wustl.edu	37	6	30916495	30916495	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000462446	+1	known	p.R85H	0.000	193	0%	111	31.5%	0	-	benign(0.03)	tolerated(0.19)	neutral(0.051)	NULL
MICA	100507436	genome.wustl.edu	37	6	31380216	31380216	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000376219	+1	known	p.T336A	0.001	176	0%	163	36.8%	23	65.2%	-	-	-	NULL
DDX39B	7919	genome.wustl.edu	37	6	31503083	31503083	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000453105	-1	known	p.A219T	1.000	31	0%	14	85.7%	61	49.1%	possibly_damaging(0.753)	deleterious(0)	deleterious(0.721)	NULL
PRRC2A	7916	genome.wustl.edu	37	6	31590674	31590674	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080686.2	+1	reviewed	p.P36	0.991	164	0%	129	62%	95	57.8%	-	-	-	HMMPfam_BAT2_N
ABHD16A	7920	genome.wustl.edu	37	6	31661138	31661138	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021160.2	-1	reviewed	p.S167R	1.000	8	0.000	7	0.571	37	29.7%	probably_damaging(0.992)	tolerated(0.43)	neutral(0.461)	NULL
VWA7	80737	genome.wustl.edu	37	6	31741050	31741050	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025258.2	-1	validated	p.R296*	0.020	26	0%	21	33.3%	1	100%	-	-	-	NULL
HSPA1L	3305	genome.wustl.edu	37	6	31779729	31779729	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005527.3	-1	reviewed	p.I7	0.001	35	0%	43	48.8%	2	0%	-	-	-	superfamily_SSF53067
SLC44A4	80736	genome.wustl.edu	37	6	31833543	31833543	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000414427	-1	known	p.W386*	1.000	16	0%	12	50%	3	33.3%	-	-	-	HMMPfam_DUF580
CYP21A2	1589	genome.wustl.edu	37	6	32006262	32006262	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000500.5	+1	reviewed	p.N21	0.000	11	0%	13	46.2%	0	-	-	-	-	NULL
CYP21A2	1589	genome.wustl.edu	37	6	32008270	32008270	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000500.5	+1	reviewed	p.L343	1.000	14	0%	21	28.6%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
TNXB	7148	genome.wustl.edu	37	6	32015689	32015689	+	Silent	SNP	G	G	A	rs146798373	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019105.6	-1	reviewed	p.F3380	0.259	13	0.000	9	0.778	1	100%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TNXB	7148	genome.wustl.edu	37	6	32020526	32020526	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019105.6	-1	reviewed	p.P3010	0.001	3	0.000	7	0.857	1	0%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TAP1	6890	genome.wustl.edu	37	6	32815418	32815418	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000593.5	-1	reviewed	p.G652E	1.000	152	0%	114	39.5%	37	29.7%	probably_damaging(0.98)	deleterious(0.05)	deleterious(0.769)	HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540
COL11A2	1302	genome.wustl.edu	37	6	33134885	33134885	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080680.2	-1	reviewed	p.P1398S	1.000	21	0%	18	22.2%	0	-	unknown(0)	deleterious(0.01)	-	HMMPfam_Collagen
COL11A2	1302	genome.wustl.edu	37	6	33156951	33156951	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080680.2	-1	reviewed	p.D83Y	1.000	28	0%	30	40%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00282,HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases
HSD17B8	7923	genome.wustl.edu	37	6	33173013	33173013	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014234.3	+1	reviewed	p.P96S	1.000	30	0%	25	48%	63	60.3%	possibly_damaging(0.611)	tolerated(0.83)	neutral(0.212)	HMMPfam_adh_short,superfamily_NAD(P)-bd
VPS52	6293	genome.wustl.edu	37	6	33231597	33231597	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022553.4	-1	reviewed	p.Q560H	1.000	68	0%	51	35.3%	56	32.1%	benign(0.044)	deleterious(0.01)	neutral(0.408)	HMMPfam_Vps52
VPS52	6293	genome.wustl.edu	37	6	33235079	33235079	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022553.4	-1	reviewed	p.S337	0.963	40	0%	37	54.1%	45	71.1%	-	-	-	HMMPfam_Vps52
WDR46	9277	genome.wustl.edu	37	6	33254640	33254640	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005452.5	-1	validated	p.K349	1.000	131	0%	109	39.4%	78	39.7%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
RGL2	5863	genome.wustl.edu	37	6	33260281	33260281	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004761.3	-1	validated	p.V683A	1.000	50	0%	59	10.2%	93	10.7%	benign(0.016)	tolerated(1)	neutral(0.001)	HMMPfam_RA,HMMSmart_SM00314,superfamily_Ubiquitin-like
DAXX	1616	genome.wustl.edu	37	6	33287935	33287935	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001141970.1	-1	reviewed	p.D452N	0.768	95	0%	98	16.3%	68	16.1%	unknown(0)	tolerated(0.15)	-	HMMPfam_Daxx
KIFC1	3833	genome.wustl.edu	37	6	33373280	33373280	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002263.3	+1	validated	p.R470W	0.989	10	0.000	8	0.500	68	42.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540
KIFC1	3833	genome.wustl.edu	37	6	33374644	33374644	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002263.3	+1	validated	p.A657T	1.000	112	0%	62	37.1%	131	38.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540
SYNGAP1	8831	genome.wustl.edu	37	6	33405525	33405525	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006772.2	+1	reviewed	p.Y281*	1.000	19	0%	21	47.6%	6	100%	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_PH domain-like
SYNGAP1	8831	genome.wustl.edu	37	6	33412369	33412369	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006772.2	+1	reviewed	p.S1186L	0.991	44	0%	50	54%	13	76.9%	possibly_damaging(0.807)	tolerated(0.06)	deleterious(0.627)	NULL
ITPR3	3710	genome.wustl.edu	37	6	33626588	33626588	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002224.2	+1	validated	p.R171W	1.000	7	0.000	22	0.500	30	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ins145_P3_rec
ITPR3	3710	genome.wustl.edu	37	6	33641984	33641984	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002224.2	+1	validated	e24-1	1.000	48	0%	58	10.3%	0	-	-	-	-	-
LEMD2	221496	genome.wustl.edu	37	6	33747939	33747939	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000442696	-1	known	p.P182H	0.013	60	1.7%	62	40.3%	45	51.1%	-	-	-	NULL
GRM4	2914	genome.wustl.edu	37	6	34026880	34026880	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000841.1	-1	reviewed	p.A300T	0.999	11	0%	17	52.9%	0	-	benign(0.368)	tolerated(0.37)	neutral(0.136)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRM4	2914	genome.wustl.edu	37	6	34100921	34100921	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000841.1	-1	reviewed	p.Q118R	1.000	8	0.000	17	0.412	0	-	possibly_damaging(0.51)	deleterious(0.03)	deleterious(0.535)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
UHRF1BP1	54887	genome.wustl.edu	37	6	34802535	34802535	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017754.3	+1	validated	p.R189Q	1.000	194	0%	114	45.6%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
UHRF1BP1	54887	genome.wustl.edu	37	6	34827178	34827178	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017754.3	+1	validated	p.E1015D	0.984	30	0%	17	23.5%	9	11.1%	probably_damaging(0.999)	tolerated(0.22)	deleterious(0.532)	NULL
ANKS1A	23294	genome.wustl.edu	37	6	35054097	35054097	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000373990	+1	known	p.T444	1.000	15	0%	14	28.6%	0	-	-	-	-	NULL
TCP11	6954	genome.wustl.edu	37	6	35088749	35088749	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001093728.1	-1	validated	p.L231M	0.998	237	0%	121	47.1%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Tcp11
SCUBE3	222663	genome.wustl.edu	37	6	35207577	35207577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152753.2	+1	provisional	p.R293H	1.000	57	0%	47	10.6%	2	0%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_CA,superfamily_EGF/Laminin
ZNF76	7629	genome.wustl.edu	37	6	35260719	35260719	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003427.3	+1	provisional	p.E409D	0.994	21	0%	28	46.4%	51	52.9%	benign(0.001)	deleterious(0.03)	neutral(0.364)	NULL
PPARD	5467	genome.wustl.edu	37	6	35387963	35387963	+	Missense_Mutation	SNP	G	G	A	rs112959486		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006238.4	+1	reviewed	p.G64R	1.000	17	0%	26	30.8%	21	42.8%	benign(0.308)	tolerated(0.06)	neutral(0.418)	NULL
PPARD	5467	genome.wustl.edu	37	6	35393814	35393814	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006238.4	+1	reviewed	p.S428	0.949	22	0%	23	43.5%	57	38.5%	-	-	-	HMMPfam_Hormone_recep,superfamily_Nuclear receptor ligand-binding domain
FKBP5	2289	genome.wustl.edu	37	6	35547913	35547913	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145775.1	-1	reviewed	p.S309L	0.324	229	0%	101	59.4%	8	37.5%	benign(0.036)	tolerated(0.28)	neutral(0.034)	superfamily_TPR-like
SRPK1	6732	genome.wustl.edu	37	6	35888113	35888113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000507909	-1	known	p.G7R	0.000	59	1.7%	71	32.4%	0	-	unknown(0)	-	-	NULL
SLC26A8	116369	genome.wustl.edu	37	6	35987433	35987433	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052961.2	-1	reviewed	p.R18*	0.002	145	0%	102	41.2%	0	-	-	-	-	NULL
BRPF3	27154	genome.wustl.edu	37	6	36175167	36175167	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441123	+1	known	p.G534S	0.994	34	0%	31	35.5%	13	76.9%	-	-	-	NULL
BRPF3	27154	genome.wustl.edu	37	6	36196784	36196784	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015695.2	+1	validated	p.A1129T	1.000	56	0%	45	48.9%	8	25%	unknown(0)	tolerated(0.4)	-	HMMPfam_PWWP,HMMSmart_PWWP,superfamily_SSF63748
PNPLA1	285848	genome.wustl.edu	37	6	36259120	36259120	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000457797	+1	known	p.V77M	0.135	50	0%	33	33.3%	0	-	benign(0.061)	tolerated(0.58)	neutral(0.009)	HMMPfam_Patatin,superfamily_FabD/lysophospholipase-like
PNPLA1	285848	genome.wustl.edu	37	6	36259161	36259161	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000457797	+1	known	p.L90	0.299	49	0%	42	42.9%	0	-	-	-	-	HMMPfam_Patatin,superfamily_FabD/lysophospholipase-like
PNPLA1	285848	genome.wustl.edu	37	6	36262018	36262018	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145716.1	+1	validated	p.D100N	0.982	15	0%	17	58.8%	0	-	probably_damaging(0.982)	tolerated(0.27)	neutral(0.460)	NULL
C6orf222	389384	genome.wustl.edu	37	6	36298254	36298254	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010903.4	-1	validated	p.T72A	0.000	16	0%	15	53.3%	0	-	benign(0.046)	tolerated(0.54)	neutral(0.010)	NULL
STK38	11329	genome.wustl.edu	37	6	36466210	36466210	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007271.2	-1	provisional	p.N336H	1.000	362	0%	184	52.2%	18	55.5%	benign(0.003)	tolerated(0.14)	neutral(0.249)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SRSF3	6428	genome.wustl.edu	37	6	36566643	36566643	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003017.4	+1	validated	p.R75H	1.000	243	0.4%	170	12.9%	339	10%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
CPNE5	57699	genome.wustl.edu	37	6	36711472	36711472	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020939.1	-1	reviewed	p.I519	0.172	17	0%	19	47.4%	2	0%	-	-	-	HMMSmart_VWA,superfamily_SSF53300
CPNE5	57699	genome.wustl.edu	37	6	36766264	36766264	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020939.1	-1	reviewed	p.V99I	0.999	80	0%	62	24.2%	3	33.3%	benign(0.012)	tolerated(1)	neutral(0.001)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
CPNE5	57699	genome.wustl.edu	37	6	36767835	36767835	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020939.1	-1	reviewed	p.E66K	1.000	30	0%	36	50%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
C6orf89	221477	genome.wustl.edu	37	6	36882426	36882426	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152734.3	+1	validated	p.W225R	1.000	123	0%	80	46.3%	25	52%	benign(0.366)	deleterious(0)	deleterious(0.561)	NULL
RNF8	9025	genome.wustl.edu	37	6	37336985	37336985	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000498460	+1	known	p.A112T	0.956	38	0%	22	50%	23	56.5%	-	-	-	NULL
RNF8	9025	genome.wustl.edu	37	6	37358552	37358552	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183078.2	+1	reviewed	p.A424V	0.001	113	0%	65	49.2%	34	50%	unknown(0)	-	-	NULL
DNAH8	1769	genome.wustl.edu	37	6	38743605	38743605	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001371.2	+1	validated	p.A397S	1.000	163	0%	64	32.8%	0	-	benign(0)	tolerated(0.5)	neutral(0.010)	HMMPfam_DHC_N1
DNAH8	1769	genome.wustl.edu	37	6	38749118	38749118	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001371.2	+1	validated	p.R526H	0.994	115	0%	63	66.7%	0	-	benign(0.309)	tolerated(0.17)	neutral(0.155)	HMMPfam_DHC_N1
DNAH8	1769	genome.wustl.edu	37	6	38821120	38821120	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001371.2	+1	validated	p.A1693	0.996	223	0.4%	110	37.3%	0	-	-	-	-	NULL
DNAH8	1769	genome.wustl.edu	37	6	38825330	38825330	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001371.2	+1	validated	p.D1707N	1.000	322	0%	156	39.1%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
DNAH8	1769	genome.wustl.edu	37	6	38939367	38939367	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001371.2	+1	validated	e79-1	1.000	199	0%	69	30.4%	0	-	-	-	-	-
KCNK16	83795	genome.wustl.edu	37	6	39283175	39283175	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135105.1	-1	reviewed	p.L232I	0.000	90	0%	69	18.8%	0	-	unknown(0)	deleterious(0.01)	-	NULL
KIF6	221458	genome.wustl.edu	37	6	39313529	39313529	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000458470	-1	known	p.A631V	0.004	95	0%	100	51%	0	-	-	-	-	NULL
KIF6	221458	genome.wustl.edu	37	6	39512337	39512337	+	Missense_Mutation	SNP	C	C	T	rs191227648	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145027.4	-1	validated	p.E474K	1.000	662	0%	336	35.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MOCS1	4337	genome.wustl.edu	37	6	39881123	39881123	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001075098.3	-1	reviewed	p.F232C	1.000	53	0%	45	15.6%	12	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_Elp3,HMMPfam_Radical_SAM,superfamily_SSF102114
MOCS1	4337	genome.wustl.edu	37	6	39893477	39893477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001075098.3	-1	reviewed	p.K121N	1.000	12	0%	25	52%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_Elp3,HMMPfam_Radical_SAM,superfamily_SSF102114
MOCS1	4337	genome.wustl.edu	37	6	39893509	39893509	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001075098.3	-1	reviewed	p.A111T	0.998	20	0%	22	59.1%	6	33.3%	probably_damaging(0.967)	deleterious(0.02)	deleterious(0.792)	HMMSmart_Elp3,HMMPfam_Radical_SAM,superfamily_SSF102114
LRFN2	57497	genome.wustl.edu	37	6	40400806	40400806	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020737.1	-1	provisional	p.A16V	0.835	7	0.000	13	0.538	0	-	benign(0.002)	tolerated(0.3)	neutral(0.029)	NULL
UNC5CL	222643	genome.wustl.edu	37	6	40998128	40998128	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173561.1	-1	provisional	p.R445W	0.998	57	1.8%	50	10%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Death,HMMSmart_DEATH,superfamily_DEATH_like
APOBEC2	10930	genome.wustl.edu	37	6	41029409	41029409	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006789.3	+1	validated	p.E158D	1.000	44	0%	23	43.5%	0	-	benign(0.315)	tolerated(0.18)	neutral(0.154)	superfamily_Cytidine deaminase-like
NFYA	4800	genome.wustl.edu	37	6	41060818	41060818	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002505.4	+1	reviewed	p.E294D	0.992	99	0%	65	43.1%	44	47.7%	probably_damaging(0.979)	deleterious(0.04)	deleterious(0.771)	HMMPfam_CBFB_NFYA,HMMSmart_SM00521
NFYA	4800	genome.wustl.edu	37	6	41062180	41062180	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002505.4	+1	reviewed	p.R312C	1.000	168	0%	97	46.4%	51	45%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CBFB_NFYA,HMMSmart_SM00521
NFYA	4800	genome.wustl.edu	37	6	41065119	41065119	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002505.4	+1	reviewed	p.E338D	1.000	155	0%	93	49.5%	45	46.6%	benign(0.001)	tolerated(0.17)	neutral(0.059)	NULL
TREM2	54209	genome.wustl.edu	37	6	41126497	41126497	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000373122	-1	known	p.E168D	0.132	83	0%	82	31.7%	8	0%	benign(0.092)	-	-	NULL
TREM2	54209	genome.wustl.edu	37	6	41129057	41129057	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018965.2	-1	reviewed	p.S112N	0.176	29	0%	24	50%	3	0%	possibly_damaging(0.926)	deleterious(0.01)	deleterious(0.780)	HMMPfam_V-set,superfamily_Immunoglobulin
TREM1	54210	genome.wustl.edu	37	6	41250161	41250161	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018643.2	-1	provisional	p.F126	0.000	29	0%	29	17.2%	2	0%	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
TREM1	54210	genome.wustl.edu	37	6	41250427	41250427	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018643.2	-1	provisional	p.D38N	0.000	160	0%	91	57.1%	1	0%	benign(0.001)	tolerated(1)	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
FOXP4	116113	genome.wustl.edu	37	6	41555186	41555186	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012426.1	+1	reviewed	p.P270S	1.000	8	0.000	25	0.440	49	44.8%	probably_damaging(0.988)	tolerated(0.32)	neutral(0.462)	NULL
PGC	5225	genome.wustl.edu	37	6	41704667	41704667	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002630.3	-1	reviewed	p.G364R	0.999	22	0%	34	14.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Asp,superfamily_Pept_Aspartic
USP49	25862	genome.wustl.edu	37	6	41773934	41773934	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018561.3	-1	provisional	p.Y263C	1.000	5	0.000	6	0.833	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UCH,PatternScan_UCH_2_1,superfamily_Cysteine proteinases
CCND3	896	genome.wustl.edu	37	6	41904973	41904973	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000510503	-1	known	p.G111*	1.000	34	0%	22	40.9%	46	26%	-	-	-	NULL
ENSG00000206875	0	genome.wustl.edu	37	6	41986153	41986153	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384148	-1	novel	NULL	0.014	81	0%	23	34.8%	0	-	-	-	-	-
UBR2	23304	genome.wustl.edu	37	6	42582821	42582821	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015255.2	+1	reviewed	p.R333Q	1.000	375	0%	190	35.8%	5	40%	benign(0.158)	tolerated(0.6)	neutral(0.018)	NULL
PRPH2	5961	genome.wustl.edu	37	6	42666223	42666223	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000322.4	-1	reviewed	p.R284H	1.000	71	0%	58	39.7%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tetraspannin
PRPH2	5961	genome.wustl.edu	37	6	42666236	42666236	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000322.4	-1	reviewed	p.T280P	0.924	69	0%	65	56.9%	4	75%	benign(0.367)	deleterious(0.01)	deleterious(0.522)	HMMPfam_Tetraspannin
KIAA0240	23506	genome.wustl.edu	37	6	42797389	42797389	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015349.1	+1	validated	p.E440*	1.000	72	0%	56	21.4%	5	20%	-	-	-	NULL
KIAA0240	23506	genome.wustl.edu	37	6	42828012	42828012	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015349.1	+1	validated	p.F756S	1.000	348	0%	138	44.2%	7	28.5%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
CNPY3	10695	genome.wustl.edu	37	6	42905542	42905542	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006586.3	+1	validated	p.E154K	1.000	41	0%	25	72%	76	34.2%	probably_damaging(0.996)	tolerated(0.51)	deleterious(0.471)	NULL
PEX6	5190	genome.wustl.edu	37	6	42934070	42934070	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000287.3	-1	reviewed	p.R737H	1.000	17	0%	19	42.1%	30	30%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
PPP2R5D	5528	genome.wustl.edu	37	6	42974215	42974215	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000230402	+1	known	p.P46R	0.179	20	0%	33	33.3%	27	33.3%	unknown(0)	deleterious(0)	-	NULL
CUL9	23113	genome.wustl.edu	37	6	43153727	43153727	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015089.2	+1	validated	p.R262H	1.000	15	0%	23	43.5%	5	60%	unknown(0)	deleterious(0)	-	NULL
CUL9	23113	genome.wustl.edu	37	6	43174224	43174224	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015089.2	+1	validated	p.R1730C	0.895	160	0%	104	33.7%	10	30%	benign(0.002)	tolerated(0.23)	neutral(0.042)	HMMPfam_Cullin,superfamily_Cullin homology domain
CUL9	23113	genome.wustl.edu	37	6	43181016	43181016	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015089.2	+1	validated	p.K1781T	1.000	41	0%	32	37.5%	8	50%	benign(0)	tolerated(0.08)	neutral(0.300)	HMMPfam_Cullin,superfamily_Cullin homology domain
CUL9	23113	genome.wustl.edu	37	6	43190597	43190597	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015089.2	+1	validated	p.N2371	1.000	28	0%	18	27.8%	16	18.7%	-	-	-	NULL
TTBK1	84630	genome.wustl.edu	37	6	43226790	43226790	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032538.1	+1	validated	p.T344M	1.000	18	0%	12	33.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DLK2	65989	genome.wustl.edu	37	6	43419757	43419757	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023932.2	-1	validated	p.G113S	0.995	28	0%	31	71%	2	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
YIPF3	25844	genome.wustl.edu	37	6	43481360	43481360	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015388.3	-1	validated	p.S136Y	1.000	50	0%	44	56.8%	188	52.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Yip1
TMEM63B	55362	genome.wustl.edu	37	6	44107240	44107240	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018426.1	+1	validated	p.A148	0.028	54	0%	39	10.3%	43	18.6%	-	-	-	NULL
TMEM63B	55362	genome.wustl.edu	37	6	44121465	44121465	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018426.1	+1	validated	p.Y665	1.000	13	0%	20	30%	64	45.3%	-	-	-	HMMPfam_DUF221
TMEM63B	55362	genome.wustl.edu	37	6	44121578	44121578	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018426.1	+1	validated	p.T703M	0.724	14	0%	19	42.1%	128	40.6%	benign(0.073)	tolerated(0.22)	neutral(0.047)	HMMPfam_DUF221
TMEM63B	55362	genome.wustl.edu	37	6	44122447	44122447	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018426.1	+1	validated	p.L776	1.000	17	0%	20	45%	85	42.3%	-	-	-	NULL
CAPN11	11131	genome.wustl.edu	37	6	44144023	44144023	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007058.3	+1	reviewed	p.R317W	0.996	56	0%	59	45.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_C2,HMMSmart_CysPc,superfamily_SSF54001
CAPN11	11131	genome.wustl.edu	37	6	44147733	44147733	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007058.3	+1	reviewed	p.T491	0.000	45	2.2%	53	62.3%	0	-	-	-	-	HMMPfam_Calpain_III,HMMSmart_calpain_III,superfamily_Peptidase_C2
SLC29A1	2030	genome.wustl.edu	37	6	44197392	44197392	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001078174.1	+1	reviewed	p.A60T	0.000	70	0%	60	28.3%	28	50%	benign(0)	tolerated(0.84)	neutral(0.001)	NULL
HSP90AB1	3326	genome.wustl.edu	37	6	44217120	44217120	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007355.2	+1	provisional	p.D52N	1.000	100	0%	83	43.4%	971	52.4%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_HATPase_c,HMMSmart_SM00387,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
NFKBIE	4794	genome.wustl.edu	37	6	44232907	44232907	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004556.2	-1	validated	p.Q198H	0.004	19	0%	24	45.8%	15	60%	possibly_damaging(0.828)	deleterious(0.01)	deleterious(0.720)	NULL
TCTE1	202500	genome.wustl.edu	37	6	44255444	44255444	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182539.3	-1	validated	p.P40H	0.000	82	0%	77	37.7%	0	-	benign(0.003)	tolerated(0.33)	neutral(0.024)	NULL
AARS2	57505	genome.wustl.edu	37	6	44272437	44272437	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020745.2	-1	validated	p.A566V	0.995	17	0%	22	36.4%	20	40%	probably_damaging(0.977)	deleterious(0)	deleterious(0.863)	HMMPfam_tRNA-synt_2c
CDC5L	988	genome.wustl.edu	37	6	44413535	44413535	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001253.2	+1	reviewed	p.A745	0.171	263	0%	104	51.9%	47	40.4%	-	-	-	NULL
RUNX2	860	genome.wustl.edu	37	6	45399640	45399640	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024630.3	+1	reviewed	p.T223I	1.000	141	0%	79	16.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P53_like_DNA_bnd,HMMPfam_Runt
RUNX2	860	genome.wustl.edu	37	6	45514809	45514809	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024630.3	+1	reviewed	p.L513I	1.000	124	0%	73	30.1%	1	100%	probably_damaging(0.987)	tolerated(0.25)	deleterious(0.473)	HMMPfam_RunxI
RCAN2	10231	genome.wustl.edu	37	6	46214583	46214583	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005822.2	-1	validated	p.S112L	1.000	52	0%	22	27.3%	1	0%	possibly_damaging(0.931)	deleterious(0)	deleterious(0.822)	HMMPfam_Calcipressin
CYP39A1	51302	genome.wustl.edu	37	6	46593195	46593195	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016593.3	-1	reviewed	p.K297N	0.672	287	0%	110	46.4%	9	33.3%	possibly_damaging(0.639)	tolerated(0.06)	deleterious(0.546)	HMMPfam_p450,superfamily_Cytochrome P450
SLC25A27	9481	genome.wustl.edu	37	6	46623614	46623614	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004277.3	+1	reviewed	p.L47	1.000	85	0%	71	46.5%	3	66.6%	-	-	-	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
SLC25A27	9481	genome.wustl.edu	37	6	46632515	46632515	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004277.3	+1	reviewed	p.R171C	1.000	262	0%	124	46.8%	6	100%	probably_damaging(0.991)	tolerated(0.09)	deleterious(0.740)	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
TDRD6	221400	genome.wustl.edu	37	6	46659771	46659771	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010870.2	+1	validated	p.M1302I	0.001	88	0%	55	45.5%	0	-	benign(0)	tolerated(0.51)	neutral(0.009)	HMMPfam_TUDOR
PLA2G7	7941	genome.wustl.edu	37	6	46679243	46679243	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005084.3	-1	reviewed	p.R218Q	0.495	474	0%	232	37.1%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PAF-AH_p_II,superfamily_SSF53474
MEP1A	4224	genome.wustl.edu	37	6	46802315	46802315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005588.2	+1	validated	p.A537V	0.004	104	0%	61	50.8%	0	-	benign(0.121)	tolerated(0.05)	neutral(0.355)	HMMPfam_MATH,HMMSmart_MATH,superfamily_Traf_like
GPR116	221395	genome.wustl.edu	37	6	46821736	46821736	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098518.1	-1	validated	p.L1345H	1.000	190	0%	121	10.7%	4	0%	unknown(0)	deleterious(0)	-	NULL
GPR116	221395	genome.wustl.edu	37	6	46832915	46832915	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098518.1	-1	validated	p.K618	0.335	386	0%	199	50.3%	1	0%	-	-	-	NULL
GPR116	221395	genome.wustl.edu	37	6	46847598	46847598	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098518.1	-1	validated	p.S331	0.000	133	0%	81	37%	3	0%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
TNFRSF21	27242	genome.wustl.edu	37	6	47254171	47254171	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014452.3	-1	reviewed	p.R86H	1.000	32	0%	27	40.7%	47	36.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_TNFR,superfamily_SSF57586
CD2AP	23607	genome.wustl.edu	37	6	47471115	47471115	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012120.2	+1	reviewed	p.E35G	1.000	364	0%	244	46.7%	11	54.5%	probably_damaging(0.999)	tolerated(0.27)	deleterious(0.524)	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3
GPR115	221393	genome.wustl.edu	37	6	47675041	47675041	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153838.3	+1	validated	p.E20D	0.835	283	0%	91	41.8%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
OPN5	221391	genome.wustl.edu	37	6	47775895	47775895	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181744.2	+1	reviewed	p.A254	0.265	265	0%	128	34.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
PTCHD4	442213	genome.wustl.edu	37	6	47846815	47846815	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013732.3	-1	validated	p.R572*	0.998	132	0%	44	45.5%	0	-	-	-	-	HMMPfam_Patched
MUT	4594	genome.wustl.edu	37	6	49421439	49421439	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000255.3	-1	reviewed	p.N314K	1.000	274	0%	90	48.9%	15	86.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_MM_CoA_mutase,superfamily_Cobalamin (vitamin B12)-dependent enzymes
RHAG	6005	genome.wustl.edu	37	6	49583449	49583449	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000324.2	-1	reviewed	p.A176	0.994	137	0%	80	37.5%	0	-	-	-	-	HMMPfam_Ammonium_transp,superfamily_RH_like_transpt
CRISP2	7180	genome.wustl.edu	37	6	49666153	49666153	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142407.1	-1	validated	p.S113	0.854	147	0%	67	38.8%	0	-	-	-	-	HMMSmart_SM00198,HMMPfam_SCP,superfamily_PR-1-like
CRISP3	10321	genome.wustl.edu	37	6	49698888	49698888	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006061.1	-1	provisional	p.D200N	0.965	178	0%	72	51.4%	0	-	benign(0.002)	tolerated(1)	-	HMMPfam_Crisp
TFAP2D	83741	genome.wustl.edu	37	6	50681799	50681799	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172238.3	+1	validated	p.D11N	1.000	86	0%	58	39.7%	0	-	possibly_damaging(0.847)	deleterious(0.01)	deleterious(0.731)	NULL
TFAP2D	83741	genome.wustl.edu	37	6	50712951	50712951	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172238.3	+1	validated	p.L339M	1.000	173	0%	57	47.4%	0	-	benign(0.429)	deleterious(0.02)	deleterious(0.522)	HMMPfam_TF_AP-2
PKHD1	5314	genome.wustl.edu	37	6	51768510	51768510	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138694.3	-1	reviewed	p.G2294E	0.989	127	0%	42	38.1%	0	-	benign(0.391)	deleterious(0.03)	deleterious(0.490)	HMMSmart_SM00710,superfamily_Pectin lyase-like
PKHD1	5314	genome.wustl.edu	37	6	51875241	51875241	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138694.3	-1	reviewed	p.D1873Y	1.000	250	0%	118	53.4%	0	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
PKHD1	5314	genome.wustl.edu	37	6	51913390	51913390	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138694.3	-1	reviewed	p.E769D	0.000	72	0%	44	18.2%	0	-	benign(0.002)	tolerated(0.67)	neutral(0.003)	NULL
MCM3	4172	genome.wustl.edu	37	6	52132735	52132735	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002388.3	-1	reviewed	p.R667Q	0.953	607	0%	529	11.3%	119	7.5%	benign(0.148)	tolerated(0.07)	neutral(0.332)	superfamily_SSF52540
MCM3	4172	genome.wustl.edu	37	6	52138633	52138633	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002388.3	-1	reviewed	p.L486	1.000	49	0%	42	31%	130	35.3%	-	-	-	HMMPfam_MCM,HMMSmart_MCM,HMMSmart_AAA,superfamily_SSF52540
MCM3	4172	genome.wustl.edu	37	6	52143609	52143609	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002388.3	-1	reviewed	p.K270N	1.000	161	0%	101	50.5%	72	47.2%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	HMMSmart_MCM
MCM3	4172	genome.wustl.edu	37	6	52147572	52147572	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002388.3	-1	reviewed	p.K93N	1.000	45	0%	41	46.3%	74	41.8%	possibly_damaging(0.51)	tolerated(0.08)	deleterious(0.471)	superfamily_Nucleic_acid_OB
TRAM2	9697	genome.wustl.edu	37	6	52372408	52372408	+	Missense_Mutation	SNP	C	C	T	rs189107930	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012288.3	-1	reviewed	p.R190H	1.000	117	0%	83	50.6%	4	50%	probably_damaging(0.999)	tolerated(0.09)	deleterious(0.787)	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724
TRAM2	9697	genome.wustl.edu	37	6	52441635	52441635	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012288.3	-1	reviewed	p.F27V	1.000	13	0%	13	46.2%	8	37.5%	probably_damaging(0.957)	deleterious(0.04)	deleterious(0.750)	NULL
GSTA4	2941	genome.wustl.edu	37	6	52849385	52849385	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001512.3	-1	reviewed	p.E97D	1.000	185	0%	82	47.6%	36	33.3%	possibly_damaging(0.711)	tolerated(0.11)	deleterious(0.528)	superfamily_Glutathione S-transferase (GST) C-terminal domain
ICK	22858	genome.wustl.edu	37	6	52878505	52878505	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014920.3	-1	reviewed	p.P369	0.005	156	0%	121	49.6%	14	28.5%	-	-	-	NULL
ELOVL5	60481	genome.wustl.edu	37	6	53140017	53140017	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021814.3	-1	provisional	p.E123*	1.000	174	0%	108	56.5%	60	6.6%	-	-	-	HMMPfam_ELO
GCLC	2729	genome.wustl.edu	37	6	53372343	53372343	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001498.2	-1	reviewed	p.G340D	1.000	454	0%	202	43.1%	24	45.8%	possibly_damaging(0.804)	tolerated(0.64)	neutral(0.305)	HMMPfam_GCS,superfamily_Glutamine synthetase/guanido kinase
LRRC1	55227	genome.wustl.edu	37	6	53785434	53785434	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018214.4	+1	validated	p.R431C	1.000	103	0%	77	49.4%	41	51.2%	probably_damaging(0.973)	tolerated(0.07)	deleterious(0.734)	NULL
MLIP	90523	genome.wustl.edu	37	6	54130753	54130753	+	Nonstop_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138569.2	+1	validated	p.*459C	1.000	167	0%	41	22%	0	-	-	-	-	NULL
HCRTR2	3062	genome.wustl.edu	37	6	55039539	55039539	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001526.3	+1	reviewed	p.E52*	1.000	85	0%	71	29.6%	1	0%	-	-	-	superfamily_SSF81321
COL21A1	81578	genome.wustl.edu	37	6	56044581	56044581	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030820.3	-1	reviewed	p.G145	0.725	124	0%	96	46.9%	37	48.6%	-	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
DST	667	genome.wustl.edu	37	6	56336875	56336875	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015548.4	-1	reviewed	p.A4757	0.781	242	0%	116	49.1%	33	42.4%	-	-	-	superfamily_EF-hand
DST	667	genome.wustl.edu	37	6	56417413	56417413	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015548.4	-1	reviewed	p.E2770*	1.000	98	0%	64	56.2%	1	100%	-	-	-	HMMSmart_SM00150,superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56417618	56417618	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015548.4	-1	reviewed	p.A2701	0.310	96	0%	44	38.6%	3	0%	-	-	-	superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56469055	56469055	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000370769	-1	known	p.K3246N	0.003	167	0%	42	61.9%	0	-	possibly_damaging(0.886)	deleterious(0)	deleterious(0.791)	NULL
DST	667	genome.wustl.edu	37	6	56470240	56470240	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000370769	-1	known	p.V2851	0.000	523	0%	141	47.5%	1	0%	-	-	-	NULL
DST	667	genome.wustl.edu	37	6	56470767	56470767	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000370769	-1	known	p.N2676D	0.041	455	0%	176	49.4%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
DST	667	genome.wustl.edu	37	6	56473941	56473941	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000370769	-1	known	p.E1618*	1.000	274	0%	110	50.9%	0	-	-	-	-	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat
DST	667	genome.wustl.edu	37	6	56481832	56481832	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001723.5	-1	reviewed	p.E2145*	1.000	109	0%	62	35.5%	2	100%	-	-	-	HMMSmart_PLEC,superfamily_SSF75399
DST	667	genome.wustl.edu	37	6	56496033	56496033	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015548.4	-1	reviewed	p.S836Y	1.000	212	0%	122	46.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56499717	56499717	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015548.4	-1	reviewed	p.T537I	0.993	578	0.3%	286	25.5%	2	0%	possibly_damaging(0.918)	tolerated(0.1)	deleterious(0.655)	superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56507223	56507223	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015548.4	-1	reviewed	p.G82	0.112	166	0%	83	48.2%	0	-	-	-	-	NULL
BEND6	221336	genome.wustl.edu	37	6	56880153	56880153	+	Splice_Site	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152731.2	+1	validated	e3+2	0.735	141	0%	59	37.3%	0	-	-	-	-	-
KIAA1586	57691	genome.wustl.edu	37	6	56918562	56918562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020931.2	+1	validated	p.R422Q	0.989	136	0%	68	48.5%	2	0%	possibly_damaging(0.748)	tolerated(0.33)	neutral(0.299)	NULL
ZNF451	26036	genome.wustl.edu	37	6	57013438	57013438	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031623.2	+1	validated	p.K852T	0.015	70	0%	29	58.6%	14	50%	benign(0.01)	deleterious(0.01)	neutral(0.406)	NULL
RAB23	51715	genome.wustl.edu	37	6	57072499	57072499	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016277.3	-1	reviewed	p.E56	1.000	355	0%	155	20%	6	16.6%	-	-	-	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
KHDRBS2	202559	genome.wustl.edu	37	6	62887090	62887090	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152688.2	-1	validated	p.K73N	1.000	584	0%	109	12.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791
KHDRBS2	202559	genome.wustl.edu	37	6	62887168	62887168	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152688.2	-1	validated	p.K47N	1.000	741	0%	151	51%	0	-	benign(0.389)	tolerated(0.49)	neutral(0.135)	NULL
LGSN	51557	genome.wustl.edu	37	6	63990359	63990359	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016571.2	-1	reviewed	p.R366Q	0.988	255	0%	125	56.8%	0	-	probably_damaging(1)	tolerated(0.36)	deleterious(0.520)	HMMPfam_Gln-synt_C,superfamily_Glutamine synthetase/guanido kinase
PTP4A1	7803	genome.wustl.edu	37	6	64289210	64289210	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003463.3	+1	reviewed	p.Y126	0.785	346	0%	135	49.6%	122	54%	-	-	-	HMMPfam_DSPc,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PHF3	23469	genome.wustl.edu	37	6	64390064	64390064	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015153.2	+1	provisional	e2+2	1.000	235	0%	111	37.8%	0	-	-	-	-	-
PHF3	23469	genome.wustl.edu	37	6	64423084	64423084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015153.2	+1	provisional	p.R1867H	0.704	123	0%	66	40.9%	36	41.6%	benign(0.007)	deleterious(0.02)	neutral(0.383)	NULL
PHF3	23469	genome.wustl.edu	37	6	64423279	64423279	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015153.2	+1	provisional	p.R1932K	1.000	90	0%	54	33.3%	42	30.9%	benign(0.001)	tolerated(0.37)	neutral(0.019)	NULL
EYS	346007	genome.wustl.edu	37	6	64431659	64431659	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142800.1	-1	reviewed	p.S2756	1.000	287	0%	93	55.9%	0	-	-	-	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
EYS	346007	genome.wustl.edu	37	6	64499045	64499045	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142800.1	-1	reviewed	p.S2495Y	1.000	48	0%	44	38.6%	0	-	probably_damaging(0.991)	-	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
EYS	346007	genome.wustl.edu	37	6	65300858	65300858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142800.1	-1	reviewed	p.K1634N	0.656	177	0.6%	46	54.3%	0	-	benign(0.043)	-	-	superfamily_Concanavalin A-like lectins/glucanases
EYS	346007	genome.wustl.edu	37	6	66204814	66204814	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142800.1	-1	reviewed	p.R164*	0.768	79	0%	49	36.7%	0	-	-	-	-	NULL
EYS	346007	genome.wustl.edu	37	6	66205284	66205284	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142800.1	-1	reviewed	p.V7A	0.000	89	0%	58	55.2%	0	-	benign(0)	-	-	NULL
BAI3	577	genome.wustl.edu	37	6	70064183	70064183	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001704.2	+1	reviewed	p.S1173Y	1.000	295	0%	119	52.1%	1	100%	possibly_damaging(0.703)	deleterious(0)	deleterious(0.697)	NULL
COL9A1	1297	genome.wustl.edu	37	6	70935713	70935713	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001851.4	-1	reviewed	e37-1	1.000	78	0%	33	42.4%	0	-	-	-	-	-
FAM135A	57579	genome.wustl.edu	37	6	71185396	71185396	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105531.2	+1	validated	p.L110I	1.000	377	0%	107	41.1%	2	0%	possibly_damaging(0.923)	tolerated(0.21)	neutral(0.416)	NULL
FAM135A	57579	genome.wustl.edu	37	6	71235253	71235253	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105531.2	+1	validated	p.H626Q	1.000	92	0%	54	18.5%	5	20%	possibly_damaging(0.926)	tolerated(0.1)	deleterious(0.661)	NULL
FAM135A	57579	genome.wustl.edu	37	6	71235335	71235335	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105531.2	+1	validated	p.S654P	1.000	112	0.9%	55	40%	9	44.4%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
SMAP1	60682	genome.wustl.edu	37	6	71508408	71508408	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001044305.1	+1	reviewed	p.E182*	1.000	254	0%	153	35.9%	1	0%	-	-	-	NULL
OGFRL1	79627	genome.wustl.edu	37	6	72011538	72011538	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024576.3	+1	validated	p.S381N	0.001	84	0%	53	9.4%	13	7.6%	benign(0.312)	tolerated(0.43)	neutral(0.111)	NULL
RIMS1	22999	genome.wustl.edu	37	6	72889303	72889303	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014989.4	+1	reviewed	p.R166Q	1.000	70	0%	55	32.7%	0	-	possibly_damaging(0.855)	tolerated(0.09)	deleterious(0.627)	superfamily_FYVE/PHD zinc finger
RIMS1	22999	genome.wustl.edu	37	6	72960729	72960729	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014989.4	+1	reviewed	p.R826	0.941	456	0%	156	34.6%	0	-	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
RIMS1	22999	genome.wustl.edu	37	6	72962473	72962473	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014989.4	+1	reviewed	p.R903Q	1.000	296	0%	115	43.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
RIMS1	22999	genome.wustl.edu	37	6	73001696	73001696	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014989.4	+1	reviewed	p.R1266H	0.633	46	0%	13	38.5%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
LOC100128859	100128859	genome.wustl.edu	37	6	74079531	74079531	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001714576.1	+1	model	p.P62L	0.000	7	0.000	10	0.400	0	-	-	-	-	NULL
DDX43	55510	genome.wustl.edu	37	6	74117794	74117794	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018665.2	+1	reviewed	p.N383K	1.000	298	0%	167	37.1%	1	0%	benign(0.046)	tolerated(0.13)	neutral(0.255)	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
EEF1A1	1915	genome.wustl.edu	37	6	74228120	74228120	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001402.5	-1	reviewed	p.S329N	1.000	85	0%	59	57.6%	4359	48.1%	possibly_damaging(0.764)	deleterious(0)	deleterious(0.728)	superfamily_Translation proteins
CD109	135228	genome.wustl.edu	37	6	74475755	74475755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133493.3	+1	reviewed	p.G404R	0.000	251	0%	122	50%	3	33.3%	benign(0)	tolerated(0.36)	neutral(0.020)	NULL
CD109	135228	genome.wustl.edu	37	6	74524750	74524750	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133493.3	+1	reviewed	p.R1272Q	0.000	464	0%	136	58.1%	3	100%	benign(0.052)	tolerated(0.2)	neutral(0.052)	NULL
COL12A1	1303	genome.wustl.edu	37	6	75799840	75799840	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004370.5	-1	reviewed	p.P2976H	0.841	22	0%	29	34.5%	75	40%	unknown(0)	-	-	HMMPfam_Collagen
COL12A1	1303	genome.wustl.edu	37	6	75806969	75806969	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004370.5	-1	reviewed	p.P2859	1.000	225	0%	184	45.1%	41	24.3%	-	-	-	HMMPfam_Collagen
COL12A1	1303	genome.wustl.edu	37	6	75815005	75815005	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004370.5	-1	reviewed	p.D2728Y	1.000	60	0%	31	54.8%	44	29.5%	probably_damaging(0.997)	-	-	NULL
COL12A1	1303	genome.wustl.edu	37	6	75818809	75818809	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004370.5	-1	reviewed	p.K2675N	0.997	404	0%	106	43.4%	34	26.4%	possibly_damaging(0.619)	-	-	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases
COL12A1	1303	genome.wustl.edu	37	6	75838103	75838103	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004370.5	-1	reviewed	p.Q2083	1.000	262	0%	95	46.3%	29	24.1%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
COL12A1	1303	genome.wustl.edu	37	6	75901442	75901442	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004370.5	-1	reviewed	p.K123N	1.000	616	0%	216	49.5%	10	30%	possibly_damaging(0.701)	-	-	NULL
FILIP1	27145	genome.wustl.edu	37	6	76024698	76024698	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015687.2	-1	validated	p.A284T	0.987	556	0%	277	37.5%	6	33.3%	benign(0.004)	tolerated(0.68)	neutral(0.002)	HMMPfam_CortBP2
SENP6	26054	genome.wustl.edu	37	6	76419319	76419319	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015571.2	+1	validated	p.V931	0.565	287	0%	130	40.8%	82	48.7%	-	-	-	HMMPfam_Peptidase_C48,superfamily_Cysteine proteinases
IMPG1	3617	genome.wustl.edu	37	6	76751825	76751825	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001563.2	-1	provisional	p.Y29C	0.002	473	0%	174	45.4%	0	-	possibly_damaging(0.944)	tolerated(0.16)	neutral(0.448)	NULL
PHIP	55023	genome.wustl.edu	37	6	79650576	79650576	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017934.5	-1	validated	p.R1767K	1.000	337	0%	145	35.2%	14	35.7%	benign(0.181)	tolerated(0.71)	neutral(0.018)	NULL
PHIP	55023	genome.wustl.edu	37	6	79668221	79668221	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017934.5	-1	validated	p.F1251	1.000	203	0%	64	64.1%	5	60%	-	-	-	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain
PHIP	55023	genome.wustl.edu	37	6	79680569	79680569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017934.5	-1	validated	p.E976K	1.000	763	0.1%	453	50.8%	9	55.5%	benign(0.025)	tolerated(0.11)	neutral(0.273)	NULL
PHIP	55023	genome.wustl.edu	37	6	79726309	79726309	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017934.5	-1	validated	p.R396Q	1.000	322	0%	142	45.1%	9	55.5%	probably_damaging(0.988)	tolerated(0.84)	neutral(0.438)	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase
PHIP	55023	genome.wustl.edu	37	6	79735285	79735285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017934.5	-1	validated	p.D292Y	1.000	140	0%	84	20.2%	4	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMPfam_WD40
LCA5	167691	genome.wustl.edu	37	6	80223347	80223347	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122769.2	-1	reviewed	p.T101I	1.000	98	0%	42	11.9%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
LCA5	167691	genome.wustl.edu	37	6	80223354	80223354	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122769.2	-1	reviewed	p.L99I	0.982	91	0%	42	40.5%	0	-	benign(0.224)	tolerated(0.22)	neutral(0.064)	NULL
ELOVL4	6785	genome.wustl.edu	37	6	80626485	80626485	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022726.3	-1	reviewed	p.F262C	1.000	307	0.3%	168	58.9%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ELO
TTK	7272	genome.wustl.edu	37	6	80717677	80717677	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003318.4	+1	reviewed	p.A97	0.970	132	0%	81	37%	8	75%	-	-	-	NULL
TTK	7272	genome.wustl.edu	37	6	80744707	80744707	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003318.4	+1	reviewed	p.F540L	1.000	221	0%	56	41.1%	13	23%	possibly_damaging(0.556)	deleterious(0.01)	deleterious(0.595)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
BCKDHB	594	genome.wustl.edu	37	6	80877486	80877486	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000056.3	+1	reviewed	p.A145	0.058	209	0%	89	39.3%	14	14.2%	-	-	-	HMMPfam_Transket_pyr,superfamily_Thiamin diphosphate-binding fold (THDP-binding)
BCKDHB	594	genome.wustl.edu	37	6	80878614	80878614	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000056.3	+1	reviewed	p.Y167C	1.000	232	0%	102	46.1%	6	83.3%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Transket_pyr,superfamily_Thiamin diphosphate-binding fold (THDP-binding)
UBE3D	90025	genome.wustl.edu	37	6	83667079	83667079	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198920.1	-1	provisional	p.K367N	0.112	73	0%	43	39.5%	5	80%	benign(0.261)	tolerated(0.33)	neutral(0.051)	HMMPfam_DUF2351
DOPEY1	23033	genome.wustl.edu	37	6	83848697	83848697	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015018.2	+1	validated	p.R1646*	0.990	51	0%	24	45.8%	2	0%	-	-	-	NULL
DOPEY1	23033	genome.wustl.edu	37	6	83872621	83872621	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015018.2	+1	validated	p.L2359I	1.000	330	0%	141	55.3%	17	70.5%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
DOPEY1	23033	genome.wustl.edu	37	6	83877728	83877728	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015018.2	+1	validated	p.R2414*	1.000	73	0%	40	35%	38	23.6%	-	-	-	NULL
ME1	4199	genome.wustl.edu	37	6	83937104	83937104	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002395.4	-1	reviewed	p.P409S	1.000	246	0%	141	42.6%	4	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Malic_M,superfamily_NAD(P)-bd
ME1	4199	genome.wustl.edu	37	6	84117531	84117531	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002395.4	-1	reviewed	p.L56	0.954	338	0%	153	47.1%	0	-	-	-	-	superfamily_SSF53223
SNAP91	9892	genome.wustl.edu	37	6	84300942	84300942	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014841.2	-1	validated	p.D668N	1.000	143	0%	85	38.8%	1	100%	probably_damaging(0.998)	tolerated(0.48)	deleterious(0.485)	NULL
CYB5R4	51167	genome.wustl.edu	37	6	84646064	84646064	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016230.3	+1	validated	p.L359	0.991	217	0%	93	51.6%	6	66.6%	-	-	-	HMMPfam_FAD_binding_6,superfamily_Riboflavin_synthase_like_b-brl
TBX18	9096	genome.wustl.edu	37	6	85446783	85446783	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080508.1	-1	provisional	p.Q482*	1.000	66	0%	54	37%	55	47.2%	-	-	-	NULL
TBX18	9096	genome.wustl.edu	37	6	85446893	85446893	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080508.1	-1	provisional	p.A445V	0.991	51	0%	49	46.9%	58	43.1%	benign(0.006)	tolerated(0.06)	neutral(0.323)	NULL
TBX18	9096	genome.wustl.edu	37	6	85466461	85466461	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080508.1	-1	provisional	p.F242	0.177	40	0%	25	28%	57	42.1%	-	-	-	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,PatternScan_TBOX_2
SNX14	57231	genome.wustl.edu	37	6	86239986	86239986	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153816.3	-1	reviewed	p.H606	1.000	263	0%	120	49.2%	22	54.5%	-	-	-	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain
SYNCRIP	10492	genome.wustl.edu	37	6	86329047	86329047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006372.4	-1	validated	p.R366Q	1.000	430	0%	217	42.4%	121	37.1%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
ZNF292	23036	genome.wustl.edu	37	6	87964998	87964998	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015021.1	+1	validated	p.F551V	1.000	272	0%	120	45%	12	75%	possibly_damaging(0.485)	tolerated(0.13)	neutral(0.413)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF292	23036	genome.wustl.edu	37	6	87967866	87967866	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015021.1	+1	validated	p.E1507K	0.980	65	0%	36	47.2%	26	57.6%	benign(0.056)	deleterious(0)	neutral(0.448)	NULL
ZNF292	23036	genome.wustl.edu	37	6	87969797	87969797	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015021.1	+1	validated	p.V2150	0.917	150	0%	66	30.3%	22	18.1%	-	-	-	NULL
ZNF292	23036	genome.wustl.edu	37	6	87970186	87970186	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015021.1	+1	validated	p.K2280T	1.000	89	0%	43	60.5%	18	38.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
C6orf165	154313	genome.wustl.edu	37	6	88138389	88138389	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031743.2	+1	validated	p.E336K	1.000	285	0%	177	57.6%	4	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SLC35A1	10559	genome.wustl.edu	37	6	88210995	88210995	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006416.4	+1	reviewed	p.V158	1.000	270	0.4%	133	43.6%	12	50%	-	-	-	HMMPfam_Nuc_sug_transp,superfamily_SSF103481
RARS2	57038	genome.wustl.edu	37	6	88228411	88228411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020320.3	-1	reviewed	p.R451H	1.000	53	0%	37	13.5%	62	19.3%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	superfamily_Nucleotidylyl transferase
ORC3	23595	genome.wustl.edu	37	6	88315700	88315700	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181837.1	+1	reviewed	p.T130A	1.000	255	0%	125	36.8%	13	38.4%	possibly_damaging(0.591)	tolerated(0.52)	neutral(0.212)	HMMPfam_ORC3_N
CNR1	1268	genome.wustl.edu	37	6	88854062	88854062	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016083.4	-1	reviewed	p.R311H	1.000	35	0%	41	29.3%	0	-	benign(0.344)	deleterious(0.02)	deleterious(0.491)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CNR1	1268	genome.wustl.edu	37	6	88854954	88854954	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016083.4	-1	reviewed	p.R14C	1.000	83	0%	45	55.6%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
RNGTT	8732	genome.wustl.edu	37	6	89322560	89322560	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003800.3	-1	validated	p.L558M	1.000	141	0%	67	46.3%	10	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_mRNA_cap_C,superfamily_Nucleic acid-binding proteins
RNGTT	8732	genome.wustl.edu	37	6	89650896	89650896	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003800.3	-1	validated	p.R23I	1.000	353	0%	202	40.1%	6	50%	benign(0.191)	tolerated(0.38)	neutral(0.036)	superfamily_(Phosphotyrosine protein) phosphatases II
SRSF12	135295	genome.wustl.edu	37	6	89808362	89808362	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080743.4	-1	validated	p.A241T	1.000	441	0%	202	47.5%	10	60%	benign(0)	tolerated(1)	-	NULL
RRAGD	58528	genome.wustl.edu	37	6	90077831	90077831	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021244.4	-1	validated	p.R383W	1.000	307	0%	137	31.4%	16	50%	benign(0.022)	deleterious(0.03)	neutral(0.365)	NULL
ANKRD6	22881	genome.wustl.edu	37	6	90333624	90333624	+	Missense_Mutation	SNP	G	G	A	rs184506044	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014942.3	+1	validated	p.D356N	1.000	89	0%	59	45.8%	8	25%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
MDN1	23195	genome.wustl.edu	37	6	90428121	90428121	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014611.1	-1	provisional	p.R2183*	1.000	138	0%	74	50%	3	66.6%	-	-	-	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
MDN1	23195	genome.wustl.edu	37	6	90448052	90448052	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014611.1	-1	provisional	p.D1572	0.990	171	0%	85	41.2%	1	100%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
CASP8AP2	9994	genome.wustl.edu	37	6	90581027	90581027	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001137667.1	+1	reviewed	p.L1938V	1.000	296	0%	146	47.3%	7	85.7%	-	-	-	superfamily_Homeodomain-like
GJA10	84694	genome.wustl.edu	37	6	90605201	90605201	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032602.1	+1	validated	p.C338	0.070	27	0%	46	19.6%	0	-	-	-	-	NULL
GJA10	84694	genome.wustl.edu	37	6	90605619	90605619	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032602.1	+1	validated	p.T478A	1.000	97	0%	76	43.4%	0	-	benign(0.009)	tolerated(0.19)	neutral(0.050)	NULL
MAP3K7	6885	genome.wustl.edu	37	6	91246115	91246115	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145331.1	-1	reviewed	p.G433R	1.000	227	0%	99	51.5%	76	50%	possibly_damaging(0.867)	deleterious(0.01)	deleterious(0.742)	NULL
MAP3K7	6885	genome.wustl.edu	37	6	91278339	91278339	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145331.1	-1	reviewed	p.R79W	1.000	239	0%	97	44.3%	29	65.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
EPHA7	2045	genome.wustl.edu	37	6	93967964	93967964	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004440.3	-1	reviewed	p.P655S	1.000	202	0%	60	38.3%	12	58.3%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP
MANEA	79694	genome.wustl.edu	37	6	96053755	96053755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024641.2	+1	validated	p.R288Q	0.050	410	0%	245	38%	7	42.8%	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
MANEA	79694	genome.wustl.edu	37	6	96054210	96054210	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024641.2	+1	validated	p.R440C	1.000	48	0%	37	43.2%	7	71.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FUT9	10690	genome.wustl.edu	37	6	96652077	96652077	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006581.3	+1	validated	p.S349F	0.998	107	0%	53	39.6%	1	0%	possibly_damaging(0.833)	deleterious(0.04)	deleterious(0.666)	HMMPfam_Glyco_transf_10
UFL1	23376	genome.wustl.edu	37	6	96999376	96999376	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015323.4	+1	validated	p.S629Y	1.000	182	0%	24	45.8%	17	58.8%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	NULL
GPR63	81491	genome.wustl.edu	37	6	97246916	97246916	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143957.1	-1	validated	p.F231C	1.000	36	0%	21	42.9%	5	20%	benign(0.143)	deleterious(0)	neutral(0.457)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
KLHL32	114792	genome.wustl.edu	37	6	97561896	97561896	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052904.3	+1	validated	p.D289Y	0.996	29	0%	36	19.4%	6	50%	possibly_damaging(0.843)	deleterious(0.03)	deleterious(0.688)	superfamily_Galactose oxidase central domain
MMS22L	253714	genome.wustl.edu	37	6	97730283	97730283	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198468.2	-1	predicted	p.C24Y	1.000	94	0%	74	14.9%	2	0%	possibly_damaging(0.8)	deleterious(0.01)	deleterious(0.707)	NULL
POU3F2	5454	genome.wustl.edu	37	6	99283974	99283974	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005604.2	+1	validated	p.E409*	1.000	66	0%	62	40.3%	0	-	-	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1
FBXL4	26235	genome.wustl.edu	37	6	99374514	99374514	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012160.3	-1	reviewed	p.T117	0.004	105	0%	71	45.1%	6	50%	-	-	-	NULL
PNISR	25957	genome.wustl.edu	37	6	99851757	99851757	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015491.1	-1	validated	p.A368	1.000	84	0%	34	58.8%	22	36.3%	-	-	-	NULL
PNISR	25957	genome.wustl.edu	37	6	99862454	99862454	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015491.1	-1	validated	p.D28N	1.000	122	0%	68	32.4%	38	31.5%	benign(0.355)	tolerated(0.06)	neutral(0.435)	NULL
USP45	85015	genome.wustl.edu	37	6	99924021	99924021	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080481.1	-1	provisional	p.K311Q	1.000	199	0%	92	35.9%	1	100%	possibly_damaging(0.564)	tolerated(0.35)	neutral(0.213)	HMMPfam_UCH,superfamily_Cysteine proteinases
PRDM13	59336	genome.wustl.edu	37	6	100057144	100057144	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021620.3	+1	validated	p.D120N	1.000	67	0%	54	50%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
SIM1	6492	genome.wustl.edu	37	6	100838499	100838499	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005068.2	-1	reviewed	p.S680L	0.992	136	0%	77	45.5%	0	-	benign(0.004)	deleterious(0)	neutral(0.445)	NULL
SIM1	6492	genome.wustl.edu	37	6	100898183	100898183	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005068.2	-1	reviewed	p.Y103C	1.000	53	0%	46	28.3%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_PAS,HMMPfam_PAS,superfamily_SSF55785
ASCC3	10973	genome.wustl.edu	37	6	100957860	100957860	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006828.2	-1	validated	p.R2137*	1.000	318	0%	175	38.3%	22	27.2%	-	-	-	HMMPfam_Sec63,HMMSmart_SEC63
ASCC3	10973	genome.wustl.edu	37	6	101090573	101090573	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006828.2	-1	validated	p.P1262H	1.000	204	0%	80	62.5%	15	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sec63,HMMSmart_SEC63,superfamily_SSF52540
BVES	11149	genome.wustl.edu	37	6	105564689	105564689	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007073.3	-1	reviewed	p.L235	1.000	257	0%	109	50.5%	1	100%	-	-	-	HMMPfam_Popeye,superfamily_cAMP-binding domain-like
PRDM1	639	genome.wustl.edu	37	6	106553227	106553227	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001198.3	+1	reviewed	p.L398F	0.963	15	0%	23	52.2%	6	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
AIM1	202	genome.wustl.edu	37	6	106968077	106968077	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001624.2	+1	validated	p.S590	0.236	45	0%	40	55%	2	100%	-	-	-	NULL
AIM1	202	genome.wustl.edu	37	6	106969030	106969030	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001624.2	+1	validated	p.S908L	0.760	133	0%	80	42.5%	0	-	possibly_damaging(0.527)	deleterious(0)	deleterious(0.623)	NULL
AIM1	202	genome.wustl.edu	37	6	106991434	106991434	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001624.2	+1	validated	p.P1259	0.000	454	0%	247	18.2%	6	50%	-	-	-	HMMPfam_Crystall,HMMSmart_XTALbg,superfamily_G_crystallin_SF
AIM1	202	genome.wustl.edu	37	6	107009238	107009238	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001624.2	+1	validated	p.R1593*	1.000	193	0%	87	39.1%	5	20%	-	-	-	HMMPfam_Ricin_B_lectin,HMMSmart_RICIN,superfamily_RicinB_like
QRSL1	55278	genome.wustl.edu	37	6	107090882	107090882	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018292.4	+1	validated	p.P99	0.998	415	0%	217	10.6%	12	8.3%	-	-	-	HMMPfam_Amidase,superfamily_Amidase signature (AS) enzymes
QRSL1	55278	genome.wustl.edu	37	6	107103537	107103537	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018292.4	+1	validated	p.T364S	1.000	344	0%	189	43.9%	19	36.8%	benign(0.197)	tolerated(0.6)	neutral(0.023)	HMMPfam_Amidase,superfamily_Amidase signature (AS) enzymes
BEND3	57673	genome.wustl.edu	37	6	107390379	107390379	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080450.2	-1	validated	p.S672R	0.169	4	0.000	8	0.625	2	50%	benign(0.244)	tolerated(0.1)	neutral(0.311)	NULL
PDSS2	57107	genome.wustl.edu	37	6	107655452	107655452	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020381.3	-1	reviewed	p.S127	0.000	59	0%	49	44.9%	8	50%	-	-	-	superfamily_Terpenoid synthases
NR2E1	7101	genome.wustl.edu	37	6	108492665	108492665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003269.3	+1	validated	p.R10H	1.000	42	0%	66	10.6%	0	-	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	NULL
LACE1	246269	genome.wustl.edu	37	6	108645030	108645030	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145315.3	+1	reviewed	p.A47	0.990	81	0%	63	65.1%	2	100%	-	-	-	NULL
ARMC2	84071	genome.wustl.edu	37	6	109175603	109175603	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032131.4	+1	validated	p.P45S	1.000	158	0%	91	56%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PPIL6	285755	genome.wustl.edu	37	6	109748083	109748083	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173672.4	-1	validated	p.R200*	1.000	397	0%	184	50.5%	3	33.3%	-	-	-	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
MICAL1	64780	genome.wustl.edu	37	6	109767477	109767477	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022765.3	-1	validated	p.R815W	0.007	33	0%	28	39.3%	29	58.6%	probably_damaging(0.986)	deleterious(0.01)	deleterious(0.840)	NULL
AKD1	221264	genome.wustl.edu	37	6	109815184	109815184	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000424296	-1	known	p.A924T	1.000	130	0%	62	54.8%	0	-	possibly_damaging(0.506)	tolerated(0.4)	neutral(0.185)	NULL
WASF1	8936	genome.wustl.edu	37	6	110421754	110421754	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024934.1	-1	reviewed	p.E551*	1.000	365	0%	139	38.1%	51	25.4%	-	-	-	NULL
WASF1	8936	genome.wustl.edu	37	6	110429778	110429778	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024934.1	-1	reviewed	p.Y125	0.692	160	0%	82	43.9%	32	28.1%	-	-	-	NULL
METTL24	728464	genome.wustl.edu	37	6	110567422	110567422	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123364.1	-1	inferred	p.K276N	1.000	94	0%	39	48.7%	1	0%	probably_damaging(0.992)	tolerated(0.16)	deleterious(0.507)	NULL
DDO	8528	genome.wustl.edu	37	6	110734662	110734662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003649.2	-1	reviewed	p.D30N	0.863	30	0%	33	54.5%	0	-	benign(0.261)	tolerated(0.15)	neutral(0.268)	NULL
SLC22A16	85413	genome.wustl.edu	37	6	110757113	110757113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033125.2	-1	provisional	p.G455R	0.100	230	0%	104	44.2%	1	0%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SLC22A16	85413	genome.wustl.edu	37	6	110778004	110778004	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033125.2	-1	provisional	p.L90	0.114	163	0%	87	62.1%	0	-	-	-	-	NULL
RPF2	84154	genome.wustl.edu	37	6	111336990	111336990	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032194.1	+1	validated	p.R176H	1.000	262	0%	179	10.1%	55	16.3%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Brix
REV3L	5980	genome.wustl.edu	37	6	111726752	111726752	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002912.3	-1	validated	p.Q162	0.999	343	0%	126	41.3%	6	50%	-	-	-	superfamily_Ribonuclease H-like
LAMA4	3910	genome.wustl.edu	37	6	112460448	112460448	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105206.1	-1	reviewed	p.F1052	0.999	120	0%	68	33.8%	12	16.6%	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
RFPL4B	442247	genome.wustl.edu	37	6	112671441	112671441	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013734.2	+1	validated	p.E177	0.001	39	0%	47	44.7%	0	-	-	-	-	HMMPfam_SPRY
HS3ST5	222537	genome.wustl.edu	37	6	114378527	114378527	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153612.3	-1	validated	p.I312T	1.000	110	0%	77	41.6%	0	-	benign(0)	tolerated(0.72)	neutral(0.002)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
FRK	2444	genome.wustl.edu	37	6	116263644	116263644	+	Missense_Mutation	SNP	C	C	T	rs141525046	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002031.2	-1	reviewed	p.R484H	0.991	237	0%	72	41.7%	3	33.3%	benign(0)	tolerated(0.4)	neutral(0.016)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
FRK	2444	genome.wustl.edu	37	6	116263730	116263730	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002031.2	-1	reviewed	p.P455	0.015	174	0%	78	38.5%	8	12.5%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
FRK	2444	genome.wustl.edu	37	6	116288821	116288821	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002031.2	-1	reviewed	p.R231H	1.000	209	0%	94	20.2%	6	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_Kinase_like,superfamily_SSF55550
FRK	2444	genome.wustl.edu	37	6	116381399	116381399	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002031.2	-1	reviewed	p.S26P	0.000	50	0%	39	33.3%	4	25%	benign(0)	tolerated(0.34)	neutral(0.023)	NULL
COL10A1	1300	genome.wustl.edu	37	6	116441388	116441388	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000493.3	-1	reviewed	p.G631C	1.000	108	0%	80	55%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like
NT5DC1	221294	genome.wustl.edu	37	6	116542378	116542378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152729.2	+1	reviewed	p.E231K	0.050	187	0%	55	47.3%	25	56%	benign(0.002)	tolerated(0.54)	neutral(0.007)	HMMPfam_5_nucleotid
NT5DC1	221294	genome.wustl.edu	37	6	116544280	116544280	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152729.2	+1	reviewed	p.P263H	1.000	398	0%	144	17.4%	38	13.1%	possibly_damaging(0.839)	deleterious(0)	deleterious(0.765)	HMMPfam_5_nucleotid
TSPYL4	23270	genome.wustl.edu	37	6	116574535	116574535	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021648.4	-1	validated	p.E213K	1.000	53	0%	53	32.1%	18	33.3%	probably_damaging(0.997)	tolerated(0.3)	deleterious(0.495)	HMMPfam_NAP
DSE	29940	genome.wustl.edu	37	6	116757448	116757448	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080976.1	+1	reviewed	p.F606C	0.749	94	0%	54	42.6%	20	55%	benign(0.029)	deleterious(0.02)	neutral(0.385)	NULL
FAM26F	441168	genome.wustl.edu	37	6	116784807	116784807	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010919.1	+1	predicted	p.T296M	0.000	125	0.8%	103	46.6%	8	12.5%	possibly_damaging(0.583)	tolerated(0.15)	neutral(0.442)	NULL
BET3L	100128327	genome.wustl.edu	37	6	116821770	116821770	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139444.2	-1	validated	p.K100N	1.000	219	0%	72	55.6%	0	-	benign(0)	tolerated(0.61)	neutral(0.004)	HMMPfam_TRAPP
FAM26E	254228	genome.wustl.edu	37	6	116836777	116836777	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153711.2	+1	validated	p.C185	0.995	153	0%	59	25.4%	1	0%	-	-	-	NULL
RSPH4A	345895	genome.wustl.edu	37	6	116948838	116948838	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010892.2	+1	reviewed	p.E323G	1.000	273	0%	149	36.9%	2	0%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_Radial_spoke
RSPH4A	345895	genome.wustl.edu	37	6	116948931	116948931	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010892.2	+1	reviewed	p.R354H	1.000	244	0%	139	13.7%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Radial_spoke
RFX6	222546	genome.wustl.edu	37	6	117232164	117232164	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173560.2	+1	validated	p.A247T	1.000	268	0%	119	44.5%	0	-	possibly_damaging(0.733)	tolerated(0.05)	deleterious(0.613)	NULL
ROS1	6098	genome.wustl.edu	37	6	117609921	117609921	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002944.2	-1	reviewed	p.P2260S	0.026	257	0%	102	38.2%	0	-	benign(0)	tolerated(0.34)	neutral(0.023)	NULL
ROS1	6098	genome.wustl.edu	37	6	117642540	117642540	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002944.2	-1	reviewed	p.K1887Q	0.760	177	0%	65	50.8%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
DCBLD1	285761	genome.wustl.edu	37	6	117841041	117841041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173674.1	+1	provisional	p.V130I	0.329	204	0.5%	87	33.3%	10	10%	benign(0.253)	tolerated(0.58)	neutral(0.031)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CEP85L	387119	genome.wustl.edu	37	6	118953695	118953695	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042475.2	-1	validated	p.N51	0.065	161	0%	85	43.5%	0	-	-	-	-	NULL
FAM184A	79632	genome.wustl.edu	37	6	119345176	119345176	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024581.4	-1	validated	p.D321G	1.000	185	0%	67	56.7%	1	100%	benign(0.418)	tolerated(0.21)	neutral(0.179)	NULL
MAN1A1	4121	genome.wustl.edu	37	6	119509653	119509653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005907.2	-1	reviewed	p.P546S	1.000	332	0%	160	42.5%	15	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_47,superfamily_Glyco_hydro_47
MAN1A1	4121	genome.wustl.edu	37	6	119511012	119511012	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005907.2	-1	reviewed	p.G455R	1.000	71	0%	56	51.8%	13	23%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_47,superfamily_Glyco_hydro_47
C6orf170	221322	genome.wustl.edu	37	6	121427174	121427174	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152730.4	-1	validated	p.S1154A	1.000	161	0%	59	42.4%	3	33.3%	possibly_damaging(0.865)	tolerated(0.16)	neutral(0.395)	superfamily_Ypt/Rab-GAP domain of gyp1p
C6orf170	221322	genome.wustl.edu	37	6	121433702	121433702	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152730.4	-1	validated	p.F1091L	1.000	302	0%	135	40%	1	0%	probably_damaging(0.987)	tolerated(0.47)	neutral(0.448)	NULL
HSF2	3298	genome.wustl.edu	37	6	122733833	122733833	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004506.3	+1	validated	p.R85I	1.000	298	0%	121	54.5%	5	60%	possibly_damaging(0.869)	deleterious(0)	deleterious(0.782)	HMMPfam_HSF_DNA-bind,HMMSmart_HSF,superfamily_SSF46785
SMPDL3A	10924	genome.wustl.edu	37	6	123130474	123130474	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006714.3	+1	validated	p.Q428R	0.998	117	0%	72	41.7%	2	100%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	NULL
TRDN	10345	genome.wustl.edu	37	6	123592325	123592325	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006073.2	-1	validated	p.K560T	0.956	459	0%	102	35.3%	0	-	possibly_damaging(0.936)	tolerated(0.11)	deleterious(0.653)	NULL
TPD52L1	7164	genome.wustl.edu	37	6	125578299	125578299	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003287.2	+1	reviewed	p.L161F	1.000	120	0%	71	49.3%	127	59%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_TPD52
HEY2	23493	genome.wustl.edu	37	6	126080510	126080510	+	Silent	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012259.2	+1	reviewed	p.L192	0.787	29	0%	31	29%	64	42.1%	-	-	-	NULL
NCOA7	135112	genome.wustl.edu	37	6	126196039	126196039	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181782.3	+1	validated	p.D92	1.000	225	0%	76	11.8%	1	0%	-	-	-	NULL
HINT3	135114	genome.wustl.edu	37	6	126293444	126293444	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138571.4	+1	validated	p.R120I	0.968	344	0%	157	45.9%	39	48.7%	possibly_damaging(0.903)	tolerated(0.09)	deleterious(0.654)	HMMPfam_HIT,superfamily_His_triad-like_motif
LOC728666	728666	genome.wustl.edu	37	6	126965283	126965283	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_015645.3	+1	model	NULL	1.000	85	0%	57	50.9%	12	0%	-	-	-	-
RSPO3	84870	genome.wustl.edu	37	6	127440409	127440409	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032784.3	+1	reviewed	p.A24	1.000	246	0%	229	48.9%	0	-	-	-	-	superfamily_Growth factor receptor domain
KIAA0408	9729	genome.wustl.edu	37	6	127767816	127767816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014702.4	-1	validated	p.R550C	0.996	169	0%	84	44%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SOGA3	387104	genome.wustl.edu	37	6	127796580	127796580	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012279.2	-1	validated	p.R864H	1.000	13	0%	13	38.5%	0	-	probably_damaging(0.996)	tolerated(0.17)	deleterious(0.520)	NULL
SOGA3	387104	genome.wustl.edu	37	6	127797352	127797352	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012279.2	-1	validated	p.E607K	1.000	91	0%	83	54.2%	0	-	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	NULL
SOGA3	387104	genome.wustl.edu	37	6	127797514	127797514	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012279.2	-1	validated	p.F553I	1.000	113	0%	68	16.2%	0	-	benign(0.042)	tolerated(0.08)	neutral(0.302)	NULL
THEMIS	387357	genome.wustl.edu	37	6	128176236	128176236	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010923.2	-1	reviewed	p.I63	0.993	390	0%	96	55.2%	0	-	-	-	-	NULL
PTPRK	5796	genome.wustl.edu	37	6	128312532	128312532	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135648.1	-1	validated	p.P968	0.998	265	0.4%	68	41.2%	32	25%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
PTPRK	5796	genome.wustl.edu	37	6	128540178	128540178	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135648.1	-1	validated	p.A253T	1.000	209	0%	76	35.5%	19	68.4%	possibly_damaging(0.943)	tolerated(0.05)	deleterious(0.733)	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
LAMA2	3908	genome.wustl.edu	37	6	129511407	129511407	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000426.3	+1	reviewed	p.E509*	1.000	325	0%	173	35.3%	0	-	-	-	-	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,superfamily_ConA_like_lec_gl,superfamily_SSF57196
LAMA2	3908	genome.wustl.edu	37	6	129663582	129663582	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000426.3	+1	reviewed	p.C1469Y	1.000	120	0%	66	40.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,superfamily_ConA_like_lec_gl,superfamily_SSF57196
LAMA2	3908	genome.wustl.edu	37	6	129712767	129712767	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000426.3	+1	reviewed	p.T1735A	0.000	463	0.2%	162	47.5%	0	-	benign(0)	tolerated(0.76)	neutral(0.001)	superfamily_ConA_like_lec_gl,HMMPfam_Laminin_I
TMEM244	253582	genome.wustl.edu	37	6	130166976	130166976	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010876.1	-1	provisional	p.L19I	0.000	142	0%	54	37%	0	-	benign(0.038)	tolerated(0.12)	neutral(0.263)	NULL
L3MBTL3	84456	genome.wustl.edu	37	6	130392204	130392204	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032438.1	+1	validated	p.T392	1.000	316	0%	134	50.7%	8	62.5%	-	-	-	HMMPfam_MBT,HMMSmart_SM00561,superfamily_Tudor/PWWP/MBT
L3MBTL3	84456	genome.wustl.edu	37	6	130455046	130455046	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032438.1	+1	validated	p.D732A	1.000	346	0%	131	38.9%	9	44.4%	possibly_damaging(0.658)	tolerated(0.08)	deleterious(0.532)	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
ARG1	383	genome.wustl.edu	37	6	131897803	131897803	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000045.2	+1	reviewed	p.P20S	1.000	328	0%	137	43.1%	0	-	benign(0.007)	tolerated(0.2)	neutral(0.049)	HMMPfam_Arginase,superfamily_Arginase/deacetylase
ARG1	383	genome.wustl.edu	37	6	131900335	131900335	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000045.2	+1	reviewed	p.S72Y	0.859	90	0%	45	53.3%	0	-	possibly_damaging(0.561)	tolerated(0.92)	neutral(0.192)	HMMPfam_Arginase,superfamily_Arginase/deacetylase
ENPP3	5169	genome.wustl.edu	37	6	131973995	131973995	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005021.3	+1	reviewed	p.N143S	0.011	151	0%	45	24.4%	1	100%	benign(0)	tolerated(0.29)	neutral(0.029)	NULL
ENPP3	5169	genome.wustl.edu	37	6	131995443	131995443	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000427148	+1	known	p.A228T	0.000	50	0%	28	25%	0	-	unknown(0)	tolerated(0.16)	-	superfamily_Alkaline_phosphatase_core
ENPP3	5169	genome.wustl.edu	37	6	131996300	131996300	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005021.3	+1	reviewed	p.S281	0.978	196	0%	86	41.9%	0	-	-	-	-	HMMPfam_Phosphodiest,superfamily_Alkaline_phosphatase_core
OR2A4	79541	genome.wustl.edu	37	6	132022474	132022474	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030908.1	-1	provisional	p.Q23R	0.102	40	0%	56	25%	0	-	benign(0.002)	tolerated(0.06)	neutral(0.323)	superfamily_SSF81321
CTAGE9	643854	genome.wustl.edu	37	6	132031695	132031695	+	Missense_Mutation	SNP	C	C	G	rs2072311	byCluster	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145659.1	-1	provisional	p.E155Q	0.000	368	23.6%	334	29.3%	0	-	probably_damaging(0.999)	tolerated(0.18)	deleterious(0.546)	NULL
ENPP1	5167	genome.wustl.edu	37	6	132206138	132206138	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006208.2	+1	reviewed	p.V793	0.668	424	0%	299	54.8%	8	25%	-	-	-	HMMSmart_NUC,superfamily_SSF54060
TAAR9	134860	genome.wustl.edu	37	6	132859517	132859517	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175057.3	+1	reviewed	p.G30D	0.001	151	0%	70	42.9%	0	-	possibly_damaging(0.947)	tolerated(0.42)	neutral(0.405)	superfamily_Family A G protein-coupled receptor-like
TAAR6	319100	genome.wustl.edu	37	6	132891557	132891557	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175067.1	+1	reviewed	p.V33M	0.000	152	0%	85	37.6%	0	-	benign(0.005)	tolerated(0.08)	neutral(0.300)	superfamily_SSF81321
TAAR2	9287	genome.wustl.edu	37	6	132938450	132938450	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033080.1	-1	validated	p.A299T	1.000	185	0%	54	50%	0	-	benign(0.057)	tolerated(0.35)	neutral(0.024)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
VNN2	8875	genome.wustl.edu	37	6	133072350	133072350	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004665.2	-1	reviewed	p.E378D	0.000	378	0%	130	38.5%	1	0%	benign(0)	tolerated(0.57)	neutral(0.006)	NULL
VNN2	8875	genome.wustl.edu	37	6	133078957	133078957	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004665.2	-1	reviewed	p.T22	0.000	133	0%	75	33.3%	0	-	-	-	-	superfamily_Ntlse/CNhydtse
SLC18B1	116843	genome.wustl.edu	37	6	133105182	133105182	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052831.2	-1	validated	p.P183H	0.999	176	0%	81	37%	23	21.7%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
TBPL1	9519	genome.wustl.edu	37	6	134303769	134303769	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004865.2	+1	reviewed	p.I67V	1.000	286	0%	113	54%	25	56%	benign(0.001)	tolerated(1)	-	HMMPfam_TBP,superfamily_TATA-box binding protein-like
SLC2A12	154091	genome.wustl.edu	37	6	134350571	134350571	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145176.2	-1	validated	p.T131M	0.000	116	0%	65	40%	11	36.3%	benign(0.102)	tolerated(0.23)	neutral(0.050)	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter
SGK1	6446	genome.wustl.edu	37	6	134491540	134491540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143676.1	-1	reviewed	p.E483K	1.000	35	0%	37	43.2%	51	45%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMSmart_S_TK_X,HMMPfam_Pkinase_C
SGK1	6446	genome.wustl.edu	37	6	134493833	134493833	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143676.1	-1	reviewed	p.L305S	1.000	54	0%	41	41.5%	40	57.5%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
HBS1L	10767	genome.wustl.edu	37	6	135303626	135303626	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006620.3	-1	reviewed	p.M523L	1.000	260	0%	76	55.3%	51	60.7%	benign(0.001)	tolerated(0.17)	neutral(0.059)	HMMPfam_GTP_EFTU_D2,superfamily_Translation proteins
PDE7B	27115	genome.wustl.edu	37	6	136477031	136477031	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000446774	+1	known	p.L177	0.590	8	0.000	6	0.667	0	-	-	-	-	NULL
MAP7	9053	genome.wustl.edu	37	6	136693712	136693712	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003980.3	-1	reviewed	p.S268L	0.962	224	0%	133	54.1%	32	46.8%	unknown(0)	tolerated(0.32)	-	NULL
MAP3K5	4217	genome.wustl.edu	37	6	136878912	136878912	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005923.3	-1	reviewed	p.R1370Q	1.000	167	0%	97	36.1%	12	41.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_SAM_homology
MAP3K5	4217	genome.wustl.edu	37	6	137015428	137015428	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005923.3	-1	reviewed	p.R368I	1.000	133	0%	45	55.6%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC35D3	340146	genome.wustl.edu	37	6	137245552	137245552	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008783.1	+1	provisional	p.A323	0.009	33	0%	50	38%	0	-	-	-	-	NULL
IL20RA	53832	genome.wustl.edu	37	6	137338238	137338238	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014432.2	-1	reviewed	p.P31S	0.732	154	0%	72	54.2%	1	0%	possibly_damaging(0.489)	tolerated(0.74)	neutral(0.164)	HMMPfam_IL10Ra-bind
IFNGR1	3459	genome.wustl.edu	37	6	137524736	137524736	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000416.2	-1	reviewed	p.S211	0.000	227	0%	101	10.9%	43	13.9%	-	-	-	HMMPfam_IFNGR1,superfamily_Fibronectin type III
KIAA1244	57221	genome.wustl.edu	37	6	138607131	138607131	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020340.4	+1	validated	p.S837L	0.971	90	0%	77	16.9%	5	0%	benign(0.31)	tolerated(0.35)	neutral(0.117)	NULL
KIAA1244	57221	genome.wustl.edu	37	6	138618045	138618045	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020340.4	+1	validated	p.L1201F	1.000	43	0%	40	62.5%	11	18.1%	benign(0.001)	tolerated(0.11)	neutral(0.272)	NULL
KIAA1244	57221	genome.wustl.edu	37	6	138634997	138634997	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020340.4	+1	validated	p.L1422	1.000	194	0%	149	12.1%	9	11.1%	-	-	-	NULL
KIAA1244	57221	genome.wustl.edu	37	6	138655415	138655415	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020340.4	+1	validated	p.A1811V	1.000	27	0%	20	35%	18	38.8%	probably_damaging(0.998)	tolerated(0.53)	deleterious(0.482)	NULL
NHSL1	57224	genome.wustl.edu	37	6	138752630	138752630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144060.1	-1	validated	p.P951H	0.998	41	0%	28	57.1%	12	41.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
NHSL1	57224	genome.wustl.edu	37	6	138752696	138752696	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144060.1	-1	validated	p.A929V	0.008	41	0%	24	62.5%	20	30%	benign(0)	tolerated(0.11)	neutral(0.272)	NULL
TXLNB	167838	genome.wustl.edu	37	6	139581478	139581478	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153235.3	-1	validated	p.R327*	0.799	224	0%	150	44%	0	-	-	-	-	HMMPfam_Taxilin
GPR126	57211	genome.wustl.edu	37	6	142711439	142711439	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198569.2	+1	reviewed	p.R423C	0.007	203	0%	82	51.2%	3	33.3%	possibly_damaging(0.783)	deleterious(0.03)	deleterious(0.657)	NULL
GPR126	57211	genome.wustl.edu	37	6	142741020	142741020	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198569.2	+1	reviewed	p.F1033S	1.000	590	0%	183	12%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_2,superfamily_SSF81321
HIVEP2	3097	genome.wustl.edu	37	6	143081525	143081525	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006734.3	-1	provisional	p.S1967L	0.999	177	0%	123	31.7%	7	14.2%	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	NULL
HIVEP2	3097	genome.wustl.edu	37	6	143090724	143090724	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006734.3	-1	provisional	p.L1718I	1.000	183	0%	125	13.6%	4	50%	benign(0.178)	deleterious(0.02)	neutral(0.400)	NULL
HIVEP2	3097	genome.wustl.edu	37	6	143093717	143093717	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006734.3	-1	provisional	p.P720L	0.840	149	0%	131	50.4%	17	52.9%	possibly_damaging(0.898)	deleterious(0.02)	deleterious(0.738)	NULL
HIVEP2	3097	genome.wustl.edu	37	6	143094243	143094243	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006734.3	-1	provisional	p.S545P	1.000	165	0%	109	11%	6	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
PEX3	8504	genome.wustl.edu	37	6	143792693	143792693	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003630.2	+1	reviewed	e7-1	1.000	394	0%	210	43.3%	0	-	-	-	-	-
FUCA2	2519	genome.wustl.edu	37	6	143825093	143825093	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032020.3	-1	validated	p.Y237H	0.998	90	0%	46	34.8%	58	43.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Alpha_L_fucos,HMMSmart_Alpha_L_fucos,superfamily_Glyco_hydro_cat
LTV1	84946	genome.wustl.edu	37	6	144178565	144178565	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032860.3	+1	provisional	p.E175*	0.019	394	0%	234	49.6%	24	16.6%	-	-	-	HMMPfam_LTV
LTV1	84946	genome.wustl.edu	37	6	144184236	144184236	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032860.3	+1	provisional	p.R377Q	0.025	270	0%	118	51.7%	22	9%	benign(0.006)	tolerated(1)	-	HMMPfam_LTV
ZC2HC1B	153918	genome.wustl.edu	37	6	144207282	144207282	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000416313	+1	known	p.N59S	0.000	189	0%	53	39.6%	0	-	-	-	-	NULL
UTRN	7402	genome.wustl.edu	37	6	145021242	145021242	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007124.2	+1	reviewed	p.A2558T	1.000	129	0%	59	20.3%	11	0%	probably_damaging(0.996)	tolerated(0.25)	deleterious(0.498)	superfamily_Spectrin
UTRN	7402	genome.wustl.edu	37	6	145115078	145115078	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007124.2	+1	reviewed	p.A3010V	0.994	58	0%	47	51.1%	7	42.8%	benign(0.01)	deleterious(0.01)	neutral(0.406)	HMMPfam_efhand_2,superfamily_SSF47473
UTRN	7402	genome.wustl.edu	37	6	145160324	145160324	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007124.2	+1	reviewed	p.R3361*	1.000	155	0.6%	105	48.6%	13	23%	-	-	-	NULL
SHPRH	257218	genome.wustl.edu	37	6	146234648	146234648	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042683.2	-1	validated	p.P1435H	1.000	375	0%	116	48.3%	3	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_RING/U-box
SHPRH	257218	genome.wustl.edu	37	6	146243935	146243935	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042683.2	-1	validated	p.T1199P	1.000	219	0%	52	50%	5	60%	probably_damaging(0.979)	deleterious(0.02)	deleterious(0.805)	NULL
GRM1	2911	genome.wustl.edu	37	6	146350783	146350783	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000838.3	+1	reviewed	p.D44Y	1.000	44	0%	62	35.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF53822
GRM1	2911	genome.wustl.edu	37	6	146351350	146351350	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000838.3	+1	reviewed	p.E233*	1.000	25	0%	22	36.4%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_SSF53822
GRM1	2911	genome.wustl.edu	37	6	146673553	146673553	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000838.3	+1	reviewed	p.D452Y	1.000	114	0%	82	12.2%	0	-	possibly_damaging(0.455)	deleterious(0)	deleterious(0.594)	HMMPfam_ANF_receptor,superfamily_SSF53822
GRM1	2911	genome.wustl.edu	37	6	146755323	146755323	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000838.3	+1	reviewed	p.P992	0.269	12	0%	14	78.6%	0	-	-	-	-	NULL
ADGB	79747	genome.wustl.edu	37	6	147090158	147090158	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024694.3	+1	provisional	p.N1251K	0.004	470	0%	151	47.7%	0	-	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
STXBP5	134957	genome.wustl.edu	37	6	147588219	147588219	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127715.1	+1	reviewed	e7-1	1.000	977	0%	352	40.9%	1	100%	-	-	-	-
STXBP5	134957	genome.wustl.edu	37	6	147684583	147684583	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127715.1	+1	reviewed	p.E886D	0.963	169	0%	99	51.5%	7	42.8%	benign(0)	tolerated(0.53)	neutral(0.007)	NULL
SASH1	23328	genome.wustl.edu	37	6	148869673	148869673	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015278.3	+1	validated	p.P1241	0.144	14	0.000	8	0.625	7	71.4%	-	-	-	HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2
TAB2	23118	genome.wustl.edu	37	6	149699214	149699214	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015093.4	+1	reviewed	p.Y55H	1.000	163	0%	98	53.1%	19	47.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PPIL4	85313	genome.wustl.edu	37	6	149826758	149826758	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139126.2	-1	reviewed	p.R437Q	0.921	650	0.2%	355	52.4%	37	48.6%	unknown(0)	-	-	superfamily_RNA-binding domain RBD
PPIL4	85313	genome.wustl.edu	37	6	149862666	149862666	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139126.2	-1	reviewed	p.H43Y	1.000	305	0%	189	42.9%	24	37.5%	benign(0.003)	deleterious(0.02)	neutral(0.383)	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
NUP43	348995	genome.wustl.edu	37	6	150063596	150063596	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198887.1	-1	validated	p.I144	0.996	127	0%	99	46.5%	20	15%	-	-	-	HMMSmart_WD40,superfamily_WD40_like
RAET1G	353091	genome.wustl.edu	37	6	150240332	150240332	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001788.2	-1	provisional	p.T160A	0.013	402	0.2%	310	50%	1	0%	benign(0.006)	tolerated(1)	-	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain
ULBP1	80329	genome.wustl.edu	37	6	150290008	150290008	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025218.2	+1	provisional	e2+2	0.545	93	0%	59	67.8%	0	-	-	-	-	-
PLEKHG1	57480	genome.wustl.edu	37	6	151161366	151161366	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029884.1	+1	provisional	p.N1164	1.000	87	0%	60	41.7%	12	25%	-	-	-	NULL
MTHFD1L	25902	genome.wustl.edu	37	6	151247259	151247259	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015440.3	+1	validated	p.D362Y	1.000	220	0%	114	53.5%	19	57.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FTHFS,superfamily_P-loop containing nucleoside triphosphate hydrolases
AKAP12	9590	genome.wustl.edu	37	6	151672061	151672061	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005100.3	+1	reviewed	p.A845	0.762	24	0%	21	76.2%	46	52.1%	-	-	-	NULL
ESR1	2099	genome.wustl.edu	37	6	152201798	152201798	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000125.3	+1	reviewed	p.D218N	1.000	65	0%	46	10.9%	44	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
SYNE1	23345	genome.wustl.edu	37	6	152646231	152646231	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.G5215	0.014	88	0%	76	48.7%	0	-	-	-	-	HMMSmart_SM00150,superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152650942	152650942	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.S4960P	0.988	173	0%	131	47.3%	0	-	benign(0)	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152651999	152651999	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.N4607	0.306	423	0%	206	44.7%	2	100%	-	-	-	HMMSmart_SM00150,superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152652365	152652365	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.L4485	0.047	107	0%	71	11.3%	3	0%	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150
SYNE1	23345	genome.wustl.edu	37	6	152652831	152652831	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.D4330G	1.000	160	0%	84	14.3%	0	-	benign(0.059)	-	-	superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152706914	152706914	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.V2849	0.996	264	0%	112	34.8%	0	-	-	-	-	HMMSmart_SM00150,superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152751806	152751806	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.I1500M	0.018	177	0%	89	44.9%	0	-	possibly_damaging(0.502)	-	-	HMMSmart_SM00150,superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152772251	152772251	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.R1039S	0.040	186	0%	126	34.9%	0	-	possibly_damaging(0.888)	deleterious(0.02)	deleterious(0.730)	NULL
SYNE1	23345	genome.wustl.edu	37	6	152826376	152826376	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.A246	0.208	199	0%	99	26.3%	1	0%	-	-	-	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
SYNE1	23345	genome.wustl.edu	37	6	152826379	152826379	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182961.2	-1	reviewed	p.I245	0.728	194	0%	99	46.5%	1	0%	-	-	-	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
VIP	7432	genome.wustl.edu	37	6	153075362	153075362	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003381.2	+1	reviewed	p.D57N	0.889	200	0%	48	43.8%	0	-	possibly_damaging(0.94)	deleterious(0.02)	deleterious(0.768)	NULL
FBXO5	26271	genome.wustl.edu	37	6	153296153	153296153	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012177.3	-1	reviewed	p.G236D	1.000	328	0%	187	34.8%	10	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FBXO5	26271	genome.wustl.edu	37	6	153296364	153296364	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012177.3	-1	reviewed	p.E166K	0.003	375	0%	212	39.6%	15	33.3%	benign(0)	tolerated(0.3)	neutral(0.029)	NULL
RGS17	26575	genome.wustl.edu	37	6	153332789	153332789	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012419.4	-1	reviewed	p.D185Y	1.000	216	0%	130	35.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
OPRM1	4988	genome.wustl.edu	37	6	154412548	154412548	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145279.1	+1	reviewed	p.R462C	0.995	26	0%	23	52.2%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	superfamily_SSF81321
IPCEF1	26034	genome.wustl.edu	37	6	154520983	154520983	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130699.1	-1	validated	p.V243	0.024	111	0%	69	34.8%	0	-	-	-	-	NULL
SCAF8	22828	genome.wustl.edu	37	6	155131256	155131256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014892.3	+1	validated	p.S445L	1.000	180	0%	84	45.2%	20	75%	unknown(0)	deleterious(0)	-	superfamily_SSF54928
SCAF8	22828	genome.wustl.edu	37	6	155148315	155148315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014892.3	+1	validated	p.P694L	1.000	284	0%	148	55.4%	24	54.1%	benign(0.181)	tolerated(0.06)	neutral(0.339)	NULL
SCAF8	22828	genome.wustl.edu	37	6	155148352	155148352	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014892.3	+1	validated	p.T706	0.319	350	0.3%	176	35.8%	30	43.3%	-	-	-	NULL
SCAF8	22828	genome.wustl.edu	37	6	155153680	155153680	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014892.3	+1	validated	p.Q989H	0.589	55	0%	28	53.6%	23	26%	probably_damaging(0.99)	deleterious(0.03)	deleterious(0.806)	NULL
SCAF8	22828	genome.wustl.edu	37	6	155154527	155154527	+	Nonstop_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014892.3	+1	validated	p.*1272Q	1.000	71	0%	35	48.6%	34	55.8%	-	-	-	NULL
TIAM2	26230	genome.wustl.edu	37	6	155497988	155497988	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012454.3	+1	reviewed	p.D800	0.013	173	0%	107	14%	4	0%	-	-	-	NULL
ARID1B	57492	genome.wustl.edu	37	6	157510789	157510789	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017519.2	+1	validated	p.S1170	0.977	22	0%	21	47.6%	24	58.3%	-	-	-	NULL
ARID1B	57492	genome.wustl.edu	37	6	157528950	157528950	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017519.2	+1	validated	p.I2207	1.000	10	0.000	9	0.778	32	50%	-	-	-	NULL
TMEM242	729515	genome.wustl.edu	37	6	157739844	157739844	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018452.4	-1	validated	p.F99	1.000	121	0%	90	42.2%	16	43.7%	-	-	-	HMMPfam_DUF1358
SNX9	51429	genome.wustl.edu	37	6	158327225	158327225	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016224.3	+1	reviewed	p.K229R	1.000	356	0%	176	39.8%	23	30.4%	possibly_damaging(0.509)	tolerated(0.44)	neutral(0.183)	NULL
SNX9	51429	genome.wustl.edu	37	6	158330950	158330950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016224.3	+1	reviewed	p.R281Q	0.922	487	0%	325	36.6%	34	35.2%	probably_damaging(0.969)	tolerated(0.64)	neutral(0.414)	HMMPfam_PX,HMMSmart_PX,superfamily_PX
SYNJ2	8871	genome.wustl.edu	37	6	158492640	158492640	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003898.3	+1	reviewed	p.V649	1.000	9	0.000	21	0.429	17	58.8%	-	-	-	HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like
SERAC1	84947	genome.wustl.edu	37	6	158540137	158540137	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032861.3	-1	validated	p.R411H	1.000	188	0%	129	57.4%	13	38.4%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_alpha/beta-Hydrolases
TULP4	56995	genome.wustl.edu	37	6	158870180	158870180	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020245.3	+1	validated	p.T232	1.000	37	0%	35	48.6%	20	35%	-	-	-	superfamily_WD40 repeat-like
TMEM181	57583	genome.wustl.edu	37	6	159046207	159046207	+	Silent	SNP	G	G	A	rs189597784	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020823.1	+1	validated	p.A479	0.996	126	0%	145	13.1%	20	25%	-	-	-	NULL
TMEM181	57583	genome.wustl.edu	37	6	159052861	159052861	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020823.1	+1	validated	p.P594S	1.000	47	0%	35	40%	30	33.3%	possibly_damaging(0.612)	tolerated(0.08)	deleterious(0.512)	NULL
EZR	7430	genome.wustl.edu	37	6	159187951	159187951	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111077.1	-1	reviewed	p.L586M	1.000	45	0%	58	58.6%	342	57%	benign(0.005)	tolerated(1)	-	superfamily_Moesin,HMMPfam_ERM
RSPH3	83861	genome.wustl.edu	37	6	159403718	159403718	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031924.4	-1	validated	p.L307	1.000	265	0%	138	36.2%	2	100%	-	-	-	HMMPfam_Radial_spoke_3
FNDC1	84624	genome.wustl.edu	37	6	159642721	159642721	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032532.2	+1	validated	p.K253N	0.887	119	0%	74	48.6%	1	0%	unknown(0)	tolerated(0.12)	-	NULL
FNDC1	84624	genome.wustl.edu	37	6	159670157	159670157	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032532.2	+1	validated	p.A1593T	0.962	79	0%	54	55.6%	1	0%	benign(0.349)	tolerated(1)	neutral(0.111)	NULL
TCP1	6950	genome.wustl.edu	37	6	160200261	160200261	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030752.2	-1	reviewed	p.R496Q	0.974	273	0%	120	41.7%	297	37.7%	benign(0.296)	tolerated(0.27)	neutral(0.125)	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase
TCP1	6950	genome.wustl.edu	37	6	160201534	160201534	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030752.2	-1	reviewed	p.G346	1.000	376	0%	177	19.2%	271	16.2%	-	-	-	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase,superfamily_SSF52029,superfamily_SSF54849
PNLDC1	154197	genome.wustl.edu	37	6	160239686	160239686	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173516.1	+1	provisional	p.I408	1.000	17	0%	25	36%	0	-	-	-	-	NULL
SLC22A1	6580	genome.wustl.edu	37	6	160555068	160555068	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003057.2	+1	reviewed	p.A250	0.973	54	0%	49	20.4%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SLC22A2	6582	genome.wustl.edu	37	6	160668276	160668276	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003058.2	-1	reviewed	p.A299	1.000	223	0.4%	101	35.6%	0	-	-	-	-	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter
LPA	4018	genome.wustl.edu	37	6	161021992	161021992	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005577.2	-1	reviewed	p.P1028	0.000	98	0%	54	53.7%	0	-	-	-	-	superfamily_Kringle-like
PLG	5340	genome.wustl.edu	37	6	161157979	161157979	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000301.3	+1	reviewed	p.V581A	0.741	105	0%	71	47.9%	0	-	benign(0.302)	deleterious(0)	deleterious(0.538)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
MAP3K4	4216	genome.wustl.edu	37	6	161470619	161470619	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005922.2	+1	reviewed	p.E439*	0.945	151	0%	71	56.3%	10	50%	-	-	-	NULL
MAP3K4	4216	genome.wustl.edu	37	6	161522964	161522964	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005922.2	+1	reviewed	p.A1239S	1.000	166	0%	87	44.8%	21	42.8%	probably_damaging(1)	tolerated(0.75)	deleterious(0.501)	NULL
AGPAT4	56895	genome.wustl.edu	37	6	161560624	161560624	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020133.2	-1	reviewed	p.T291M	1.000	20	0%	17	35.3%	9	44.4%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	superfamily_SSF69593
LOC100129958	100129958	genome.wustl.edu	37	6	162990715	162990715	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001719102.1	+1	model	p.C301	1.000	16	0%	18	44.4%	0	-	-	-	-	NULL
PDE10A	10846	genome.wustl.edu	37	6	165809831	165809831	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130690.1	-1	validated	p.V466M	0.000	195	0%	103	49.5%	5	80%	benign(0.043)	tolerated(0.11)	neutral(0.274)	superfamily_SSF109604
PDE10A	10846	genome.wustl.edu	37	6	165843824	165843824	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130690.1	-1	validated	p.G252C	1.000	428	0%	214	38.8%	9	55.5%	probably_damaging(0.978)	tolerated(0.11)	deleterious(0.692)	HMMSmart_GAF
PDE10A	10846	genome.wustl.edu	37	6	165863792	165863792	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130690.1	-1	validated	p.R95L	1.000	423	0%	196	51%	4	50%	benign(0.063)	tolerated(0.28)	neutral(0.036)	superfamily_SSF55781
T	6862	genome.wustl.edu	37	6	166576055	166576055	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003181.2	-1	reviewed	p.P262S	0.717	73	0%	56	48.2%	0	-	benign(0.001)	tolerated(0.89)	-	NULL
RPS6KA2	6196	genome.wustl.edu	37	6	166862234	166862234	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006932.1	-1	reviewed	p.T445I	0.997	63	0%	67	44.8%	15	40%	possibly_damaging(0.686)	deleterious(0)	deleterious(0.690)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
MIR1913	100302141	genome.wustl.edu	37	6	166922861	166922861	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000411026	-1	known	NULL	0.001	17	0%	16	50%	0	-	-	-	-	-
RPS6KA2	6196	genome.wustl.edu	37	6	166952273	166952273	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006932.1	-1	reviewed	e3-1	0.999	53	0%	53	17%	0	-	-	-	-	-
UNC93A	54346	genome.wustl.edu	37	6	167717573	167717573	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018974.3	+1	validated	p.P264	0.018	95	0%	85	32.9%	0	-	-	-	-	superfamily_MFS_gen_substrate_transporter
TTLL2	83887	genome.wustl.edu	37	6	167753962	167753962	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031949.4	+1	validated	p.V192M	0.083	128	0%	110	17.3%	0	-	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like
TCP10	6953	genome.wustl.edu	37	6	167787930	167787930	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004610.3	-1	validated	p.S233*	0.003	472	0%	367	15%	0	-	-	-	-	HMMPfam_Tcp10_C
TCP10	6953	genome.wustl.edu	37	6	167794573	167794573	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000476779	-1	known	p.C105	0.000	53	0%	59	37.3%	0	-	-	-	-	NULL
MLLT4	4301	genome.wustl.edu	37	6	168348587	168348587	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040001.1	+1	validated	p.K1195R	1.000	167	0%	96	37.5%	59	42.3%	probably_damaging(0.996)	tolerated(0.27)	deleterious(0.495)	NULL
MLLT4	4301	genome.wustl.edu	37	6	168351921	168351921	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040001.1	+1	validated	p.R1288Q	0.364	138	0%	102	34.3%	51	45%	probably_damaging(0.972)	tolerated(0.13)	deleterious(0.666)	NULL
MLLT4	4301	genome.wustl.edu	37	6	168352266	168352266	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040001.1	+1	validated	p.V1403A	0.780	59	0%	56	23.2%	63	20.6%	benign(0)	tolerated(1)	-	NULL
DACT2	168002	genome.wustl.edu	37	6	168709387	168709387	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_214462.3	-1	validated	p.S350	0.000	6	0.000	10	0.600	13	61.5%	-	-	-	NULL
THBS2	7058	genome.wustl.edu	37	6	169620332	169620332	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003247.2	-1	reviewed	p.E1158K	1.000	52	0%	62	35.5%	7	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_TSP_C,superfamily_ConA_like_lec_gl
PHF10	55274	genome.wustl.edu	37	6	170118909	170118909	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018288.3	-1	reviewed	p.V100	1.000	261	0%	132	53%	45	55.5%	-	-	-	NULL
C6orf70	55780	genome.wustl.edu	37	6	170156511	170156511	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018341.1	+1	validated	p.S131	0.130	351	0%	187	38%	4	0%	-	-	-	NULL
LINC00242	401288	genome.wustl.edu	37	6	170190645	170190645	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026781.1	-1	validated	NULL	0.001	39	0%	49	34.7%	0	-	-	-	-	-
LINC00242	401288	genome.wustl.edu	37	6	170190764	170190764	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026781.1	-1	validated	NULL	0.000	13	0%	11	54.5%	0	-	-	-	-	-
LINC00574	80069	genome.wustl.edu	37	6	170201327	170201327	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026780.1	+1	validated	NULL	0.003	64	0%	99	41.4%	0	-	-	-	-	-
DLL1	28514	genome.wustl.edu	37	6	170594014	170594014	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005618.3	-1	reviewed	p.C414W	0.676	54	0%	65	49.2%	6	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
FAM120B	84498	genome.wustl.edu	37	6	170626903	170626903	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032448.1	+1	provisional	p.R142Q	0.004	49	0%	42	45.2%	6	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_PIN domain-like
FAM120B	84498	genome.wustl.edu	37	6	170627241	170627241	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032448.1	+1	provisional	p.E255*	0.000	104	0%	64	45.3%	1	100%	-	-	-	NULL
FAM120B	84498	genome.wustl.edu	37	6	170627600	170627600	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032448.1	+1	provisional	p.R374	0.000	143	0%	87	44.8%	12	50%	-	-	-	NULL
FAM120B	84498	genome.wustl.edu	37	6	170657246	170657246	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032448.1	+1	provisional	p.T675	0.810	83	0%	32	37.5%	5	80%	-	-	-	PatternScan_FGGY_KINASES_1
LOC100132858	100132858	genome.wustl.edu	37	7	19842	19842	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001715131.2	-1	model	p.G381S	0.013	512	0%	250	9.6%	0	-	-	-	-	NULL
LOC100132858	100132858	genome.wustl.edu	37	7	32979	32979	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001715131.2	-1	model	p.A164V	0.003	87	0%	119	24.4%	0	-	-	-	-	NULL
FAM20C	56975	genome.wustl.edu	37	7	195652	195652	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020223.2	+1	validated	p.R235Q	1.000	24	0%	31	83.9%	5	40%	probably_damaging(0.982)	tolerated(0.08)	deleterious(0.726)	NULL
PRKAR1B	5575	genome.wustl.edu	37	7	635852	635852	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000400758	-1	known	p.R74Q	0.503	14	0%	29	75.9%	23	56.5%	-	-	-	HMMPfam_cNMP_binding,HMMSmart_SM00100,PatternScan_CNMP_BINDING_2,superfamily_cAMP-binding domain-like
SUN1	23353	genome.wustl.edu	37	7	900018	900018	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130965.2	+1	reviewed	p.A593V	1.000	21	0%	30	26.7%	111	34.2%	possibly_damaging(0.484)	tolerated(0.06)	deleterious(0.483)	NULL
GPR146	115330	genome.wustl.edu	37	7	1098099	1098099	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138445.2	+1	provisional	p.C316	0.286	32	0%	38	23.7%	7	14.2%	-	-	-	superfamily_Family A G protein-coupled receptor-like
GPER	2852	genome.wustl.edu	37	7	1131550	1131550	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039966.1	+1	reviewed	p.S62	0.960	55	1.8%	63	66.7%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
TMEM184A	202915	genome.wustl.edu	37	7	1586653	1586654	+	In_Frame_Ins	INS	-	-	GCC	rs112463195	byCluster;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001097620.1	-1	validated	p.392in_frame_insG	0.000:0.000	-	-	-	-	-	-	-	-	-	NULL
MAD1L1	8379	genome.wustl.edu	37	7	1938025	1938025	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013836.1	-1	reviewed	p.E603	1.000	61	0%	74	16.2%	27	14.8%	-	-	-	HMMPfam_MAD
MAD1L1	8379	genome.wustl.edu	37	7	2020131	2020131	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013836.1	-1	reviewed	p.E488K	0.019	22	4.5%	24	41.7%	38	42.1%	benign(0.018)	tolerated(0.23)	neutral(0.042)	HMMPfam_MAD
MAD1L1	8379	genome.wustl.edu	37	7	2188797	2188797	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013836.1	-1	reviewed	p.V355I	0.060	47	0%	61	11.5%	24	4.1%	benign(0)	tolerated(1)	-	HMMPfam_MAD
MAD1L1	8379	genome.wustl.edu	37	7	2265071	2265071	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013836.1	-1	reviewed	p.A89S	0.996	46	0%	61	29.5%	37	32.4%	benign(0.388)	tolerated(0.06)	neutral(0.447)	HMMPfam_MAD
NUDT1	4521	genome.wustl.edu	37	7	2284282	2284282	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198949.1	+1	reviewed	p.R48*	1.000	29	0%	42	42.9%	39	0%	-	-	-	HMMPfam_NUDIX,superfamily_Nudix
SNX8	29886	genome.wustl.edu	37	7	2314785	2314785	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013321.1	-1	provisional	p.R127H	1.000	45	0%	65	27.7%	27	29.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain
CHST12	55501	genome.wustl.edu	37	7	2473386	2473386	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018641.3	+1	validated	p.R371M	1.000	11	0%	15	33.3%	49	28.5%	probably_damaging(0.972)	deleterious(0)	deleterious(0.859)	HMMPfam_Sulfotransfer_2
LFNG	3955	genome.wustl.edu	37	7	2564327	2564327	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040167.1	+1	reviewed	e2-2	1.000	4	0.000	9	0.444	2	100%	-	-	-	-
BRAT1	221927	genome.wustl.edu	37	7	2583347	2583347	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152743.2	-1	provisional	p.R227H	0.555	7	0.000	10	0.400	82	17%	benign(0.016)	tolerated(0.4)	neutral(0.017)	superfamily_ARM repeat
GNA12	2768	genome.wustl.edu	37	7	2771086	2771086	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007353.2	-1	validated	p.I292S	1.000	68	0%	70	28.6%	77	31.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_G-alpha,superfamily_SSF52540
CARD11	84433	genome.wustl.edu	37	7	2959200	2959200	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032415.3	-1	validated	p.S772	0.000	24	0%	16	37.5%	1	0%	-	-	-	NULL
CARD11	84433	genome.wustl.edu	37	7	2984022	2984022	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032415.3	-1	validated	p.R170C	0.974	20	0%	27	59.3%	0	-	possibly_damaging(0.847)	deleterious(0.05)	deleterious(0.670)	NULL
CARD11	84433	genome.wustl.edu	37	7	2987363	2987363	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032415.3	-1	validated	p.L22	0.989	132	0%	137	15.3%	0	-	-	-	-	superfamily_DEATH_like
SDK1	221935	genome.wustl.edu	37	7	4116720	4116720	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152744.3	+1	validated	p.G1034D	1.000	47	0%	66	62.1%	10	80%	probably_damaging(1)	tolerated(0.44)	deleterious(0.512)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
SDK1	221935	genome.wustl.edu	37	7	4277346	4277346	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152744.3	+1	validated	p.I2020	0.603	90	0%	112	64.3%	9	66.6%	-	-	-	NULL
PAPOLB	56903	genome.wustl.edu	37	7	4900162	4900162	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020144.4	-1	validated	p.E427G	1.000	406	0%	356	62.4%	0	-	benign(0.011)	deleterious(0.03)	neutral(0.365)	HMMPfam_PAP_RNA-bind,superfamily_PAP_C
RBAK	57786	genome.wustl.edu	37	7	5103356	5103356	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021163.3	+1	reviewed	p.R90I	0.000	175	0%	115	28.7%	13	7.6%	benign(0.349)	deleterious(0)	deleterious(0.555)	NULL
RBAK	57786	genome.wustl.edu	37	7	5104310	5104310	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021163.3	+1	reviewed	p.K408T	0.999	94	0%	65	56.9%	9	66.6%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
RBAK	57786	genome.wustl.edu	37	7	5104513	5104513	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021163.3	+1	reviewed	p.R476W	0.939	118	0%	67	37.3%	3	0%	benign(0.003)	tolerated(0.07)	neutral(0.319)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
WIPI2	26100	genome.wustl.edu	37	7	5270545	5270545	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015610.3	+1	validated	p.S444	0.163	29	0%	38	26.3%	154	30.5%	-	-	-	NULL
TNRC18	84629	genome.wustl.edu	37	7	5363878	5363878	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080495.2	-1	provisional	p.R2137C	0.008	37	0%	51	33.3%	84	27.3%	unknown(0)	-	-	NULL
TNRC18	84629	genome.wustl.edu	37	7	5410045	5410045	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080495.2	-1	provisional	p.A1394T	1.000	47	0%	48	12.5%	97	9.2%	possibly_damaging(0.842)	deleterious(0)	deleterious(0.766)	NULL
FBXL18	80028	genome.wustl.edu	37	7	5541277	5541277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024963.4	-1	validated	p.R208H	0.938	7	0.000	10	0.700	19	68.4%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
RNF216	54476	genome.wustl.edu	37	7	5752344	5752344	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207111.2	-1	reviewed	e11+2	1.000	21	0%	10	40%	1	100%	-	-	-	-
RNF216	54476	genome.wustl.edu	37	7	5780887	5780887	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207111.2	-1	reviewed	p.R254Q	1.000	93	1.1%	86	30.2%	17	5.8%	probably_damaging(0.963)	tolerated(0.41)	neutral(0.421)	NULL
AIMP2	7965	genome.wustl.edu	37	7	6063059	6063059	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006303.3	+1	validated	p.D234Y	1.000	111	0%	130	25.4%	102	35.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_GST_C_like
USP42	84132	genome.wustl.edu	37	7	6150834	6150834	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032172.2	+1	validated	p.E24K	0.978	91	0%	108	27.8%	6	33.3%	possibly_damaging(0.49)	deleterious(0.03)	deleterious(0.527)	NULL
DAGLB	221955	genome.wustl.edu	37	7	6476141	6476141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139179.3	-1	validated	p.R91W	0.975	47	0%	57	31.6%	18	27.7%	unknown(0)	deleterious(0)	-	NULL
GRID2IP	392862	genome.wustl.edu	37	7	6579485	6579485	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145118.1	-1	validated	p.D150N	1.000	15	0%	27	74.1%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
RSPH10B2	728194	genome.wustl.edu	37	7	6821021	6821021	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099697.1	+1	provisional	p.E558K	0.997	175	0%	157	49.7%	0	-	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	NULL
CCZ1B	221960	genome.wustl.edu	37	7	6863791	6863791	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198097.2	-1	predicted	p.R107W	1.000	890	0%	755	39.1%	28	57.1%	possibly_damaging(0.869)	deleterious(0.03)	deleterious(0.702)	HMMPfam_DUF2049
COL28A1	340267	genome.wustl.edu	37	7	7398304	7398304	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037763.2	-1	validated	p.N1113S	0.998	288	0.3%	122	37.7%	1	100%	benign(0.007)	tolerated(0.6)	neutral(0.004)	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like
ICA1	3382	genome.wustl.edu	37	7	8153571	8153571	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004968.2	-1	reviewed	p.H478	0.814	113	0%	85	16.5%	43	11.6%	-	-	-	HMMPfam_ICA69
LOC340268	340268	genome.wustl.edu	37	7	9766193	9766193	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_041608.1	+1	model	NULL	0.998	17	0%	22	40.9%	0	-	-	-	-	-
LOC340268	340268	genome.wustl.edu	37	7	9767790	9767790	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_041608.1	+1	model	NULL	0.984	62	0%	31	48.4%	0	-	-	-	-	-
ENSG00000248675	0	genome.wustl.edu	37	7	10490874	10490874	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000510654	-1	known	NULL	0.001	37	0%	15	46.7%	0	-	-	-	-	-
ENSG00000248675	0	genome.wustl.edu	37	7	10491838	10491838	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000510654	-1	known	NULL	0.993	46	0%	19	21.1%	0	-	-	-	-	-
THSD7A	221981	genome.wustl.edu	37	7	11446671	11446671	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015204.2	-1	validated	p.R1310	1.000	152	0%	79	43%	1	0%	-	-	-	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
THSD7A	221981	genome.wustl.edu	37	7	11581238	11581238	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015204.2	-1	validated	p.R544C	0.104	65	0%	39	28.2%	0	-	probably_damaging(0.989)	deleterious(0.04)	deleterious(0.788)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
VWDE	221806	genome.wustl.edu	37	7	12409196	12409196	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135924.1	-1	provisional	p.S912	0.670	99	0%	30	36.7%	1	100%	-	-	-	HMMSmart_SM00181,superfamily_EGF/Laminin
LOC100287584	100287584	genome.wustl.edu	37	7	12725311	12725311	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342694.1	-1	model	p.A19T	0.004	50	0%	41	46.3%	0	-	-	-	-	NULL
DGKB	1607	genome.wustl.edu	37	7	14384939	14384939	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004080.2	-1	reviewed	p.S639Y	1.000	323	0%	90	40%	0	-	benign(0)	tolerated(1)	-	HMMPfam_DAGK_acc,HMMSmart_SM00045
DGKB	1607	genome.wustl.edu	37	7	14661003	14661003	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004080.2	-1	reviewed	p.Q429H	1.000	417	0.2%	119	21%	0	-	benign(0.115)	deleterious(0.05)	neutral(0.354)	NULL
DGKB	1607	genome.wustl.edu	37	7	14741322	14741322	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004080.2	-1	reviewed	p.G167D	1.000	268	0%	128	32.8%	0	-	probably_damaging(0.973)	tolerated(0.05)	deleterious(0.760)	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
MEOX2	4223	genome.wustl.edu	37	7	15666460	15666460	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005924.4	-1	reviewed	p.E201*	1.000	910	0%	256	40.2%	0	-	-	-	-	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like
AHR	196	genome.wustl.edu	37	7	17373696	17373696	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001621.4	+1	validated	p.T289I	1.000	203	0%	88	45.5%	8	62.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain)
SNX13	23161	genome.wustl.edu	37	7	17930025	17930025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015132.4	-1	reviewed	p.R134M	1.000	240	0%	76	39.5%	10	30%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PXA,HMMSmart_SM00313
SNX13	23161	genome.wustl.edu	37	7	17931203	17931203	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015132.4	-1	reviewed	p.T95M	0.997	270	0.4%	114	39.5%	10	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SNX13	23161	genome.wustl.edu	37	7	17936981	17936981	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015132.4	-1	reviewed	p.F34C	1.000	305	0%	123	47.2%	6	33.3%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
HDAC9	9734	genome.wustl.edu	37	7	18706088	18706088	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178425.2	+1	reviewed	p.F574L	1.000	109	0%	29	48.3%	6	16.6%	benign(0.004)	tolerated(0.47)	neutral(0.011)	NULL
FERD3L	222894	genome.wustl.edu	37	7	19184631	19184631	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152898.2	-1	validated	p.E119K	1.000	38	2.6%	29	44.8%	0	-	possibly_damaging(0.559)	tolerated(0.07)	deleterious(0.510)	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
ABCB5	340273	genome.wustl.edu	37	7	20682910	20682910	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000404938	+1	known	p.R140*	1.000	183	0%	66	45.5%	0	-	-	-	-	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
SP4	6671	genome.wustl.edu	37	7	21468386	21468386	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003112.3	+1	validated	p.K33N	1.000	103	0%	94	37.2%	2	100%	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	NULL
SP4	6671	genome.wustl.edu	37	7	21469838	21469838	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003112.3	+1	validated	p.A352D	1.000	40	0%	30	53.3%	4	50%	benign(0.042)	tolerated(0.56)	neutral(0.009)	NULL
DNAH11	8701	genome.wustl.edu	37	7	21641062	21641062	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003777.3	+1	reviewed	p.Q1158	0.300	196	0%	63	46%	1	0%	-	-	-	NULL
DNAH11	8701	genome.wustl.edu	37	7	21646327	21646327	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003777.3	+1	reviewed	p.E1276D	0.426	297	0%	134	50%	0	-	benign(0.001)	tolerated(0.48)	neutral(0.011)	NULL
DNAH11	8701	genome.wustl.edu	37	7	21654843	21654843	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003777.3	+1	reviewed	p.E1322*	1.000	414	0.2%	162	41.4%	2	50%	-	-	-	HMMPfam_DHC_N2
DNAH11	8701	genome.wustl.edu	37	7	21678629	21678629	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003777.3	+1	reviewed	p.F1635	1.000	380	0%	164	41.5%	2	100%	-	-	-	HMMPfam_DHC_N2
DNAH11	8701	genome.wustl.edu	37	7	21760399	21760399	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003777.3	+1	reviewed	p.S2404	0.996	376	0%	152	45.4%	0	-	-	-	-	NULL
DNAH11	8701	genome.wustl.edu	37	7	21778401	21778401	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003777.3	+1	reviewed	p.D2583	0.972	255	0%	101	44.6%	1	0%	-	-	-	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH11	8701	genome.wustl.edu	37	7	21901567	21901567	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003777.3	+1	reviewed	p.A3774T	0.579	61	0%	28	35.7%	0	-	benign(0.028)	tolerated(0.54)	neutral(0.009)	NULL
CDCA7L	55536	genome.wustl.edu	37	7	21942620	21942620	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018719.4	-1	validated	p.D437V	0.969	165	0%	89	34.8%	22	50%	unknown(0)	-	-	HMMPfam_zf-4CXXC_R1
MPP6	51678	genome.wustl.edu	37	7	24689345	24689345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016447.2	+1	provisional	p.R129C	1.000	251	0%	102	44.1%	2	50%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_PDZ domain-like
MPP6	51678	genome.wustl.edu	37	7	24720039	24720039	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016447.2	+1	provisional	p.F449C	1.000	270	0%	112	36.6%	6	33.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Guanylate_kin,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
C7orf31	136895	genome.wustl.edu	37	7	25182387	25182387	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138811.3	-1	validated	p.P244H	1.000	425	0%	182	20.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
HNRNPA2B1	3181	genome.wustl.edu	37	7	26233223	26233223	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031243.2	-1	reviewed	p.Y283	1.000	210	0%	99	47.5%	586	44.1%	unknown(0)	-	-	NULL
HOXA6	3203	genome.wustl.edu	37	7	27186944	27186944	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024014.2	-1	reviewed	p.R142Q	1.000	35	0%	28	46.4%	5	20%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
ENSG00000248357	0	genome.wustl.edu	37	7	27497773	27497773	+	RNA	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000506075	+1	novel	NULL	0.986	24	0%	20	40%	9	0%	-	-	-	-
WIPF3	644150	genome.wustl.edu	37	7	29928929	29928929	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000242140	+1	known	p.F419	0.997	194	0%	152	34.9%	6	50%	-	-	-	NULL
SCRN1	9805	genome.wustl.edu	37	7	29983741	29983741	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000427249	-1	known	p.L169I	0.811	183	0.5%	103	43.7%	44	54.5%	-	-	-	NULL
PLEKHA8	84725	genome.wustl.edu	37	7	30084784	30084784	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032639.2	+1	provisional	p.G42W	1.000	246	0%	117	40.2%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
PLEKHA8	84725	genome.wustl.edu	37	7	30090049	30090049	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032639.2	+1	provisional	e6-1	1.000	362	0%	122	37.7%	0	-	-	-	-	-
C7orf41	222166	genome.wustl.edu	37	7	30197108	30197108	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152793.2	+1	validated	p.V114M	0.999	91	0%	49	18.4%	11	18.1%	benign(0.003)	deleterious(0)	neutral(0.445)	NULL
NOD1	10392	genome.wustl.edu	37	7	30486650	30486650	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006092.2	-1	reviewed	p.I768V	1.000	160	0%	96	36.5%	4	75%	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	superfamily_SSF52047
GGCT	79017	genome.wustl.edu	37	7	30540215	30540215	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024051.2	-1	provisional	p.P75H	1.000	355	0%	196	49%	37	29.7%	possibly_damaging(0.78)	deleterious(0.03)	deleterious(0.656)	HMMPfam_AIG2,superfamily_BtrG-like (Pfam 03674)
FAM188B	84182	genome.wustl.edu	37	7	30868348	30868348	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032222.2	+1	validated	p.R376L	0.252	72	0%	57	42.1%	2	0%	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
NEUROD6	63974	genome.wustl.edu	37	7	31378458	31378458	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022728.2	-1	provisional	p.Y142C	1.000	218	0%	154	37%	0	-	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
NEUROD6	63974	genome.wustl.edu	37	7	31378582	31378582	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022728.2	-1	provisional	p.A101T	0.999	455	0%	365	43%	0	-	benign(0)	tolerated(0.06)	neutral(0.323)	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
CCDC129	223075	genome.wustl.edu	37	7	31683217	31683217	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194300.2	+1	validated	p.A745T	0.000	72	0%	22	40.9%	0	-	benign(0)	tolerated(1)	-	NULL
PDE1C	5137	genome.wustl.edu	37	7	31862831	31862831	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005020.1	-1	provisional	p.R480*	1.000	58	0%	30	36.7%	0	-	-	-	-	superfamily_SSF109604
BMPER	168667	genome.wustl.edu	37	7	33976921	33976921	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133468.3	+1	validated	p.K80	1.000	70	0%	40	55%	0	-	-	-	-	HMMSmart_VWC,PatternScan_VWFC_1
BMPER	168667	genome.wustl.edu	37	7	34192863	34192863	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133468.3	+1	validated	p.P679L	1.000	41	0%	29	13.8%	0	-	probably_damaging(0.989)	tolerated(0.12)	deleterious(0.700)	superfamily_Cysrich_TIL,HMMPfam_TIL
HERPUD2	64224	genome.wustl.edu	37	7	35709898	35709898	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022373.4	-1	validated	p.R89Q	1.000	280	0%	121	40.5%	9	44.4%	possibly_damaging(0.847)	deleterious(0.02)	deleterious(0.708)	HMMPfam_ubiquitin,superfamily_SSF54236
EEPD1	80820	genome.wustl.edu	37	7	36194795	36194795	+	Missense_Mutation	SNP	A	A	G	rs111452772		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030636.2	+1	validated	p.T288A	1.000	24	0%	20	40%	12	66.6%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_Exo_endo_phos,superfamily_DNase I-like
EEPD1	80820	genome.wustl.edu	37	7	36336701	36336701	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030636.2	+1	validated	p.A472V	0.032	163	0%	117	40.2%	13	23%	benign(0)	tolerated(0.36)	neutral(0.020)	HMMPfam_Exo_endo_phos,superfamily_DNase I-like
ANLN	54443	genome.wustl.edu	37	7	36445793	36445793	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018685.2	+1	validated	p.D164V	0.906	54	0%	21	28.6%	19	57.8%	benign(0.012)	tolerated(0.2)	neutral(0.050)	NULL
AOAH	313	genome.wustl.edu	37	7	36579931	36579931	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001637.3	-1	reviewed	p.P434S	1.000	123	0%	49	38.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Lipase_GDSL,superfamily_Esterase_SGNH_hydro-type
AOAH	313	genome.wustl.edu	37	7	36713549	36713549	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001637.3	-1	reviewed	p.L97	1.000	367	0%	175	50.9%	1	0%	-	-	-	HMMPfam_SapB_2,HMMSmart_SapB,superfamily_Saposin_like
AOAH	313	genome.wustl.edu	37	7	36763722	36763722	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001637.3	-1	reviewed	p.A11V	0.000	42	0%	27	33.3%	0	-	unknown(0)	deleterious(0)	-	NULL
ELMO1	9844	genome.wustl.edu	37	7	37262259	37262259	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000433246	-1	known	p.L12S	0.930	176	0%	81	53.1%	6	33.3%	-	-	-	NULL
TXNDC3	51314	genome.wustl.edu	37	7	37924015	37924015	+	Missense_Mutation	SNP	G	G	T	rs111988623		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016616.4	+1	reviewed	p.D369Y	0.993	202	0%	73	52.1%	0	-	possibly_damaging(0.904)	deleterious(0)	deleterious(0.803)	HMMSmart_NDK,superfamily_NDK
TXNDC3	51314	genome.wustl.edu	37	7	37936638	37936638	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016616.4	+1	reviewed	p.A571T	0.000	165	0%	47	48.9%	0	-	benign(0)	tolerated(0.62)	neutral(0.004)	HMMPfam_NDK,HMMSmart_NDK,superfamily_NDK
SFRP4	6424	genome.wustl.edu	37	7	37951727	37951727	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003014.3	-1	reviewed	p.R262H	1.000	129	0%	92	41.3%	6	0%	benign(0.167)	deleterious(0)	neutral(0.460)	superfamily_TIMP_like,HMMPfam_NTR,HMMSmart_C345C
AMPH	273	genome.wustl.edu	37	7	38431466	38431466	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441628	-1	known	p.A470T	0.848	41	0%	30	36.7%	4	50%	-	-	-	NULL
AMPH	273	genome.wustl.edu	37	7	38433732	38433732	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001635.2	-1	reviewed	p.A494V	0.759	31	0%	31	32.3%	3	66.6%	benign(0.248)	tolerated(0.24)	neutral(0.062)	NULL
POU6F2	11281	genome.wustl.edu	37	7	39125562	39125562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007252.3	+1	reviewed	p.E41K	1.000	100	0%	51	35.3%	0	-	possibly_damaging(0.653)	deleterious(0.02)	deleterious(0.613)	NULL
POU6F2	11281	genome.wustl.edu	37	7	39500223	39500223	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007252.3	+1	reviewed	p.R494W	1.000	39	0%	28	60.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,superfamily_lambda repressor-like DNA-binding domains
ENSG00000249078	0	genome.wustl.edu	37	7	39894066	39894066	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000507268	+1	known	NULL	0.000	387	0%	251	42.6%	12	0%	-	-	-	-
CDK13	8621	genome.wustl.edu	37	7	40127819	40127819	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003718.4	+1	reviewed	p.A1042S	1.000	109	0%	65	12.3%	15	6.6%	possibly_damaging(0.888)	tolerated(0.06)	deleterious(0.670)	superfamily_Protein kinase-like (PK-like)
CDK13	8621	genome.wustl.edu	37	7	40132607	40132607	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003718.4	+1	reviewed	p.S1153	0.976	154	0%	73	34.2%	25	40%	-	-	-	NULL
CDK13	8621	genome.wustl.edu	37	7	40133791	40133791	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003718.4	+1	reviewed	p.R1251W	0.703	66	0%	42	54.8%	39	43.5%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
CDK13	8621	genome.wustl.edu	37	7	40133977	40133977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003718.4	+1	reviewed	p.D1313N	1.000	144	0%	82	41.5%	32	31.2%	possibly_damaging(0.475)	tolerated(0.12)	neutral(0.417)	NULL
MPLKIP	136647	genome.wustl.edu	37	7	40173858	40173858	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138701.3	-1	reviewed	p.Y103*	1.000	18	0%	15	53.3%	64	65.6%	-	-	-	NULL
C7orf10	79783	genome.wustl.edu	37	7	40356435	40356435	+	Missense_Mutation	SNP	G	G	A	rs190351996	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024728.1	+1	provisional	p.G236D	0.994	162	0.6%	65	36.9%	1	0%	possibly_damaging(0.659)	deleterious(0.01)	deleterious(0.638)	HMMPfam_CoA_transf_3,superfamily_CoA-Trfase_fam_III
INHBA	3624	genome.wustl.edu	37	7	41729601	41729601	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002192.2	-1	reviewed	p.R310W	1.000	35	0%	33	30.3%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
INHBA	3624	genome.wustl.edu	37	7	41729775	41729775	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002192.2	-1	reviewed	p.A252T	1.000	28	0%	34	32.4%	1	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_TGFb_propeptide
HECW1	23072	genome.wustl.edu	37	7	43351633	43351633	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015052.3	+1	validated	p.W100L	1.000	56	0%	41	34.1%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
HECW1	23072	genome.wustl.edu	37	7	43436461	43436461	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015052.3	+1	validated	p.R202W	0.999	261	0.4%	109	48.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HECW1	23072	genome.wustl.edu	37	7	43580859	43580859	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015052.3	+1	validated	p.L1373M	1.000	124	0%	82	30.5%	0	-	probably_damaging(0.977)	deleterious(0.05)	deleterious(0.764)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
MRPS24	64951	genome.wustl.edu	37	7	43906355	43906355	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032014.2	-1	validated	p.C149	1.000	57	0%	47	59.6%	281	47.6%	-	-	-	NULL
URGCP	55665	genome.wustl.edu	37	7	43918101	43918101	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077663.1	-1	validated	p.G321R	1.000	48	0%	44	27.3%	16	18.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
URGCP	55665	genome.wustl.edu	37	7	43918223	43918223	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077663.1	-1	validated	p.N280S	0.997	21	0%	18	27.8%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
UBE2D4	51619	genome.wustl.edu	37	7	43990205	43990205	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015983.2	+1	provisional	p.L104	1.000	106	0%	61	36.1%	9	55.5%	-	-	-	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
AEBP1	165	genome.wustl.edu	37	7	44151764	44151764	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129.3	+1	reviewed	p.A687	0.000	55	0%	56	35.7%	24	0%	-	-	-	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
CAMK2B	816	genome.wustl.edu	37	7	44259689	44259689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001220.4	-1	reviewed	p.S658L	1.000	13	0%	11	54.5%	1	100%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_CaMKII_AD,superfamily_SSF54427
NPC1L1	29881	genome.wustl.edu	37	7	44556414	44556414	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013389.2	-1	reviewed	p.R1163H	1.000	36	0%	26	38.5%	0	-	benign(0.089)	tolerated(0.56)	neutral(0.013)	HMMPfam_Patched,superfamily_SSF82866
DDX56	54606	genome.wustl.edu	37	7	44609492	44609492	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019082.2	-1	reviewed	p.A379T	1.000	58	0%	55	38.2%	82	46.3%	probably_damaging(0.974)	deleterious(0.01)	deleterious(0.822)	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZMIZ2	83637	genome.wustl.edu	37	7	44806140	44806140	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031449.3	+1	validated	p.R845W	0.997	21	0%	16	56.2%	77	41.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MYO1G	64005	genome.wustl.edu	37	7	45010464	45010464	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033054.2	-1	validated	p.E347	1.000	12	0%	19	73.7%	3	0%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
CCM2	83605	genome.wustl.edu	37	7	45104116	45104116	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029835.2	+1	reviewed	p.L136	1.000	12	0%	20	25%	40	15%	-	-	-	NULL
NACAD	23148	genome.wustl.edu	37	7	45121879	45121879	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000490531	-1	known	p.R1296H	0.000	15	0%	17	47.1%	2	0%	-	-	-	NULL
ADCY1	107	genome.wustl.edu	37	7	45699689	45699689	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021116.2	+1	reviewed	p.Y452	0.997	172	0%	125	42.4%	7	28.5%	-	-	-	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
ADCY1	107	genome.wustl.edu	37	7	45701798	45701798	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021116.2	+1	reviewed	p.C530	0.812	43	0%	41	43.9%	1	100%	-	-	-	NULL
ADCY1	107	genome.wustl.edu	37	7	45725707	45725707	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021116.2	+1	reviewed	p.P740	0.246	54	0%	30	33.3%	1	0%	-	-	-	NULL
ADCY1	107	genome.wustl.edu	37	7	45743334	45743334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021116.2	+1	reviewed	p.D903N	1.000	29	0%	26	50%	0	-	possibly_damaging(0.739)	deleterious(0.01)	deleterious(0.676)	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
IGFBP3	3486	genome.wustl.edu	37	7	45957006	45957006	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013398.1	-1	reviewed	p.A152T	0.000	57	0%	48	52.1%	72	13.8%	benign(0.001)	tolerated(0.65)	neutral(0.003)	NULL
TNS3	64759	genome.wustl.edu	37	7	47342588	47342588	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022748.10	-1	validated	p.P1139	0.001	20	0%	21	47.6%	20	35%	-	-	-	NULL
C7orf65	401335	genome.wustl.edu	37	7	47698354	47698354	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123065.1	+1	validated	p.R45I	0.001	105	0%	54	53.7%	0	-	unknown(0)	-	-	NULL
PKD1L1	168507	genome.wustl.edu	37	7	47842840	47842840	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138295.2	-1	reviewed	p.R2644C	0.000	123	0%	73	42.5%	0	-	benign(0.008)	tolerated(0.11)	neutral(0.272)	HMMPfam_PKD_channel
PKD1L1	168507	genome.wustl.edu	37	7	47876602	47876602	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138295.2	-1	reviewed	p.T1954A	0.979	19	0%	23	43.5%	0	-	probably_damaging(0.99)	tolerated(0.44)	neutral(0.454)	NULL
PKD1L1	168507	genome.wustl.edu	37	7	47879153	47879153	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138295.2	-1	reviewed	p.T1887M	0.007	6	0.000	5	0.800	0	-	possibly_damaging(0.877)	tolerated(0.05)	deleterious(0.687)	HMMPfam_PLAT,HMMSmart_SM00308,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)
PKD1L1	168507	genome.wustl.edu	37	7	47924213	47924213	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138295.2	-1	reviewed	p.S1083L	0.006	257	0%	124	52.4%	0	-	probably_damaging(0.959)	deleterious(0.01)	deleterious(0.808)	NULL
PKD1L1	168507	genome.wustl.edu	37	7	47937618	47937618	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138295.2	-1	reviewed	p.T746	0.040	68	0%	58	13.8%	1	100%	-	-	-	HMMPfam_REJ
PKD1L1	168507	genome.wustl.edu	37	7	47976473	47976473	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138295.2	-1	reviewed	p.A123V	0.000	275	0%	182	33.5%	0	-	benign(0)	-	-	NULL
C7orf57	136288	genome.wustl.edu	37	7	48089549	48089549	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100159.1	+1	validated	p.G194*	0.013	30	0%	26	46.2%	0	-	-	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48682925	48682925	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152701.3	+1	reviewed	p.E4960A	0.045	374	0%	129	38.8%	0	-	benign(0.394)	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48682991	48682991	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152701.3	+1	reviewed	e60+2	1.000	310	0%	119	27.7%	0	-	-	-	-	-
VWC2	375567	genome.wustl.edu	37	7	49951736	49951736	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198570.3	+1	reviewed	p.I311	0.102	37	0%	27	48.1%	0	-	-	-	-	NULL
IKZF1	10320	genome.wustl.edu	37	7	50444351	50444351	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000331340	+1	known	p.G94A	1.000	165	0%	113	37.2%	1	0%	probably_damaging(1)	tolerated(0.42)	deleterious(0.514)	NULL
IKZF1	10320	genome.wustl.edu	37	7	50444451	50444451	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006060.3	+1	validated	p.S74L	1.000	85	0%	56	42.9%	0	-	-	-	-	NULL
GRB10	2887	genome.wustl.edu	37	7	50685831	50685831	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005311.4	-1	reviewed	p.F261L	1.000	121	0%	82	43.9%	0	-	benign(0.035)	tolerated(0.18)	neutral(0.058)	NULL
COBL	23242	genome.wustl.edu	37	7	51203910	51203910	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015198.3	-1	validated	p.R301Q	0.993	41	0%	36	50%	4	25%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_Cobl
POM121L12	285877	genome.wustl.edu	37	7	53104142	53104142	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182595.3	+1	validated	p.A260T	0.000	13	0%	11	36.4%	0	-	benign(0.15)	tolerated(0.07)	neutral(0.332)	NULL
VSTM2A	222008	genome.wustl.edu	37	7	54617712	54617712	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182546.2	+1	validated	p.E161D	1.000	44	0%	45	15.6%	0	-	probably_damaging(0.98)	deleterious(0.02)	deleterious(0.807)	NULL
EGFR	1956	genome.wustl.edu	37	7	55241718	55241718	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005228.3	+1	reviewed	p.A722	0.377	66	0%	45	46.7%	8	87.5%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP
ZNF713	349075	genome.wustl.edu	37	7	56007478	56007478	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182633.1	+1	provisional	p.E358K	0.571	91	0%	56	42.9%	9	66.6%	benign(0.101)	tolerated(0.7)	neutral(0.009)	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
CCT6A	908	genome.wustl.edu	37	7	56125722	56125722	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001762.3	+1	reviewed	p.R217	0.988	89	0%	66	47%	173	49.1%	-	-	-	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase,superfamily_SSF52029,superfamily_SSF54849
SUMF2	25870	genome.wustl.edu	37	7	56140716	56140716	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130069.1	+1	reviewed	p.R103Q	0.998	405	0.2%	253	45.5%	49	40.8%	unknown(0)	-	-	HMMPfam_DUF323
PHKG1	5260	genome.wustl.edu	37	7	56148986	56148986	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006213.3	-1	reviewed	p.A309T	0.062	6	0.000	9	0.556	1	0%	benign(0.148)	deleterious(0)	neutral(0.458)	superfamily_Protein kinase-like (PK-like)
ZNF479	90827	genome.wustl.edu	37	7	57188172	57188172	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033273.1	-1	provisional	p.R317I	0.617	87	0%	26	15.4%	0	-	benign(0)	tolerated(0.34)	neutral(0.023)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF679	168417	genome.wustl.edu	37	7	63720700	63720700	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153363.2	+1	validated	p.E47D	0.916	344	0%	99	36.4%	0	-	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF679	168417	genome.wustl.edu	37	7	63727135	63727135	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153363.2	+1	validated	p.T375N	1.000	140	0%	43	48.8%	0	-	possibly_damaging(0.918)	deleterious(0)	deleterious(0.813)	superfamily_C2H2 and C2HC zinc fingers
ZNF107	51427	genome.wustl.edu	37	7	64167324	64167324	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013746.1	+1	validated	p.K214	1.000	72	0%	26	42.3%	2	100%	-	-	-	superfamily_SSF57667
ZNF107	51427	genome.wustl.edu	37	7	64168034	64168034	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013746.1	+1	validated	p.Q451R	0.001	67	0%	25	52%	5	20%	benign(0.003)	tolerated(0.4)	neutral(0.016)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF107	51427	genome.wustl.edu	37	7	64168145	64168145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013746.1	+1	validated	p.R488I	0.998	70	0%	25	44%	4	50%	benign(0.01)	tolerated(0.15)	neutral(0.241)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF107	51427	genome.wustl.edu	37	7	64168224	64168224	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013746.1	+1	validated	p.H514	0.057	117	0%	37	35.1%	9	66.6%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF107	51427	genome.wustl.edu	37	7	64168432	64168432	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013746.1	+1	validated	p.E584*	0.014	112	0%	38	10.5%	6	0%	-	-	-	superfamily_SSF57667
ZNF107	51427	genome.wustl.edu	37	7	64168542	64168542	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013746.1	+1	validated	p.F620L	0.000	57	1.8%	35	34.3%	7	28.5%	unknown(0)	tolerated(0.68)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ERV3-1	2086	genome.wustl.edu	37	7	64453369	64453369	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007253.3	-1	reviewed	p.F12L	0.788	42	0%	20	55%	9	22.2%	unknown(0)	deleterious(0)	-	NULL
ZNF92	168374	genome.wustl.edu	37	7	64853769	64853769	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152626.2	+1	validated	p.E61K	0.976	386	0%	196	45.4%	8	37.5%	benign(0.092)	tolerated(0.07)	neutral(0.326)	HMMSmart_SM00349
VKORC1L1	154807	genome.wustl.edu	37	7	65419170	65419170	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173517.3	+1	validated	p.F138L	1.000	78	0%	42	40.5%	38	44.7%	possibly_damaging(0.907)	tolerated(0.09)	deleterious(0.657)	HMMPfam_VKOR,HMMSmart_VKc
GUSB	2990	genome.wustl.edu	37	7	65426047	65426047	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000181.3	-1	reviewed	p.P598L	0.990	68	0%	56	50%	85	48.2%	benign(0.003)	tolerated(0.11)	neutral(0.272)	HMMPfam_Glyco_hydro_2_C,superfamily_(Trans)glycosidases
C7orf42	55069	genome.wustl.edu	37	7	66410084	66410084	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017994.4	+1	validated	p.A94V	1.000	70	0%	37	45.9%	44	45.4%	benign(0.024)	deleterious(0.04)	neutral(0.350)	NULL
SBDS	51119	genome.wustl.edu	37	7	66460318	66460318	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016038.2	-1	reviewed	p.I29	1.000	29	0%	21	57.1%	56	57.1%	-	-	-	HMMPfam_SBDS,superfamily_FYSH domain
AUTS2	26053	genome.wustl.edu	37	7	70229839	70229839	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015570.2	+1	validated	p.S439N	1.000	41	0%	40	17.5%	19	15.7%	possibly_damaging(0.907)	tolerated(0.25)	neutral(0.397)	NULL
AUTS2	26053	genome.wustl.edu	37	7	70255895	70255895	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015570.2	+1	validated	p.P1231	0.053	24	0%	15	73.3%	25	52%	-	-	-	NULL
WBSCR17	64409	genome.wustl.edu	37	7	70885902	70885902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022479.1	+1	reviewed	p.P258L	1.000	29	0%	20	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
POM121	9883	genome.wustl.edu	37	7	72413793	72413793	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172020.1	+1	reviewed	p.S822	0.000	16	0%	14	42.9%	21	4.7%	-	-	-	NULL
BAZ1B	9031	genome.wustl.edu	37	7	72892541	72892541	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032408.3	-1	validated	p.S417F	0.985	187	0%	113	38.9%	13	30.7%	benign(0.396)	tolerated(0.19)	neutral(0.176)	NULL
BAZ1B	9031	genome.wustl.edu	37	7	72903722	72903722	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032408.3	-1	validated	e6-1	1.000	160	0%	100	38%	0	-	-	-	-	-
TBL2	26608	genome.wustl.edu	37	7	72985012	72985012	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012453.2	-1	reviewed	p.S390F	1.000	13	0%	20	60%	64	43.7%	probably_damaging(0.963)	deleterious(0.02)	deleterious(0.788)	HMMSmart_WD40,superfamily_WD40_like
TBL2	26608	genome.wustl.edu	37	7	72987672	72987672	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012453.2	-1	reviewed	p.I192	1.000	81	0%	91	13.2%	58	1.7%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
WBSCR22	114049	genome.wustl.edu	37	7	73106928	73106928	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000420399	+1	known	p.S122F	0.330	56	0%	39	51.3%	99	51.5%	unknown(0)	-	-	NULL
LIMK1	3984	genome.wustl.edu	37	7	73513390	73513390	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002314.2	+1	reviewed	p.T144A	1.000	10	0%	18	33.3%	66	40.9%	probably_damaging(0.986)	tolerated(0.32)	neutral(0.459)	NULL
LAT2	7462	genome.wustl.edu	37	7	73638512	73638512	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014146.3	+1	reviewed	p.S205P	0.232	30	0%	22	18.2%	5	0%	probably_damaging(0.991)	tolerated(0.15)	deleterious(0.685)	NULL
RFC2	5982	genome.wustl.edu	37	7	73654382	73654382	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000497430	-1	known	p.D49N	1.000	39	0%	38	13.2%	60	6.6%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
RFC2	5982	genome.wustl.edu	37	7	73657547	73657547	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181471.1	-1	reviewed	p.R155M	1.000	161	0%	112	48.2%	73	63%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
CLIP2	7461	genome.wustl.edu	37	7	73774561	73774561	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003388.4	+1	reviewed	p.V424	0.775	21	0%	38	34.2%	8	37.5%	-	-	-	NULL
GTF2IRD1	9569	genome.wustl.edu	37	7	73933876	73933876	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016328.1	+1	reviewed	p.A248V	0.010	16	0%	10	60%	28	46.4%	possibly_damaging(0.832)	tolerated(0.47)	neutral(0.328)	NULL
GTF2I	2969	genome.wustl.edu	37	7	74105416	74105416	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032999.2	+1	reviewed	p.D71Y	1.000	145	0%	123	37.4%	30	46.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LOC100132585	100132585	genome.wustl.edu	37	7	74326954	74326954	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001722111.2	-1	model	p.L131M	0.261	552	0%	363	25.1%	0	-	-	-	-	NULL
POM121C	100101267	genome.wustl.edu	37	7	75048604	75048604	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099415.1	-1	validated	p.F955	0.142	36	0%	13	61.5%	32	43.7%	-	-	-	NULL
HIP1	3092	genome.wustl.edu	37	7	75171258	75171258	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005338.4	-1	reviewed	p.R978C	1.000	121	0%	79	35.4%	10	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_I_LWEQ,HMMSmart_SM00307
HIP1	3092	genome.wustl.edu	37	7	75184733	75184733	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005338.4	-1	reviewed	p.C650	0.952	29	0%	20	50%	8	25%	-	-	-	NULL
HIP1	3092	genome.wustl.edu	37	7	75191402	75191402	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005338.4	-1	reviewed	p.Q365E	1.000	199	0%	104	37.5%	8	62.5%	possibly_damaging(0.888)	tolerated(0.24)	neutral(0.385)	NULL
RHBDD2	57414	genome.wustl.edu	37	7	75511299	75511299	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040456.1	+1	validated	p.A111T	0.994	88	0%	56	17.9%	141	15.6%	possibly_damaging(0.509)	deleterious(0.04)	deleterious(0.519)	HMMPfam_Rhomboid
ZP3	7784	genome.wustl.edu	37	7	76071161	76071161	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001110354.1	+1	reviewed	p.T355A	0.980	254	0.4%	114	41.2%	47	21.2%	benign(0.222)	tolerated(0.61)	neutral(0.026)	NULL
LOC100288807	100288807	genome.wustl.edu	37	7	76689774	76689774	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342739.1	-1	model	p.T19R	0.013	82	0%	37	40.5%	1	0%	-	-	-	NULL
CCDC146	57639	genome.wustl.edu	37	7	76866337	76866337	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020879.2	+1	validated	p.A77V	0.572	134	0%	65	50.8%	0	-	benign(0.01)	tolerated(0.1)	neutral(0.287)	NULL
PTPN12	5782	genome.wustl.edu	37	7	77227175	77227175	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002835.3	+1	reviewed	p.R170K	1.000	338	0%	140	40.7%	33	42.4%	probably_damaging(0.997)	tolerated(0.59)	deleterious(0.471)	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
PTPN12	5782	genome.wustl.edu	37	7	77240311	77240311	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002835.3	+1	reviewed	p.K296T	1.000	429	0%	251	44.6%	45	51.1%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	superfamily_SSF52799
RSBN1L	222194	genome.wustl.edu	37	7	77408007	77408007	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441514	+1	known	p.Y159*	0.999	140	0%	69	33.3%	32	21.8%	-	-	-	NULL
PHTF2	57157	genome.wustl.edu	37	7	77569504	77569504	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127357.1	+1	validated	p.G508D	1.000	521	0%	260	44.6%	11	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MAGI2	9863	genome.wustl.edu	37	7	77756687	77756687	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012301.3	-1	reviewed	p.R1084*	1.000	95	0%	66	54.5%	0	-	-	-	-	NULL
MAGI2	9863	genome.wustl.edu	37	7	77885458	77885458	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012301.3	-1	reviewed	p.F617L	1.000	51	0%	42	47.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00228,superfamily_PDZ domain-like
GNAT3	346562	genome.wustl.edu	37	7	80117912	80117912	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102386.1	-1	provisional	p.I81T	1.000	382	0%	98	49%	0	-	possibly_damaging(0.792)	deleterious(0)	deleterious(0.742)	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
CD36	948	genome.wustl.edu	37	7	80303300	80303300	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000072.3	+1	reviewed	p.T419I	1.000	248	0%	90	37.8%	1	0%	possibly_damaging(0.807)	deleterious(0)	deleterious(0.748)	HMMPfam_CD36
CACNA2D1	781	genome.wustl.edu	37	7	81746370	81746370	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000722.2	-1	reviewed	p.I172	1.000	247	0%	84	46.4%	6	50%	-	-	-	HMMPfam_VWA_N
PCLO	27445	genome.wustl.edu	37	7	82579619	82579619	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033026.5	-1	validated	p.N3429D	0.232	299	0%	123	40.7%	3	33.3%	benign(0.073)	-	-	NULL
PCLO	27445	genome.wustl.edu	37	7	82580538	82580538	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033026.5	-1	validated	p.H3122	0.234	88	0%	60	18.3%	1	0%	-	-	-	NULL
PCLO	27445	genome.wustl.edu	37	7	82581556	82581556	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033026.5	-1	validated	p.S2905P	1.000	165	0%	75	57.3%	1	0%	possibly_damaging(0.803)	-	-	NULL
PCLO	27445	genome.wustl.edu	37	7	82584232	82584232	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033026.5	-1	validated	p.E2013*	1.000	94	0%	41	36.6%	0	-	-	-	-	NULL
PCLO	27445	genome.wustl.edu	37	7	82586186	82586186	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033026.5	-1	validated	p.S1361	1.000	109	0%	62	50%	0	-	-	-	-	NULL
PCLO	27445	genome.wustl.edu	37	7	82785344	82785344	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033026.5	-1	validated	p.G205*	0.481	589	0%	397	38.3%	0	-	-	-	-	NULL
SEMA3D	223117	genome.wustl.edu	37	7	84644455	84644455	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152754.2	-1	validated	p.C541	1.000	84	0%	24	37.5%	14	42.8%	-	-	-	HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold
KIAA1324L	222223	genome.wustl.edu	37	7	86537818	86537818	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142749.2	-1	validated	p.E801K	1.000	583	0%	143	28.7%	3	33.3%	benign(0.003)	tolerated(0.52)	neutral(0.009)	superfamily_Mannose 6-phosphate receptor domain
DMTF1	9988	genome.wustl.edu	37	7	86813855	86813855	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142327.1	+1	reviewed	p.C321	1.000	94	0%	40	27.5%	18	50%	-	-	-	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding
ABCB4	5244	genome.wustl.edu	37	7	87073033	87073033	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018849.2	-1	reviewed	p.G392	0.933	416	0%	163	47.2%	0	-	-	-	-	NULL
ABCB4	5244	genome.wustl.edu	37	7	87082356	87082356	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018849.2	-1	reviewed	p.R147M	0.011	143	0%	55	43.6%	0	-	benign(0.002)	tolerated(0.21)	neutral(0.044)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCB1	5243	genome.wustl.edu	37	7	87179353	87179353	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000927.3	-1	reviewed	p.Q456H	1.000	124	0%	65	47.7%	2	0%	benign(0.001)	tolerated(0.74)	neutral(0.002)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
RUNDC3B	154661	genome.wustl.edu	37	7	87407141	87407141	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138290.2	+1	validated	p.R293*	1.000	221	0%	61	41%	0	-	-	-	-	NULL
RUNDC3B	154661	genome.wustl.edu	37	7	87407146	87407146	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138290.2	+1	validated	p.E294D	1.000	223	0%	62	37.1%	1	100%	probably_damaging(0.995)	tolerated(0.1)	deleterious(0.744)	NULL
DBF4	10926	genome.wustl.edu	37	7	87537317	87537317	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006716.3	+1	validated	p.F622L	1.000	156	0%	56	46.4%	22	40.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ADAM22	53616	genome.wustl.edu	37	7	87704973	87704973	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021723.2	+1	reviewed	p.H119R	0.994	491	0%	201	47.8%	2	100%	possibly_damaging(0.63)	tolerated(0.06)	deleterious(0.542)	HMMPfam_Pep_M12B_propep
STEAP4	79689	genome.wustl.edu	37	7	87910241	87910241	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024636.2	-1	validated	p.R380*	1.000	222	0%	72	43.1%	1	0%	-	-	-	HMMPfam_Ferric_reduct
STEAP4	79689	genome.wustl.edu	37	7	87913209	87913209	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024636.2	-1	validated	p.P126S	1.000	192	0%	65	47.7%	2	0%	possibly_damaging(0.789)	deleterious(0)	deleterious(0.740)	HMMPfam_F420_oxidored,superfamily_NAD(P)-binding Rossmann-fold domains
ZNF804B	219578	genome.wustl.edu	37	7	88847565	88847565	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181646.2	+1	provisional	p.E69K	1.000	164	0%	88	48.9%	0	-	possibly_damaging(0.921)	deleterious(0.01)	deleterious(0.776)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
STEAP1	26872	genome.wustl.edu	37	7	89790549	89790549	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012449.2	+1	reviewed	p.A172V	0.986	305	0%	153	43.1%	25	56%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ferric_reduct
AKAP9	10142	genome.wustl.edu	37	7	91625056	91625056	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005751.4	+1	reviewed	p.K291T	1.000	234	0%	72	40.3%	2	0%	possibly_damaging(0.818)	tolerated(0.57)	neutral(0.315)	NULL
AKAP9	10142	genome.wustl.edu	37	7	91674383	91674383	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005751.4	+1	reviewed	p.T1742A	1.000	156	0%	46	10.9%	0	-	probably_damaging(0.987)	tolerated(0.07)	deleterious(0.756)	NULL
AKAP9	10142	genome.wustl.edu	37	7	91690610	91690610	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005751.4	+1	reviewed	p.R1880C	1.000	78	0%	30	36.7%	5	60%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
AKAP9	10142	genome.wustl.edu	37	7	91735020	91735020	+	Nonsense_Mutation	SNP	C	C	T	rs183257184	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005751.4	+1	reviewed	p.R3787*	0.999	434	0%	241	50.2%	13	15.3%	-	-	-	NULL
KRIT1	889	genome.wustl.edu	37	7	91852280	91852280	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004912.3	-1	reviewed	p.R423*	1.000	203	0%	80	55%	8	12.5%	-	-	-	HMMSmart_SM00295
ERVW-1	30816	genome.wustl.edu	37	7	92098099	92098099	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014590.3	-1	reviewed	p.N533D	0.506	34	0%	18	61.1%	0	-	benign(0.224)	deleterious(0)	neutral(0.467)	NULL
SAMD9	54809	genome.wustl.edu	37	7	92732446	92732446	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017654.2	-1	validated	p.A989T	1.000	325	0.3%	149	43.6%	1	0%	probably_damaging(0.959)	deleterious(0.01)	deleterious(0.808)	NULL
SAMD9	54809	genome.wustl.edu	37	7	92732492	92732492	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017654.2	-1	validated	p.I973	0.000	391	0%	155	38.7%	2	0%	-	-	-	NULL
SAMD9L	219285	genome.wustl.edu	37	7	92760681	92760681	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152703.2	-1	validated	p.S1535F	0.197	198	0%	82	42.7%	4	0%	probably_damaging(0.995)	tolerated(1)	neutral(0.458)	NULL
SAMD9L	219285	genome.wustl.edu	37	7	92763129	92763129	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152703.2	-1	validated	p.K719T	0.000	87	0%	18	38.9%	0	-	benign(0.001)	tolerated(0.72)	neutral(0.002)	NULL
CCDC132	55610	genome.wustl.edu	37	7	92885840	92885840	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017667.2	+1	validated	p.D106A	1.000	487	0%	129	44.2%	2	50%	possibly_damaging(0.891)	deleterious(0.02)	deleterious(0.734)	HMMPfam_DUF2450
CCDC132	55610	genome.wustl.edu	37	7	92932812	92932812	+	Missense_Mutation	SNP	A	A	G	rs137879844	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017667.2	+1	validated	p.T468A	1.000	274	0%	107	41.1%	5	20%	benign(0.03)	tolerated(0.41)	neutral(0.017)	NULL
CALCR	799	genome.wustl.edu	37	7	93108741	93108741	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001742.3	-1	reviewed	p.G44*	0.035	327	0.3%	81	18.5%	0	-	-	-	-	superfamily_SSF111418
COL1A2	1278	genome.wustl.edu	37	7	94047082	94047082	+	Missense_Mutation	SNP	G	G	A	rs72658148		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000089.3	+1	reviewed	p.G637D	1.000	122	0%	69	24.6%	243	3.2%	unknown(0)	deleterious(0)	-	HMMPfam_Collagen
COL1A2	1278	genome.wustl.edu	37	7	94048850	94048850	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000089.3	+1	reviewed	p.A689V	0.995	299	0%	155	45.8%	222	5.8%	unknown(0)	tolerated(0.07)	-	NULL
COL1A2	1278	genome.wustl.edu	37	7	94049915	94049915	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000089.3	+1	reviewed	p.N750	1.000	65	0%	36	52.8%	206	9.7%	-	-	-	HMMPfam_Collagen
COL1A2	1278	genome.wustl.edu	37	7	94057126	94057126	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000089.3	+1	reviewed	p.P1152H	1.000	59	0%	28	39.3%	322	7.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_COLFI,HMMSmart_SM00038
CASD1	64921	genome.wustl.edu	37	7	94178882	94178882	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022900.4	+1	validated	p.S584F	1.000	727	0%	201	42.8%	6	50%	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	HMMPfam_Cas1p
PEG10	23089	genome.wustl.edu	37	7	94293706	94293706	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040152.1	+1	reviewed	p.R280C	1.000	14	0%	11	45.5%	65	70.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PPP1R9A	55607	genome.wustl.edu	37	7	94540006	94540006	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017650.2	+1	validated	p.R194Q	1.000	73	0%	70	54.3%	3	33.3%	unknown(0)	tolerated(0.07)	-	NULL
PPP1R9A	55607	genome.wustl.edu	37	7	94855325	94855325	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017650.2	+1	validated	p.P648H	1.000	93	0%	32	34.4%	6	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
PON3	5446	genome.wustl.edu	37	7	94993366	94993366	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000940.2	-1	reviewed	p.D168	1.000	128	0%	44	11.4%	0	-	-	-	-	HMMPfam_Arylesterase,superfamily_Calcium-dependent phosphotriesterase
PON3	5446	genome.wustl.edu	37	7	95001575	95001575	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000940.2	-1	reviewed	p.Q93*	0.182	463	0%	191	11.5%	0	-	-	-	-	superfamily_Calcium-dependent phosphotriesterase
PON2	5445	genome.wustl.edu	37	7	95035514	95035514	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000305.2	-1	reviewed	p.S275P	1.000	127	0%	52	38.5%	49	46.9%	benign(0.22)	tolerated(0.18)	neutral(0.077)	superfamily_SSF63829
PDK4	5166	genome.wustl.edu	37	7	95215030	95215030	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002612.3	-1	reviewed	p.Q387K	0.984	173	0%	107	39.3%	12	41.6%	benign(0)	tolerated(1)	-	NULL
PDK4	5166	genome.wustl.edu	37	7	95222119	95222119	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002612.3	-1	reviewed	p.R161Q	1.000	330	0%	168	40.5%	9	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_BCDHK_Adom3,superfamily_alpha-ketoacid dehydrogenase kinase N-terminal domain
ASNS	440	genome.wustl.edu	37	7	97482666	97482666	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001673.4	-1	reviewed	p.R424Q	0.998	263	0%	120	39.2%	48	14.5%	benign(0.015)	tolerated(0.61)	neutral(0.005)	HMMPfam_Asn_synthase,superfamily_SSF52402
ASNS	440	genome.wustl.edu	37	7	97483911	97483911	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001673.4	-1	reviewed	p.R407*	1.000	159	0%	97	41.2%	34	11.7%	-	-	-	HMMPfam_Asn_synthase,superfamily_SSF52402
ASNS	440	genome.wustl.edu	37	7	97488686	97488686	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001673.4	-1	reviewed	p.A171V	0.000	134	0%	64	12.5%	32	28.1%	benign(0)	tolerated(0.56)	neutral(0.006)	superfamily_SSF56235
ENSG00000221048	0	genome.wustl.edu	37	7	97535334	97535334	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000408121	+1	novel	NULL	0.203	86	0%	44	45.5%	1	0%	-	-	-	-
LMTK2	22853	genome.wustl.edu	37	7	97822252	97822252	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014916.3	+1	reviewed	p.T825	0.000	51	0%	39	28.2%	5	40%	-	-	-	NULL
LMTK2	22853	genome.wustl.edu	37	7	97822547	97822547	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014916.3	+1	reviewed	p.E924*	0.000	38	0%	24	29.2%	3	0%	-	-	-	NULL
TECPR1	25851	genome.wustl.edu	37	7	97861254	97861254	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015395.1	-1	provisional	p.T612	0.001	13	0%	19	68.4%	6	66.6%	-	-	-	superfamily_PH domain-like
TRRAP	8295	genome.wustl.edu	37	7	98527692	98527692	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003496.2	+1	validated	p.G1086*	1.000	98	1%	75	49.3%	4	0%	-	-	-	superfamily_ARM repeat
TRRAP	8295	genome.wustl.edu	37	7	98564724	98564724	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003496.2	+1	validated	p.R2388C	1.000	289	0%	144	44.4%	13	23%	possibly_damaging(0.715)	deleterious(0.05)	deleterious(0.605)	superfamily_ARM repeat
KPNA7	402569	genome.wustl.edu	37	7	98792738	98792738	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145715.1	-1	validated	p.V170M	0.000	38	0%	24	16.7%	0	-	benign(0)	tolerated(0.14)	neutral(0.249)	HMMPfam_Arm,HMMSmart_ARM,superfamily_ARM-type_fold
PTCD1	26024	genome.wustl.edu	37	7	99030946	99030946	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015545.2	-1	validated	p.C183	0.394	48	2.1%	55	49.1%	9	55.5%	-	-	-	HMMPfam_PPR
ZNF394	84124	genome.wustl.edu	37	7	99091608	99091608	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000394177	-1	known	e1+2	0.012	149	0%	115	11.3%	5	20%	-	-	-	-
ZNF394	84124	genome.wustl.edu	37	7	99091789	99091789	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032164.2	-1	provisional	p.R350M	0.000	113	0%	85	38.8%	15	26.6%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	superfamily_C2H2 and C2HC zinc fingers
ZNF655	79027	genome.wustl.edu	37	7	99171098	99171098	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083956.1	+1	reviewed	p.E491A	0.009	74	0%	29	55.2%	2	0%	benign(0.139)	deleterious(0.01)	neutral(0.418)	superfamily_SSF57667
CYP3A7	1551	genome.wustl.edu	37	7	99312299	99312299	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000765.3	-1	reviewed	p.F226C	0.999	260	0%	84	45.2%	0	-	benign(0.218)	deleterious(0.05)	neutral(0.367)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP3A4	1576	genome.wustl.edu	37	7	99365990	99365990	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017460.3	-1	reviewed	p.F219L	0.000	349	0%	93	38.7%	0	-	unknown(0)	tolerated(1)	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP3A43	64816	genome.wustl.edu	37	7	99453296	99453296	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022820.3	+1	reviewed	p.N251K	0.000	512	0%	154	51.3%	0	-	benign(0)	tolerated(1)	-	HMMPfam_p450,superfamily_Cytochrome P450
OR2AE1	81392	genome.wustl.edu	37	7	99473921	99473921	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005276.1	-1	provisional	p.V246M	0.052	36	0%	35	54.3%	0	-	possibly_damaging(0.948)	deleterious(0)	deleterious(0.836)	HMMPfam_7tm_1,superfamily_SSF81321
COPS6	10980	genome.wustl.edu	37	7	99689132	99689132	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006833.4	+1	reviewed	p.D278Y	1.000	86	0%	80	41.2%	259	40.1%	possibly_damaging(0.789)	deleterious(0)	deleterious(0.740)	NULL
MCM7	4176	genome.wustl.edu	37	7	99695333	99695333	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005916.3	-1	reviewed	p.A341T	1.000	228	0%	195	47.7%	98	46.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MCM,HMMSmart_SM00350,superfamily_P-loop containing nucleoside triphosphate hydrolases
MCM7	4176	genome.wustl.edu	37	7	99697372	99697372	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005916.3	-1	reviewed	p.R39Q	0.000	54	0%	49	18.4%	93	22.5%	benign(0.003)	tolerated(0.5)	neutral(0.010)	superfamily_Nucleic acid-binding proteins
GPC2	221914	genome.wustl.edu	37	7	99773398	99773398	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152742.1	-1	provisional	p.R149*	1.000	43	0%	35	40%	3	0%	-	-	-	HMMPfam_Glypican
GPC2	221914	genome.wustl.edu	37	7	99773977	99773977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152742.1	-1	provisional	p.R60W	1.000	30	0%	38	50%	8	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glypican
STAG3	10734	genome.wustl.edu	37	7	99799597	99799597	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012447.2	+1	validated	p.R776I	0.018	142	0%	104	43.3%	3	0%	possibly_damaging(0.78)	tolerated(0.12)	deleterious(0.552)	superfamily_ARM repeat
SPDYE3	441272	genome.wustl.edu	37	7	99909548	99909548	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000332397	+1	known	p.S240	0.022	80	1.3%	63	28.6%	0	-	-	-	-	NULL
PILRB	29990	genome.wustl.edu	37	7	99957010	99957010	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013440.3	+1	reviewed	p.G169S	0.001	63	0%	57	17.5%	119	11.7%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
TSC22D4	81628	genome.wustl.edu	37	7	100071967	100071967	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030935.3	-1	provisional	p.A287T	0.952	38	0%	39	53.8%	62	43.5%	benign(0.061)	deleterious(0.01)	neutral(0.410)	NULL
FBXO24	26261	genome.wustl.edu	37	7	100192772	100192772	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033506.2	+1	reviewed	p.D334N	1.000	41	0%	40	40%	2	50%	benign(0.304)	tolerated(0.58)	neutral(0.100)	superfamily_RCC1/BLIP-II
TFR2	7036	genome.wustl.edu	37	7	100225387	100225387	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003227.3	-1	reviewed	p.N554	0.003	33	0%	34	58.8%	3	66.6%	-	-	-	HMMPfam_Peptidase_M28,superfamily_Zn-dependent exopeptidases
GIGYF1	64599	genome.wustl.edu	37	7	100279843	100279843	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022574.4	-1	validated	p.A926V	1.000	15	0%	28	42.9%	36	36.1%	unknown(0)	deleterious(0.04)	-	NULL
ZAN	7455	genome.wustl.edu	37	7	100333378	100333378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003386.1	+1	reviewed	p.R30H	0.000	66	0%	63	87.3%	0	-	benign(0.293)	-	-	NULL
ZAN	7455	genome.wustl.edu	37	7	100363048	100363048	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003386.1	+1	reviewed	p.F1447L	0.013	23	0%	21	33.3%	0	-	possibly_damaging(0.9)	tolerated(0.65)	neutral(0.359)	superfamily_Serine proterase inhibitors,HMMPfam_TIL
SLC12A9	56996	genome.wustl.edu	37	7	100456740	100456740	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020246.2	+1	validated	p.V312I	0.999	76	0%	63	33.3%	40	52.5%	benign(0)	tolerated(0.42)	neutral(0.014)	HMMPfam_AA_permease
SLC12A9	56996	genome.wustl.edu	37	7	100459116	100459116	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020246.2	+1	validated	p.L482	1.000	11	0%	18	50%	36	33.3%	-	-	-	HMMPfam_AA_permease
SRRT	51593	genome.wustl.edu	37	7	100484493	100484493	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015908.5	+1	validated	p.E575D	1.000	26	0%	36	44.4%	72	27.7%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
MUC12	10071	genome.wustl.edu	37	7	100635033	100635033	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379442	+1	known	p.K540E	0.829	387	0%	346	22.5%	0	-	unknown(0)	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100635134	100635134	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379442	+1	known	p.I573	0.090	323	0%	311	24.1%	0	-	-	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100638655	100638655	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379442	+1	known	p.S1747Y	0.000	341	0%	318	11%	0	-	unknown(0)	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100642682	100642682	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379442	+1	known	p.G3089	0.001	767	0.3%	712	10.1%	0	-	-	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100642821	100642821	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379442	+1	known	p.E3136*	0.001	434	0%	383	7.6%	0	-	-	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100646890	100646890	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379442	+1	known	p.F4492C	0.000	360	0%	344	12.5%	0	-	possibly_damaging(0.448)	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100647301	100647301	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379442	+1	known	p.R4629H	0.000	576	0%	408	9.3%	0	-	benign(0.247)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100675397	100675397	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040105.1	+1	provisional	p.I234V	0.000	68	0%	58	43.1%	0	-	unknown(0)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100677318	100677318	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040105.1	+1	provisional	p.T874I	0.664	157	0%	78	47.4%	0	-	unknown(0)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100686501	100686501	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040105.1	+1	provisional	p.P3935L	0.035	133	0%	84	50%	0	-	probably_damaging(0.982)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100694912	100694912	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040105.1	+1	provisional	p.T4298I	0.000	159	0%	119	39.5%	0	-	unknown(0)	-	-	superfamily_SEA domain
TRIM56	81844	genome.wustl.edu	37	7	100732045	100732045	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030961.1	+1	provisional	p.G484	0.855	13	0%	17	47.1%	5	0%	-	-	-	NULL
SERPINE1	5054	genome.wustl.edu	37	7	100771751	100771751	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000602.3	+1	reviewed	p.H26R	0.000	43	0%	33	39.4%	1	0%	benign(0.011)	tolerated(0.53)	neutral(0.008)	HMMPfam_Serpin,superfamily_Prot_inh_serpin
PLOD3	8985	genome.wustl.edu	37	7	100849709	100849709	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000454310	-1	known	p.A216V	0.997	9	0.000	19	0.789	145	52.4%	-	-	-	HMMPfam_2OG-FeII_Oxy,HMMSmart_SM00702
PLOD3	8985	genome.wustl.edu	37	7	100853627	100853627	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000454310	-1	known	p.S108Y	1.000	13	0%	22	27.3%	89	48.3%	-	-	-	HMMSmart_SM00702
CUX1	1523	genome.wustl.edu	37	7	101758501	101758501	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181552.2	+1	reviewed	p.R208*	1.000	227	0%	111	86.5%	3	33.3%	-	-	-	NULL
CUX1	1523	genome.wustl.edu	37	7	101813741	101813741	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181552.2	+1	reviewed	p.Q247*	0.999	62	0%	50	60%	5	40%	-	-	-	NULL
CUX1	1523	genome.wustl.edu	37	7	101845340	101845340	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181552.2	+1	reviewed	p.K921	1.000	34	0%	28	35.7%	6	50%	-	-	-	NULL
CUX1	1523	genome.wustl.edu	37	7	101870843	101870843	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181552.2	+1	reviewed	p.S1109	0.000	44	0%	22	50%	3	33.3%	-	-	-	NULL
FAM185A	222234	genome.wustl.edu	37	7	102412857	102412857	+	Silent	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145268.1	+1	validated	p.G265	0.605	878	0%	258	20.2%	4	25%	-	-	-	NULL
FAM185A	222234	genome.wustl.edu	37	7	102449081	102449081	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026879.1	+1	validated	NULL	0.000	7	0.000	4	1.000	2	50%	-	-	-	-
LRRC17	10234	genome.wustl.edu	37	7	102584868	102584868	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031692.2	+1	validated	p.T380	0.034	175	0%	71	52.1%	98	37.7%	-	-	-	HMMSmart_SM00082,superfamily_RNI-like
SLC26A5	375611	genome.wustl.edu	37	7	103033456	103033456	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198999.2	-1	reviewed	p.A343	1.000	189	0%	124	21%	0	-	-	-	-	HMMPfam_Sulfate_transp
SLC26A5	375611	genome.wustl.edu	37	7	103050862	103050862	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198999.2	-1	reviewed	p.K235N	1.000	55	0%	31	41.9%	0	-	benign(0.218)	tolerated(0.23)	neutral(0.063)	HMMPfam_Sulfate_transp
RELN	5649	genome.wustl.edu	37	7	103179559	103179559	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005045.3	-1	reviewed	p.F2382L	0.741	49	0%	40	30%	0	-	possibly_damaging(0.864)	tolerated(1)	neutral(0.335)	NULL
RELN	5649	genome.wustl.edu	37	7	103180717	103180717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005045.3	-1	reviewed	p.S2286Y	0.979	34	0%	27	51.9%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
ORC5	5001	genome.wustl.edu	37	7	103844681	103844681	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002553.2	-1	reviewed	p.R25K	1.000	283	0%	127	43.3%	15	26.6%	benign(0.002)	tolerated(0.93)	-	NULL
MLL5	55904	genome.wustl.edu	37	7	104717761	104717761	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018682.3	+1	reviewed	p.Q337H	1.000	95	0%	48	50%	17	41.1%	possibly_damaging(0.543)	deleterious(0.04)	deleterious(0.533)	HMMPfam_SET,HMMSmart_SM00317
MLL5	55904	genome.wustl.edu	37	7	104747076	104747076	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018682.3	+1	reviewed	p.D902N	0.949	215	0%	98	41.8%	19	21%	unknown(0)	tolerated(0.07)	-	NULL
SRPK2	6733	genome.wustl.edu	37	7	104844090	104844090	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182692.1	-1	validated	p.A72T	0.997	96	0%	61	49.2%	14	50%	benign(0.004)	tolerated(0.39)	neutral(0.016)	NULL
PUS7	54517	genome.wustl.edu	37	7	105111236	105111236	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019042.3	-1	validated	p.A433T	1.000	259	0%	184	51.1%	13	53.8%	benign(0.088)	tolerated(0.09)	neutral(0.303)	HMMPfam_TruD,superfamily_PsdUridine_synth_cat_dom
RINT1	60561	genome.wustl.edu	37	7	105195515	105195515	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021930.4	+1	validated	p.Q504	1.000	289	0%	123	33.3%	6	50%	-	-	-	HMMPfam_RINT1_TIP1
ATXN7L1	222255	genome.wustl.edu	37	7	105254226	105254226	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000388807	-1	known	p.P738L	0.000	30	0%	42	52.4%	3	66.6%	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
PIK3CG	5294	genome.wustl.edu	37	7	106509138	106509138	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002649.2	+1	reviewed	p.D378N	1.000	28	3.6%	20	60%	0	-	benign(0.086)	deleterious(0.04)	neutral(0.355)	HMMPfam_PI3K_C2,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PIK3CG	5294	genome.wustl.edu	37	7	106515198	106515198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002649.2	+1	reviewed	p.E781K	0.013	254	0%	144	41%	0	-	benign(0)	tolerated(0.57)	neutral(0.006)	superfamily_Protein kinase-like (PK-like)
SLC26A4	5172	genome.wustl.edu	37	7	107303812	107303812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000441.1	+1	reviewed	p.R79Q	0.992	239	0.4%	144	47.2%	0	-	probably_damaging(0.961)	tolerated(0.16)	neutral(0.464)	NULL
SLC26A4	5172	genome.wustl.edu	37	7	107315421	107315421	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000441.1	+1	reviewed	p.I211T	0.999	424	0%	240	38.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Sulfate_transp
CBLL1	79872	genome.wustl.edu	37	7	107389424	107389424	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024814.2	+1	validated	p.A38V	0.974	164	0%	86	47.7%	7	42.8%	benign(0)	tolerated(0.33)	neutral(0.024)	NULL
SLC26A3	1811	genome.wustl.edu	37	7	107416902	107416902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000111.2	-1	reviewed	p.D558N	0.981	336	0%	123	40.7%	2	50%	benign(0.003)	tolerated(0.32)	neutral(0.024)	HMMPfam_STAS,superfamily_STAS
DLD	1738	genome.wustl.edu	37	7	107545828	107545828	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000108.3	+1	reviewed	p.G154E	1.000	213	0%	88	37.5%	39	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pyr_redox_2,superfamily_SSF51905
NRCAM	4897	genome.wustl.edu	37	7	107822360	107822360	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037132.1	-1	reviewed	p.N851S	0.996	51	0%	37	37.8%	15	20%	benign(0.005)	deleterious(0.02)	neutral(0.383)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
NRCAM	4897	genome.wustl.edu	37	7	107832180	107832180	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037132.1	-1	reviewed	p.S632	0.598	93	0%	49	40.8%	13	38.4%	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
NRCAM	4897	genome.wustl.edu	37	7	107878197	107878197	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037132.1	-1	reviewed	p.D41	1.000	369	0%	86	34.9%	0	-	-	-	-	NULL
PNPLA8	50640	genome.wustl.edu	37	7	108155632	108155632	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015723.2	-1	provisional	p.S102P	1.000	206	0%	128	44.5%	11	45.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
THAP5	168451	genome.wustl.edu	37	7	108204999	108204999	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130475.1	-1	validated	p.F275C	1.000	336	0%	158	53.2%	5	40%	benign(0.267)	deleterious(0.02)	neutral(0.411)	NULL
LRRN3	54674	genome.wustl.edu	37	7	110764619	110764619	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099658.1	+1	validated	p.T597	0.932	94	0%	27	59.3%	0	-	-	-	-	HMMPfam_fn3
DOCK4	9732	genome.wustl.edu	37	7	111368576	111368576	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000445943	-1	known	p.R1918Q	0.000	11	0%	13	46.2%	4	75%	-	-	-	NULL
DOCK4	9732	genome.wustl.edu	37	7	111382116	111382116	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014705.3	-1	reviewed	p.K1575Q	1.000	161	0%	93	40.9%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
DOCK4	9732	genome.wustl.edu	37	7	111462448	111462448	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014705.3	-1	reviewed	p.D967G	1.000	225	0%	101	33.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DOCK4	9732	genome.wustl.edu	37	7	111535677	111535677	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000445943	-1	known	p.S514L	0.538	150	0%	66	31.8%	1	100%	-	-	-	NULL
IFRD1	3475	genome.wustl.edu	37	7	112102141	112102141	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007245.1	+1	validated	p.T235I	1.000	298	0%	86	41.9%	14	50%	possibly_damaging(0.545)	deleterious(0.02)	deleterious(0.568)	HMMPfam_IFRD,superfamily_ARM repeat
TMEM168	64418	genome.wustl.edu	37	7	112407575	112407575	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022484.4	-1	validated	p.D591Y	1.000	219	0%	55	34.5%	22	59%	possibly_damaging(0.92)	deleterious(0.02)	deleterious(0.754)	NULL
PPP1R3A	5506	genome.wustl.edu	37	7	113517856	113517856	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002711.3	-1	reviewed	p.G1097	0.995	256	0%	45	46.7%	0	-	-	-	-	NULL
FOXP2	93986	genome.wustl.edu	37	7	114066652	114066652	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148898.2	+1	reviewed	p.A29V	1.000	66	0%	13	46.2%	3	66.6%	probably_damaging(0.978)	deleterious(0.01)	deleterious(0.826)	NULL
CAV1	857	genome.wustl.edu	37	7	116199240	116199240	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001753.4	+1	reviewed	p.R146C	1.000	104	0%	49	53.1%	11	18.1%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Caveolin
ST7	7982	genome.wustl.edu	37	7	116759714	116759714	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021908.2	+1	reviewed	p.S112P	1.000	154	0%	76	46.1%	14	42.8%	benign(0)	tolerated(0.11)	neutral(0.272)	HMMPfam_ST7
ASZ1	136991	genome.wustl.edu	37	7	117023111	117023111	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130768.2	-1	validated	p.Q247H	0.600	404	0%	73	39.7%	0	-	benign(0)	tolerated(0.22)	neutral(0.042)	NULL
CFTR	1080	genome.wustl.edu	37	7	117243838	117243838	+	Splice_Site	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000492.3	+1	reviewed	e17+2	1.000	112	0%	61	44.3%	0	-	-	-	-	-
KCND2	3751	genome.wustl.edu	37	7	119914757	119914757	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012281.2	+1	reviewed	p.S24L	1.000	22	0%	17	52.9%	2	0%	benign(0.004)	tolerated(0.07)	neutral(0.319)	NULL
KCND2	3751	genome.wustl.edu	37	7	119915022	119915022	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012281.2	+1	reviewed	p.I112	1.000	35	0%	18	55.6%	5	20%	-	-	-	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
TSPAN12	23554	genome.wustl.edu	37	7	120428704	120428704	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012338.3	-1	reviewed	p.F287C	1.000	160	0%	48	37.5%	7	28.5%	possibly_damaging(0.784)	tolerated(0.06)	deleterious(0.616)	NULL
C7orf58	79974	genome.wustl.edu	37	7	120782099	120782099	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024913.4	+1	validated	p.H653	0.000	132	0%	58	48.3%	0	-	-	-	-	NULL
WNT16	51384	genome.wustl.edu	37	7	120979236	120979236	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_057168.1	+1	reviewed	p.R312H	1.000	114	0%	51	43.1%	0	-	possibly_damaging(0.949)	deleterious(0.03)	deleterious(0.758)	HMMPfam_wnt,HMMSmart_SM00097
PTPRZ1	5803	genome.wustl.edu	37	7	121637966	121637966	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002851.2	+1	reviewed	p.M382I	1.000	182	0%	81	44.4%	0	-	benign(0.001)	tolerated(0.62)	neutral(0.004)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
PTPRZ1	5803	genome.wustl.edu	37	7	121671535	121671535	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002851.2	+1	reviewed	p.V1696	1.000	338	0.6%	104	46.2%	0	-	-	-	-	superfamily_(Phosphotyrosine protein) phosphatases II
AASS	10157	genome.wustl.edu	37	7	121773658	121773658	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005763.3	-1	reviewed	p.P41	0.017	79	0%	49	16.3%	2	0%	-	-	-	HMMPfam_AlaDh_PNT_N,superfamily_Formate/glycerate dehydrogenase catalytic domain-like
FEZF1	389549	genome.wustl.edu	37	7	121943913	121943913	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000427185	-1	known	e2-1	1.000	30	0%	31	51.6%	0	-	-	-	-	-
RNF133	168433	genome.wustl.edu	37	7	122338702	122338702	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139175.1	-1	reviewed	p.I91V	0.048	201	0%	85	48.2%	0	-	benign(0)	tolerated(0.39)	neutral(0.016)	HMMPfam_PA,superfamily_SSF52025
SLC13A1	6561	genome.wustl.edu	37	7	122757629	122757629	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022444.3	-1	validated	p.L516M	0.938	251	0%	84	29.8%	0	-	probably_damaging(0.988)	tolerated(1)	neutral(0.438)	HMMPfam_Na_sulph_symp
SLC13A1	6561	genome.wustl.edu	37	7	122774538	122774538	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022444.3	-1	validated	p.T286	0.000	186	0%	51	33.3%	0	-	-	-	-	HMMPfam_Na_sulph_symp
IQUB	154865	genome.wustl.edu	37	7	123092980	123092980	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178827.4	-1	validated	e12-1	1.000	164	0.6%	99	46.5%	0	-	-	-	-	-
IQUB	154865	genome.wustl.edu	37	7	123101556	123101556	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178827.4	-1	validated	p.R621H	0.000	229	0.4%	78	51.3%	1	0%	benign(0.02)	tolerated(0.21)	neutral(0.045)	NULL
IQUB	154865	genome.wustl.edu	37	7	123105061	123105061	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178827.4	-1	validated	p.E528	1.000	221	0%	65	50.8%	0	-	-	-	-	NULL
IQUB	154865	genome.wustl.edu	37	7	123143170	123143170	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178827.4	-1	validated	p.G232V	0.835	225	0%	111	38.7%	0	-	possibly_damaging(0.574)	tolerated(0.06)	deleterious(0.520)	NULL
NDUFA5	4698	genome.wustl.edu	37	7	123197368	123197368	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000340034	-1	known	p.Q52H	0.000	67	0%	25	52%	0	-	unknown(0)	-	-	NULL
ASB15	142685	genome.wustl.edu	37	7	123276983	123276983	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080928.3	+1	validated	p.Y572C	0.993	98	0%	51	52.9%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_SOCS_box,HMMSmart_SM00253
LMOD2	442721	genome.wustl.edu	37	7	123303136	123303136	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207163.1	+1	validated	p.S499Y	1.000	303	0.3%	92	41.3%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
GPR37	2861	genome.wustl.edu	37	7	124387177	124387177	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005302.2	-1	provisional	p.P415L	0.736	119	0%	38	10.5%	2	0%	benign(0.007)	deleterious(0.04)	neutral(0.349)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR37	2861	genome.wustl.edu	37	7	124404500	124404500	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005302.2	-1	provisional	p.S177	0.005	10	0%	12	41.7%	1	0%	-	-	-	NULL
GRM8	2918	genome.wustl.edu	37	7	126746620	126746620	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000845.2	-1	reviewed	p.S219	0.034	151	0%	66	40.9%	2	50%	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
ZNF800	168850	genome.wustl.edu	37	7	127014947	127014947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000265827	-1	known	p.S148L	1.000	345	0%	124	39.5%	10	20%	possibly_damaging(0.907)	deleterious(0.03)	deleterious(0.725)	NULL
ARF5	381	genome.wustl.edu	37	7	127231273	127231273	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001662.2	+1	reviewed	p.V155I	0.997	37	0%	32	43.8%	622	47.5%	benign(0)	tolerated(1)	-	HMMSmart_SM00175,HMMSmart_SM00178,HMMSmart_SM00177,PatternScan_ARF,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
SND1	27044	genome.wustl.edu	37	7	127326666	127326666	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014390.2	+1	validated	e2-1	1.000	43	0%	22	36.4%	0	-	-	-	-	-
SND1	27044	genome.wustl.edu	37	7	127326728	127326728	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014390.2	+1	validated	p.R47Q	1.000	36	0%	19	31.6%	65	1.5%	possibly_damaging(0.925)	tolerated(0.13)	deleterious(0.626)	HMMSmart_SNc,superfamily_Staphylococal_nuclease_OB-fold
SND1	27044	genome.wustl.edu	37	7	127729593	127729593	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014390.2	+1	validated	p.T824I	1.000	47	0%	68	42.6%	186	84.9%	benign(0.07)	tolerated(0.13)	neutral(0.258)	superfamily_Staphylococal_nuclease_OB-fold
CALU	813	genome.wustl.edu	37	7	128388680	128388680	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130674.1	+1	reviewed	p.A15S	1.000	126	0%	85	27.1%	61	45.9%	possibly_damaging(0.61)	tolerated(0.23)	neutral(0.253)	NULL
OPN1SW	611	genome.wustl.edu	37	7	128415539	128415539	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001708.2	-1	reviewed	p.F102	0.983	62	0%	39	56.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FLNC	2318	genome.wustl.edu	37	7	128485077	128485077	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001458.4	+1	reviewed	p.A1186	0.000	7	0.000	11	0.545	1	0%	-	-	-	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
FLNC	2318	genome.wustl.edu	37	7	128485259	128485259	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001458.4	+1	reviewed	p.A1247V	0.800	9	0.000	17	0.412	3	33.3%	benign(0.425)	deleterious(0.05)	deleterious(0.483)	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
FLNC	2318	genome.wustl.edu	37	7	128490933	128490933	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001458.4	+1	reviewed	p.R1825	0.988	11	0%	18	55.6%	1	100%	-	-	-	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
FLNC	2318	genome.wustl.edu	37	7	128494650	128494650	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001458.4	+1	reviewed	p.F2304S	1.000	7	0.000	16	0.438	4	25%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMSmart_SM00557,superfamily_E set domains
FLNC	2318	genome.wustl.edu	37	7	128496828	128496828	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001458.4	+1	reviewed	p.E2472K	1.000	52	0%	48	39.6%	1	0%	probably_damaging(1)	tolerated(0.25)	deleterious(0.537)	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
SMO	6608	genome.wustl.edu	37	7	128848687	128848687	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005631.3	+1	provisional	p.R451H	1.000	20	0%	27	33.3%	42	47.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Frizzled
SMO	6608	genome.wustl.edu	37	7	128849218	128849218	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005631.3	+1	provisional	p.R482	0.999	99	0%	114	44.7%	30	36.6%	-	-	-	HMMPfam_Frizzled
FAM40B	57464	genome.wustl.edu	37	7	129096369	129096369	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020704.2	+1	validated	p.I308	1.000	37	0%	16	50%	3	66.6%	-	-	-	HMMPfam_N1221
ENSG00000245606	0	genome.wustl.edu	37	7	130008216	130008216	+	RNA	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000501661	-1	known	NULL	0.013	64	0%	63	47.6%	0	-	-	-	-	-
CPA1	1357	genome.wustl.edu	37	7	130020967	130020967	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001868.2	+1	reviewed	p.D32N	0.003	20	0%	20	45%	0	-	benign(0)	tolerated(0.88)	-	HMMPfam_Propep_M14,superfamily_Prot_inh_propept
CEP41	95681	genome.wustl.edu	37	7	130040068	130040068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018718.1	-1	provisional	p.P262L	1.000	110	0%	70	52.9%	8	62.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase
CEP41	95681	genome.wustl.edu	37	7	130044442	130044442	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018718.1	-1	provisional	p.A129T	0.000	71	0%	64	32.8%	7	28.5%	benign(0)	tolerated(0.69)	neutral(0.002)	superfamily_Rhodanese/Cell cycle control phosphatase
CEP41	95681	genome.wustl.edu	37	7	130044508	130044508	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018718.1	-1	provisional	p.A107S	0.934	81	0%	48	31.2%	12	58.3%	benign(0.013)	tolerated(0.71)	neutral(0.002)	superfamily_Rhodanese/Cell cycle control phosphatase
MEST	4232	genome.wustl.edu	37	7	130144785	130144785	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002402.2	+1	reviewed	p.T299M	1.000	84	0%	33	48.5%	64	54.6%	benign(0.002)	tolerated(0.07)	neutral(0.319)	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases
COPG2	26958	genome.wustl.edu	37	7	130351766	130351766	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000445977	-1	known	p.R32C	1.000	412	0%	187	39%	10	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Adaptin_N,superfamily_ARM repeat
LOC647030	647030	genome.wustl.edu	37	7	131347242	131347242	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_017470.3	-1	model	NULL	0.991	118	0%	84	40.5%	4	0%	-	-	-	-
PLXNA4	91584	genome.wustl.edu	37	7	131844258	131844258	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020911.1	-1	validated	p.R1545Q	1.000	87	0%	61	54.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
PLXNA4	91584	genome.wustl.edu	37	7	131883312	131883312	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020911.1	-1	validated	p.I890	0.858	32	0%	28	42.9%	0	-	-	-	-	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
PLXNA4	91584	genome.wustl.edu	37	7	131888127	131888127	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020911.1	-1	validated	p.V784M	1.000	67	0%	60	36.7%	0	-	benign(0.004)	deleterious(0)	neutral(0.445)	NULL
LRGUK	136332	genome.wustl.edu	37	7	133943049	133943049	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144648.1	+1	provisional	p.R747W	0.001	277	0%	112	44.6%	1	0%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
AKR1B15	441282	genome.wustl.edu	37	7	134261764	134261764	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080538.2	+1	validated	p.S264Y	0.998	191	0%	73	47.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase
CALD1	800	genome.wustl.edu	37	7	134613548	134613548	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033138.3	+1	reviewed	p.R39W	1.000	30	0%	17	35.3%	25	52%	possibly_damaging(0.893)	-	-	HMMPfam_Caldesmon
CALD1	800	genome.wustl.edu	37	7	134642829	134642829	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033138.3	+1	reviewed	p.R649*	1.000	543	0%	224	46.4%	33	0%	-	-	-	HMMPfam_Caldesmon
C7orf49	78996	genome.wustl.edu	37	7	134853506	134853506	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000430372	-1	known	p.E42G	0.000	25	0%	33	60.6%	24	45.8%	benign(0.01)	tolerated(0.19)	neutral(0.050)	NULL
WDR91	29062	genome.wustl.edu	37	7	134889139	134889139	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014149.3	-1	validated	p.R258C	0.010	40	0%	16	37.5%	21	28.5%	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	NULL
CNOT4	4850	genome.wustl.edu	37	7	135078849	135078849	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013316.2	-1	validated	p.R480Q	1.000	95	1.1%	65	13.8%	9	22.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
NUP205	23165	genome.wustl.edu	37	7	135258456	135258456	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015135.2	+1	validated	p.A76T	0.995	216	0%	86	16.3%	19	31.5%	benign(0.005)	tolerated(0.78)	neutral(0.001)	NULL
NUP205	23165	genome.wustl.edu	37	7	135302415	135302415	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015135.2	+1	validated	p.R1252S	0.999	172	0%	91	44%	23	56.5%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	NULL
CHRM2	1129	genome.wustl.edu	37	7	136699972	136699972	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000739.2	+1	reviewed	p.D120	1.000	114	0%	33	42.4%	1	0%	-	-	-	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
CHRM2	1129	genome.wustl.edu	37	7	136700118	136700118	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000739.2	+1	reviewed	p.R169I	1.000	39	0%	11	72.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
DGKI	9162	genome.wustl.edu	37	7	137092735	137092735	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004717.2	-1	reviewed	p.E944*	1.000	230	0%	97	42.3%	0	-	-	-	-	superfamily_ANK
AKR1D1	6718	genome.wustl.edu	37	7	137790098	137790098	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005989.2	+1	validated	p.V168M	0.879	52	0%	59	37.3%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red,PatternScan_ALDOKETO_REDUCTASE_2
SVOPL	136306	genome.wustl.edu	37	7	138281250	138281250	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139456.1	-1	validated	p.G460E	0.998	87	0%	41	48.8%	1	100%	possibly_damaging(0.935)	tolerated(0.34)	neutral(0.404)	superfamily_MFS general substrate transporter
ATP6V0A4	50617	genome.wustl.edu	37	7	138432226	138432226	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020632.2	-1	reviewed	p.A422T	1.000	72	0%	65	49.2%	11	36.3%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_V_ATPase_I
ATP6V0A4	50617	genome.wustl.edu	37	7	138444564	138444564	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020632.2	-1	reviewed	p.R191Q	1.000	59	0%	32	50%	12	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_V_ATPase_I
KIAA1549	57670	genome.wustl.edu	37	7	138566273	138566273	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020910.2	-1	validated	p.N1314H	1.000	108	0%	79	57%	7	71.4%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
KIAA1549	57670	genome.wustl.edu	37	7	138583712	138583712	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020910.2	-1	validated	p.V1229A	0.000	81	0%	59	18.6%	15	40%	benign(0.001)	tolerated(0.44)	neutral(0.013)	NULL
KIAA1549	57670	genome.wustl.edu	37	7	138588359	138588359	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020910.2	-1	validated	p.V1165A	0.003	33	0%	33	27.3%	12	25%	benign(0.056)	tolerated(0.11)	neutral(0.275)	NULL
UBN2	254048	genome.wustl.edu	37	7	138978036	138978036	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173569.3	+1	validated	p.P1160H	1.000	144	0%	61	36.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HIPK2	28996	genome.wustl.edu	37	7	139281600	139281600	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022740.4	-1	validated	p.A511V	0.166	27	0%	23	39.1%	13	38.4%	-	-	-	NULL
HIPK2	28996	genome.wustl.edu	37	7	139416730	139416730	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000263551	-1	known	p.P35L	1.000	103	0%	83	47%	11	54.5%	benign(0.011)	tolerated(0.11)	neutral(0.272)	NULL
TBXAS1	6916	genome.wustl.edu	37	7	139653193	139653193	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001061.4	+1	reviewed	p.C160	0.078	99	0%	59	61%	1	0%	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
TBXAS1	6916	genome.wustl.edu	37	7	139655298	139655298	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001061.4	+1	reviewed	p.A195T	1.000	21	0%	19	78.9%	2	0%	probably_damaging(0.998)	tolerated(0.05)	deleterious(0.820)	HMMPfam_p450,superfamily_Cytochrome P450
JHDM1D	80853	genome.wustl.edu	37	7	139801801	139801801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030647.1	-1	validated	p.L530I	1.000	279	0%	144	16.7%	10	10%	benign(0.084)	tolerated(0.39)	neutral(0.022)	NULL
SLC37A3	84255	genome.wustl.edu	37	7	140045748	140045748	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000485734	-1	known	p.S128F	1.000	55	0%	42	33.3%	11	45.4%	-	-	-	superfamily_MFS general substrate transporter
MKRN1	23608	genome.wustl.edu	37	7	140155652	140155652	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013446.3	-1	validated	p.E345D	1.000	162	0%	91	27.5%	60	36.6%	probably_damaging(0.964)	tolerated(0.43)	neutral(0.420)	superfamily_RING/U-box
DENND2A	27147	genome.wustl.edu	37	7	140301677	140301677	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015689.3	-1	validated	p.S174L	0.042	31	0%	18	44.4%	5	0%	benign(0.273)	deleterious(0)	deleterious(0.474)	NULL
AGK	55750	genome.wustl.edu	37	7	141341172	141341172	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018238.3	+1	validated	p.A284V	0.020	51	0%	27	63%	10	70%	benign(0.008)	tolerated(0.46)	neutral(0.012)	NULL
KIAA1147	57189	genome.wustl.edu	37	7	141362499	141362499	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080392.1	-1	provisional	p.G442V	1.000	28	0%	28	39.3%	16	43.7%	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	HMMPfam_DUF2347
SSBP1	6742	genome.wustl.edu	37	7	141443407	141443407	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003143.1	+1	validated	p.V44	1.000	207	0%	140	47.9%	253	42.2%	-	-	-	HMMPfam_SSB,superfamily_Nucleic acid-binding proteins
SSBP1	6742	genome.wustl.edu	37	7	141443746	141443746	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003143.1	+1	validated	p.R91W	1.000	157	0.6%	82	39%	320	48.7%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_SSB,superfamily_Nucleic acid-binding proteins
MGAM	8972	genome.wustl.edu	37	7	141747587	141747587	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004668.2	+1	reviewed	p.R834Q	0.997	206	0%	73	42.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MGAM	8972	genome.wustl.edu	37	7	141770895	141770895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000475668	+1	known	p.E1721D	0.958	38	0%	23	30.4%	0	-	possibly_damaging(0.649)	tolerated(0.23)	neutral(0.270)	NULL
MGAM	8972	genome.wustl.edu	37	7	141791805	141791805	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000475668	+1	known	p.P2302	0.000	398	0%	189	41.8%	1	0%	-	-	-	HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases
MGAM	8972	genome.wustl.edu	37	7	141805626	141805626	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004668.2	+1	reviewed	p.D1837N	0.000	236	0.4%	108	45.4%	0	-	benign(0.034)	tolerated(0.62)	neutral(0.006)	NULL
TRBV4-1	28617	genome.wustl.edu	37	7	142013470	142013470	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390357	+1	known	p.L109I	0.259	61	0%	40	47.5%	0	-	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	HMMPfam_V-set,superfamily_Immunoglobulin
TRBV4-2	28616	genome.wustl.edu	37	7	142045588	142045588	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390392	+1	known	p.S39Y	0.000	191	0%	126	27.8%	0	-	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMPfam_V-set,superfamily_SSF48726
TRBV7-7	28591	genome.wustl.edu	37	7	142119857	142119857	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390377	-1	known	p.R104W	0.000	48	0%	38	44.7%	0	-	probably_damaging(0.953)	deleterious(0.01)	deleterious(0.802)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
TRBV10-1	28585	genome.wustl.edu	37	7	142231672	142231672	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390364	-1	known	p.G82D	0.004	77	0%	45	13.3%	0	-	possibly_damaging(0.895)	deleterious(0.03)	deleterious(0.718)	HMMPfam_V-set,superfamily_SSF48726
TRBC2	28638	genome.wustl.edu	37	7	142498768	142498768	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000466254	+1	known	p.S15N	0.959	28	0%	34	32.4%	54	0%	-	-	-	HMMPfam_C1-set,superfamily_Immunoglobulin
EPHB6	2051	genome.wustl.edu	37	7	142567586	142567586	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004445.3	+1	reviewed	p.L825R	1.000	57	0%	56	33.9%	16	25%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
TRPV6	55503	genome.wustl.edu	37	7	142575684	142575684	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018646.2	-1	validated	p.R75I	1.000	162	0%	144	43.1%	1	0%	benign(0.381)	deleterious(0.01)	deleterious(0.527)	superfamily_Ankyrin repeat
TAS2R40	259286	genome.wustl.edu	37	7	142919343	142919343	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176882.1	+1	provisional	p.R58C	0.000	116	0%	46	32.6%	0	-	benign(0)	tolerated(0.2)	neutral(0.049)	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like
CASP2	835	genome.wustl.edu	37	7	142988672	142988672	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032982.2	+1	reviewed	p.E38	1.000	152	0%	97	40.2%	26	53.8%	-	-	-	HMMPfam_CARD,HMMSmart_SM00114,superfamily_DEATH domain
CASP2	835	genome.wustl.edu	37	7	143002040	143002040	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032982.2	+1	reviewed	p.A412V	0.280	45	0%	31	25.8%	46	17.3%	benign(0.286)	tolerated(0.27)	neutral(0.121)	HMMPfam_Peptidase_C14,HMMSmart_SM00115,superfamily_Caspase-like
ZYX	7791	genome.wustl.edu	37	7	143087029	143087029	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010972.1	+1	reviewed	p.A525T	0.997	36	0%	32	43.8%	463	39.7%	benign(0.01)	deleterious(0)	neutral(0.445)	HMMPfam_LIM,HMMSmart_LIM,superfamily_SSF57716
EPHA1	2041	genome.wustl.edu	37	7	143095904	143095904	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005232.4	-1	reviewed	p.T376A	0.000	15	0%	14	50%	14	35.7%	benign(0)	tolerated(0.82)	neutral(0.001)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
FAM115C	285966	genome.wustl.edu	37	7	143400311	143400311	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130025.1	+1	validated	p.A75V	0.937	42	0%	45	22.2%	1	0%	benign(0.001)	tolerated(0.5)	neutral(0.010)	NULL
FAM115C	285966	genome.wustl.edu	37	7	143417197	143417197	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130025.1	+1	validated	p.E349K	1.000	16	0%	18	22.2%	0	-	probably_damaging(0.954)	deleterious(0.01)	deleterious(0.803)	NULL
OR2F1	26211	genome.wustl.edu	37	7	143657410	143657410	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012369.2	+1	provisional	p.A116V	0.842	146	0.7%	116	17.2%	0	-	benign(0.002)	tolerated(0.25)	neutral(0.037)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
OR2A2	442361	genome.wustl.edu	37	7	143807225	143807225	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005480.2	+1	validated	p.L184F	0.013	73	0%	37	32.4%	0	-	benign(0.402)	deleterious(0.03)	deleterious(0.493)	HMMPfam_7tm_1,superfamily_SSF81321
ARHGEF35	445328	genome.wustl.edu	37	7	143884218	143884218	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003702.2	-1	validated	p.D420G	0.001	70	0%	50	22%	13	69.2%	probably_damaging(0.998)	tolerated(0.21)	deleterious(0.518)	NULL
ARHGEF5	7984	genome.wustl.edu	37	7	144062220	144062220	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005435.3	+1	reviewed	p.P820S	0.000	65	0%	78	19.2%	10	30%	benign(0.022)	tolerated(0.34)	neutral(0.024)	NULL
NOBOX	135935	genome.wustl.edu	37	7	144096935	144096935	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080413.2	-1	provisional	p.A357T	0.997	172	0%	141	46.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
CNTNAP2	26047	genome.wustl.edu	37	7	146829371	146829371	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014141.5	+1	reviewed	p.T373M	0.995	180	0%	58	55.2%	1	100%	probably_damaging(0.996)	tolerated(0.22)	deleterious(0.504)	superfamily_Concanavalin A-like lectins/glucanases
CNTNAP2	26047	genome.wustl.edu	37	7	147336343	147336343	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014141.5	+1	reviewed	p.Y681*	1.000	60	0%	30	30%	0	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
CNTNAP2	26047	genome.wustl.edu	37	7	148080965	148080965	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014141.5	+1	reviewed	p.D1234Y	1.000	22	0%	11	54.5%	0	-	probably_damaging(0.992)	deleterious(0.03)	deleterious(0.812)	NULL
C7orf33	202865	genome.wustl.edu	37	7	148311252	148311252	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145304.2	+1	predicted	p.R108I	0.030	83	0%	54	37%	0	-	benign(0.201)	-	-	NULL
LOC643438	643438	genome.wustl.edu	37	7	148334295	148334295	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_015310.2	+1	model	NULL	0.118	56	0%	41	56.1%	0	-	-	-	-	-
EZH2	2146	genome.wustl.edu	37	7	148515008	148515008	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004456.3	-1	reviewed	p.E401*	1.000	540	0%	237	42.2%	7	57.1%	-	-	-	NULL
EZH2	2146	genome.wustl.edu	37	7	148523586	148523586	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004456.3	-1	reviewed	p.C289	1.000	259	0%	101	44.6%	12	16.6%	-	-	-	NULL
ZNF425	155054	genome.wustl.edu	37	7	148800771	148800771	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001661.2	-1	validated	p.F731S	0.992	28	0%	29	34.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF425	155054	genome.wustl.edu	37	7	148801034	148801034	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001661.2	-1	validated	p.C643	0.963	63	0%	46	37%	3	33.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF398	57541	genome.wustl.edu	37	7	148873567	148873567	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170686.2	+1	reviewed	p.G223	0.994	381	0%	228	37.3%	9	55.5%	-	-	-	NULL
ZNF282	8427	genome.wustl.edu	37	7	148895724	148895724	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003575.2	+1	validated	p.G155	0.998	28	0%	10	50%	18	44.4%	-	-	-	NULL
ZNF282	8427	genome.wustl.edu	37	7	148895810	148895810	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003575.2	+1	validated	p.R184Q	1.000	12	0%	13	53.8%	16	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZNF746	155061	genome.wustl.edu	37	7	149189995	149189995	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152557.4	-1	validated	p.R159C	0.904	72	0%	61	47.5%	16	37.5%	probably_damaging(0.965)	deleterious(0.01)	deleterious(0.812)	NULL
SSPO	23145	genome.wustl.edu	37	7	149482639	149482639	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378016	+1	known	p.A1019T	0.998	10	0.000	9	0.556	0	-	-	-	-	HMMPfam_VWD,HMMSmart_SM00216,HMMSmart_SM00215
SSPO	23145	genome.wustl.edu	37	7	149483252	149483252	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378016	+1	known	p.R1107H	0.000	11	0%	17	23.5%	1	0%	-	-	-	HMMPfam_VWD,HMMSmart_SM00216
SSPO	23145	genome.wustl.edu	37	7	149500350	149500350	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378016	+1	known	p.L2626M	0.028	15	0%	13	30.8%	0	-	-	-	-	superfamily_Serine proterase inhibitors
SSPO	23145	genome.wustl.edu	37	7	149503943	149503943	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378016	+1	known	p.A2923T	0.000	24	0%	19	36.8%	0	-	-	-	-	PatternScan_BPTI_KUNITZ_1,superfamily_Serine proterase inhibitors
SSPO	23145	genome.wustl.edu	37	7	149514991	149514991	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378016	+1	known	p.S3794L	1.000	10	0.000	9	0.444	1	100%	-	-	-	superfamily_PMP inhibitors
SSPO	23145	genome.wustl.edu	37	7	149516593	149516593	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378016	+1	known	p.R3999Q	0.900	7	0.000	4	1.000	0	-	-	-	-	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ZNF862	643641	genome.wustl.edu	37	7	149559177	149559177	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099220.1	+1	provisional	p.F976	0.014	11	0%	13	46.2%	7	57.1%	-	-	-	NULL
ACTR3C	653857	genome.wustl.edu	37	7	149992433	149992433	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000477871	-1	known	p.E84*	1.000	616	0%	327	38.2%	6	50%	-	-	-	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
GIMAP8	155038	genome.wustl.edu	37	7	150164371	150164371	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175571.2	+1	reviewed	p.T195	0.000	94	0%	37	54.1%	0	-	-	-	-	HMMPfam_AIG1
GIMAP8	155038	genome.wustl.edu	37	7	150171646	150171646	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175571.2	+1	reviewed	p.R410M	0.000	107	0.9%	53	45.3%	1	0%	possibly_damaging(0.835)	tolerated(0.09)	deleterious(0.615)	HMMPfam_AIG1,superfamily_SSF52540
GIMAP8	155038	genome.wustl.edu	37	7	150174541	150174541	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175571.2	+1	reviewed	p.T557	0.000	91	0%	65	46.2%	2	0%	-	-	-	HMMPfam_AIG1,superfamily_SSF52540
GIMAP2	26157	genome.wustl.edu	37	7	150389664	150389664	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015660.2	+1	reviewed	p.R97M	0.016	76	0%	32	37.5%	1	0%	probably_damaging(0.975)	deleterious(0.01)	deleterious(0.823)	HMMPfam_AIG1,superfamily_SSF52540
TMEM176A	55365	genome.wustl.edu	37	7	150499362	150499362	+	Silent	SNP	C	C	T	rs140770075	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018487.2	+1	validated	p.R78	0.004	155	0%	138	50%	12	0%	-	-	-	HMMPfam_LR8
ABP1	26	genome.wustl.edu	37	7	150555016	150555016	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001091.2	+1	reviewed	p.H486	0.074	37	0%	24	45.8%	3	66.6%	-	-	-	HMMPfam_Cu_amine_oxid,superfamily_Amine oxidase catalytic domain
NOS3	4846	genome.wustl.edu	37	7	150710390	150710390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000603.4	+1	reviewed	p.E1060K	1.000	10	0%	15	53.3%	39	46.1%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_NAD_binding_1,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain
ABCB8	11194	genome.wustl.edu	37	7	150739068	150739068	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007188.3	+1	reviewed	p.T546	0.003	15	0%	19	36.8%	25	48%	-	-	-	HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540
SLC4A2	6522	genome.wustl.edu	37	7	150765066	150765066	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003040.3	+1	validated	p.E358K	0.996	31	0%	39	35.9%	32	50%	benign(0.018)	tolerated(0.06)	neutral(0.323)	HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein
SLC4A2	6522	genome.wustl.edu	37	7	150769170	150769170	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003040.3	+1	validated	p.A828T	1.000	79	0%	67	44.8%	100	53%	benign(0.045)	tolerated(0.11)	neutral(0.274)	HMMPfam_HCO3_cotransp
AGAP3	116988	genome.wustl.edu	37	7	150817078	150817078	+	Nonsense_Mutation	SNP	C	C	T	rs191096334	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000467724	+1	known	p.R98*	1.000	10	0.000	8	0.500	56	30.3%	possibly_damaging(0.824)	deleterious(0.04)	deleterious(0.661)	NULL
SMARCD3	6604	genome.wustl.edu	37	7	150937528	150937528	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003801.1	-1	reviewed	p.V340	1.000	75	0%	72	41.7%	52	38.4%	-	-	-	superfamily_SWIB/MDM2 domain
NUB1	51667	genome.wustl.edu	37	7	151064031	151064031	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016118.3	+1	validated	p.C269W	0.891	114	0%	83	45.8%	15	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PRKAG2	51422	genome.wustl.edu	37	7	151292508	151292508	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016203.3	-1	reviewed	p.R263*	1.000	162	0%	95	36.8%	16	37.5%	-	-	-	NULL
GALNTL5	168391	genome.wustl.edu	37	7	151680185	151680185	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145292.3	+1	validated	p.T161	0.468	127	0%	119	52.9%	0	-	-	-	-	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
MLL3	58508	genome.wustl.edu	37	7	151845745	151845745	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170606.2	-1	reviewed	p.D4423Y	1.000	79	0%	31	38.7%	26	46.1%	unknown(0)	-	-	NULL
MLL3	58508	genome.wustl.edu	37	7	151927004	151927004	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000457618	-1	known	p.N119H	0.995	398	0%	166	11.4%	0	-	-	-	-	NULL
ACTR3B	57180	genome.wustl.edu	37	7	152550659	152550659	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020445.4	+1	validated	p.S386	0.980	24	0%	34	47.1%	29	51.7%	-	-	-	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
PAXIP1	22976	genome.wustl.edu	37	7	154767882	154767882	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007349.3	-1	reviewed	p.E200*	0.994	329	0%	226	47.3%	8	0%	-	-	-	NULL
HTR5A	3361	genome.wustl.edu	37	7	154862802	154862802	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024012.2	+1	reviewed	p.I65V	1.000	28	0%	18	38.9%	0	-	probably_damaging(0.979)	deleterious(0.04)	deleterious(0.771)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
HTR5A	3361	genome.wustl.edu	37	7	154862844	154862844	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024012.2	+1	reviewed	p.V79M	1.000	22	0%	16	31.2%	0	-	benign(0.029)	deleterious(0.04)	neutral(0.350)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
NOM1	64434	genome.wustl.edu	37	7	156759714	156759714	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138400.1	+1	provisional	p.T742	0.742	528	0%	271	44.6%	4	25%	-	-	-	HMMPfam_MA3,HMMSmart_MA3
UBE3C	9690	genome.wustl.edu	37	7	157009619	157009619	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014671.2	+1	validated	p.P623H	1.000	114	0.9%	65	36.9%	27	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NCAPG2	54892	genome.wustl.edu	37	7	158439163	158439163	+	Silent	SNP	C	C	T	rs192363025	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441982	-1	known	p.R811Q	0.000	279	0%	101	42.6%	23	34.7%	-	-	-	NULL
NCAPG2	54892	genome.wustl.edu	37	7	158468202	158468202	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441982	-1	known	p.R233Q	0.003	115	0%	50	48%	25	48%	-	-	-	superfamily_ARM repeat
WDR60	55112	genome.wustl.edu	37	7	158669357	158669357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018051.4	+1	validated	p.R183I	0.998	287	0%	170	43.5%	2	0%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	superfamily_WD40 repeat-like
ZNF596	169270	genome.wustl.edu	37	8	196220	196220	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042415.1	+1	validated	p.R458I	0.000	214	0%	113	63.7%	2	100%	probably_damaging(0.99)	tolerated(0.39)	neutral(0.458)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
FBXO25	26260	genome.wustl.edu	37	8	401397	401397	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183421.1	+1	reviewed	p.R202*	1.000	370	0%	295	20.3%	59	5%	-	-	-	NULL
DLGAP2	9228	genome.wustl.edu	37	8	1497534	1497534	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004745.3	+1	reviewed	p.S225	0.225	4	0.000	10	0.600	0	-	-	-	-	NULL
DLGAP2	9228	genome.wustl.edu	37	8	1626757	1626757	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004745.3	+1	reviewed	p.M809T	1.000	22	0%	32	28.1%	0	-	possibly_damaging(0.56)	deleterious(0)	deleterious(0.635)	HMMPfam_GKAP
MYOM2	9172	genome.wustl.edu	37	8	1998973	1998973	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003970.2	+1	validated	p.E31	0.846	74	0%	96	78.1%	0	-	-	-	-	NULL
MYOM2	9172	genome.wustl.edu	37	8	2000292	2000292	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003970.2	+1	validated	p.A42T	0.000	44	0%	75	54.7%	0	-	benign(0)	tolerated(0.32)	neutral(0.024)	NULL
MYOM2	9172	genome.wustl.edu	37	8	2057285	2057285	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003970.2	+1	validated	p.R1048Q	0.995	210	0%	202	13.4%	0	-	benign(0.175)	tolerated(0.3)	neutral(0.044)	NULL
CSMD1	64478	genome.wustl.edu	37	8	2820773	2820773	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033225.5	-1	validated	p.V3143A	0.748	24	0%	32	37.5%	0	-	benign(0.058)	tolerated(0.09)	neutral(0.300)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD1	64478	genome.wustl.edu	37	8	2855536	2855536	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033225.5	-1	validated	p.R2793*	0.521	26	0%	20	80%	0	-	-	-	-	superfamily_Complement control module/SCR domain
CSMD1	64478	genome.wustl.edu	37	8	2954436	2954436	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033225.5	-1	validated	p.N2359S	1.000	259	0%	173	50.9%	0	-	possibly_damaging(0.944)	tolerated(0.66)	neutral(0.391)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD1	64478	genome.wustl.edu	37	8	2967697	2967697	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033225.5	-1	validated	p.N2198	0.212	140	0%	109	45.9%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD1	64478	genome.wustl.edu	37	8	3000164	3000164	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033225.5	-1	validated	p.E2023K	1.000	225	0%	232	74.6%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD1	64478	genome.wustl.edu	37	8	3008925	3008925	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033225.5	-1	validated	p.G2010S	1.000	184	0%	154	22.7%	0	-	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD1	64478	genome.wustl.edu	37	8	3267028	3267028	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033225.5	-1	validated	p.P555L	1.000	42	0%	40	32.5%	0	-	benign(0)	tolerated(0.3)	neutral(0.029)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
MCPH1	79648	genome.wustl.edu	37	8	6299628	6299628	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024596.3	+1	reviewed	p.N207	0.000	566	0%	382	42.9%	10	30%	-	-	-	NULL
MCPH1	79648	genome.wustl.edu	37	8	6301994	6301994	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024596.3	+1	reviewed	p.L251	0.000	375	0%	282	17.7%	10	20%	-	-	-	NULL
ANGPT2	285	genome.wustl.edu	37	8	6360744	6360744	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001147.2	-1	reviewed	p.G457R	1.000	181	0%	258	22.9%	11	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like
ANGPT2	285	genome.wustl.edu	37	8	6385128	6385128	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001147.2	-1	reviewed	p.K172Q	1.000	1015	0%	898	24.2%	5	20%	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	NULL
XKR5	389610	genome.wustl.edu	37	8	6690240	6690240	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207411.4	-1	validated	p.R81W	1.000	54	0%	82	31.7%	0	-	-	-	-	HMMPfam_XK-related
DEFA4	1669	genome.wustl.edu	37	8	6794409	6794409	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001925.1	-1	reviewed	p.A5T	0.000	45	0%	78	17.9%	0	-	unknown(0)	tolerated(0.31)	-	HMMPfam_Defensin_propep
ENSG00000164845	0	genome.wustl.edu	37	8	8092012	8092012	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000338711	+1	known	p.A83D	1.000	23	0%	27	22.2%	3	0%	-	-	-	NULL
SGK223	157285	genome.wustl.edu	37	8	8175769	8175769	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080826.1	-1	validated	p.G1372	0.205	20	0%	37	56.8%	25	40%	-	-	-	NULL
SGK223	157285	genome.wustl.edu	37	8	8176344	8176344	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080826.1	-1	validated	p.A1181T	0.000	5	0.000	11	0.364	0	-	benign(0)	tolerated(0.41)	neutral(0.015)	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
SGK223	157285	genome.wustl.edu	37	8	8197042	8197042	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080826.1	-1	validated	p.G756S	0.998	56	0%	64	34.4%	29	13.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SGK223	157285	genome.wustl.edu	37	8	8239157	8239157	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080826.1	-1	validated	p.F34C	1.000	28	0%	32	37.5%	9	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
MFHAS1	9258	genome.wustl.edu	37	8	8747627	8747627	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004225.2	-1	reviewed	p.H981R	1.000	41	0%	44	47.7%	65	52.3%	probably_damaging(0.975)	tolerated(0.18)	deleterious(0.473)	NULL
MFHAS1	9258	genome.wustl.edu	37	8	8747634	8747634	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004225.2	-1	reviewed	p.T979A	1.000	43	0%	48	25%	62	20.9%	possibly_damaging(0.851)	deleterious(0.04)	deleterious(0.676)	NULL
MFHAS1	9258	genome.wustl.edu	37	8	8748256	8748256	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004225.2	-1	reviewed	p.A771	0.000	22	0%	36	27.8%	31	19.3%	-	-	-	NULL
ERI1	90459	genome.wustl.edu	37	8	8875812	8875812	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153332.3	+1	validated	p.Q196H	0.991	220	0%	144	23.6%	21	28.5%	benign(0.181)	tolerated(0.16)	neutral(0.076)	HMMSmart_EXOIII,superfamily_RNaseH_fold,HMMPfam_Exonuc_X-T
MIR597	693182	genome.wustl.edu	37	8	9599259	9599259	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384968	+1	known	NULL	0.000	218	0%	161	29.2%	0	-	-	-	-	-
TNKS	8658	genome.wustl.edu	37	8	9609137	9609137	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003747.2	+1	validated	p.L951V	0.094	86	0%	70	27.1%	24	29.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RP1L1	94137	genome.wustl.edu	37	8	10465891	10465891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178857.5	-1	validated	p.A1906V	0.000	199	0%	278	19.8%	0	-	unknown(0)	tolerated(0.14)	-	HMMPfam_S-antigen
RP1L1	94137	genome.wustl.edu	37	8	10465976	10465976	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178857.5	-1	validated	p.E1878*	0.061	176	0%	244	44.3%	0	-	-	-	-	HMMPfam_S-antigen
RP1L1	94137	genome.wustl.edu	37	8	10466259	10466259	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178857.5	-1	validated	p.A1783	0.000	151	0%	224	24.1%	0	-	-	-	-	HMMPfam_S-antigen
RP1L1	94137	genome.wustl.edu	37	8	10467228	10467228	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178857.5	-1	validated	p.T1460	0.000	19	5.3%	36	61.1%	0	-	-	-	-	NULL
RP1L1	94137	genome.wustl.edu	37	8	10468390	10468390	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178857.5	-1	validated	p.R1073Q	0.000	4	0.000	10	0.400	0	-	possibly_damaging(0.948)	tolerated(0.23)	neutral(0.432)	NULL
PINX1	54984	genome.wustl.edu	37	8	10677739	10677739	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017884.4	-1	provisional	p.C145	1.000	263	0%	203	24.1%	12	25%	-	-	-	NULL
XKR6	286046	genome.wustl.edu	37	8	10755783	10755783	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000382461	-1	known	p.G312V	1.000	16	0%	29	37.9%	0	-	-	-	-	NULL
XKR6	286046	genome.wustl.edu	37	8	10756267	10756267	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173683.3	-1	provisional	p.S374Y	1.000	50	2%	95	67.4%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_XK-related
XKR6	286046	genome.wustl.edu	37	8	10782234	10782234	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173683.3	-1	provisional	p.R291C	1.000	33	0%	36	41.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_XK-related
MTMR9	66036	genome.wustl.edu	37	8	11167182	11167182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015458.3	+1	reviewed	p.A319V	1.000	61	0%	44	22.7%	13	7.6%	possibly_damaging(0.762)	deleterious(0.01)	deleterious(0.688)	superfamily_SSF52799
MTMR9	66036	genome.wustl.edu	37	8	11174403	11174403	+	Splice_Site	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015458.3	+1	reviewed	e8+1	1.000	76	0%	65	27.7%	0	-	-	-	-	-
MTMR9	66036	genome.wustl.edu	37	8	11180248	11180248	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015458.3	+1	reviewed	p.R534M	1.000	168	0%	141	20.6%	5	0%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	NULL
ENSG00000205879	0	genome.wustl.edu	37	8	12032523	12032523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000382200	-1	known	p.Q88H	0.004	56	0%	87	26.4%	0	-	-	-	-	NULL
OR7E8P	346708	genome.wustl.edu	37	8	12542192	12542192	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000317826	-1	known	p.L165	0.054	192	0%	163	17.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR7E8P	346708	genome.wustl.edu	37	8	12542535	12542535	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000317826	-1	known	p.A51V	0.102	15	0%	18	72.2%	0	-	-	-	-	superfamily_SSF81321
KIAA1456	57604	genome.wustl.edu	37	8	12870239	12870239	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020844.2	+1	validated	p.T67	0.274	190	0%	176	26.1%	0	-	-	-	-	HMMPfam_Methyltransf_11,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
KIAA1456	57604	genome.wustl.edu	37	8	12879416	12879416	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020844.2	+1	validated	p.R410C	1.000	124	0%	129	27.9%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DLC1	10395	genome.wustl.edu	37	8	12943908	12943908	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182643.2	-1	reviewed	p.R1453C	1.000	117	0%	124	25.8%	18	11.1%	probably_damaging(0.965)	tolerated(0.13)	deleterious(0.659)	HMMPfam_START,HMMSmart_SM00234,superfamily_Bet v1-like
DLC1	10395	genome.wustl.edu	37	8	12950316	12950316	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182643.2	-1	reviewed	p.R1182H	1.000	27	0%	68	50%	13	7.6%	possibly_damaging(0.792)	deleterious(0.01)	deleterious(0.703)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
DLC1	10395	genome.wustl.edu	37	8	12952672	12952672	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182643.2	-1	reviewed	p.V1084M	1.000	35	0%	53	32.1%	19	10.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
DLC1	10395	genome.wustl.edu	37	8	12956082	12956082	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182643.2	-1	reviewed	p.H998R	1.000	93	0%	98	45.9%	9	44.4%	benign(0.003)	tolerated(0.65)	neutral(0.003)	NULL
TUSC3	7991	genome.wustl.edu	37	8	15519734	15519734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006765.2	+1	reviewed	p.G213C	0.992	386	0%	237	18.6%	297	22.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_OST3_OST6
CNOT7	29883	genome.wustl.edu	37	8	17092286	17092286	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013354.5	-1	reviewed	p.R186Q	0.994	320	0%	253	25.3%	110	26.3%	benign(0.233)	tolerated(0.25)	neutral(0.060)	HMMPfam_CAF1,superfamily_Ribonuclease H-like
SLC7A2	6542	genome.wustl.edu	37	8	17407881	17407881	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003046.5	+1	validated	p.T297M	0.892	248	0%	240	22.9%	0	-	benign(0.078)	deleterious(0.03)	neutral(0.370)	HMMPfam_AA_permease
SLC7A2	6542	genome.wustl.edu	37	8	17412462	17412462	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003046.5	+1	validated	p.G395S	1.000	446	0%	333	18.9%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_AA_permease
SLC7A2	6542	genome.wustl.edu	37	8	17421137	17421137	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003046.5	+1	validated	p.A605V	0.529	479	0%	378	27.5%	0	-	benign(0)	tolerated(0.67)	neutral(0.003)	NULL
MTUS1	57509	genome.wustl.edu	37	8	17510974	17510974	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001924.2	-1	reviewed	p.S1083L	0.178	314	0%	270	20%	7	0%	benign(0.015)	tolerated(0.24)	neutral(0.038)	NULL
MTUS1	57509	genome.wustl.edu	37	8	17573288	17573288	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001924.2	-1	reviewed	p.T858A	0.012	239	0%	219	38.8%	15	33.3%	benign(0.009)	deleterious(0)	neutral(0.445)	NULL
MTUS1	57509	genome.wustl.edu	37	8	17612042	17612042	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001924.2	-1	reviewed	p.T425	0.000	146	0%	198	71.7%	10	80%	-	-	-	NULL
PCM1	5108	genome.wustl.edu	37	8	17810632	17810632	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006197.3	+1	validated	p.K409Q	1.000	193	0%	158	25.9%	38	21%	probably_damaging(0.997)	tolerated(0.14)	deleterious(0.716)	NULL
PCM1	5108	genome.wustl.edu	37	8	17815134	17815134	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006197.3	+1	validated	p.E630	0.927	220	0%	228	22.4%	28	21.4%	-	-	-	NULL
ASAH1	427	genome.wustl.edu	37	8	17942296	17942296	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004315.4	-1	reviewed	p.I5	0.000	27	0%	65	52.3%	7	57.1%	-	-	-	NULL
PSD3	23362	genome.wustl.edu	37	8	18490156	18490156	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015310.3	-1	validated	p.R793W	1.000	326	0%	176	24.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
CSGALNACT1	55790	genome.wustl.edu	37	8	19266190	19266190	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130518.1	-1	validated	p.T415A	1.000	304	0%	210	64.8%	1	0%	probably_damaging(0.994)	tolerated(0.16)	deleterious(0.512)	HMMPfam_CHGN,superfamily_SSF53448
LPL	4023	genome.wustl.edu	37	8	19805714	19805714	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000311322	+1	known	p.E38K	0.995	93	0%	95	73.7%	0	-	possibly_damaging(0.804)	tolerated(0.46)	neutral(0.315)	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
SLC18A1	6570	genome.wustl.edu	37	8	20003281	20003281	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135691.2	-1	validated	p.E524G	0.924	72	0%	101	20.8%	0	-	benign(0.066)	tolerated(0.11)	neutral(0.276)	NULL
ATP6V1B2	526	genome.wustl.edu	37	8	20068118	20068118	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001693.3	+1	reviewed	p.G142C	1.000	337	0%	174	44.8%	73	38.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ATP6V1B2	526	genome.wustl.edu	37	8	20072362	20072362	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001693.3	+1	reviewed	p.R321	0.999	115	0%	67	11.9%	99	21.2%	-	-	-	HMMPfam_ATP-synt_ab,superfamily_P-loop containing nucleoside triphosphate hydrolases
XPO7	23039	genome.wustl.edu	37	8	21827087	21827087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100161.1	+1	validated	p.R87W	1.000	259	0%	222	10.8%	61	8.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IBN_N,superfamily_ARM repeat
XPO7	23039	genome.wustl.edu	37	8	21832234	21832234	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100161.1	+1	validated	p.R191	1.000	560	0.2%	502	21.3%	51	13.7%	-	-	-	superfamily_ARM repeat
NPM2	10361	genome.wustl.edu	37	8	21890687	21890687	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182795.1	+1	validated	p.L106R	0.892	62	0%	89	13.5%	26	11.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin-like core domain
FAM160B2	64760	genome.wustl.edu	37	8	21956559	21956559	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022749.5	+1	validated	p.A356T	1.000	48	0%	90	18.9%	56	17.8%	probably_damaging(0.968)	deleterious(0.01)	deleterious(0.816)	HMMPfam_RAI16-like
HR	55806	genome.wustl.edu	37	8	21983099	21983099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005144.4	-1	reviewed	p.R518W	0.000	19	0%	40	45%	0	-	possibly_damaging(0.926)	deleterious(0.02)	deleterious(0.758)	NULL
HR	55806	genome.wustl.edu	37	8	21986135	21986135	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005144.4	-1	reviewed	p.P183	0.004	10	0%	16	50%	0	-	-	-	-	NULL
LGI3	203190	genome.wustl.edu	37	8	22006274	22006274	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139278.2	-1	validated	p.S349F	1.000	12	0%	35	17.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EPTP
BMP1	649	genome.wustl.edu	37	8	22054347	22054347	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006129.4	+1	reviewed	p.G640	1.000	17	0%	49	20.4%	65	4.6%	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
BMP1	649	genome.wustl.edu	37	8	22066962	22066962	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006129.4	+1	reviewed	p.C860	0.759	21	0%	54	24.1%	28	14.2%	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
BMP1	649	genome.wustl.edu	37	8	22066963	22066963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006129.4	+1	reviewed	p.G861R	1.000	24	0%	56	32.1%	28	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
PIWIL2	55124	genome.wustl.edu	37	8	22212962	22212962	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135721.1	+1	validated	p.H956Y	1.000	74	0%	69	43.5%	0	-	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_Piwi,superfamily_Ribonuclease H-like
PDLIM2	64236	genome.wustl.edu	37	8	22452115	22452115	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176871.2	+1	validated	p.R352W	0.000	78	0%	98	41.8%	1	0%	unknown(0)	-	-	NULL
KIAA1967	57805	genome.wustl.edu	37	8	22472459	22472459	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021174.4	+1	validated	p.A384T	1.000	13	0%	34	55.9%	118	47.4%	possibly_damaging(0.915)	deleterious(0)	deleterious(0.811)	NULL
BIN3	55909	genome.wustl.edu	37	8	22478956	22478956	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018688.4	-1	reviewed	p.L247	1.000	37	0%	55	20%	51	23.5%	-	-	-	NULL
ENSG00000245025	0	genome.wustl.edu	37	8	22865436	22865436	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000502083	-1	known	NULL	0.000	16	0%	38	21.1%	1	0%	-	-	-	-
TNFRSF10B	8795	genome.wustl.edu	37	8	22886001	22886001	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003842.4	-1	reviewed	p.T197	0.001	76	0%	108	27.8%	46	26%	-	-	-	NULL
TNFRSF10B	8795	genome.wustl.edu	37	8	22886064	22886064	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003842.4	-1	reviewed	p.I176	0.000	91	0%	136	21.3%	62	20.9%	-	-	-	HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_TNF receptor-like
R3HCC1	203069	genome.wustl.edu	37	8	23148945	23148945	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136108.1	+1	validated	p.E121D	0.767	71	0%	123	26%	96	23.9%	benign(0.006)	tolerated(0.13)	neutral(0.253)	NULL
NKX3-1	4824	genome.wustl.edu	37	8	23538795	23538795	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006167.3	-1	validated	p.N215S	0.000	47	0%	94	29.8%	7	42.8%	benign(0.001)	tolerated(0.33)	neutral(0.024)	NULL
ADAM7	8756	genome.wustl.edu	37	8	24333986	24333986	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380789	+1	known	p.R225Q	0.989	344	0%	170	21.2%	0	-	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAM7	8756	genome.wustl.edu	37	8	24349474	24349474	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380789	+1	known	p.M472T	0.169	78	0%	58	55.2%	0	-	benign(0)	tolerated(0.33)	neutral(0.024)	HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin)
ADAM7	8756	genome.wustl.edu	37	8	24358371	24358371	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380789	+1	known	p.R691C	0.141	514	0%	336	17%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
NEFM	4741	genome.wustl.edu	37	8	24771775	24771775	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005382.2	+1	reviewed	p.L157M	1.000	8	0.000	16	0.250	2	0%	probably_damaging(0.993)	tolerated(0.16)	deleterious(0.510)	HMMPfam_Filament
NEFM	4741	genome.wustl.edu	37	8	24774859	24774859	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005382.2	+1	reviewed	p.E497	1.000	161	0%	182	23.1%	3	0%	-	-	-	NULL
NEFL	4747	genome.wustl.edu	37	8	24813260	24813260	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000221169	-1	known	p.A257V	1.000	26	0%	38	15.8%	0	-	-	-	-	HMMPfam_Filament
DOCK5	80005	genome.wustl.edu	37	8	25158123	25158123	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024940.6	+1	validated	p.G266R	1.000	232	0%	218	66.5%	11	72.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DOCK5	80005	genome.wustl.edu	37	8	25166346	25166346	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024940.6	+1	validated	p.P366L	1.000	66	0%	73	32.9%	9	55.5%	possibly_damaging(0.923)	tolerated(0.06)	deleterious(0.695)	NULL
DOCK5	80005	genome.wustl.edu	37	8	25247792	25247792	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024940.6	+1	validated	p.E1448D	1.000	42	2.4%	53	28.3%	9	22.2%	benign(0.245)	tolerated(0.69)	neutral(0.027)	NULL
EBF2	64641	genome.wustl.edu	37	8	25747376	25747376	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022659.2	-1	validated	p.S215P	1.000	57	0%	43	20.9%	0	-	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	NULL
PNMA2	10687	genome.wustl.edu	37	8	26365436	26365436	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007257.5	-1	validated	p.A279V	0.166	54	1.9%	74	47.3%	0	-	possibly_damaging(0.854)	tolerated(0.25)	neutral(0.366)	HMMPfam_Retrotrans_gag
PNMA2	10687	genome.wustl.edu	37	8	26366192	26366192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007257.5	-1	validated	p.P27L	0.099	84	0%	104	52.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DPYSL2	1808	genome.wustl.edu	37	8	26441470	26441470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001386.4	+1	validated	p.A95V	1.000	71	0%	95	25.3%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Amidohydro_1,superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases
DPYSL2	1808	genome.wustl.edu	37	8	26510752	26510752	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001386.4	+1	validated	p.A489V	1.000	54	0%	83	53%	9	11.1%	benign(0.103)	tolerated(0.54)	neutral(0.015)	NULL
ADRA1A	148	genome.wustl.edu	37	8	26721736	26721736	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033303.3	-1	reviewed	p.A251T	0.048	19	0%	42	42.9%	1	100%	benign(0)	tolerated(0.72)	neutral(0.002)	HMMPfam_7tm_1,superfamily_SSF81321
ADRA1A	148	genome.wustl.edu	37	8	26722109	26722109	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033303.3	-1	reviewed	p.I126	0.946	17	0%	41	73.2%	1	100%	-	-	-	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
PTK2B	2185	genome.wustl.edu	37	8	27255303	27255303	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004103.3	+1	reviewed	p.R68W	1.000	63	0%	54	42.6%	14	28.5%	benign(0.007)	deleterious(0)	neutral(0.445)	HMMSmart_SM00295
PTK2B	2185	genome.wustl.edu	37	8	27291044	27291044	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004103.3	+1	reviewed	p.G360	0.995	58	0%	84	46.4%	6	33.3%	-	-	-	NULL
PTK2B	2185	genome.wustl.edu	37	8	27293270	27293270	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004103.3	+1	reviewed	p.I401	1.000	31	0%	42	33.3%	8	0%	-	-	-	superfamily_Protein kinase-like (PK-like)
CHRNA2	1135	genome.wustl.edu	37	8	27319181	27319181	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000742.3	-1	reviewed	p.L519I	0.996	56	0%	94	43.6%	0	-	probably_damaging(0.999)	tolerated(1)	deleterious(0.490)	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore
EPHX2	2053	genome.wustl.edu	37	8	27364409	27364409	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001979.4	+1	reviewed	p.I186	0.000	64	0%	81	24.7%	12	25%	-	-	-	HMMPfam_Hydrolase,superfamily_SSF56784
CLU	1191	genome.wustl.edu	37	8	27457333	27457333	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001831.2	-1	reviewed	p.T428	0.064	50	0%	75	26.7%	811	26.7%	-	-	-	HMMPfam_Clusterin,HMMSmart_CLa
CLU	1191	genome.wustl.edu	37	8	27457476	27457476	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001831.2	-1	reviewed	p.E381K	0.032	76	0%	102	28.4%	679	21.6%	benign(0.07)	tolerated(0.13)	neutral(0.258)	HMMPfam_Clusterin,HMMSmart_CLa
CLU	1191	genome.wustl.edu	37	8	27462599	27462599	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001831.2	-1	reviewed	p.R276H	0.338	55	0%	97	29.9%	873	26.5%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	HMMPfam_Clusterin,HMMSmart_CLb
ESCO2	157570	genome.wustl.edu	37	8	27633925	27633925	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017420.2	+1	reviewed	p.H34Y	0.000	154	0%	123	17.1%	11	18.1%	benign(0)	tolerated(0.25)	neutral(0.037)	NULL
C8orf80	389643	genome.wustl.edu	37	8	27915773	27915773	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010906.1	-1	provisional	e8+2	1.000	131	0%	117	43.6%	0	-	-	-	-	-
C8orf80	389643	genome.wustl.edu	37	8	27922077	27922077	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010906.1	-1	provisional	p.G295C	0.994	66	0%	77	27.3%	0	-	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	superfamily_P-loop containing nucleoside triphosphate hydrolases
C8orf80	389643	genome.wustl.edu	37	8	27925085	27925085	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010906.1	-1	provisional	p.A219	0.000	151	0%	141	22%	0	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
C8orf80	389643	genome.wustl.edu	37	8	27931974	27931974	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010906.1	-1	provisional	e1-1	0.674	154	0%	132	22%	0	-	-	-	-	-
ELP3	55140	genome.wustl.edu	37	8	28017836	28017836	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018091.5	+1	validated	p.L450I	1.000	309	0%	215	46%	138	45.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Acetyltransf_1,superfamily_Acyl-CoA N-acyltransferases (Nat)
PNOC	5368	genome.wustl.edu	37	8	28196633	28196633	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006228.3	+1	validated	p.S68N	0.029	23	0%	42	42.9%	1	100%	benign(0.026)	deleterious(0.01)	neutral(0.407)	HMMPfam_Opiods_neuropep
ZNF395	55893	genome.wustl.edu	37	8	28209105	28209105	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018660.2	-1	validated	p.E380	0.080	17	0%	38	47.4%	86	50%	-	-	-	NULL
ZNF395	55893	genome.wustl.edu	37	8	28214227	28214227	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018660.2	-1	validated	p.P181	0.000	31	0%	57	21.1%	103	29.1%	-	-	-	NULL
EXTL3	2137	genome.wustl.edu	37	8	28574886	28574886	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001440.2	+1	provisional	p.G437E	1.000	25	0%	50	30%	36	50%	benign(0.005)	tolerated(0.14)	neutral(0.249)	HMMPfam_Exostosin
INTS9	55756	genome.wustl.edu	37	8	28628595	28628595	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018250.3	-1	reviewed	p.L522	0.847	33	0%	50	70%	51	58.8%	-	-	-	NULL
KIF13B	23303	genome.wustl.edu	37	8	28950367	28950367	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015254.3	-1	validated	p.L1451	1.000	110	0%	110	22.7%	40	0%	-	-	-	NULL
KIF13B	23303	genome.wustl.edu	37	8	28980909	28980909	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015254.3	-1	validated	p.S1151	1.000	36	0%	33	33.3%	27	44.4%	-	-	-	NULL
KIF13B	23303	genome.wustl.edu	37	8	29048512	29048512	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015254.3	-1	validated	e4+2	1.000	279	0.4%	243	21.8%	0	-	-	-	-	-
GSR	2936	genome.wustl.edu	37	8	30541683	30541683	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000637.2	-1	validated	p.V359I	0.988	257	0%	271	41.7%	183	45.9%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_Pyr_redox_2,superfamily_FAD/NAD(P)-binding domain
TEX15	56154	genome.wustl.edu	37	8	30701039	30701039	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031271.3	-1	validated	p.T1832I	1.000	201	0%	141	13.5%	3	33.3%	possibly_damaging(0.933)	tolerated(0.13)	deleterious(0.631)	NULL
TEX15	56154	genome.wustl.edu	37	8	30702692	30702692	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031271.3	-1	validated	p.D1281G	0.224	222	0%	134	41%	1	0%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
TEX15	56154	genome.wustl.edu	37	8	30702730	30702730	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031271.3	-1	validated	p.I1268M	0.990	224	0%	131	27.5%	1	100%	possibly_damaging(0.911)	deleterious(0.03)	deleterious(0.728)	NULL
TEX15	56154	genome.wustl.edu	37	8	30703763	30703763	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031271.3	-1	validated	p.S924Y	0.003	263	0%	190	67.4%	0	-	probably_damaging(0.981)	deleterious(0.04)	deleterious(0.774)	NULL
PURG	29942	genome.wustl.edu	37	8	30889534	30889534	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013357.2	-1	reviewed	p.D255	0.924	82	2.4%	103	26.2%	0	-	-	-	-	HMMPfam_PurA
NRG1	3084	genome.wustl.edu	37	8	32453413	32453413	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013956.3	+1	reviewed	p.R56	0.968	294	0%	162	38.3%	0	-	-	-	-	HMMSmart_IGc2,HMMPfam_ig,superfamily_SSF48726
NRG1	3084	genome.wustl.edu	37	8	32621398	32621398	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013956.3	+1	reviewed	p.A472	0.337	29	0%	29	17.2%	2	0%	-	-	-	HMMPfam_Neuregulin
FUT10	84750	genome.wustl.edu	37	8	33230203	33230203	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032664.3	-1	validated	p.I444M	0.318	137	0%	109	20.2%	4	0%	possibly_damaging(0.654)	tolerated(0.27)	neutral(0.264)	NULL
FUT10	84750	genome.wustl.edu	37	8	33246900	33246900	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032664.3	-1	validated	p.D265N	0.205	126	0.8%	118	18.6%	3	0%	benign(0.146)	tolerated(0.24)	neutral(0.050)	HMMPfam_Glyco_transf_10
FUT10	84750	genome.wustl.edu	37	8	33310718	33310718	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000416169	-1	known	p.R80H	0.003	109	0%	108	25%	2	50%	-	-	-	NULL
FUT10	84750	genome.wustl.edu	37	8	33310999	33310999	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032664.3	-1	validated	p.R37	0.685	192	0%	144	66.7%	8	75%	-	-	-	HMMPfam_Glyco_transf_10
MAK16	84549	genome.wustl.edu	37	8	33354773	33354773	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032509.3	+1	validated	p.V221	0.996	614	0%	498	27.9%	40	27.5%	-	-	-	HMMPfam_Mak16
UNC5D	137970	genome.wustl.edu	37	8	35425630	35425630	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080872.2	+1	validated	p.E113K	1.000	73	0%	73	28.8%	0	-	possibly_damaging(0.868)	deleterious(0)	deleterious(0.782)	superfamily_Immunoglobulin
UNC5D	137970	genome.wustl.edu	37	8	35544223	35544223	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080872.2	+1	validated	p.I360	0.995	95	1.1%	94	28.7%	0	-	-	-	-	HMMSmart_SM00209
UNC5D	137970	genome.wustl.edu	37	8	35583821	35583821	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080872.2	+1	validated	p.V485	0.921	150	0%	83	73.5%	0	-	-	-	-	PatternScan_SERPIN
UNC5D	137970	genome.wustl.edu	37	8	35647962	35647962	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080872.2	+1	validated	p.L915F	1.000	119	0%	74	20.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Death,HMMSmart_SM00005,superfamily_DEATH domain
ERLIN2	11160	genome.wustl.edu	37	8	37595466	37595466	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007175.6	+1	validated	p.A9V	1.000	226	0%	288	24.7%	29	20.6%	possibly_damaging(0.494)	tolerated(0.26)	neutral(0.199)	NULL
BRF2	55290	genome.wustl.edu	37	8	37706158	37706158	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018310.2	-1	reviewed	p.R57Q	1.000	301	0%	388	18.8%	28	28.5%	benign(0.054)	tolerated(0.78)	neutral(0.005)	NULL
RAB11FIP1	80223	genome.wustl.edu	37	8	37732663	37732663	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002814.2	-1	validated	p.A331V	0.952	94	0%	114	20.2%	39	10.2%	benign(0.129)	deleterious(0.04)	neutral(0.360)	NULL
RAB11FIP1	80223	genome.wustl.edu	37	8	37732818	37732818	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002814.2	-1	validated	p.A279	0.024	132	0%	129	41.1%	37	40.5%	-	-	-	NULL
ASH2L	9070	genome.wustl.edu	37	8	37996371	37996371	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004674.3	+1	validated	p.P586L	1.000	293	0%	360	10.8%	53	1.8%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
STAR	6770	genome.wustl.edu	37	8	38003605	38003605	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000349.2	-1	reviewed	p.G176*	1.000	16	0%	25	20%	0	-	-	-	-	HMMPfam_START,HMMSmart_SM00234,superfamily_Bet v1-like
STAR	6770	genome.wustl.edu	37	8	38005846	38005846	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000349.2	-1	reviewed	e3-1	1.000	30	0%	63	46%	0	-	-	-	-	-
WHSC1L1	54904	genome.wustl.edu	37	8	38133958	38133958	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023034.1	-1	reviewed	p.R1310*	1.000	425	0.9%	457	22.3%	22	13.6%	-	-	-	NULL
WHSC1L1	54904	genome.wustl.edu	37	8	38146958	38146958	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023034.1	-1	reviewed	p.E1062*	1.000	1197	0.1%	1124	10.2%	10	0%	-	-	-	superfamily_SET domain
FGFR1	2260	genome.wustl.edu	37	8	38271264	38271264	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023110.2	-1	reviewed	p.R784Q	0.995	15	0%	30	40%	496	48.3%	possibly_damaging(0.574)	deleterious(0.04)	deleterious(0.546)	NULL
FGFR1	2260	genome.wustl.edu	37	8	38285494	38285494	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023110.2	-1	reviewed	p.R189H	1.000	173	0%	254	40.6%	205	44.8%	benign(0.159)	tolerated(0.16)	neutral(0.073)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
PLEKHA2	59339	genome.wustl.edu	37	8	38810885	38810885	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000420274	+1	known	p.G258D	1.000	298	0%	302	19.9%	33	18.1%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
ADAM9	8754	genome.wustl.edu	37	8	38913151	38913151	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003816.2	+1	reviewed	p.E484G	1.000	291	0%	223	16.6%	82	24.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin)
IDO1	3620	genome.wustl.edu	37	8	39775465	39775465	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002164.4	+1	validated	p.G53	0.000	155	0%	135	21.5%	46	23.9%	-	-	-	HMMPfam_IDO
IDO2	169355	genome.wustl.edu	37	8	39821176	39821176	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194294.2	+1	validated	p.L63R	0.153	256	0%	199	21.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IDO
IDO2	169355	genome.wustl.edu	37	8	39847257	39847257	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194294.2	+1	validated	p.T202	0.086	91	0%	108	29.6%	0	-	-	-	-	HMMPfam_IDO
IDO2	169355	genome.wustl.edu	37	8	39873015	39873015	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194294.2	+1	validated	p.P386L	0.999	80	0%	67	43.3%	0	-	benign(0.416)	tolerated(0.26)	neutral(0.169)	HMMPfam_IDO
SFRP1	6422	genome.wustl.edu	37	8	41166417	41166417	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003012.4	-1	reviewed	p.A88T	1.000	9	0.000	32	0.250	43	11.6%	benign(0.008)	tolerated(0.21)	neutral(0.044)	superfamily_Frizzled_Cys-rich,HMMPfam_Fz,HMMSmart_FRI
SFRP1	6422	genome.wustl.edu	37	8	41166457	41166457	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003012.4	-1	reviewed	p.K74N	0.999	8	0.000	25	0.640	35	80%	benign(0)	tolerated(0.45)	neutral(0.012)	superfamily_Frizzled_Cys-rich,HMMPfam_Fz,HMMSmart_FRI
AGPAT6	137964	genome.wustl.edu	37	8	41467449	41467449	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178819.3	+1	validated	p.R171W	1.000	31	0%	70	75.7%	62	69.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AGPAT6	137964	genome.wustl.edu	37	8	41469749	41469749	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178819.3	+1	validated	p.P251L	0.999	99	0%	165	44.2%	73	52%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Acyltransferase,HMMSmart_SM00563
ANK1	286	genome.wustl.edu	37	8	41529949	41529949	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142446.1	-1	reviewed	p.V1714	1.000	90	0%	120	69.2%	0	-	-	-	-	NULL
ANK1	286	genome.wustl.edu	37	8	41543754	41543754	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142446.1	-1	reviewed	p.R1477*	1.000	41	0%	117	66.7%	0	-	-	-	-	HMMPfam_Death,HMMSmart_DEATH,superfamily_DEATH_like
ANK1	286	genome.wustl.edu	37	8	41550298	41550298	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142446.1	-1	reviewed	p.F1283	1.000	28	0%	47	25.5%	0	-	-	-	-	NULL
ANK1	286	genome.wustl.edu	37	8	41557061	41557061	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142446.1	-1	reviewed	p.E864*	0.988	125	0%	157	68.2%	0	-	-	-	-	superfamily_ANK
ANK1	286	genome.wustl.edu	37	8	41566384	41566384	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142446.1	-1	reviewed	p.T670M	1.000	14	0%	31	35.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
KAT6A	7994	genome.wustl.edu	37	8	41790305	41790305	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099412.1	-1	validated	p.T1811	0.009	143	0%	248	46%	71	38%	-	-	-	NULL
KAT6A	7994	genome.wustl.edu	37	8	41790635	41790635	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099412.1	-1	validated	p.P1701	0.237	31	0%	76	46.1%	6	16.6%	-	-	-	NULL
KAT6A	7994	genome.wustl.edu	37	8	41790689	41790689	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099412.1	-1	validated	p.P1683	0.003	15	0%	38	34.2%	5	20%	-	-	-	NULL
PLAT	5327	genome.wustl.edu	37	8	42033667	42033667	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000930.3	-1	reviewed	p.G511	0.494	43	0%	63	25.4%	17	11.7%	-	-	-	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_SER
PLAT	5327	genome.wustl.edu	37	8	42045454	42045454	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000930.3	-1	reviewed	p.E112K	0.000	72	0%	142	18.3%	7	0%	benign(0.002)	tolerated(0.78)	neutral(0.001)	HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Kringle-like
IKBKB	3551	genome.wustl.edu	37	8	42171898	42171898	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001556.1	+1	validated	p.G251R	1.000	305	0%	310	26.8%	25	28%	possibly_damaging(0.87)	deleterious(0)	deleterious(0.782)	superfamily_Kinase_like
IKBKB	3551	genome.wustl.edu	37	8	42175243	42175243	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001556.1	+1	validated	p.E398D	1.000	253	0%	253	24.5%	20	20%	benign(0.183)	tolerated(0.16)	neutral(0.076)	NULL
IKBKB	3551	genome.wustl.edu	37	8	42179668	42179668	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001556.1	+1	validated	p.L612H	1.000	80	0%	118	15.3%	38	10.5%	possibly_damaging(0.757)	deleterious(0)	deleterious(0.724)	NULL
SLC20A2	6575	genome.wustl.edu	37	8	42286326	42286326	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006749.3	-1	provisional	p.V582M	1.000	7	0.000	24	0.250	54	9.2%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_PHO4
SLC20A2	6575	genome.wustl.edu	37	8	42294991	42294991	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006749.3	-1	provisional	p.V347M	0.996	35	0%	61	24.6%	53	28.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PHO4
C8orf40	114926	genome.wustl.edu	37	8	42401716	42401716	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135674.1	+1	validated	p.L34R	1.000	442	0%	378	22.8%	86	25.5%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
CHRNB3	1142	genome.wustl.edu	37	8	42587122	42587122	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000749.3	+1	validated	p.T224	0.001	74	0%	100	27%	0	-	-	-	-	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
CHRNB3	1142	genome.wustl.edu	37	8	42587227	42587227	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000749.3	+1	validated	p.S259	0.009	188	0.5%	226	22.6%	0	-	-	-	-	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore
FNTA	2339	genome.wustl.edu	37	8	42914292	42914292	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002027.2	+1	reviewed	p.P86	1.000	165	0%	151	23.2%	46	13%	-	-	-	superfamily_Protein prenylyltransferase
SGK196	84197	genome.wustl.edu	37	8	42977610	42977610	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032237.3	+1	validated	p.Y215H	1.000	43	0%	54	18.5%	27	22.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,superfamily_Kinase_like
HGSNAT	138050	genome.wustl.edu	37	8	43037327	43037327	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152419.2	+1	reviewed	p.R351Q	0.994	372	0%	524	74.8%	72	69.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF2261
POTEA	340441	genome.wustl.edu	37	8	43157159	43157159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005365.2	+1	validated	p.V247I	0.029	516	0.2%	295	14.6%	0	-	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
POTEA	340441	genome.wustl.edu	37	8	43157171	43157171	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005365.2	+1	validated	p.L251F	0.056	543	0%	305	24.9%	0	-	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
POTEA	340441	genome.wustl.edu	37	8	43173648	43173648	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005365.2	+1	validated	p.E357A	0.076	1466	0%	1167	33.8%	0	-	-	-	-	NULL
ENSG00000215179	0	genome.wustl.edu	37	8	47885107	47885107	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000399732	-1	known	p.A375D	1.000	185	0%	156	25.6%	0	-	-	-	-	NULL
PRKDC	5591	genome.wustl.edu	37	8	48740743	48740743	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000314191	-1	known	p.V2854I	0.996	341	0%	330	25.8%	78	25.6%	benign(0.001)	tolerated(1)	-	superfamily_ARM repeat
PRKDC	5591	genome.wustl.edu	37	8	48776025	48776025	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000314191	-1	known	p.K1894N	1.000	346	0%	278	22.3%	57	26.3%	benign(0.282)	tolerated(0.14)	neutral(0.336)	HMMPfam_NUC194,superfamily_ARM repeat
PRKDC	5591	genome.wustl.edu	37	8	48798574	48798574	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081640.1	-1	validated	p.R1569Q	0.037	126	0%	147	25.2%	39	12.8%	-	-	-	NULL
PRKDC	5591	genome.wustl.edu	37	8	48815248	48815248	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000314191	-1	known	p.E1050	0.903	476	0%	510	47.6%	42	35.7%	-	-	-	superfamily_ARM repeat
PRKDC	5591	genome.wustl.edu	37	8	48852195	48852195	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000314191	-1	known	p.E343D	0.998	276	0%	231	44.6%	25	16%	probably_damaging(0.964)	tolerated(0.16)	neutral(0.466)	superfamily_ARM repeat
MCM4	4173	genome.wustl.edu	37	8	48877255	48877255	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005914.2	+1	reviewed	p.R272K	1.000	225	0%	211	66.4%	103	74.7%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMSmart_MCM,superfamily_Nucleic_acid_OB
UBE2V2	7336	genome.wustl.edu	37	8	48955700	48955700	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003350.2	+1	reviewed	p.T42A	1.000	148	0%	126	18.3%	125	21.6%	benign(0.007)	deleterious(0.04)	neutral(0.349)	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
UBE2V2	7336	genome.wustl.edu	37	8	48962499	48962499	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003350.2	+1	reviewed	p.T84	1.000	240	0%	187	19.8%	97	25.7%	-	-	-	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
EFCAB1	79645	genome.wustl.edu	37	8	49642334	49642334	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024593.3	-1	validated	p.E139A	1.000	505	0%	409	41.6%	10	50%	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	superfamily_SSF47473
EFCAB1	79645	genome.wustl.edu	37	8	49643161	49643161	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024593.3	-1	validated	p.V86A	0.706	341	0%	305	24.3%	10	10%	benign(0.019)	tolerated(0.38)	neutral(0.019)	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473
SNAI2	6591	genome.wustl.edu	37	8	49832540	49832540	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003068.3	-1	reviewed	p.T180	1.000	58	0%	94	14.9%	67	23.8%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
PXDNL	137902	genome.wustl.edu	37	8	52284463	52284463	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144651.4	-1	validated	p.D1291N	0.578	74	0%	88	20.5%	0	-	probably_damaging(0.966)	tolerated(0.8)	neutral(0.408)	superfamily_Heme-dependent peroxidases
PXDNL	137902	genome.wustl.edu	37	8	52721811	52721811	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144651.4	-1	validated	p.K32E	0.421	147	0%	205	24.4%	0	-	benign(0.001)	tolerated(1)	-	superfamily_L domain-like
PCMTD1	115294	genome.wustl.edu	37	8	52773807	52773807	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052937.2	-1	validated	e1-1	1.000	12	0%	14	50%	0	-	-	-	-	-
RB1CC1	9821	genome.wustl.edu	37	8	53569334	53569334	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014781.4	-1	reviewed	p.K1019Q	0.977	274	0%	169	63.3%	8	87.5%	benign(0.002)	tolerated(0.48)	neutral(0.011)	NULL
RB1CC1	9821	genome.wustl.edu	37	8	53573795	53573795	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014781.4	-1	reviewed	p.L469V	1.000	183	0%	115	54.8%	24	33.3%	benign(0)	deleterious(0.04)	neutral(0.349)	NULL
RB1CC1	9821	genome.wustl.edu	37	8	53589009	53589009	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014781.4	-1	reviewed	p.Y164	1.000	226	0%	165	46.1%	8	12.5%	-	-	-	NULL
OPRK1	4986	genome.wustl.edu	37	8	54142230	54142230	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000912.3	-1	validated	p.R257Q	1.000	40	0%	60	43.3%	24	66.6%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	HMMPfam_7tm_1,superfamily_SSF81321
OPRK1	4986	genome.wustl.edu	37	8	54147427	54147427	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000912.3	-1	validated	p.D168Y	1.000	60	0%	101	24.8%	17	29.4%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_7tm_1,superfamily_SSF81321
ATP6V1H	51606	genome.wustl.edu	37	8	54745624	54745624	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015941.2	-1	reviewed	p.D46N	1.000	313	0%	262	27.1%	68	33.8%	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_V-ATPase_H,superfamily_ARM repeat
RP1	6101	genome.wustl.edu	37	8	55542362	55542362	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006269.1	+1	reviewed	p.A1974S	0.000	179	0%	135	29.6%	0	-	possibly_damaging(0.477)	deleterious(0.02)	deleterious(0.540)	NULL
XKR4	114786	genome.wustl.edu	37	8	56436132	56436132	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052898.1	+1	provisional	p.F433	1.000	131	0%	198	27.8%	0	-	-	-	-	HMMPfam_XK-related
TGS1	96764	genome.wustl.edu	37	8	56699354	56699354	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024831.6	+1	validated	p.P299	0.000	173	0%	131	46.6%	16	56.2%	-	-	-	NULL
LYN	4067	genome.wustl.edu	37	8	56860184	56860184	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002350.2	+1	validated	p.E62	1.000	181	0%	181	23.8%	17	23.5%	-	-	-	superfamily_SH3-domain
LYN	4067	genome.wustl.edu	37	8	56860194	56860194	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002350.2	+1	validated	p.D66Y	0.762	190	0%	187	16%	17	5.8%	benign(0.009)	deleterious(0.03)	neutral(0.365)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
MOS	4342	genome.wustl.edu	37	8	57025703	57025703	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005372.1	-1	validated	p.S280L	0.032	19	0%	38	31.6%	0	-	possibly_damaging(0.454)	tolerated(0.7)	neutral(0.150)	superfamily_Kinase_like,HMMPfam_Pkinase
PLAG1	5324	genome.wustl.edu	37	8	57078943	57078943	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114634.1	-1	reviewed	p.S454	0.998	110	0%	76	67.1%	0	-	-	-	-	NULL
PLAG1	5324	genome.wustl.edu	37	8	57079469	57079469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114634.1	-1	reviewed	p.S279L	1.000	179	0%	123	31.7%	1	0%	benign(0.037)	deleterious(0.05)	neutral(0.347)	NULL
SDR16C6P	442388	genome.wustl.edu	37	8	57307880	57307880	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444271	-1	known	p.P15	0.050	145	0%	99	23.2%	0	-	-	-	-	NULL
IMPAD1	54928	genome.wustl.edu	37	8	57878771	57878771	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017813.3	-1	validated	p.I263L	0.998	63	0%	86	22.1%	75	26.6%	benign(0.076)	tolerated(0.36)	neutral(0.026)	HMMPfam_Inositol_P,superfamily_SSF56655
FAM110B	90362	genome.wustl.edu	37	8	59059062	59059062	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147189.2	+1	validated	p.R91	0.988	13	0%	22	36.4%	17	23.5%	-	-	-	NULL
CYP7A1	1581	genome.wustl.edu	37	8	59404069	59404069	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000780.3	-1	reviewed	p.D494N	1.000	118	0%	100	19%	1	0%	probably_damaging(0.976)	tolerated(0.1)	deleterious(0.704)	HMMPfam_p450,superfamily_Cytochrome_P450
TOX	9760	genome.wustl.edu	37	8	59728014	59728014	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014729.2	-1	reviewed	p.P425	0.007	80	0%	111	15.3%	7	0%	-	-	-	NULL
RAB2A	5862	genome.wustl.edu	37	8	61531203	61531203	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002865.1	+1	provisional	p.N180T	1.000	111	0%	57	35.1%	143	31.4%	benign(0)	tolerated(1)	-	HMMSmart_SM00176,superfamily_P-loop containing nucleoside triphosphate hydrolases
CHD7	55636	genome.wustl.edu	37	8	61654391	61654391	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.H134Y	1.000	24	0%	37	35.1%	1	100%	unknown(0)	deleterious(0.02)	-	NULL
CHD7	55636	genome.wustl.edu	37	8	61654507	61654507	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.P172	0.008	12	0%	37	59.5%	0	-	-	-	-	NULL
CHD7	55636	genome.wustl.edu	37	8	61654794	61654794	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.S268F	1.000	37	0%	42	38.1%	2	50%	possibly_damaging(0.449)	deleterious(0.01)	deleterious(0.552)	NULL
CHD7	55636	genome.wustl.edu	37	8	61754272	61754272	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.A1535T	1.000	447	0%	343	20.4%	6	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
CHD7	55636	genome.wustl.edu	37	8	61757546	61757546	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.E1658	1.000	78	0%	55	16.4%	2	50%	-	-	-	NULL
CHD7	55636	genome.wustl.edu	37	8	61763086	61763086	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.P1813	0.202	45	0%	44	18.2%	11	0%	-	-	-	NULL
CHD7	55636	genome.wustl.edu	37	8	61769032	61769032	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.R2398H	1.000	67	0%	51	13.7%	6	16.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CHD7	55636	genome.wustl.edu	37	8	61773526	61773526	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.P2558S	1.000	214	0%	169	40.2%	7	14.2%	benign(0.004)	tolerated(0.07)	neutral(0.319)	NULL
CHD7	55636	genome.wustl.edu	37	8	61778114	61778114	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017780.2	+1	reviewed	p.G2872	1.000	148	0%	175	19.4%	12	33.3%	-	-	-	NULL
ASPH	444	genome.wustl.edu	37	8	62460750	62460750	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004318.3	-1	reviewed	p.E548D	0.986	83	0%	87	27.6%	42	28.5%	benign(0.096)	tolerated(0.1)	neutral(0.293)	superfamily_SSF48452
ASPH	444	genome.wustl.edu	37	8	62557186	62557186	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004318.3	-1	reviewed	p.E209K	0.823	262	0%	131	19.8%	134	29.1%	probably_damaging(0.963)	deleterious(0.02)	deleterious(0.788)	HMMPfam_Asp-B-Hydro_N,superfamily_SSF48452
ASPH	444	genome.wustl.edu	37	8	62559373	62559373	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004318.3	-1	reviewed	p.E185D	0.000	480	0%	322	45.3%	101	44.5%	benign(0.009)	tolerated(1)	neutral(0.001)	HMMPfam_Asp-B-Hydro_N,superfamily_SSF48452
CYP7B1	9420	genome.wustl.edu	37	8	65528633	65528633	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004820.3	-1	reviewed	p.E155D	0.469	179	0%	103	11.7%	0	-	benign(0.073)	tolerated(0.28)	neutral(0.036)	superfamily_Cytochrome P450
CYP7B1	9420	genome.wustl.edu	37	8	65528709	65528709	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004820.3	-1	reviewed	p.K130T	0.000	191	0%	90	62.2%	0	-	benign(0.001)	tolerated(0.65)	neutral(0.003)	superfamily_Cytochrome P450
C8orf46	254778	genome.wustl.edu	37	8	67425830	67425830	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152765.3	+1	validated	p.A133V	0.001	20	0%	46	28.3%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
VCPIP1	80124	genome.wustl.edu	37	8	67547428	67547428	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025054.4	-1	validated	p.R993	1.000	204	0%	185	24.9%	11	27.2%	-	-	-	NULL
VCPIP1	80124	genome.wustl.edu	37	8	67577001	67577001	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025054.4	-1	validated	p.K731	1.000	250	0.4%	356	69.1%	11	81.8%	-	-	-	NULL
VCPIP1	80124	genome.wustl.edu	37	8	67577309	67577309	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025054.4	-1	validated	p.L629I	1.000	154	0%	159	24.5%	14	50%	benign(0.224)	tolerated(0.16)	neutral(0.081)	NULL
SGK3	23678	genome.wustl.edu	37	8	67759446	67759446	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033578.1	+1	reviewed	p.D365Y	1.000	229	0%	203	46.8%	8	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
C8orf45	157777	genome.wustl.edu	37	8	67808428	67808428	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173518.4	+1	validated	p.V435M	1.000	353	0.3%	328	23.8%	1	0%	benign(0.113)	deleterious(0.01)	neutral(0.415)	HMMSmart_SM00350
C8orf45	157777	genome.wustl.edu	37	8	67808545	67808545	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173518.4	+1	validated	p.K474*	0.999	250	0%	295	23.7%	0	-	-	-	-	HMMSmart_SM00350
CSPP1	79848	genome.wustl.edu	37	8	67999073	67999073	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077204.1	+1	validated	p.K143E	1.000	515	0%	432	44%	0	-	benign(0.401)	deleterious(0)	deleterious(0.574)	NULL
CSPP1	79848	genome.wustl.edu	37	8	68024268	68024268	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077204.1	+1	validated	p.E429D	1.000	270	0%	175	17.7%	11	0%	probably_damaging(0.996)	tolerated(0.07)	deleterious(0.780)	NULL
CSPP1	79848	genome.wustl.edu	37	8	68087596	68087596	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077204.1	+1	validated	p.E1042*	1.000	145	0%	152	26.3%	18	16.6%	-	-	-	NULL
CSPP1	79848	genome.wustl.edu	37	8	68102898	68102898	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077204.1	+1	validated	p.E1108	1.000	100	0%	100	20%	18	16.6%	-	-	-	NULL
ARFGEF1	10565	genome.wustl.edu	37	8	68138302	68138302	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006421.3	-1	reviewed	p.R1345*	1.000	96	0%	66	18.2%	61	3.2%	-	-	-	superfamily_ARM-type_fold
ARFGEF1	10565	genome.wustl.edu	37	8	68140468	68140468	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006421.3	-1	reviewed	p.N1138H	1.000	351	0%	202	75.2%	15	86.6%	possibly_damaging(0.822)	deleterious(0.01)	deleterious(0.717)	superfamily_ARM-type_fold
ARFGEF1	10565	genome.wustl.edu	37	8	68150667	68150667	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006421.3	-1	reviewed	p.R1067Q	1.000	149	0%	149	20.1%	31	9.6%	benign(0.392)	tolerated(0.51)	neutral(0.135)	superfamily_ARM-type_fold
ARFGEF1	10565	genome.wustl.edu	37	8	68213490	68213490	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006421.3	-1	reviewed	p.R94H	1.000	156	0%	129	26.4%	18	22.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM-type_fold
PREX2	80243	genome.wustl.edu	37	8	69017483	69017483	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025170.4	+1	validated	p.E942	0.000	143	0%	97	45.4%	4	50%	-	-	-	NULL
PREX2	80243	genome.wustl.edu	37	8	69058535	69058535	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024870.2	+1	validated	p.Q1393	0.946	696	0%	390	20.5%	21	23.8%	-	-	-	NULL
C8orf34	116328	genome.wustl.edu	37	8	69351843	69351843	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052958.1	+1	predicted	p.S35Y	1.000	167	0%	112	46.4%	5	60%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
C8orf34	116328	genome.wustl.edu	37	8	69445348	69445348	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052958.1	+1	predicted	p.D246Y	1.000	170	0%	117	28.2%	5	20%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SULF1	23213	genome.wustl.edu	37	8	70476335	70476335	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128204.1	+1	validated	p.R42Q	1.000	167	0%	121	25.6%	13	7.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
SULF1	23213	genome.wustl.edu	37	8	70533399	70533399	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128204.1	+1	validated	p.E503K	0.999	53	0%	67	28.4%	17	0%	benign(0)	tolerated(0.8)	neutral(0.001)	superfamily_Alkaline_phosphatase_core
SULF1	23213	genome.wustl.edu	37	8	70540442	70540442	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128204.1	+1	validated	p.E693	0.999	221	0%	159	64.2%	13	7.6%	-	-	-	superfamily_Alkaline_phosphatase_core
SLCO5A1	81796	genome.wustl.edu	37	8	70585343	70585343	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030958.2	-1	reviewed	p.R770W	0.999	60	0%	77	19.5%	2	50%	benign(0)	tolerated(0.12)	neutral(0.261)	superfamily_MFS_gen_substrate_transporter
SLCO5A1	81796	genome.wustl.edu	37	8	70591851	70591851	+	Missense_Mutation	SNP	G	G	A	rs140147912	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030958.2	-1	reviewed	p.R596W	0.592	66	0%	67	20.9%	2	50%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMSmart_KAZAL,HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895
SLCO5A1	81796	genome.wustl.edu	37	8	70744101	70744101	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030958.2	-1	reviewed	p.A270T	1.000	124	0%	129	13.2%	3	33.3%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
SLCO5A1	81796	genome.wustl.edu	37	8	70744209	70744209	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030958.2	-1	reviewed	p.D234N	1.000	47	0%	62	50%	3	66.6%	possibly_damaging(0.948)	tolerated(0.19)	neutral(0.441)	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
PRDM14	63978	genome.wustl.edu	37	8	70978570	70978570	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024504.2	-1	validated	p.E361D	1.000	179	0%	189	42.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SET,superfamily_SSF82199
PRDM14	63978	genome.wustl.edu	37	8	70981809	70981809	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024504.2	-1	validated	p.S96I	0.006	4	0.000	23	0.609	0	-	possibly_damaging(0.681)	deleterious(0.03)	deleterious(0.607)	NULL
NCOA2	10499	genome.wustl.edu	37	8	71068239	71068239	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006540.2	-1	validated	p.E787D	1.000	160	0%	144	43.1%	10	70%	possibly_damaging(0.604)	tolerated(0.39)	neutral(0.225)	NULL
XKR9	389668	genome.wustl.edu	37	8	71646035	71646035	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001011720.1	+1	provisional	p.A166	0.076	197	0%	155	41.9%	0	-	-	-	-	HMMPfam_XK-related
XKR9	389668	genome.wustl.edu	37	8	71646186	71646186	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001011720.1	+1	provisional	p.M217V	1.000	806	0%	542	20.5%	0	-	benign(0)	tolerated(0.41)	neutral(0.015)	HMMPfam_XK-related
EYA1	2138	genome.wustl.edu	37	8	72111651	72111651	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000503.4	-1	reviewed	p.A568V	0.965	22	0%	31	25.8%	0	-	benign(0.008)	deleterious(0)	neutral(0.445)	HMMPfam_Hydrolase
EYA1	2138	genome.wustl.edu	37	8	72156870	72156870	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000503.4	-1	reviewed	p.A370S	1.000	181	0%	163	41.7%	1	0%	benign(0.008)	tolerated(0.09)	neutral(0.296)	HMMPfam_Hydrolase
TRPA1	8989	genome.wustl.edu	37	8	72950218	72950218	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007332.2	-1	reviewed	p.Q795H	1.000	179	0%	108	20.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TRPA1	8989	genome.wustl.edu	37	8	72951975	72951975	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007332.2	-1	reviewed	p.L707V	1.000	361	0%	169	25.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LOC392232	392232	genome.wustl.edu	37	8	73140400	73140400	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_037363.2	-1	model	NULL	1.000	77	0%	44	13.6%	0	-	-	-	-	-
LOC392232	392232	genome.wustl.edu	37	8	73157251	73157251	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_037363.2	-1	model	NULL	0.967	117	0%	78	65.4%	0	-	-	-	-	-
KCNB2	9312	genome.wustl.edu	37	8	73848257	73848257	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004770.2	+1	reviewed	p.E223K	1.000	174	0.6%	202	24.3%	0	-	benign(0.006)	deleterious(0.02)	neutral(0.383)	superfamily_SSF81324
KCNB2	9312	genome.wustl.edu	37	8	73848532	73848532	+	Silent	SNP	C	C	T	rs145537672	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004770.2	+1	reviewed	p.L314	0.935	63	0%	68	29.4%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_SSF81324
UBE2W	55284	genome.wustl.edu	37	8	74722769	74722769	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001481.1	-1	validated	p.A113	0.989	88	0%	64	43.8%	33	45.4%	-	-	-	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
LOC100287016	100287016	genome.wustl.edu	37	8	74897004	74897004	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342849.1	+1	model	p.E93*	1.000	134	0.7%	118	23.7%	1	0%	-	-	-	HMMPfam_Cofilin_ADF,superfamily_Actin depolymerizing proteins
PI15	51050	genome.wustl.edu	37	8	75737672	75737672	+	Missense_Mutation	SNP	C	C	T	rs192682386	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015886.3	+1	reviewed	p.S63L	1.000	76	0%	37	67.6%	1	100%	probably_damaging(0.99)	tolerated(0.06)	deleterious(0.764)	superfamily_SCP-like_extracellular
CRISPLD1	83690	genome.wustl.edu	37	8	75925223	75925223	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031461.4	+1	validated	p.R159K	1.000	236	0%	126	27%	16	25%	benign(0.002)	tolerated(0.25)	neutral(0.037)	HMMSmart_SM00198,HMMPfam_SCP,superfamily_PR-1-like
HNF4G	3174	genome.wustl.edu	37	8	76456170	76456170	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004133.4	+1	validated	p.G71	0.975	137	0%	87	21.8%	2	100%	-	-	-	HMMPfam_zf-C4,HMMSmart_ZnF_C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_SSF57716
HNF4G	3174	genome.wustl.edu	37	8	76463634	76463634	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004133.4	+1	validated	p.E122*	1.000	99	1%	66	54.5%	1	0%	-	-	-	HMMPfam_zf-C4,superfamily_Str_ncl_receptor,superfamily_SSF57716
HNF4G	3174	genome.wustl.edu	37	8	76465279	76465279	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004133.4	+1	validated	p.I154	1.000	185	0%	89	76.4%	5	20%	-	-	-	superfamily_Str_ncl_receptor
HNF4G	3174	genome.wustl.edu	37	8	76465316	76465316	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004133.4	+1	validated	p.V167I	0.966	240	0%	114	23.7%	1	0%	benign(0)	tolerated(0.23)	neutral(0.042)	superfamily_Str_ncl_receptor
ZFHX4	79776	genome.wustl.edu	37	8	77616536	77616536	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024721.4	+1	validated	p.A71	1.000	46	0%	70	17.1%	0	-	-	-	-	NULL
ZFHX4	79776	genome.wustl.edu	37	8	77616698	77616698	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024721.4	+1	validated	p.E125D	0.990	100	0%	98	36.7%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
ZFHX4	79776	genome.wustl.edu	37	8	77617188	77617188	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024721.4	+1	validated	p.Y289H	1.000	567	0%	421	42%	0	-	benign(0.189)	-	-	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFHX4	79776	genome.wustl.edu	37	8	77618177	77618177	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024721.4	+1	validated	p.C618	0.935	50	2%	70	15.7%	0	-	-	-	-	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
ZFHX4	79776	genome.wustl.edu	37	8	77761900	77761900	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024721.4	+1	validated	p.T1221	0.138	87	0%	63	19%	0	-	-	-	-	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
ZFHX4	79776	genome.wustl.edu	37	8	77763746	77763746	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024721.4	+1	validated	p.T1485M	1.000	40	0%	22	50%	0	-	possibly_damaging(0.898)	-	-	NULL
ZFHX4	79776	genome.wustl.edu	37	8	77767130	77767130	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024721.4	+1	validated	p.A2613V	1.000	30	0%	30	16.7%	0	-	probably_damaging(0.998)	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1
ZBTB10	65986	genome.wustl.edu	37	8	81399514	81399514	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105539.1	+1	validated	p.G157W	1.000	6	0.000	12	0.500	15	53.3%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
ZNF704	619279	genome.wustl.edu	37	8	81577316	81577316	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033723.1	-1	provisional	p.R221C	1.000	80	0%	71	38%	25	56%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
ZFAND1	79752	genome.wustl.edu	37	8	82627345	82627345	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024699.2	-1	validated	p.T48N	0.612	246	0%	200	18%	33	18.1%	benign(0)	tolerated(0.82)	neutral(0.001)	HMMPfam_zf-AN1,HMMSmart_SM00154
CHMP4C	92421	genome.wustl.edu	37	8	82670443	82670443	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152284.3	+1	validated	p.R184C	0.007	234	0%	119	21.8%	32	15.6%	probably_damaging(0.965)	deleterious(0.03)	deleterious(0.771)	HMMPfam_Snf7
ENSG00000231942	0	genome.wustl.edu	37	8	82720129	82720129	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000417520	+1	known	p.T27	1.000	15	0%	12	75%	0	-	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
LRRCC1	85444	genome.wustl.edu	37	8	86021900	86021900	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033402.4	+1	validated	p.E59K	0.007	244	0%	224	64.3%	1	100%	benign(0)	tolerated(0.13)	neutral(0.253)	superfamily_Outer arm dynein light chain 1
LRRCC1	85444	genome.wustl.edu	37	8	86027485	86027485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033402.4	+1	validated	p.S232Y	0.993	97	0%	88	67%	10	60%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
LRRCC1	85444	genome.wustl.edu	37	8	86044165	86044165	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033402.4	+1	validated	p.A646D	1.000	278	0%	186	37.1%	17	58.8%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
CA3	761	genome.wustl.edu	37	8	86357415	86357415	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005181.3	+1	reviewed	p.F159L	0.000	367	0%	304	67.8%	3	66.6%	benign(0)	tolerated(0.55)	neutral(0.007)	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
CA3	761	genome.wustl.edu	37	8	86360276	86360276	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005181.3	+1	reviewed	p.R226Q	1.000	17	0%	25	28%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
ATP6V0D2	245972	genome.wustl.edu	37	8	87162504	87162504	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152565.1	+1	validated	p.A268V	0.999	74	0%	68	20.6%	0	-	probably_damaging(1)	tolerated(1)	deleterious(0.500)	HMMPfam_vATP-synt_AC39,superfamily_ATPase_V0/A0_c/d
WWP1	11059	genome.wustl.edu	37	8	87414286	87414286	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007013.3	+1	validated	p.V193A	0.213	114	0%	90	66.7%	22	77.2%	benign(0)	tolerated(0.46)	neutral(0.012)	NULL
WWP1	11059	genome.wustl.edu	37	8	87443954	87443954	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007013.3	+1	validated	p.R528H	1.000	204	0%	190	21.6%	26	23%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMSmart_SM00456,superfamily_WW domain
WWP1	11059	genome.wustl.edu	37	8	87447713	87447713	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007013.3	+1	validated	p.R545H	1.000	272	0%	255	67.5%	30	63.3%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	superfamily_Hect E3 ligase catalytic domain
CNGB3	54714	genome.wustl.edu	37	8	87616354	87616354	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019098.4	-1	reviewed	p.T583I	1.000	273	0%	189	45.5%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like
CNGB3	54714	genome.wustl.edu	37	8	87660039	87660039	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019098.4	-1	reviewed	p.R327M	0.998	240	0%	83	16.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CNBD1	168975	genome.wustl.edu	37	8	87878770	87878770	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173538.2	+1	provisional	p.A16D	0.000	185	0%	128	25.8%	0	-	possibly_damaging(0.635)	deleterious(0)	deleterious(0.666)	NULL
CNBD1	168975	genome.wustl.edu	37	8	87951945	87951945	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173538.2	+1	provisional	p.E132K	0.001	190	0%	114	10.5%	0	-	probably_damaging(0.991)	tolerated(0.19)	deleterious(0.493)	NULL
CNBD1	168975	genome.wustl.edu	37	8	88298885	88298885	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173538.2	+1	provisional	p.F343C	1.000	293	0%	120	27.5%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_cNMP_binding,superfamily_cNMP_binding
MMP16	4325	genome.wustl.edu	37	8	89054017	89054017	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005941.4	-1	reviewed	p.T499M	1.000	281	0.4%	174	71.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120
MMP16	4325	genome.wustl.edu	37	8	89086854	89086854	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005941.4	-1	reviewed	p.G401R	1.000	241	0%	133	23.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120
MMP16	4325	genome.wustl.edu	37	8	89209503	89209503	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005941.4	-1	reviewed	p.P55	0.787	121	0%	74	41.9%	3	100%	-	-	-	HMMPfam_PG_binding_1,superfamily_PGBD-like
OSGIN2	734	genome.wustl.edu	37	8	90921803	90921803	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001126111.1	+1	validated	p.S18N	0.981	215	0%	158	25.9%	7	14.2%	benign(0)	tolerated(0.33)	neutral(0.024)	NULL
CALB1	793	genome.wustl.edu	37	8	91081439	91081439	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004929.2	-1	reviewed	p.E86D	1.000	129	0%	92	68.5%	2	0%	benign(0.118)	deleterious(0)	neutral(0.454)	superfamily_EF-hand
NECAB1	64168	genome.wustl.edu	37	8	91893332	91893332	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022351.4	+1	validated	p.L111M	1.000	211	0%	132	50%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	superfamily_EF-hand
OTUD6B	51633	genome.wustl.edu	37	8	92083496	92083496	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016023.3	+1	validated	p.K101N	0.090	215	0.9%	228	20.2%	16	12.5%	benign(0.016)	tolerated(0.37)	neutral(0.019)	NULL
SLC26A7	115111	genome.wustl.edu	37	8	92330588	92330588	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_134266.1	+1	reviewed	p.G208R	1.000	256	0%	143	22.4%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sulfate_transp
SLC26A7	115111	genome.wustl.edu	37	8	92355683	92355683	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_134266.1	+1	reviewed	p.A377S	0.958	143	0%	101	25.7%	6	16.6%	benign(0.018)	deleterious(0.01)	neutral(0.406)	HMMPfam_Sulfate_transp
RBM12B	389677	genome.wustl.edu	37	8	94748379	94748379	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203390.2	-1	validated	p.R87I	1.000	341	0%	320	68.8%	9	66.6%	probably_damaging(0.966)	deleterious(0)	deleterious(0.853)	superfamily_RNA-binding domain RBD
RBM12B	389677	genome.wustl.edu	37	8	94748580	94748580	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203390.2	-1	validated	p.R20H	1.000	62	0%	74	17.6%	4	75%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00360
PDP1	54704	genome.wustl.edu	37	8	94934270	94934270	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000396200	+1	known	p.P46S	1.000	91	0%	149	42.3%	35	57.1%	possibly_damaging(0.789)	deleterious(0)	deleterious(0.740)	NULL
PDP1	54704	genome.wustl.edu	37	8	94934551	94934551	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018444.3	+1	reviewed	p.I88	1.000	236	0%	242	43.8%	21	38%	-	-	-	superfamily_Protein serine/threonine phosphatase 2C catalytic domain
PDP1	54704	genome.wustl.edu	37	8	94934897	94934897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018444.3	+1	reviewed	p.A204S	1.000	135	0%	143	25.9%	21	28.5%	benign(0.012)	tolerated(0.67)	neutral(0.003)	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain
GEM	2669	genome.wustl.edu	37	8	95272414	95272414	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005261.3	-1	reviewed	p.C106	0.869	26	0%	56	14.3%	36	16.6%	-	-	-	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,superfamily_P-loop containing nucleoside triphosphate hydrolases
RAD54B	25788	genome.wustl.edu	37	8	95416359	95416359	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012415.2	-1	reviewed	p.R297Q	1.000	283	0%	162	24.1%	8	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_DEXDc,superfamily_SSF52540
KIAA1429	25962	genome.wustl.edu	37	8	95504926	95504926	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015496.3	-1	validated	p.G1588*	1.000	395	0%	365	22.2%	36	2.7%	-	-	-	NULL
KIAA1429	25962	genome.wustl.edu	37	8	95538526	95538526	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015496.3	-1	validated	p.P649H	1.000	322	0%	210	37.6%	22	68.1%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	NULL
ESRP1	54845	genome.wustl.edu	37	8	95677269	95677269	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017697.3	+1	validated	p.M290I	1.000	190	0%	234	46.6%	121	49.5%	benign(0.163)	tolerated(0.88)	neutral(0.015)	HMMSmart_SM00360,superfamily_RNA-binding domain RBD
DPY19L4	286148	genome.wustl.edu	37	8	95746906	95746906	+	Missense_Mutation	SNP	C	C	T	rs147410800	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181787.2	+1	validated	p.A59V	1.000	336	0%	376	72.3%	7	57.1%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_DUF2211
DPY19L4	286148	genome.wustl.edu	37	8	95774027	95774027	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181787.2	+1	validated	p.L279	0.999	456	0%	382	22.3%	11	18.1%	-	-	-	HMMPfam_DUF2211
INTS8	55656	genome.wustl.edu	37	8	95877917	95877917	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017864.2	+1	provisional	p.R754W	1.000	264	0%	292	43.8%	44	34%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C8orf38	137682	genome.wustl.edu	37	8	96044228	96044228	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152416.2	+1	reviewed	p.R68Q	1.000	273	0%	257	24.5%	20	20%	possibly_damaging(0.526)	tolerated(0.26)	neutral(0.211)	HMMPfam_SQS_PSY,superfamily_Terpenoid synthases
GDF6	392255	genome.wustl.edu	37	8	97156944	97156944	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000435084	-1	known	p.A322T	0.994	32	0%	80	16.3%	4	75%	unknown(0)	-	-	NULL
CPQ	10404	genome.wustl.edu	37	8	97797502	97797502	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016134.2	+1	provisional	p.R126I	0.155	106	0%	70	32.9%	45	20%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TSPYL5	85453	genome.wustl.edu	37	8	98289482	98289482	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033512.2	-1	validated	p.A197	0.000	49	0%	79	62%	0	-	-	-	-	NULL
TSPYL5	85453	genome.wustl.edu	37	8	98289557	98289557	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033512.2	-1	validated	p.A172	0.001	55	0%	70	60%	0	-	-	-	-	NULL
MTDH	92140	genome.wustl.edu	37	8	98712029	98712029	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178812.3	+1	validated	p.W366R	1.000	484	0%	352	21.9%	128	30.4%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
MTDH	92140	genome.wustl.edu	37	8	98735143	98735143	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178812.3	+1	validated	p.P520S	1.000	174	0%	162	20.4%	126	21.4%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
MATN2	4147	genome.wustl.edu	37	8	98973663	98973663	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002380.3	+1	reviewed	p.H288R	0.978	60	0%	54	16.7%	60	36.6%	benign(0.119)	deleterious(0)	neutral(0.454)	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
C8orf47	203111	genome.wustl.edu	37	8	99105481	99105481	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173549.2	+1	validated	p.E349K	0.548	250	0%	205	22%	15	20%	unknown(0)	-	-	NULL
POP1	10940	genome.wustl.edu	37	8	99158878	99158878	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015029.2	+1	reviewed	p.C559	1.000	404	0%	307	24.4%	5	60%	-	-	-	NULL
POP1	10940	genome.wustl.edu	37	8	99162777	99162777	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015029.2	+1	reviewed	p.S656L	0.985	188	0%	179	23.5%	7	42.8%	benign(0.291)	tolerated(0.06)	neutral(0.412)	HMMPfam_POPLD
POP1	10940	genome.wustl.edu	37	8	99170199	99170199	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015029.2	+1	reviewed	p.R925	0.000	19	0%	31	77.4%	12	58.3%	-	-	-	NULL
NIPAL2	79815	genome.wustl.edu	37	8	99215392	99215392	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024759.1	-1	provisional	p.T275M	0.058	233	0%	188	41%	4	0%	benign(0.003)	tolerated(0.08)	neutral(0.300)	HMMPfam_DUF803
STK3	6788	genome.wustl.edu	37	8	99591893	99591893	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006281.2	-1	validated	p.S316L	1.000	752	0%	445	69.4%	35	65.7%	possibly_damaging(0.801)	tolerated(0.07)	deleterious(0.621)	NULL
OSR2	116039	genome.wustl.edu	37	8	99961232	99961232	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142462.1	+1	validated	p.L18I	1.000	10	0%	21	23.8%	25	12%	possibly_damaging(0.666)	deleterious(0)	deleterious(0.680)	NULL
VPS13B	157680	genome.wustl.edu	37	8	100155260	100155260	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017890.3	+1	reviewed	p.Q570	1.000	224	0%	193	23.8%	3	33.3%	-	-	-	NULL
VPS13B	157680	genome.wustl.edu	37	8	100523567	100523567	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017890.3	+1	reviewed	p.A1512G	1.000	331	0%	218	28%	2	0%	benign(0.282)	tolerated(0.43)	neutral(0.100)	NULL
VPS13B	157680	genome.wustl.edu	37	8	100654082	100654082	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017890.3	+1	reviewed	p.G1780D	0.194	53	0%	47	17%	5	0%	benign(0.2)	tolerated(0.61)	neutral(0.023)	NULL
VPS13B	157680	genome.wustl.edu	37	8	100831756	100831756	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017890.3	+1	reviewed	p.G2938E	1.000	157	0%	86	24.4%	5	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
VPS13B	157680	genome.wustl.edu	37	8	100866425	100866425	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017890.3	+1	reviewed	p.A3628V	1.000	53	0%	70	30%	13	23%	probably_damaging(0.987)	deleterious(0.03)	deleterious(0.801)	NULL
RGS22	26166	genome.wustl.edu	37	8	101011490	101011490	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015668.3	-1	validated	p.K983N	1.000	147	0%	104	20.2%	0	-	probably_damaging(0.978)	deleterious(0.02)	deleterious(0.803)	NULL
RGS22	26166	genome.wustl.edu	37	8	101092468	101092468	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015668.3	-1	validated	p.R78Q	0.997	446	0%	344	69.2%	0	-	probably_damaging(0.997)	tolerated(0.28)	deleterious(0.498)	NULL
SPAG1	6674	genome.wustl.edu	37	8	101252746	101252746	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003114.3	+1	reviewed	p.P799L	0.000	134	1.5%	130	48.5%	8	37.5%	benign(0)	tolerated(0.46)	neutral(0.012)	superfamily_Protein prenylyltransferase
RNF19A	25897	genome.wustl.edu	37	8	101271182	101271182	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015435.3	-1	reviewed	p.E707*	1.000	403	0.5%	273	44.7%	43	60.4%	-	-	-	NULL
PABPC1	26986	genome.wustl.edu	37	8	101730421	101730421	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002568.3	-1	validated	p.R94H	1.000	247	0%	253	20.2%	1165	20.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_RNA-binding domain RBD
YWHAZ	7534	genome.wustl.edu	37	8	101937190	101937190	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135699.1	-1	reviewed	p.D124E	1.000	109	0%	101	25.7%	596	28.1%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_14-3-3,HMMSmart_SM00101,superfamily_14-3-3 protein
NCALD	83988	genome.wustl.edu	37	8	102701581	102701581	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040624.1	-1	reviewed	p.V180M	1.000	36	0%	64	17.2%	29	13.7%	probably_damaging(0.966)	tolerated(0.09)	deleterious(0.704)	superfamily_EF-hand
UBR5	51366	genome.wustl.edu	37	8	103324017	103324017	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015902.4	-1	reviewed	p.S788	1.000	193	0.5%	191	21.5%	18	27.7%	-	-	-	NULL
UBR5	51366	genome.wustl.edu	37	8	103357660	103357660	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015902.4	-1	reviewed	p.R284C	1.000	161	0%	172	66.9%	19	57.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ODF1	4956	genome.wustl.edu	37	8	103572688	103572688	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024410.3	+1	reviewed	p.R110K	1.000	135	0%	116	19.8%	0	-	possibly_damaging(0.888)	deleterious(0)	deleterious(0.792)	NULL
ODF1	4956	genome.wustl.edu	37	8	103573084	103573084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024410.3	+1	reviewed	p.R242Q	1.000	20	0%	30	70%	0	-	unknown(0)	deleterious(0)	-	NULL
FZD6	8323	genome.wustl.edu	37	8	104340562	104340562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003506.3	+1	reviewed	p.G487S	1.000	421	0%	247	38.5%	14	35.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Frizzled
CTHRC1	115908	genome.wustl.edu	37	8	104388228	104388228	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000415886	+1	known	p.G138D	0.003	35	0%	37	10.8%	0	-	unknown(0)	deleterious(0)	-	NULL
RIMS2	9699	genome.wustl.edu	37	8	104898105	104898105	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100117.1	+1	validated	p.Q426H	1.000	71	0%	37	43.2%	0	-	benign(0.002)	tolerated(0.17)	neutral(0.059)	NULL
RIMS2	9699	genome.wustl.edu	37	8	104948865	104948865	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100117.1	+1	validated	p.R821Q	1.000	215	0%	191	21.5%	0	-	possibly_damaging(0.933)	deleterious(0.04)	deleterious(0.728)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
RIMS2	9699	genome.wustl.edu	37	8	105025822	105025822	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100117.1	+1	validated	p.S1066Y	1.000	90	0%	72	19.4%	0	-	probably_damaging(0.984)	tolerated(0.56)	neutral(0.437)	NULL
RIMS2	9699	genome.wustl.edu	37	8	105026801	105026801	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100117.1	+1	validated	p.R1098*	0.998	113	0%	76	42.1%	0	-	-	-	-	NULL
RIMS2	9699	genome.wustl.edu	37	8	105257190	105257190	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100117.1	+1	validated	p.E1127D	0.992	91	0%	48	18.8%	1	0%	possibly_damaging(0.775)	deleterious(0.01)	deleterious(0.694)	NULL
DPYS	1807	genome.wustl.edu	37	8	105405171	105405171	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001385.2	-1	reviewed	p.F428	0.997	100	0%	75	74.7%	0	-	-	-	-	superfamily_Metalo_hydrolase
DPYS	1807	genome.wustl.edu	37	8	105463594	105463594	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001385.2	-1	reviewed	p.F101	0.894	49	0%	52	65.4%	0	-	-	-	-	HMMPfam_Amidohydro_1,superfamily_SSF51556
LRP12	29967	genome.wustl.edu	37	8	105502997	105502997	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013437.4	-1	reviewed	p.R828	1.000	203	0%	156	47.4%	17	47%	-	-	-	NULL
OXR1	55074	genome.wustl.edu	37	8	107695484	107695484	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018002.2	+1	validated	p.E121K	1.000	369	0%	291	22%	21	28.5%	probably_damaging(0.974)	tolerated(0.1)	deleterious(0.702)	HMMSmart_SM00257,HMMPfam_LysM,superfamily_LysM domain
OXR1	55074	genome.wustl.edu	37	8	107758069	107758069	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018002.2	+1	validated	p.S795L	1.000	590	0.3%	401	43.4%	26	46.1%	possibly_damaging(0.712)	deleterious(0)	deleterious(0.702)	HMMPfam_TLD,HMMSmart_SM00584
ANGPT1	284	genome.wustl.edu	37	8	108296964	108296964	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001146.3	-1	reviewed	p.R384Q	0.996	248	0%	155	44.5%	5	40%	benign(0.001)	tolerated(0.64)	neutral(0.003)	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like
EIF3E	3646	genome.wustl.edu	37	8	109240563	109240563	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001568.2	-1	validated	p.L219M	1.000	240	0%	170	21.2%	632	24.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
NUDCD1	84955	genome.wustl.edu	37	8	110287683	110287683	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032869.3	-1	validated	p.W357*	1.000	214	0.5%	166	47%	43	16.2%	-	-	-	superfamily_HSP20-like chaperones
PKHD1L1	93035	genome.wustl.edu	37	8	110416854	110416854	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177531.4	+1	validated	p.R482Q	0.011	268	0%	149	67.1%	37	72.9%	benign(0.061)	tolerated(0.61)	neutral(0.008)	HMMSmart_SM00758
PKHD1L1	93035	genome.wustl.edu	37	8	110453000	110453000	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177531.4	+1	validated	p.G1340C	1.000	406	0%	202	22.8%	14	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
PKHD1L1	93035	genome.wustl.edu	37	8	110477165	110477165	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177531.4	+1	validated	p.A2702T	1.000	157	0%	145	23.4%	37	40.5%	possibly_damaging(0.853)	deleterious(0.03)	deleterious(0.693)	NULL
PKHD1L1	93035	genome.wustl.edu	37	8	110487475	110487475	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177531.4	+1	validated	p.T2912A	0.327	265	0%	156	39.1%	22	40.9%	benign(0.026)	tolerated(0.26)	neutral(0.035)	NULL
PKHD1L1	93035	genome.wustl.edu	37	8	110497366	110497366	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177531.4	+1	validated	p.L3224I	1.000	348	0%	105	17.1%	44	25%	benign(0.03)	tolerated(0.3)	neutral(0.030)	superfamily_Pectin lyase-like
PKHD1L1	93035	genome.wustl.edu	37	8	110520341	110520341	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177531.4	+1	validated	p.S3748L	1.000	239	0%	144	44.4%	41	14.6%	benign(0.11)	tolerated(0.21)	neutral(0.052)	NULL
PKHD1L1	93035	genome.wustl.edu	37	8	110535017	110535017	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177531.4	+1	validated	p.H4076	0.002	61	1.6%	39	12.8%	151	7.2%	-	-	-	NULL
CSMD3	114788	genome.wustl.edu	37	8	113237037	113237037	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.F3696C	1.000	331	0%	401	70.3%	0	-	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	NULL
CSMD3	114788	genome.wustl.edu	37	8	113241093	113241093	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.S3619Y	1.000	247	0%	155	73.5%	0	-	probably_damaging(0.983)	deleterious(0.04)	deleterious(0.778)	NULL
CSMD3	114788	genome.wustl.edu	37	8	113246689	113246689	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.E3549*	1.000	369	0%	267	24.3%	0	-	-	-	-	NULL
CSMD3	114788	genome.wustl.edu	37	8	113349921	113349921	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.R2231Q	1.000	149	0%	86	77.9%	0	-	probably_damaging(1)	tolerated(0.86)	deleterious(0.500)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD3	114788	genome.wustl.edu	37	8	113649184	113649184	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.R1193*	0.905	221	0%	145	59.3%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD3	114788	genome.wustl.edu	37	8	113651096	113651096	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.D1119Y	1.000	113	0%	82	28%	0	-	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD3	114788	genome.wustl.edu	37	8	113988098	113988098	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.R437I	1.000	415	0%	262	72.5%	0	-	unknown(0)	deleterious(0)	-	NULL
CSMD3	114788	genome.wustl.edu	37	8	114031300	114031300	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.Y342	1.000	247	0%	270	28.5%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD3	114788	genome.wustl.edu	37	8	114326923	114326923	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198123.1	-1	validated	p.W93*	1.000	470	0%	420	50%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
TRPS1	7227	genome.wustl.edu	37	8	116426930	116426930	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014112.2	-1	reviewed	p.S1069Y	1.000	348	0%	203	21.7%	30	20%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
EIF3H	8667	genome.wustl.edu	37	8	117668111	117668111	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003756.2	-1	validated	p.L231I	1.000	175	0%	121	24.8%	719	24.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SLC30A8	169026	genome.wustl.edu	37	8	118175669	118175669	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173851.2	+1	reviewed	p.E243	0.996	369	0%	261	58.6%	0	-	-	-	-	HMMPfam_Cation_efflux
MED30	90390	genome.wustl.edu	37	8	118533268	118533268	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080651.2	+1	validated	p.I51	1.000	12	0%	10	40%	45	40%	-	-	-	NULL
EXT1	2131	genome.wustl.edu	37	8	119122606	119122606	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000127.2	-1	reviewed	p.R227Q	1.000	50	0%	83	59%	46	56.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Exostosin
NOV	4856	genome.wustl.edu	37	8	120430356	120430356	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002514.3	+1	reviewed	p.F123L	0.984	122	0%	153	25.5%	39	17.9%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_VWC,HMMSmart_VWC
ENPP2	5168	genome.wustl.edu	37	8	120650706	120650706	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006209.3	-1	reviewed	p.R32Q	1.000	220	0%	163	25.8%	12	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TAF2	6873	genome.wustl.edu	37	8	120818589	120818589	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003184.3	-1	reviewed	p.D118N	1.000	155	0%	137	48.2%	14	71.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Peptidase_M1,superfamily_SSF63737
MTBP	27085	genome.wustl.edu	37	8	121463439	121463439	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022045.3	+1	provisional	p.H101P	1.000	429	0%	326	19.9%	2	0%	possibly_damaging(0.517)	tolerated(0.23)	neutral(0.215)	NULL
HAS2	3037	genome.wustl.edu	37	8	122626655	122626655	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005328.2	-1	reviewed	p.K451N	1.000	73	0%	90	30%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
WDR67	93594	genome.wustl.edu	37	8	124113171	124113171	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145647.3	+1	validated	p.R319Q	1.000	243	0%	151	20.5%	7	28.5%	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	HMMSmart_SM00320,superfamily_WD40 repeat-like
WDR67	93594	genome.wustl.edu	37	8	124117676	124117676	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145647.3	+1	validated	p.D394G	0.002	183	0%	132	20.5%	4	25%	benign(0.273)	tolerated(0.43)	neutral(0.043)	NULL
WDR67	93594	genome.wustl.edu	37	8	124121566	124121566	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145647.3	+1	validated	p.P407S	0.982	315	0%	181	26%	5	40%	benign(0.001)	tolerated(1)	-	NULL
ZHX1	11244	genome.wustl.edu	37	8	124266351	124266351	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017926.1	-1	reviewed	p.I612	0.992	600	0%	347	67.7%	7	57.1%	-	-	-	HMMSmart_HOX,superfamily_Homeodomain_like
ZHX1	11244	genome.wustl.edu	37	8	124266956	124266956	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017926.1	-1	reviewed	p.A411S	0.998	107	0%	104	48.1%	27	48.1%	benign(0.001)	tolerated(1)	-	NULL
ATAD2	29028	genome.wustl.edu	37	8	124358331	124358331	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014109.3	-1	reviewed	p.A843T	1.000	161	0%	137	16.8%	36	19.4%	possibly_damaging(0.94)	tolerated(0.11)	deleterious(0.657)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ATAD2	29028	genome.wustl.edu	37	8	124371923	124371923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014109.3	-1	reviewed	p.C387Y	1.000	168	0%	154	24%	25	32%	probably_damaging(0.974)	tolerated(0.17)	deleterious(0.475)	NULL
FAM91A1	157769	genome.wustl.edu	37	8	124787436	124787436	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144963.2	+1	validated	p.K69	0.999	241	0%	198	48%	23	60.8%	-	-	-	NULL
FAM91A1	157769	genome.wustl.edu	37	8	124796718	124796718	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144963.2	+1	validated	p.L238I	1.000	536	0%	309	10%	21	4.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM91A1	157769	genome.wustl.edu	37	8	124799504	124799504	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144963.2	+1	validated	p.D361G	1.000	74	0%	55	41.8%	42	57.1%	benign(0.005)	tolerated(0.23)	neutral(0.042)	NULL
TRMT12	55039	genome.wustl.edu	37	8	125464045	125464045	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017956.3	+1	validated	p.D293Y	1.000	59	0%	61	26.2%	16	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Met_10,superfamily_SSF53335
TATDN1	83940	genome.wustl.edu	37	8	125528185	125528185	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032026.3	-1	validated	p.L97	0.996	325	0%	252	11.5%	85	17.6%	-	-	-	HMMPfam_TatD_DNase,superfamily_Metallo-dependent hydrolases
ZNF572	137209	genome.wustl.edu	37	8	125989012	125989012	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152412.2	+1	validated	p.C168G	0.984	68	0%	57	64.9%	0	-	benign(0.005)	tolerated(0.23)	neutral(0.042)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
KIAA0196	9897	genome.wustl.edu	37	8	126056810	126056810	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014846.3	-1	reviewed	p.L879I	1.000	161	0%	146	24%	33	12.1%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_Strumpellin
NSMCE2	286053	genome.wustl.edu	37	8	126370044	126370044	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173685.2	+1	validated	p.R204W	0.017	85	0%	80	48.7%	78	42.3%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_SSF57850
TRIB1	10221	genome.wustl.edu	37	8	126445744	126445744	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025195.2	+1	validated	p.A182	0.015	54	0%	70	27.1%	19	26.3%	-	-	-	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
POU5F1B	5462	genome.wustl.edu	37	8	128428985	128428985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000391675	+1	known	p.A292T	0.001	18	0%	36	16.7%	4	0%	benign(0.003)	tolerated(0.09)	neutral(0.296)	NULL
FAM49B	51571	genome.wustl.edu	37	8	130861569	130861569	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000311292	-1	known	p.L207P	1.000	192	0.5%	144	19.4%	89	24.7%	possibly_damaging(0.795)	deleterious(0.01)	deleterious(0.704)	HMMPfam_DUF1394
ASAP1	50807	genome.wustl.edu	37	8	131138205	131138205	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018482.2	-1	validated	p.L504	1.000	124	0%	116	19%	19	42.1%	-	-	-	HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ArfGAP
ADCY8	114	genome.wustl.edu	37	8	131922006	131922006	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001115.2	-1	reviewed	p.W530G	1.000	194	0%	155	21.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase,PatternScan_GUANYLATE_CYCLASE_1
ADCY8	114	genome.wustl.edu	37	8	131964127	131964127	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001115.2	-1	reviewed	p.Y410H	1.000	74	0%	100	24%	0	-	probably_damaging(1)	tolerated(0.89)	deleterious(0.500)	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
ADCY8	114	genome.wustl.edu	37	8	132051858	132051858	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001115.2	-1	reviewed	p.Y241C	1.000	15	0%	31	19.4%	0	-	possibly_damaging(0.928)	deleterious(0)	deleterious(0.820)	NULL
EFR3A	23167	genome.wustl.edu	37	8	132982784	132982784	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015137.3	+1	validated	p.F351	0.719	152	0%	143	70.6%	15	66.6%	-	-	-	superfamily_ARM repeat
EFR3A	23167	genome.wustl.edu	37	8	132982840	132982840	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015137.3	+1	validated	p.S370Y	0.901	162	0%	127	15.7%	23	26%	benign(0.037)	tolerated(0.06)	neutral(0.325)	superfamily_ARM repeat
HHLA1	10086	genome.wustl.edu	37	8	133076278	133076278	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145095.1	-1	provisional	p.K520	0.994	285	0%	203	71.9%	0	-	-	-	-	NULL
HHLA1	10086	genome.wustl.edu	37	8	133099954	133099954	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145095.1	-1	provisional	p.E208*	0.982	284	0%	208	23.6%	0	-	-	-	-	NULL
KCNQ3	3786	genome.wustl.edu	37	8	133141657	133141657	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004519.2	-1	reviewed	p.S824L	0.455	26	0%	39	64.1%	2	50%	benign(0.418)	tolerated(0.07)	neutral(0.455)	NULL
KCNQ3	3786	genome.wustl.edu	37	8	133150208	133150208	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004519.2	-1	reviewed	p.D542N	0.998	75	0%	78	28.2%	0	-	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMPfam_KCNQ_channel
KCNQ3	3786	genome.wustl.edu	37	8	133182625	133182625	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004519.2	-1	reviewed	p.A397	0.288	62	0%	60	66.7%	1	0%	-	-	-	NULL
PHF20L1	51105	genome.wustl.edu	37	8	133811053	133811053	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016018.4	+1	validated	p.R126C	1.000	314	0%	134	73.9%	17	64.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00333,HMMSmart_SM00743,superfamily_Tudor/PWWP/MBT
PHF20L1	51105	genome.wustl.edu	37	8	133856452	133856452	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016018.4	+1	validated	p.E934K	0.915	236	0%	108	23.1%	12	8.3%	benign(0.001)	tolerated(0.19)	neutral(0.050)	NULL
TG	7038	genome.wustl.edu	37	8	133923701	133923701	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003235.4	+1	reviewed	p.R1361H	0.388	239	0%	281	25.3%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
TG	7038	genome.wustl.edu	37	8	133941365	133941365	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003235.4	+1	reviewed	p.D1582N	0.001	248	0%	224	65.2%	0	-	benign(0.001)	tolerated(0.12)	neutral(0.261)	NULL
TG	7038	genome.wustl.edu	37	8	133980182	133980182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003235.4	+1	reviewed	p.P1944S	0.999	48	0%	30	36.7%	0	-	possibly_damaging(0.916)	deleterious(0)	deleterious(0.811)	NULL
SLA	6503	genome.wustl.edu	37	8	134072522	134072522	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006748.3	-1	validated	p.L2F	0.917	80	0%	102	38.2%	0	-	benign(0)	-	-	NULL
NDRG1	10397	genome.wustl.edu	37	8	134292492	134292492	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135242.1	-1	reviewed	p.Q28*	0.991	168	0%	170	43.5%	561	37.7%	-	-	-	superfamily_alpha/beta-Hydrolases
ST3GAL1	6482	genome.wustl.edu	37	8	134474202	134474202	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003033.3	-1	reviewed	p.V255	1.000	34	0%	78	69.2%	12	50%	-	-	-	HMMPfam_Glyco_transf_29
ZFAT	57623	genome.wustl.edu	37	8	135649719	135649719	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020863.3	-1	reviewed	p.E145*	1.000	73	0%	103	15.5%	2	0%	-	-	-	NULL
FAM135B	51059	genome.wustl.edu	37	8	139165159	139165159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015912.3	-1	validated	p.T520I	0.209	112	0%	99	22.2%	0	-	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	NULL
COL22A1	169044	genome.wustl.edu	37	8	139611051	139611051	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152888.1	-1	validated	p.G1426C	1.000	32	0%	53	20.8%	0	-	unknown(0)	deleterious(0)	-	HMMPfam_Collagen
COL22A1	169044	genome.wustl.edu	37	8	139703091	139703091	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000341807	-1	known	p.R176W	0.005	37	0%	45	24.4%	0	-	-	-	-	HMMPfam_Collagen
KCNK9	51305	genome.wustl.edu	37	8	140630718	140630718	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016601.2	-1	reviewed	p.R303H	0.616	26	0%	52	15.4%	0	-	benign(0.028)	tolerated(0.11)	neutral(0.273)	NULL
KCNK9	51305	genome.wustl.edu	37	8	140631031	140631031	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016601.2	-1	reviewed	p.T199A	1.000	10	0%	23	34.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans_2,superfamily_SSF81324
KCNK9	51305	genome.wustl.edu	37	8	140715117	140715117	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016601.2	-1	reviewed	p.K40T	1.000	49	0%	85	29.4%	0	-	benign(0.025)	tolerated(0.59)	neutral(0.005)	superfamily_SSF81324
CHRAC1	54108	genome.wustl.edu	37	8	141525425	141525425	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_023360.1	+1	validated	NULL	0.000	125	0%	127	16.5%	50	26%	-	-	-	-
EIF2C2	27161	genome.wustl.edu	37	8	141542610	141542610	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012154.3	-1	reviewed	p.A785V	1.000	18	0%	25	16%	40	32.5%	-	-	-	NULL
EIF2C2	27161	genome.wustl.edu	37	8	141566019	141566019	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012154.3	-1	reviewed	p.R408H	0.029	28	0%	39	15.4%	15	6.6%	-	-	-	NULL
EIF2C2	27161	genome.wustl.edu	37	8	141566057	141566057	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000220592	-1	known	p.D403N	1.000	58	0%	72	40.3%	12	41.6%	benign(0)	tolerated(1)	-	NULL
EIF2C2	27161	genome.wustl.edu	37	8	141570579	141570579	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012154.3	-1	reviewed	p.P176Q	0.098	14	0%	31	22.6%	17	23.5%	-	-	-	NULL
PTK2	5747	genome.wustl.edu	37	8	141675076	141675076	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005607.3	-1	reviewed	p.R984S	1.000	52	0%	65	13.8%	77	5.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Focal_AT,superfamily_Focal_AT
PTK2	5747	genome.wustl.edu	37	8	141753327	141753327	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005607.3	-1	reviewed	e19+2	1.000	412	0%	317	10.4%	0	-	-	-	-	-
PTK2	5747	genome.wustl.edu	37	8	141756951	141756951	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005607.3	-1	reviewed	p.R498C	1.000	96	0%	77	81.8%	26	38.4%	benign(0.073)	deleterious(0)	neutral(0.450)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
PTK2	5747	genome.wustl.edu	37	8	141762395	141762395	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005607.3	-1	reviewed	p.V473	0.989	185	0%	133	45.9%	33	33.3%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP
DENND3	22898	genome.wustl.edu	37	8	142188292	142188292	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014957.2	+1	validated	p.E865K	0.997	55	1.8%	59	15.3%	7	0%	benign(0.353)	tolerated(0.1)	neutral(0.398)	NULL
DENND3	22898	genome.wustl.edu	37	8	142195279	142195279	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014957.2	+1	validated	p.K916E	1.000	72	0%	116	27.6%	7	14.2%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	superfamily_WD40 repeat-like
DENND3	22898	genome.wustl.edu	37	8	142195341	142195341	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014957.2	+1	validated	p.I936	0.079	66	0%	113	46%	6	16.6%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
SLC45A4	57210	genome.wustl.edu	37	8	142221795	142221795	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080431.1	-1	provisional	p.R715C	0.002	12	0%	17	35.3%	8	12.5%	benign(0.021)	deleterious(0.02)	neutral(0.384)	NULL
SLC45A4	57210	genome.wustl.edu	37	8	142222392	142222392	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080431.1	-1	provisional	p.A684	0.000	12	0%	23	43.5%	20	45%	-	-	-	NULL
SLC45A4	57210	genome.wustl.edu	37	8	142228458	142228458	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080431.1	-1	provisional	p.F376	1.000	6	0.000	11	0.364	24	20.8%	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SLC45A4	57210	genome.wustl.edu	37	8	142229885	142229885	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080431.1	-1	provisional	p.I107	0.994	6	0.000	15	0.333	16	25%	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
FLJ43860	389690	genome.wustl.edu	37	8	142487990	142487990	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207414.2	-1	validated	p.T417	0.413	18	0%	17	52.9%	0	-	-	-	-	NULL
TSNARE1	203062	genome.wustl.edu	37	8	143381961	143381961	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145003.3	-1	validated	p.V392	0.997	26	0%	28	21.4%	13	7.6%	-	-	-	superfamily_t-snare
TSNARE1	203062	genome.wustl.edu	37	8	143413121	143413121	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145003.3	-1	validated	p.S273T	0.799	36	0%	65	58.5%	14	35.7%	benign(0.094)	tolerated(0.21)	neutral(0.051)	superfamily_t-snare
TSNARE1	203062	genome.wustl.edu	37	8	143413182	143413182	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145003.3	-1	validated	p.V252	0.000	63	0%	80	16.3%	18	5.5%	-	-	-	superfamily_t-snare
TSNARE1	203062	genome.wustl.edu	37	8	143425607	143425607	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145003.3	-1	validated	p.A155	0.891	4	0.000	10	0.500	17	58.8%	-	-	-	NULL
BAI1	575	genome.wustl.edu	37	8	143566106	143566106	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001702.2	+1	reviewed	p.Y763*	1.000	18	0%	34	23.5%	2	0%	-	-	-	NULL
BAI1	575	genome.wustl.edu	37	8	143569735	143569735	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001702.2	+1	reviewed	p.I773	1.000	32	0%	35	40%	7	42.8%	-	-	-	NULL
BAI1	575	genome.wustl.edu	37	8	143599543	143599543	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001702.2	+1	reviewed	p.G954	1.000	44	0%	90	48.9%	8	25%	-	-	-	HMMPfam_7tm_2
ARC	23237	genome.wustl.edu	37	8	143694920	143694920	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015193.3	-1	validated	p.W238*	1.000	9	0.000	9	0.556	0	-	-	-	-	NULL
ENSG00000247396	0	genome.wustl.edu	37	8	143744185	143744185	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000501891	+1	known	NULL	0.000	49	0%	34	11.8%	4	0%	-	-	-	-
LYNX1	66004	genome.wustl.edu	37	8	143856699	143856699	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177457.3	-1	reviewed	p.H79	0.644	32	0%	40	12.5%	4	25%	-	-	-	HMMPfam_UPAR_LY6,HMMSmart_LU,superfamily_SSF57302
CYP11B2	1585	genome.wustl.edu	37	8	143994102	143994102	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000498.3	-1	reviewed	p.A414	0.000	18	0%	70	25.7%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP11B2	1585	genome.wustl.edu	37	8	143995718	143995718	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000498.3	-1	reviewed	p.A306T	1.000	85	0%	164	11%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_p450,superfamily_Cytochrome P450
GPIHBP1	338328	genome.wustl.edu	37	8	144295150	144295150	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178172.3	+1	validated	p.A3V	0.002	3	0.000	13	0.692	0	-	unknown(0)	deleterious(0)	-	NULL
TOP1MT	116447	genome.wustl.edu	37	8	144391625	144391625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052963.1	-1	reviewed	p.D598Y	0.960	60	0%	72	61.1%	48	64.5%	probably_damaging(0.966)	deleterious(0)	deleterious(0.853)	superfamily_DNA_brk_join_enz
TOP1MT	116447	genome.wustl.edu	37	8	144403523	144403523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052963.1	-1	reviewed	p.G332S	0.998	20	0%	43	34.9%	46	19.5%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	superfamily_DNA_brk_join_enz,HMMSmart_TOPEUc,HMMPfam_Topoisom_I
TOP1MT	116447	genome.wustl.edu	37	8	144406269	144406269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052963.1	-1	reviewed	p.R287Q	0.007	40	0%	60	35%	42	21.4%	benign(0.008)	deleterious(0.01)	neutral(0.406)	superfamily_DNA_brk_join_enz,HMMSmart_TOPEUc,HMMPfam_Topoisom_I
RHPN1	114822	genome.wustl.edu	37	8	144458724	144458724	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052924.2	+1	validated	p.T69M	1.000	6	0.000	21	0.238	45	20%	possibly_damaging(0.921)	deleterious(0.05)	deleterious(0.716)	HMMPfam_HR1,HMMSmart_Hr1,superfamily_PKN_effector
ZC3H3	23144	genome.wustl.edu	37	8	144621410	144621410	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015117.2	-1	validated	p.T43P	0.000	8	0.000	17	0.765	24	66.6%	benign(0.321)	tolerated(0.09)	neutral(0.397)	NULL
C8orf73	642475	genome.wustl.edu	37	8	144650348	144650348	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100878.1	-1	validated	p.D576	1.000	12	0%	32	37.5%	19	15.7%	-	-	-	superfamily_ARM-type_fold
NAPRT1	93100	genome.wustl.edu	37	8	144657046	144657046	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145201.4	-1	validated	p.A527S	0.045	11	0%	21	23.8%	259	23.9%	benign(0.003)	tolerated(0.44)	neutral(0.013)	NULL
EEF1D	1936	genome.wustl.edu	37	8	144662334	144662334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130053.1	-1	reviewed	p.R585C	1.000	34	0%	49	20.4%	900	18.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EF1_GNE,superfamily_eEF-1beta-like
EEF1D	1936	genome.wustl.edu	37	8	144671720	144671720	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130053.1	-1	reviewed	p.V178M	0.929	6	0.000	13	0.462	51	43.1%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
PYCRL	65263	genome.wustl.edu	37	8	144689240	144689240	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023078.2	-1	validated	p.I85	1.000	13	0%	23	39.1%	32	53.1%	-	-	-	HMMPfam_F420_oxidored,superfamily_NAD(P)-binding Rossmann-fold domains
TSTA3	7264	genome.wustl.edu	37	8	144696876	144696876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000433984	-1	known	p.H157Q	0.000	22	0%	70	21.4%	8	12.5%	-	-	-	NULL
ZNF623	9831	genome.wustl.edu	37	8	144732637	144732637	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014789.3	+1	validated	p.R199C	0.927	55	0%	74	14.9%	25	20%	possibly_damaging(0.482)	deleterious(0)	deleterious(0.605)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
MAPK15	225689	genome.wustl.edu	37	8	144803454	144803454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139021.2	+1	validated	p.E359D	0.019	14	7.1%	21	47.6%	33	51.5%	benign(0.031)	tolerated(0.49)	neutral(0.012)	NULL
SCRIB	23513	genome.wustl.edu	37	8	144894502	144894502	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182706.3	-1	validated	p.E280D	1.000	36	0%	52	23.1%	108	25.9%	possibly_damaging(0.45)	tolerated(0.43)	neutral(0.161)	HMMSmart_SM00364,superfamily_RNI-like
NRBP2	340371	genome.wustl.edu	37	8	144921064	144921064	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178564.3	-1	validated	p.C2	1.000	15	0%	37	43.2%	28	50%	-	-	-	NULL
EPPK1	83481	genome.wustl.edu	37	8	144941104	144941104	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031308.1	-1	validated	p.E2106	0.001	46	0%	96	11.5%	6	33.3%	-	-	-	NULL
PLEC	5339	genome.wustl.edu	37	8	144991438	144991438	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201380.2	-1	reviewed	p.S4321F	1.000	6	0.000	22	0.364	231	19.9%	probably_damaging(0.999)	-	-	HMMSmart_SM00250,superfamily_Plakin repeat
PLEC	5339	genome.wustl.edu	37	8	144991961	144991961	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201380.2	-1	reviewed	p.A4147T	1.000	15	0%	26	34.6%	180	24.4%	probably_damaging(1)	-	-	HMMSmart_SM00250,superfamily_Plakin repeat
PLEC	5339	genome.wustl.edu	37	8	144994739	144994739	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201380.2	-1	reviewed	p.A3221P	0.000	3	0.000	8	0.500	81	49.3%	probably_damaging(0.997)	-	-	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat
PLEC	5339	genome.wustl.edu	37	8	144995292	144995292	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201380.2	-1	reviewed	p.S3036	0.000	33	0%	58	32.8%	92	48.9%	-	-	-	NULL
PLEC	5339	genome.wustl.edu	37	8	144995381	144995381	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201380.2	-1	reviewed	p.R3007C	1.000	43	0%	46	17.4%	71	22.5%	probably_damaging(1)	-	-	HMMSmart_SM00250,superfamily_Plakin repeat
PARP10	84875	genome.wustl.edu	37	8	145051798	145051798	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032789.3	-1	validated	p.A978T	0.992	5	0.000	15	0.800	118	64.4%	benign(0.047)	tolerated(0.09)	neutral(0.299)	HMMPfam_PARP,superfamily_SSF56399
PARP10	84875	genome.wustl.edu	37	8	145058756	145058756	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032789.3	-1	validated	p.V472I	0.470	21	0%	46	15.2%	77	14.2%	benign(0.017)	deleterious(0)	neutral(0.445)	NULL
MAF1	84232	genome.wustl.edu	37	8	145161332	145161332	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032272.4	+1	reviewed	p.D155	0.727	36	0%	92	40.2%	386	46.1%	-	-	-	HMMPfam_Maf1
HSF1	3297	genome.wustl.edu	37	8	145535226	145535226	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005526.2	+1	reviewed	p.S221Y	0.962	9	0.000	28	0.821	227	69.6%	possibly_damaging(0.743)	deleterious(0.01)	deleterious(0.678)	NULL
DGAT1	8694	genome.wustl.edu	37	8	145540294	145540294	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012079.4	-1	validated	p.G464R	1.000	17	0%	19	47.4%	188	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MBOAT
FBXL6	26233	genome.wustl.edu	37	8	145579713	145579713	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012162.1	-1	reviewed	p.A463T	1.000	18	0%	24	20.8%	147	23.1%	benign(0.422)	deleterious(0.02)	deleterious(0.520)	superfamily_RNI-like
FBXL6	26233	genome.wustl.edu	37	8	145580740	145580740	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012162.1	-1	reviewed	p.L227	0.910	17	0%	20	25%	116	18.1%	-	-	-	HMMSmart_SM00367,superfamily_RNI-like
SLC52A2	79581	genome.wustl.edu	37	8	145583536	145583536	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024531.3	+1	validated	p.S128	0.993	36	0%	57	28.1%	212	16.9%	-	-	-	NULL
SLC52A2	79581	genome.wustl.edu	37	8	145583655	145583655	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024531.3	+1	validated	p.G168D	1.000	9	0.000	36	0.278	197	27.9%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
CPSF1	29894	genome.wustl.edu	37	8	145619224	145619224	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013291.2	-1	validated	p.L1297	0.995	19	0%	76	21.1%	170	19.4%	-	-	-	HMMPfam_CPSF_A
MIR939	100126351	genome.wustl.edu	37	8	145619404	145619404	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000401314	-1	known	NULL	0.000	11	0%	27	25.9%	11	18.1%	-	-	-	-
CPSF1	29894	genome.wustl.edu	37	8	145621589	145621589	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013291.2	-1	validated	p.R985C	0.991	3	0.000	20	0.400	122	50%	possibly_damaging(0.795)	deleterious(0.03)	deleterious(0.663)	NULL
CPSF1	29894	genome.wustl.edu	37	8	145621890	145621890	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013291.2	-1	validated	p.G917S	0.001	56	0%	117	31.6%	85	18.8%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
CPSF1	29894	genome.wustl.edu	37	8	145625831	145625831	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013291.2	-1	validated	p.T248M	0.988	15	0%	37	40.5%	135	43.7%	benign(0.001)	tolerated(0.11)	neutral(0.272)	NULL
VPS28	51160	genome.wustl.edu	37	8	145650192	145650192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183057.1	-1	reviewed	p.P104L	1.000	34	0%	55	23.6%	540	18.8%	probably_damaging(0.974)	deleterious(0.03)	deleterious(0.780)	HMMPfam_VPS28
RECQL4	9401	genome.wustl.edu	37	8	145737380	145737380	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000428558	-1	known	p.L1103M	0.807	13	0%	26	30.8%	156	25.6%	-	-	-	NULL
RECQL4	9401	genome.wustl.edu	37	8	145738802	145738802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000428558	-1	known	p.R755W	1.000	4	0.000	11	0.727	40	50%	-	-	-	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZNF7	7553	genome.wustl.edu	37	8	146066787	146066787	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003416.2	+1	validated	p.I99V	0.000	84	0%	85	24.7%	22	9%	benign(0)	tolerated(0.34)	neutral(0.023)	NULL
ZNF16	7564	genome.wustl.edu	37	8	146157691	146157691	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029976.2	-1	reviewed	p.R161H	0.016	43	0%	64	23.4%	3	33.3%	benign(0.174)	tolerated(0.14)	neutral(0.266)	superfamily_C2H2 and C2HC zinc fingers
CBWD1	55871	genome.wustl.edu	37	9	172148	172148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018491.3	-1	validated	p.E121D	1.000	1435	0.1%	850	36.1%	37	45.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_cobW,superfamily_P-loop containing nucleoside triphosphate hydrolases
DOCK8	81704	genome.wustl.edu	37	9	286621	286621	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203447.3	+1	reviewed	p.S38F	1.000	140	0%	63	47.6%	3	33.3%	possibly_damaging(0.459)	tolerated(0.21)	neutral(0.195)	NULL
KANK1	23189	genome.wustl.edu	37	9	711732	711732	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015158.2	+1	reviewed	p.R322	0.893	29	0%	22	36.4%	26	61.5%	-	-	-	superfamily_ANK
DMRT3	58524	genome.wustl.edu	37	9	990068	990068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021240.2	+1	validated	p.G161D	0.001	23	0%	27	33.3%	0	-	benign(0.025)	tolerated(0.28)	neutral(0.033)	NULL
DMRT2	10655	genome.wustl.edu	37	9	1057239	1057239	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181872.4	+1	reviewed	p.R551M	1.000	66	0%	42	11.9%	0	-	possibly_damaging(0.928)	tolerated(0.07)	deleterious(0.695)	NULL
SMARCA2	6595	genome.wustl.edu	37	9	2096700	2096700	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003070.3	+1	reviewed	p.I976S	1.000	149	0%	87	34.5%	27	33.3%	benign(0.119)	deleterious(0.05)	neutral(0.355)	HMMPfam_SNF2_N
SMARCA2	6595	genome.wustl.edu	37	9	2110410	2110410	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003070.3	+1	reviewed	p.P1150H	1.000	49	0%	39	43.6%	46	41.3%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
GLIS3	169792	genome.wustl.edu	37	9	3828386	3828386	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042413.1	-1	reviewed	p.S893	0.998	29	0%	19	31.6%	2	0%	-	-	-	NULL
GLIS3	169792	genome.wustl.edu	37	9	3898785	3898785	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042413.1	-1	reviewed	p.T678	0.028	24	4.2%	14	35.7%	11	45.4%	-	-	-	NULL
CDC37L1	55664	genome.wustl.edu	37	9	4697833	4697833	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017913.2	+1	validated	p.N234S	1.000	434	0%	210	47.6%	22	36.3%	possibly_damaging(0.775)	tolerated(0.13)	deleterious(0.541)	HMMPfam_CDC37_M,superfamily_SSF101391
RCL1	10171	genome.wustl.edu	37	9	4826920	4826920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005772.3	+1	validated	p.V91I	0.149	363	0%	184	44.6%	9	44.4%	benign(0)	tolerated(0.41)	neutral(0.015)	HMMPfam_RTC,superfamily_RNA3apos_cycl/enolpyr_transf_A/B
JAK2	3717	genome.wustl.edu	37	9	5055688	5055688	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004972.3	+1	reviewed	p.D319G	1.000	352	0%	115	42.6%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
JAK2	3717	genome.wustl.edu	37	9	5080307	5080307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004972.3	+1	reviewed	p.W737L	1.000	145	0%	66	37.9%	6	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
INSL6	11172	genome.wustl.edu	37	9	5185363	5185363	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007179.2	-1	reviewed	p.F80	0.000	41	0%	28	50%	0	-	-	-	-	HMMPfam_Insulin,HMMSmart_IlGF,superfamily_Insulin-like
INSL6	11172	genome.wustl.edu	37	9	5185504	5185504	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007179.2	-1	reviewed	p.C33	1.000	19	0%	23	52.2%	0	-	-	-	-	HMMPfam_Insulin,HMMSmart_IlGF,superfamily_Insulin-like
C9orf46	55848	genome.wustl.edu	37	9	5361185	5361185	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018465.2	-1	provisional	p.A72V	0.999	207	0%	58	39.7%	32	46.8%	probably_damaging(0.977)	tolerated(0.38)	neutral(0.436)	HMMPfam_DUF2368
KIAA1432	57589	genome.wustl.edu	37	9	5747338	5747338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020829.2	+1	validated	p.R350C	1.000	197	0%	82	41.5%	13	38.4%	possibly_damaging(0.44)	tolerated(0.1)	neutral(0.430)	superfamily_Amine_DH_B_like
KIAA2026	158358	genome.wustl.edu	37	9	5922777	5922777	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017969.2	-1	validated	p.W1073*	1.000	203	0%	83	42.2%	2	50%	-	-	-	NULL
KIAA2026	158358	genome.wustl.edu	37	9	5969167	5969167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017969.2	-1	validated	p.R355K	1.000	145	0%	71	14.1%	9	33.3%	possibly_damaging(0.672)	tolerated(0.15)	deleterious(0.479)	NULL
RANBP6	26953	genome.wustl.edu	37	9	6012772	6012772	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012416.2	-1	validated	p.D946N	1.000	244	0%	136	47.1%	9	33.3%	benign(0.019)	tolerated(0.12)	neutral(0.262)	superfamily_ARM-type_fold
RANBP6	26953	genome.wustl.edu	37	9	6015092	6015092	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012416.2	-1	validated	p.T172	1.000	75	0%	44	43.2%	8	62.5%	-	-	-	superfamily_ARM-type_fold
RANBP6	26953	genome.wustl.edu	37	9	6015301	6015301	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012416.2	-1	validated	p.L103	0.997	97	0%	71	40.8%	10	40%	-	-	-	superfamily_ARM-type_fold
IL33	90865	genome.wustl.edu	37	9	6251223	6251223	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033439.2	+1	validated	p.V101L	0.000	246	0%	116	36.2%	1	0%	benign(0.053)	tolerated(0.4)	neutral(0.019)	NULL
GLDC	2731	genome.wustl.edu	37	9	6602146	6602146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000170.2	-1	reviewed	p.R373Q	1.000	174	0%	102	29.4%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_PyrdxlP-dep_Trfase_major,HMMPfam_GDC-P
LOC100287684	100287684	genome.wustl.edu	37	9	6835375	6835375	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342904.1	-1	model	p.N62	0.997	37	0%	36	33.3%	0	-	-	-	-	NULL
KDM4C	23081	genome.wustl.edu	37	9	6984186	6984186	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015061.3	+1	reviewed	p.T379I	0.180	25	0%	22	50%	14	28.5%	benign(0.006)	tolerated(0.19)	neutral(0.050)	NULL
KDM4C	23081	genome.wustl.edu	37	9	7013956	7013956	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015061.3	+1	reviewed	p.S713R	0.998	260	0%	83	49.4%	11	72.7%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger
PTPRD	5789	genome.wustl.edu	37	9	8319963	8319963	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002839.3	-1	reviewed	p.A1846	1.000	137	0%	40	42.5%	3	0%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRD	5789	genome.wustl.edu	37	9	8460516	8460516	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002839.3	-1	reviewed	p.P1257L	1.000	167	0%	44	43.2%	0	-	benign(0.334)	deleterious(0.01)	deleterious(0.511)	NULL
PTPRD	5789	genome.wustl.edu	37	9	8485948	8485948	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002839.3	-1	reviewed	p.L957I	0.984	185	0%	99	43.4%	1	0%	benign(0.013)	tolerated(0.31)	neutral(0.028)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
PTPRD	5789	genome.wustl.edu	37	9	8517874	8517874	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002839.3	-1	reviewed	p.D506G	1.000	160	0%	93	49.5%	3	66.6%	benign(0.019)	tolerated(0.27)	neutral(0.035)	superfamily_Fibronectin type III
PTPRD	5789	genome.wustl.edu	37	9	8521540	8521540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002839.3	-1	reviewed	p.R233H	1.000	53	0%	21	52.4%	2	100%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
LURAP1L	286343	genome.wustl.edu	37	9	12775990	12775990	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203403.1	+1	validated	p.R92	1.000	16	0%	12	83.3%	4	0%	-	-	-	NULL
MPDZ	8777	genome.wustl.edu	37	9	13121892	13121892	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003829.3	-1	validated	p.A1693T	1.000	164	0%	118	47.5%	8	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
MPDZ	8777	genome.wustl.edu	37	9	13123200	13123200	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003829.3	-1	validated	p.G1635	0.979	36	0%	27	44.4%	8	62.5%	-	-	-	HMMPfam_PDZ,superfamily_PDZ domain-like
MPDZ	8777	genome.wustl.edu	37	9	13158020	13158020	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003829.3	-1	validated	p.R1150M	1.000	327	0%	97	33%	9	44.4%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	superfamily_PDZ domain-like
NFIB	4781	genome.wustl.edu	37	9	14155846	14155846	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005596.2	-1	validated	p.S221	1.000	249	0%	34	35.3%	62	50%	-	-	-	HMMPfam_CTF_NFI
ZDHHC21	340481	genome.wustl.edu	37	9	14619032	14619032	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178566.4	-1	validated	p.L244M	1.000	54	0%	29	44.8%	7	42.8%	possibly_damaging(0.949)	tolerated(0.06)	deleterious(0.716)	NULL
FREM1	158326	genome.wustl.edu	37	9	14740203	14740203	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144966.5	-1	reviewed	p.S2095F	0.641	81	0%	32	53.1%	34	44.1%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
FREM1	158326	genome.wustl.edu	37	9	14784540	14784540	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144966.5	-1	reviewed	p.D1424Y	1.000	120	0%	61	32.8%	14	57.1%	probably_damaging(0.976)	tolerated(0.09)	deleterious(0.714)	NULL
FREM1	158326	genome.wustl.edu	37	9	14859343	14859343	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144966.5	-1	reviewed	p.N157H	1.000	74	0%	52	42.3%	3	33.3%	possibly_damaging(0.611)	tolerated(0.12)	deleterious(0.472)	NULL
PSIP1	11168	genome.wustl.edu	37	9	15466784	15466784	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128217.1	-1	validated	p.E498D	0.995	671	0%	327	45.3%	60	51.6%	benign(0.388)	tolerated(0.16)	neutral(0.183)	NULL
C9orf93	203238	genome.wustl.edu	37	9	15721784	15721784	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173550.2	+1	predicted	p.D446Y	1.000	151	0%	44	40.9%	3	33.3%	possibly_damaging(0.933)	deleterious(0.01)	deleterious(0.784)	NULL
C9orf93	203238	genome.wustl.edu	37	9	15745621	15745621	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173550.2	+1	predicted	p.G888D	0.992	283	0%	93	32.3%	2	50%	benign(0.001)	tolerated(0.16)	neutral(0.059)	NULL
C9orf93	203238	genome.wustl.edu	37	9	15777691	15777691	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173550.2	+1	predicted	p.C922Y	0.007	136	0%	81	44.4%	1	0%	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
C9orf93	203238	genome.wustl.edu	37	9	15920350	15920350	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173550.2	+1	predicted	p.R1228Q	1.000	182	0%	34	52.9%	5	40%	benign(0.142)	deleterious(0.02)	neutral(0.395)	NULL
BNC2	54796	genome.wustl.edu	37	9	16419445	16419445	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017637.5	-1	validated	p.G948R	1.000	41	0%	36	30.6%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
CNTLN	54875	genome.wustl.edu	37	9	17330716	17330716	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017738.2	+1	validated	p.K476N	1.000	189	0%	79	39.2%	1	100%	probably_damaging(0.999)	tolerated(0.15)	deleterious(0.732)	NULL
CNTLN	54875	genome.wustl.edu	37	9	17340946	17340946	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017738.2	+1	validated	p.M589T	0.999	168	0%	51	58.8%	5	0%	benign(0.062)	tolerated(0.89)	neutral(0.004)	NULL
CNTLN	54875	genome.wustl.edu	37	9	17395048	17395048	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017738.2	+1	validated	p.E866K	1.000	62	0%	34	41.2%	1	100%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	NULL
SH3GL2	6456	genome.wustl.edu	37	9	17795629	17795629	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003026.2	+1	validated	p.I316T	1.000	174	0%	63	36.5%	2	0%	possibly_damaging(0.732)	deleterious(0.04)	deleterious(0.617)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
ADAMTSL1	92949	genome.wustl.edu	37	9	18826350	18826350	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040272.4	+1	validated	p.E1335K	0.994	29	0%	18	44.4%	2	50%	benign(0.059)	tolerated(0.61)	neutral(0.008)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
ADAMTSL1	92949	genome.wustl.edu	37	9	18887852	18887852	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040272.4	+1	validated	p.V1425L	0.023	43	0%	33	48.5%	5	0%	benign(0.009)	tolerated(0.3)	neutral(0.029)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HAUS6	54801	genome.wustl.edu	37	9	19058868	19058868	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017645.3	-1	provisional	p.E633*	0.077	363	0%	140	47.9%	9	66.6%	-	-	-	NULL
HAUS6	54801	genome.wustl.edu	37	9	19058902	19058902	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017645.3	-1	provisional	p.L621	0.927	398	0%	146	11.6%	9	0%	-	-	-	NULL
PLIN2	123	genome.wustl.edu	37	9	19121074	19121074	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122.2	-1	reviewed	p.T133	0.001	73	0%	63	41.3%	36	16.6%	-	-	-	HMMPfam_Perilipin
DENND4C	55667	genome.wustl.edu	37	9	19300318	19300318	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017925.4	+1	provisional	p.A198S	1.000	272	0%	132	40.9%	3	0%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_DENN,HMMSmart_SM00799
DENND4C	55667	genome.wustl.edu	37	9	19346106	19346106	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017925.4	+1	provisional	p.S828	0.963	268	0.4%	110	51.8%	5	40%	-	-	-	NULL
ACER2	340485	genome.wustl.edu	37	9	19423912	19423912	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010887.2	+1	validated	p.R54H	1.000	525	0.2%	277	45.1%	1	0%	probably_damaging(1)	tolerated(0.41)	deleterious(0.515)	HMMPfam_aPHC
ACER2	340485	genome.wustl.edu	37	9	19446241	19446241	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380376	+1	known	p.K139T	0.000	42	0%	34	47.1%	0	-	unknown(0)	-	-	HMMPfam_aPHC
SLC24A2	25769	genome.wustl.edu	37	9	19516325	19516325	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020344.1	-1	provisional	p.F604L	1.000	52	0%	26	50%	0	-	benign(0.338)	tolerated(0.72)	neutral(0.108)	HMMPfam_Na_Ca_ex
SLC24A2	25769	genome.wustl.edu	37	9	19597244	19597244	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020344.1	-1	provisional	p.D371G	1.000	736	0%	186	40.3%	0	-	benign(0.158)	tolerated(0.38)	neutral(0.032)	NULL
MLLT3	4300	genome.wustl.edu	37	9	20413791	20413791	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004529.2	-1	validated	p.T351	0.000	311	0%	159	43.4%	19	57.8%	-	-	-	NULL
KIAA1797	54914	genome.wustl.edu	37	9	20982430	20982430	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017794.3	+1	validated	p.I1571	0.094	203	0%	86	53.5%	24	50%	-	-	-	NULL
IFNB1	3456	genome.wustl.edu	37	9	21077444	21077444	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002176.2	-1	validated	p.H142P	0.000	289	0.3%	71	47.9%	0	-	benign(0.004)	tolerated(0.21)	neutral(0.044)	HMMPfam_Interferon,HMMSmart_SM00076,superfamily_4-helical cytokines
IFNA4	3441	genome.wustl.edu	37	9	21186982	21186982	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021068.2	-1	validated	p.K183N	0.000	554	0%	187	38.5%	0	-	benign(0.002)	tolerated(0.06)	neutral(0.323)	HMMPfam_Interferon,superfamily_4_helix_cytokine
IFNA17	3451	genome.wustl.edu	37	9	21228153	21228153	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021268.2	-1	validated	p.L7*	0.002	106	0%	67	44.8%	0	-	-	-	-	HMMPfam_Interferon
IFNA14	3448	genome.wustl.edu	37	9	21239676	21239676	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002172.2	-1	validated	p.T87A	0.239	171	0%	82	37.8%	0	-	possibly_damaging(0.74)	tolerated(0.06)	deleterious(0.594)	HMMPfam_Interferon,HMMSmart_IFabd,superfamily_4_helix_cytokine
KLHL9	55958	genome.wustl.edu	37	9	21334591	21334591	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018847.2	-1	validated	p.L90	0.499	98	0%	57	33.3%	14	35.7%	-	-	-	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
IFNA8	3445	genome.wustl.edu	37	9	21409312	21409312	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002170.3	+1	validated	p.R46I	0.601	127	0%	55	50.9%	0	-	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	HMMPfam_Interferon,superfamily_4-helical cytokines
TEK	7010	genome.wustl.edu	37	9	27190581	27190581	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000459.3	+1	reviewed	p.A461V	1.000	240	0%	66	43.9%	0	-	benign(0)	tolerated(0.36)	neutral(0.020)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
TEK	7010	genome.wustl.edu	37	9	27228245	27228245	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000459.3	+1	reviewed	p.E1081A	1.000	218	0%	72	48.6%	2	0%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
MOB3B	79817	genome.wustl.edu	37	9	27359139	27359139	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024761.3	-1	reviewed	p.R172W	1.000	102	0%	69	42%	9	44.4%	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	HMMPfam_Mob1_phocein,superfamily_Mob1_phocein
IFNK	56832	genome.wustl.edu	37	9	27524410	27524410	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020124.2	+1	reviewed	p.L26I	0.000	201	0%	129	13.2%	0	-	benign(0.05)	tolerated(0.49)	neutral(0.014)	HMMPfam_Interferon
LINGO2	158038	genome.wustl.edu	37	9	27949484	27949484	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152570.1	-1	provisional	p.F396V	1.000	103	0%	47	44.7%	0	-	possibly_damaging(0.935)	tolerated(0.06)	deleterious(0.703)	HMMSmart_LRRCT,superfamily_SSF52058
ACO1	48	genome.wustl.edu	37	9	32448914	32448914	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002197.2	+1	reviewed	p.A797	0.002	51	0%	53	37.7%	38	34.2%	-	-	-	HMMPfam_Aconitase_C,superfamily_Aconitase
TOPORS	10210	genome.wustl.edu	37	9	32543323	32543323	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005802.3	-1	reviewed	p.E400D	0.004	74	0%	62	58.1%	10	40%	unknown(0)	tolerated(0.31)	-	NULL
B4GALT1	2683	genome.wustl.edu	37	9	33135281	33135281	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001497.3	-1	reviewed	p.R185H	1.000	33	0%	28	39.3%	121	37.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Galactosyl_T_2,superfamily_Nucleotide-diphospho-sugar transferases
CHMP5	51510	genome.wustl.edu	37	9	33271171	33271171	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016410.4	+1	validated	p.V113L	1.000	521	0%	219	41.6%	108	49%	benign(0)	tolerated(0.41)	neutral(0.015)	HMMPfam_Snf7
NFX1	4799	genome.wustl.edu	37	9	33318792	33318792	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002504.3	+1	reviewed	p.G551V	1.000	247	0%	142	44.4%	19	73.6%	benign(0.389)	tolerated(0.22)	neutral(0.167)	NULL
NFX1	4799	genome.wustl.edu	37	9	33364060	33364060	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002504.3	+1	reviewed	p.R976C	0.993	445	0%	201	38.3%	3	33.3%	probably_damaging(0.999)	tolerated(0.18)	deleterious(0.546)	NULL
AQP7	364	genome.wustl.edu	37	9	33385866	33385866	+	Splice_Site	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001170.1	-1	reviewed	e6-2	0.812	29	3.4%	35	20%	0	-	-	-	-	-
AQP7	364	genome.wustl.edu	37	9	33387084	33387084	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001170.1	-1	reviewed	p.G51S	1.000	47	0%	37	29.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_MIP,superfamily_MIP
AQP3	360	genome.wustl.edu	37	9	33442346	33442346	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004925.3	-1	reviewed	p.G221	0.874	16	0%	21	42.9%	30	30%	-	-	-	HMMPfam_MIP,superfamily_Aquaporin-like
ANKRD18B	441459	genome.wustl.edu	37	9	33524338	33524339	+	Frame_Shift_Ins	INS	-	-	ATCGCGGGTTTGGGGGTGG	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001718334.2	+1	model	p.V125fs	0.562:0.557	-	-	-	-	-	-	-	-	-	superfamily_Ankyrin repeat
TRBV25OR9-2	6960	genome.wustl.edu	37	9	33662375	33662375	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000438417	+1	known	p.G17	0.002	59	0%	28	57.1%	0	-	-	-	-	NULL
UBAP2	55833	genome.wustl.edu	37	9	33922583	33922583	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018449.2	-1	reviewed	p.Q1093	1.000	62	0%	47	38.3%	48	37.5%	-	-	-	NULL
UBAP1	51271	genome.wustl.edu	37	9	34241758	34241758	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016525.4	+1	reviewed	p.K245N	1.000	115	0%	59	35.6%	50	46%	probably_damaging(0.989)	tolerated(0.12)	deleterious(0.700)	NULL
NUDT2	318	genome.wustl.edu	37	9	34343136	34343136	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001161.3	+1	reviewed	p.G48*	1.000	71	0%	33	42.4%	35	11.4%	-	-	-	HMMPfam_NUDIX,superfamily_NUDIX_hydrolase,PatternScan_NUDIX
KIAA1161	57462	genome.wustl.edu	37	9	34370895	34370895	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000297625	-1	known	p.R649C	1.000	10	0.000	6	1.000	5	60%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_Glyco_hydro_31
DNAI1	27019	genome.wustl.edu	37	9	34491513	34491513	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012144.2	+1	reviewed	p.E214	0.995	264	0%	178	44.9%	0	-	-	-	-	superfamily_WD40_like
RPP25L	138716	genome.wustl.edu	37	9	34611209	34611209	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148178.1	-1	validated	p.R29W	1.000	20	0%	19	52.6%	37	43.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Alba,superfamily_SSF82704
IL11RA	3590	genome.wustl.edu	37	9	34660928	34660928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142784.1	+1	reviewed	p.R416H	0.807	61	0%	54	40.7%	4	50%	benign(0.389)	tolerated(0.12)	neutral(0.385)	NULL
ENSG00000232067	0	genome.wustl.edu	37	9	34835454	34835454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000455647	-1	known	p.A12D	0.000	53	0%	40	42.5%	0	-	probably_damaging(0.96)	deleterious(0.01)	deleterious(0.808)	NULL
FAM205B	389715	genome.wustl.edu	37	9	34835916	34835916	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000399773	-1	known	p.L127	0.000	31	0%	19	52.6%	0	-	-	-	-	NULL
KIAA1045	23349	genome.wustl.edu	37	9	34971304	34971304	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015297.1	+1	validated	p.V3	1.000	49	0%	41	41.5%	0	-	-	-	-	NULL
KIAA1045	23349	genome.wustl.edu	37	9	34976684	34976684	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015297.1	+1	validated	p.P266S	1.000	13	0%	11	72.7%	0	-	benign(0)	tolerated(0.62)	neutral(0.004)	NULL
KIAA1045	23349	genome.wustl.edu	37	9	34976704	34976704	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015297.1	+1	validated	p.E272D	1.000	13	0%	18	22.2%	0	-	probably_damaging(0.975)	tolerated(0.1)	deleterious(0.704)	NULL
DNAJB5	25822	genome.wustl.edu	37	9	34996375	34996375	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135005.1	+1	validated	p.D181N	1.000	29	0%	42	52.4%	6	16.6%	possibly_damaging(0.943)	tolerated(0.3)	neutral(0.416)	superfamily_Chaperone J-domain
DNAJB5	25822	genome.wustl.edu	37	9	34996383	34996383	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135005.1	+1	validated	p.F183L	1.000	32	0%	47	40.4%	4	25%	benign(0.17)	deleterious(0.05)	neutral(0.361)	superfamily_Chaperone J-domain
LOC730110	730110	genome.wustl.edu	37	9	35148772	35148772	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342891.1	-1	model	p.S137L	0.000	162	0%	95	61.1%	0	-	-	-	-	NULL
LOC730110	730110	genome.wustl.edu	37	9	35149104	35149104	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342891.1	-1	model	p.Q26H	0.820	452	0%	252	38.1%	0	-	-	-	-	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
UNC13B	10497	genome.wustl.edu	37	9	35376074	35376074	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006377.3	+1	reviewed	p.S473L	1.000	96	0%	66	45.5%	14	35.7%	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	superfamily_SSF57889
UNC13B	10497	genome.wustl.edu	37	9	35376078	35376078	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006377.3	+1	reviewed	p.C474	0.935	92	0%	62	45.2%	14	57.1%	-	-	-	superfamily_SSF57889
RUSC2	9853	genome.wustl.edu	37	9	35548019	35548019	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135999.1	+1	validated	p.R501C	1.000	11	0%	18	27.8%	9	44.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RUSC2	9853	genome.wustl.edu	37	9	35556320	35556320	+	Missense_Mutation	SNP	C	C	T	rs188737758	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135999.1	+1	validated	p.P953L	1.000	84	0%	68	55.9%	8	37.5%	possibly_damaging(0.613)	deleterious(0.01)	deleterious(0.618)	NULL
CA9	768	genome.wustl.edu	37	9	35679942	35679942	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001216.2	+1	reviewed	p.I386N	0.007	53	0%	44	50%	45	48.8%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
TLN1	7094	genome.wustl.edu	37	9	35699446	35699446	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006289.3	-1	reviewed	p.P2261S	1.000	103	0%	68	38.2%	184	33.1%	benign(0.013)	tolerated(0.51)	neutral(0.009)	NULL
TLN1	7094	genome.wustl.edu	37	9	35704061	35704061	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006289.3	-1	reviewed	p.A2053V	0.997	12	0%	22	50%	164	33.5%	benign(0.062)	tolerated(0.14)	neutral(0.254)	NULL
TLN1	7094	genome.wustl.edu	37	9	35714587	35714587	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006289.3	-1	reviewed	p.S990N	1.000	22	0%	22	40.9%	56	35.7%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	superfamily_SSF109885
GBA2	57704	genome.wustl.edu	37	9	35738355	35738355	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020944.2	-1	reviewed	p.L691M	0.999	53	0%	57	40.4%	51	47%	possibly_damaging(0.555)	deleterious(0)	deleterious(0.634)	HMMPfam_DUF608,superfamily_Six-hairpin glycosidases
GBA2	57704	genome.wustl.edu	37	9	35741812	35741812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020944.2	-1	reviewed	p.R215C	0.992	55	0%	40	47.5%	41	39%	benign(0.004)	deleterious(0.05)	neutral(0.345)	NULL
RGP1	9827	genome.wustl.edu	37	9	35751737	35751737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080496.1	+1	provisional	p.V290I	0.986	97	0%	59	44.1%	14	28.5%	benign(0.001)	tolerated(0.29)	neutral(0.029)	HMMPfam_Rgp1
NPR2	4882	genome.wustl.edu	37	9	35807052	35807052	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003995.3	+1	reviewed	p.T851N	1.000	63	0%	46	41.3%	0	-	benign(0.277)	tolerated(0.31)	neutral(0.056)	HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
CCIN	881	genome.wustl.edu	37	9	36170569	36170569	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005893.2	+1	reviewed	p.K357T	1.000	21	0%	30	20%	0	-	probably_damaging(0.995)	tolerated(0.15)	deleterious(0.699)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
GNE	10020	genome.wustl.edu	37	9	36233940	36233940	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128227.1	-1	reviewed	p.T351I	1.000	94	0%	52	48.1%	9	88.8%	possibly_damaging(0.718)	deleterious(0.04)	deleterious(0.609)	HMMPfam_Epimerase_2,superfamily_SSF53756
RNF38	152006	genome.wustl.edu	37	9	36342359	36342359	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022781.4	-1	reviewed	p.H483R	1.000	135	0%	67	38.8%	33	48.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box
MELK	9833	genome.wustl.edu	37	9	36594671	36594671	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014791.2	+1	provisional	p.R103H	1.000	183	0%	131	38.9%	8	50%	possibly_damaging(0.792)	deleterious(0)	deleterious(0.742)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
GRHPR	9380	genome.wustl.edu	37	9	37424944	37424944	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012203.1	+1	reviewed	p.H62	0.000	6	0.000	13	0.462	97	39.1%	-	-	-	HMMPfam_2-Hacid_dh,superfamily_Formate/glycerate dehydrogenase catalytic domain-like
GRHPR	9380	genome.wustl.edu	37	9	37430790	37430790	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377824	+1	known	p.S294L	0.000	6	0.000	9	0.556	1	0%	unknown(0)	deleterious(0)	-	NULL
FBXO10	26267	genome.wustl.edu	37	9	37537126	37537126	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012166.2	-1	validated	p.R467Q	1.000	13	0%	11	36.4%	2	0%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMSmart_PbH1,HMMSmart_CASH,superfamily_Pectin_lyas_like
FRMPD1	22844	genome.wustl.edu	37	9	37740134	37740134	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014907.2	+1	validated	p.E537K	0.928	10	0.000	7	0.857	0	-	possibly_damaging(0.946)	tolerated(0.08)	deleterious(0.690)	NULL
FRMPD1	22844	genome.wustl.edu	37	9	37745093	37745093	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014907.2	+1	validated	p.P1022S	0.194	32	0%	28	39.3%	0	-	possibly_damaging(0.647)	deleterious(0)	deleterious(0.671)	NULL
FRMPD1	22844	genome.wustl.edu	37	9	37745192	37745192	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014907.2	+1	validated	p.G1055*	0.001	41	0%	38	42.1%	0	-	-	-	-	NULL
FRMPD1	22844	genome.wustl.edu	37	9	37746003	37746003	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014907.2	+1	validated	p.V1325A	0.000	50	0%	56	44.6%	0	-	benign(0.001)	tolerated(0.67)	neutral(0.003)	NULL
FRMPD1	22844	genome.wustl.edu	37	9	37746533	37746533	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014907.2	+1	validated	p.G1502S	0.982	11	0%	14	64.3%	0	-	probably_damaging(0.999)	tolerated(0.55)	deleterious(0.497)	NULL
ALDH1B1	219	genome.wustl.edu	37	9	38396001	38396001	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000692.3	+1	reviewed	p.A86T	1.000	14	0%	21	33.3%	17	35.2%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	HMMPfam_Aldedh,superfamily_ALDH-like
CNTNAP3	79937	genome.wustl.edu	37	9	39178297	39178297	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033655.3	-1	reviewed	p.P200L	0.001	286	0%	78	44.9%	0	-	benign(0)	tolerated(0.39)	neutral(0.016)	superfamily_Concanavalin A-like lectins/glucanases
LOC642406	642406	genome.wustl.edu	37	9	40503140	40503140	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344253.1	-1	model	p.D269G	1.000	55	0%	25	32%	1	0%	-	-	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
LOC642406	642406	genome.wustl.edu	37	9	40610072	40610072	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344253.1	-1	model	p.G55S	0.955	61	0%	21	38.1%	0	-	-	-	-	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,superfamily_Galactose-binding domain-like
FAM75A6	389730	genome.wustl.edu	37	9	43625258	43625258	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145196.1	-1	predicted	p.G1143	0.000	1433	0%	949	30.2%	0	-	-	-	-	NULL
LOC642236	642236	genome.wustl.edu	37	9	68433512	68433512	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_041085.2	-1	model	NULL	1.000	653	0%	220	10.9%	0	-	-	-	-	-
ANKRD20A4	728747	genome.wustl.edu	37	9	69423672	69423672	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098805.1	+1	provisional	p.E656	0.526	637	0%	169	19.5%	0	-	-	-	-	NULL
CBWD3	445571	genome.wustl.edu	37	9	70913958	70913958	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201453.2	+1	validated	p.P344S	0.994	492	0%	232	21.6%	1	100%	benign(0)	tolerated(0.45)	neutral(0.012)	HMMPfam_CobW_C,superfamily_Cbl_biosynth_CobW-like_C
TJP2	9414	genome.wustl.edu	37	9	71840306	71840306	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004817.3	+1	reviewed	p.G347*	1.000	99	0%	48	52.1%	7	14.2%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
TJP2	9414	genome.wustl.edu	37	9	71853640	71853640	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004817.3	+1	reviewed	p.D764N	1.000	144	0%	65	33.8%	16	6.2%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
TJP2	9414	genome.wustl.edu	37	9	71855006	71855006	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004817.3	+1	reviewed	p.R837*	0.994	184	0%	82	35.4%	13	0%	-	-	-	HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
FAM189A2	9413	genome.wustl.edu	37	9	71992551	71992551	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127608.1	+1	validated	p.E129*	1.000	75	0%	55	43.6%	2	0%	-	-	-	NULL
FAM189A2	9413	genome.wustl.edu	37	9	71998636	71998636	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127608.1	+1	validated	p.P195	0.990	100	0%	76	50%	3	100%	-	-	-	NULL
FAM189A2	9413	genome.wustl.edu	37	9	71998675	71998675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127608.1	+1	validated	p.Q208H	1.000	81	0%	71	33.8%	5	0%	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	NULL
APBA1	320	genome.wustl.edu	37	9	72131670	72131670	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001163.3	-1	reviewed	p.H153N	1.000	7	0.000	7	0.714	5	40%	benign(0.176)	deleterious(0.01)	neutral(0.422)	NULL
MAMDC2	256691	genome.wustl.edu	37	9	72727941	72727941	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153267.4	+1	validated	p.G179D	1.000	209	0%	76	47.4%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_MAM,HMMSmart_SM00137
MAMDC2	256691	genome.wustl.edu	37	9	72785470	72785470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153267.4	+1	validated	p.R525Q	1.000	120	0%	40	32.5%	0	-	benign(0.389)	tolerated(0.55)	neutral(0.132)	HMMPfam_MAM,HMMSmart_SM00137
SMC5	23137	genome.wustl.edu	37	9	72893538	72893538	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015110.3	+1	validated	p.L225	0.595	276	0%	95	42.1%	4	25%	-	-	-	HMMPfam_SMC_N,superfamily_SSF52540
SMC5	23137	genome.wustl.edu	37	9	72929661	72929661	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015110.3	+1	validated	p.R528C	1.000	170	0%	50	42%	7	14.2%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_SMC_N,superfamily_SSF52540
SMC5	23137	genome.wustl.edu	37	9	72962049	72962049	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015110.3	+1	validated	p.A879D	1.000	234	0%	104	49%	8	37.5%	possibly_damaging(0.938)	deleterious(0.01)	deleterious(0.789)	HMMPfam_SMC_N,superfamily_SSF52540
TRPM3	80036	genome.wustl.edu	37	9	73151070	73151070	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000396280	-1	known	p.G1490*	1.000	115	0%	89	13.5%	0	-	benign(0)	tolerated(0.44)	neutral(0.013)	NULL
TRPM3	80036	genome.wustl.edu	37	9	73151501	73151501	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007471.2	-1	reviewed	p.R1498C	1.000	238	0%	174	35.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TRPM3	80036	genome.wustl.edu	37	9	73152164	73152164	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007471.2	-1	reviewed	p.E1277K	1.000	32	0%	18	38.9%	0	-	possibly_damaging(0.49)	tolerated(0.14)	neutral(0.412)	NULL
TRPM3	80036	genome.wustl.edu	37	9	73296482	73296482	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007471.2	-1	reviewed	p.R429W	1.000	326	0%	118	48.3%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
FAM108B1	51104	genome.wustl.edu	37	9	74489728	74489728	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016014.2	-1	validated	p.A90V	1.000	287	0%	96	37.5%	13	46.1%	possibly_damaging(0.933)	deleterious(0.03)	deleterious(0.744)	superfamily_SSF53474
C9orf57	138240	genome.wustl.edu	37	9	74674162	74674162	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128618.1	-1	validated	p.G51D	0.404	175	0%	80	47.5%	0	-	benign(0.043)	-	-	NULL
TRPM6	140803	genome.wustl.edu	37	9	77377567	77377567	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017662.4	-1	reviewed	p.K1340N	0.441	249	0%	92	45.7%	0	-	possibly_damaging(0.818)	deleterious(0.01)	deleterious(0.715)	NULL
TRPM6	140803	genome.wustl.edu	37	9	77431608	77431608	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017662.4	-1	reviewed	p.L429I	0.992	254	0%	90	25.6%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
C9orf95	54981	genome.wustl.edu	37	9	77676186	77676186	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_023352.1	-1	validated	NULL	0.007	40	0%	11	45.5%	16	37.5%	-	-	-	-
PRUNE2	158471	genome.wustl.edu	37	9	79267419	79267419	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015225.2	-1	validated	p.S2846Y	1.000	192	0%	79	41.8%	0	-	benign(0.009)	tolerated(0.06)	neutral(0.323)	NULL
PRUNE2	158471	genome.wustl.edu	37	9	79322132	79322132	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000426088	-1	known	p.F1008V	0.013	81	0%	42	42.9%	0	-	-	-	-	NULL
PRUNE2	158471	genome.wustl.edu	37	9	79322516	79322516	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000426088	-1	known	p.L880I	0.012	186	0%	97	50.5%	2	50%	-	-	-	NULL
PRUNE2	158471	genome.wustl.edu	37	9	79323036	79323036	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015225.2	-1	validated	p.S1385Y	0.021	99	0%	50	58%	1	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
PRUNE2	158471	genome.wustl.edu	37	9	79323313	79323313	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015225.2	-1	validated	p.L1293M	0.000	100	0%	47	44.7%	1	0%	possibly_damaging(0.7)	tolerated(0.16)	neutral(0.311)	NULL
PRUNE2	158471	genome.wustl.edu	37	9	79326192	79326192	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015225.2	-1	validated	p.Y333C	1.000	48	0%	18	44.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
VPS13A	23230	genome.wustl.edu	37	9	79820294	79820294	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033305.2	+1	reviewed	p.E85*	1.000	313	0.3%	112	42.9%	0	-	-	-	-	NULL
VPS13A	23230	genome.wustl.edu	37	9	79890495	79890495	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033305.2	+1	reviewed	p.R865Q	0.000	320	0.3%	125	44%	0	-	benign(0.014)	tolerated(0.36)	neutral(0.021)	NULL
VPS13A	23230	genome.wustl.edu	37	9	79897116	79897116	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033305.2	+1	reviewed	p.P1015L	0.989	260	0%	87	46%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
VPS13A	23230	genome.wustl.edu	37	9	79985833	79985833	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033305.2	+1	reviewed	p.V2979I	1.000	530	0%	203	14.8%	2	0%	probably_damaging(0.998)	tolerated(0.33)	deleterious(0.498)	NULL
CEP78	84131	genome.wustl.edu	37	9	80879182	80879182	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098802.1	+1	validated	p.E526D	1.000	307	0%	128	44.5%	14	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TLE1	7088	genome.wustl.edu	37	9	84199392	84199392	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005077.3	-1	provisional	p.R726W	1.000	108	0%	82	42.7%	166	48.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
TLE1	7088	genome.wustl.edu	37	9	84230986	84230986	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005077.3	-1	provisional	p.R277C	1.000	96	0%	62	45.2%	87	48.2%	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	NULL
FAM75D1	389763	genome.wustl.edu	37	9	84605913	84605913	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001670.2	+1	validated	p.P176	0.006	283	0%	206	42.2%	0	-	-	-	-	NULL
FAM75D1	389763	genome.wustl.edu	37	9	84607436	84607436	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001670.2	+1	validated	p.R684M	0.000	184	0%	102	43.1%	0	-	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	NULL
FAM75D1	389763	genome.wustl.edu	37	9	84607959	84607959	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001670.2	+1	validated	p.K858	0.000	253	0%	159	36.5%	0	-	-	-	-	NULL
FAM75D1	389763	genome.wustl.edu	37	9	84609982	84609982	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001670.2	+1	validated	p.R1533S	0.000	59	0%	31	16.1%	0	-	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	NULL
GKAP1	80318	genome.wustl.edu	37	9	86357505	86357505	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025211.3	-1	reviewed	p.K305N	1.000	297	0%	94	42.6%	12	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIF27	55582	genome.wustl.edu	37	9	86498773	86498773	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017576.1	-1	provisional	p.Q800H	1.000	425	0%	180	15%	6	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
HNRNPK	3190	genome.wustl.edu	37	9	86592656	86592656	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002140.3	-1	reviewed	p.R35K	1.000	261	0%	113	33.6%	408	48.2%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_ROKNT,superfamily_Eukaryotic type KH-domain (KH-domain type I)
SLC28A3	64078	genome.wustl.edu	37	9	86894223	86894223	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022127.1	-1	provisional	p.N636D	0.009	231	0%	95	36.8%	1	0%	benign(0.004)	tolerated(0.1)	neutral(0.286)	NULL
SLC28A3	64078	genome.wustl.edu	37	9	86914552	86914552	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022127.1	-1	provisional	p.G205S	1.000	166	0%	62	48.4%	0	-	benign(0.024)	tolerated(0.53)	neutral(0.009)	HMMPfam_Nucleos_tra2_N
NTRK2	4915	genome.wustl.edu	37	9	87317142	87317142	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006180.3	+1	reviewed	p.R94I	0.991	164	0%	85	43.5%	0	-	possibly_damaging(0.697)	tolerated(0.18)	neutral(0.306)	superfamily_SSF52058
NTRK2	4915	genome.wustl.edu	37	9	87482189	87482189	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006180.3	+1	reviewed	p.D492	1.000	50	0%	37	10.8%	1	0%	-	-	-	NULL
AGTPBP1	23287	genome.wustl.edu	37	9	88203344	88203344	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015239.2	-1	validated	p.T884	0.445	266	0%	90	44.4%	11	9%	-	-	-	HMMPfam_Peptidase_M14,superfamily_SSF53187
AGTPBP1	23287	genome.wustl.edu	37	9	88204597	88204597	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015239.2	-1	validated	e19-1	1.000	206	0%	73	34.2%	0	-	-	-	-	-
AGTPBP1	23287	genome.wustl.edu	37	9	88233950	88233950	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015239.2	-1	validated	p.A721	0.854	368	0%	118	35.6%	3	33.3%	-	-	-	NULL
NAA35	60560	genome.wustl.edu	37	9	88573409	88573409	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024635.3	+1	validated	p.S61P	1.000	448	0%	247	45.3%	5	60%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_Mak10
NAA35	60560	genome.wustl.edu	37	9	88624800	88624800	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024635.3	+1	validated	p.H415R	1.000	347	0%	178	46.6%	12	58.3%	possibly_damaging(0.7)	tolerated(0.38)	neutral(0.269)	NULL
NAA35	60560	genome.wustl.edu	37	9	88633177	88633177	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024635.3	+1	validated	p.V594A	0.999	155	0%	80	45%	24	54.1%	benign(0.009)	tolerated(1)	neutral(0.001)	NULL
DAPK1	1612	genome.wustl.edu	37	9	90321475	90321475	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004938.2	+1	reviewed	p.G1163	0.000	9	0.000	17	0.471	37	35.1%	-	-	-	NULL
C9orf79	286234	genome.wustl.edu	37	9	90499883	90499883	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178828.4	+1	validated	p.P161S	0.000	8	0.000	13	0.385	0	-	benign(0.377)	tolerated(0.1)	neutral(0.407)	NULL
FAM75C1	441452	genome.wustl.edu	37	9	90535672	90535672	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145124.1	+1	validated	p.G284S	0.000	106	0%	111	45.9%	0	-	-	-	-	NULL
FAM75C1	441452	genome.wustl.edu	37	9	90537820	90537820	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145124.1	+1	validated	p.V1000I	0.001	691	0.1%	503	53.3%	0	-	-	-	-	NULL
LOC286238	286238	genome.wustl.edu	37	9	91266879	91266879	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100111.1	-1	validated	p.R22G	0.000	314	0%	159	43.4%	0	-	-	-	-	NULL
GADD45G	10912	genome.wustl.edu	37	9	92220618	92220618	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006705.3	+1	reviewed	p.A64	0.087	25	0%	29	44.8%	15	20%	-	-	-	HMMPfam_Ribosomal_L7Ae
NFIL3	4783	genome.wustl.edu	37	9	94171921	94171921	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005384.2	-1	validated	p.E366K	0.989	84	0%	71	35.2%	40	50%	benign(0.4)	deleterious(0.02)	deleterious(0.512)	HMMPfam_Vert_IL3-reg_TF
ROR2	4920	genome.wustl.edu	37	9	94486807	94486807	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004560.2	-1	reviewed	p.R657C	1.000	14	0%	16	50%	6	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
IARS	3376	genome.wustl.edu	37	9	95022445	95022445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002161.4	-1	reviewed	p.A620V	1.000	312	0%	147	21.8%	54	14.8%	possibly_damaging(0.561)	deleterious(0.01)	deleterious(0.597)	HMMPfam_tRNA-synt_1,superfamily_SSF52374
BICD2	23299	genome.wustl.edu	37	9	95481795	95481795	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003800.1	-1	reviewed	p.G378C	1.000	8	0.000	16	0.375	23	39.1%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_BicD
BICD2	23299	genome.wustl.edu	37	9	95482773	95482773	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003800.1	-1	reviewed	p.E291K	0.997	63	1.6%	55	41.8%	30	40%	probably_damaging(0.996)	tolerated(0.82)	neutral(0.462)	HMMPfam_BicD
BICD2	23299	genome.wustl.edu	37	9	95482841	95482841	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003800.1	-1	reviewed	p.N268T	0.995	111	0%	97	45.4%	34	61.7%	benign(0.291)	tolerated(0.43)	neutral(0.103)	HMMPfam_BicD
ZNF484	83744	genome.wustl.edu	37	9	95608679	95608679	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031486.1	-1	provisional	p.I797S	0.998	545	0%	259	43.6%	3	66.6%	possibly_damaging(0.722)	tolerated(0.15)	deleterious(0.503)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
FGD3	89846	genome.wustl.edu	37	9	95778046	95778046	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083536.1	+1	validated	p.P404S	1.000	51	0%	52	53.8%	5	60%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
SUSD3	203328	genome.wustl.edu	37	9	95841808	95841808	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145006.2	+1	provisional	p.A161S	0.000	11	0%	15	46.7%	5	20%	possibly_damaging(0.482)	tolerated(0.44)	neutral(0.173)	NULL
WNK2	65268	genome.wustl.edu	37	9	96055443	96055443	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006648.3	+1	reviewed	p.S1899N	0.989	18	0%	13	46.2%	24	62.5%	benign(0.23)	deleterious(0.05)	neutral(0.368)	NULL
FAM120A	23196	genome.wustl.edu	37	9	96320201	96320201	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014612.3	+1	validated	p.P859	0.062	15	0%	13	38.5%	151	43.7%	-	-	-	NULL
FAM120A	23196	genome.wustl.edu	37	9	96326645	96326645	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014612.3	+1	validated	p.P1060	0.098	21	0%	15	53.3%	106	50.9%	-	-	-	NULL
PHF2	5253	genome.wustl.edu	37	9	96411441	96411441	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005392.3	+1	reviewed	p.S183	1.000	28	0%	21	38.1%	24	29.1%	-	-	-	superfamily_SSF51197
PHF2	5253	genome.wustl.edu	37	9	96428011	96428011	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005392.3	+1	reviewed	p.A661T	1.000	29	0%	25	40%	19	31.5%	benign(0.001)	tolerated(0.68)	neutral(0.002)	NULL
PTPDC1	138639	genome.wustl.edu	37	9	96847596	96847596	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152422.3	+1	reviewed	p.P101L	1.000	102	0%	77	48.1%	3	66.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FAM22F	54754	genome.wustl.edu	37	9	97081004	97081004	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017561.1	-1	validated	p.P672S	0.000	79	0%	90	44.4%	0	-	probably_damaging(0.996)	tolerated(0.75)	neutral(0.463)	NULL
FAM22F	54754	genome.wustl.edu	37	9	97084540	97084540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017561.1	-1	validated	p.R262Q	0.068	51	0%	54	51.9%	0	-	benign(0.146)	tolerated(1)	neutral(0.013)	NULL
HIATL1	84641	genome.wustl.edu	37	9	97203377	97203377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032558.2	+1	validated	p.G169E	1.000	184	0%	109	43.1%	37	56.7%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
HIATL1	84641	genome.wustl.edu	37	9	97209146	97209146	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032558.2	+1	validated	p.I257	1.000	460	0%	221	18.1%	43	13.9%	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
FBP2	8789	genome.wustl.edu	37	9	97329624	97329624	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003837.2	-1	reviewed	p.S211	1.000	261	0%	167	19.8%	1	0%	-	-	-	HMMPfam_FBPase,superfamily_SSF56655
PTCH1	5727	genome.wustl.edu	37	9	98215774	98215774	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000264.3	-1	reviewed	p.F1145	1.000	16	0%	20	35%	9	66.6%	-	-	-	HMMPfam_Patched,superfamily_SSF82866
PTCH1	5727	genome.wustl.edu	37	9	98220525	98220525	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000264.3	-1	reviewed	p.G980C	1.000	23	0%	22	63.6%	10	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Patched
PTCH1	5727	genome.wustl.edu	37	9	98232138	98232138	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000264.3	-1	reviewed	p.R602*	0.998	142	0%	82	48.8%	7	28.5%	-	-	-	HMMPfam_Patched
C9orf102	375748	genome.wustl.edu	37	9	98678055	98678065	+	Frame_Shift_Del	DEL	CCTCACTGGAA	CCTCACTGGAA	-	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	CCTCACTGGAA	CCTCACTGGAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010895.2	+1	validated	p.L310fs	0.992:1.000:1.000:1.000:1.000:1.000:0.914:1.000:1.000:0.943:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
C9orf102	375748	genome.wustl.edu	37	9	98678625	98678625	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010895.2	+1	validated	p.A367V	1.000	45	0%	21	52.4%	3	100%	possibly_damaging(0.692)	tolerated(1)	neutral(0.247)	HMMPfam_SNF2_N
HSD17B3	3293	genome.wustl.edu	37	9	99008845	99008845	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000197.1	-1	reviewed	p.E173K	0.998	134	0%	84	46.4%	0	-	benign(0.382)	tolerated(0.05)	neutral(0.467)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
SLC35D2	11046	genome.wustl.edu	37	9	99113454	99113454	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007001.2	-1	validated	e6-1	1.000	188	0%	114	43%	0	-	-	-	-	-
AAED1	195827	genome.wustl.edu	37	9	99404043	99404043	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000446045	-1	known	p.V180A	1.000	155	0%	81	49.4%	17	58.8%	-	-	-	NULL
FAM22G	441457	genome.wustl.edu	37	9	99694196	99694196	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001045477.2	+1	validated	p.G70A	0.001	10	0%	13	38.5%	0	-	benign(0.006)	deleterious(0)	neutral(0.445)	NULL
ZNF322P1	387328	genome.wustl.edu	37	9	99960875	99960875	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199005.1	-1	validated	p.D307Y	0.067	360	0%	181	43.6%	7	0%	benign(0.015)	tolerated(0.52)	neutral(0.009)	HMMSmart_ZnF_C2H2,superfamily_SSF57667
C9orf174	100499483	genome.wustl.edu	37	9	100117252	100117252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020893.1	+1	predicted	p.R1091W	0.989	127	0%	71	50.7%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TDRD7	23424	genome.wustl.edu	37	9	100204091	100204091	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014290.2	+1	validated	p.E263	1.000	192	0%	44	31.8%	1	100%	-	-	-	NULL
C9orf156	51531	genome.wustl.edu	37	9	100678527	100678527	+	Missense_Mutation	SNP	C	C	T	rs149721127	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016481.3	-1	validated	p.R57Q	0.998	190	0%	102	46.1%	2	50%	probably_damaging(0.979)	deleterious(0.04)	deleterious(0.771)	HMMPfam_UPF0066
HEMGN	55363	genome.wustl.edu	37	9	100692788	100692788	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018437.3	-1	validated	p.L297I	0.008	860	0%	541	21.6%	0	-	benign(0.004)	tolerated(0.34)	neutral(0.023)	NULL
HEMGN	55363	genome.wustl.edu	37	9	100693242	100693242	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018437.3	-1	validated	p.E145D	0.001	309	0%	200	37.5%	0	-	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	NULL
HEMGN	55363	genome.wustl.edu	37	9	100693500	100693500	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018437.3	-1	validated	p.E59D	1.000	282	0%	161	37.9%	0	-	possibly_damaging(0.478)	tolerated(0.07)	deleterious(0.477)	NULL
CORO2A	7464	genome.wustl.edu	37	9	100892140	100892140	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003389.3	-1	reviewed	p.S301	0.875	51	0%	49	40.8%	16	68.7%	-	-	-	superfamily_WD40 repeat-like,HMMPfam_DUF1900
TBC1D2	55357	genome.wustl.edu	37	9	100963826	100963826	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018421.3	-1	validated	p.A798T	1.000	12	0%	17	41.2%	15	53.3%	possibly_damaging(0.692)	tolerated(0.05)	deleterious(0.593)	HMMPfam_TBC,HMMSmart_TBC,superfamily_RabGAP_TBC
ANKS6	203286	genome.wustl.edu	37	9	101507888	101507888	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173551.3	-1	provisional	p.S822P	0.985	126	0%	76	17.1%	20	25%	benign(0.169)	tolerated(0.58)	neutral(0.021)	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
ANKS6	203286	genome.wustl.edu	37	9	101507925	101507925	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444472	-1	known	p.R279W	0.982	107	0%	73	41.1%	12	25%	-	-	-	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
ANKS6	203286	genome.wustl.edu	37	9	101530498	101530498	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444472	-1	known	p.C138R	0.953	32	0%	27	55.6%	12	75%	-	-	-	NULL
GALNT12	79695	genome.wustl.edu	37	9	101599406	101599406	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024642.3	+1	validated	p.Y396	1.000	51	0%	37	43.2%	29	44.8%	-	-	-	superfamily_Nucleotide-diphospho-sugar transferases
COL15A1	1306	genome.wustl.edu	37	9	101759229	101759229	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001855.3	+1	reviewed	p.K273T	0.087	259	0%	167	38.9%	15	6.6%	benign(0.037)	tolerated(0.1)	neutral(0.288)	NULL
COL15A1	1306	genome.wustl.edu	37	9	101829215	101829215	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001855.3	+1	reviewed	p.F1235V	1.000	137	0%	65	33.8%	25	0%	benign(0.105)	-	-	HMMPfam_Endostatin,superfamily_C-type_lectin_fold
TGFBR1	7046	genome.wustl.edu	37	9	101900146	101900146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004612.2	+1	reviewed	p.P194S	1.000	356	0%	105	17.1%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TGF_beta_GS,HMMSmart_SM00467,superfamily_Protein kinase-like (PK-like)
TGFBR1	7046	genome.wustl.edu	37	9	101904970	101904970	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004612.2	+1	reviewed	p.I320V	1.000	118	0%	43	48.8%	10	40%	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SEC61B	10952	genome.wustl.edu	37	9	101990216	101990216	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006808.2	+1	reviewed	p.R46H	1.000	62	0%	47	31.9%	280	33.9%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
KRT8P11	347265	genome.wustl.edu	37	9	102067610	102067610	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000409686	+1	known	p.A73T	0.988	17	0.000	8	0.625	0	-	benign(0.177)	tolerated(0.46)	neutral(0.029)	NULL
INVS	27130	genome.wustl.edu	37	9	103054739	103054739	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014425.2	+1	reviewed	p.R734W	0.035	27	0%	27	51.9%	3	100%	probably_damaging(0.967)	deleterious(0)	deleterious(0.853)	NULL
INVS	27130	genome.wustl.edu	37	9	103055024	103055024	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014425.2	+1	reviewed	p.R829C	0.002	59	1.7%	38	39.5%	5	40%	possibly_damaging(0.848)	deleterious(0)	deleterious(0.770)	NULL
TEX10	54881	genome.wustl.edu	37	9	103091437	103091437	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017746.3	-1	validated	p.R537I	0.142	306	0%	102	32.4%	11	9%	benign(0.025)	tolerated(0.05)	neutral(0.346)	NULL
ZNF189	7743	genome.wustl.edu	37	9	104171355	104171355	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003452.2	+1	validated	p.E435D	0.992	90	0%	32	46.9%	2	100%	benign(0.005)	deleterious(0)	neutral(0.445)	NULL
ALDOB	229	genome.wustl.edu	37	9	104187223	104187223	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000035.3	-1	reviewed	p.S301P	1.000	63	0%	26	50%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glycolytic,superfamily_Aldolase
ALDOB	229	genome.wustl.edu	37	9	104189911	104189911	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000035.3	-1	reviewed	p.L131	1.000	69	0%	31	51.6%	0	-	-	-	-	HMMPfam_Glycolytic,superfamily_Aldolase
C9orf125	84302	genome.wustl.edu	37	9	104239353	104239353	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032342.1	-1	provisional	p.A8S	1.000	26	0%	26	38.5%	0	-	possibly_damaging(0.875)	deleterious(0)	deleterious(0.784)	NULL
RNF20	56254	genome.wustl.edu	37	9	104302835	104302835	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019592.5	+1	reviewed	p.L121I	0.968	107	0%	72	43.1%	24	29.1%	unknown(0)	tolerated(0.4)	-	NULL
CYLC2	1539	genome.wustl.edu	37	9	105767471	105767471	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001340.3	+1	reviewed	p.K186	0.473	334	0%	179	43%	0	-	-	-	-	NULL
CYLC2	1539	genome.wustl.edu	37	9	105767867	105767867	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001340.3	+1	reviewed	p.D318	0.000	194	0%	106	18.9%	0	-	-	-	-	NULL
SMC2	10592	genome.wustl.edu	37	9	106878520	106878520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042550.1	+1	validated	p.R571C	1.000	255	0%	77	42.9%	27	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_Smc hinge domain,superfamily_P-loop containing nucleoside triphosphate hydrolases
OR13F1	138805	genome.wustl.edu	37	9	107266748	107266748	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004485.1	+1	provisional	p.L69M	0.069	209	0%	112	42.9%	0	-	benign(0.22)	tolerated(0.07)	neutral(0.341)	HMMPfam_7tm_1,superfamily_SSF81321
OR13C3	138803	genome.wustl.edu	37	9	107298198	107298198	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001961.1	-1	provisional	p.G299	0.000	254	0%	87	46%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
FSD1L	83856	genome.wustl.edu	37	9	108230572	108230572	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145313.1	+1	validated	p.K102N	1.000	252	0%	73	37%	1	100%	possibly_damaging(0.908)	deleterious(0)	deleterious(0.806)	HMMSmart_SM00502
ZNF462	58499	genome.wustl.edu	37	9	109689069	109689069	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021224.4	+1	validated	p.F959C	1.000	50	0%	39	41%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_beta-sandwich domain of Sec23/24
ZNF462	58499	genome.wustl.edu	37	9	109689803	109689803	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021224.4	+1	validated	p.T1204P	1.000	39	0%	40	22.5%	3	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,superfamily_beta-sandwich domain of Sec23/24
ZNF462	58499	genome.wustl.edu	37	9	109701307	109701307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021224.4	+1	validated	p.R2116W	1.000	103	0%	63	15.9%	12	8.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_beta-sandwich domain of Sec23/24
ACTL7A	10881	genome.wustl.edu	37	9	111624954	111624954	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006687.2	+1	reviewed	p.V118M	1.000	83	0%	49	51%	0	-	possibly_damaging(0.924)	deleterious(0)	deleterious(0.818)	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
IKBKAP	8518	genome.wustl.edu	37	9	111641010	111641010	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003640.3	-1	reviewed	p.R1198Q	0.995	53	0%	55	43.6%	16	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CTNNAL1	8727	genome.wustl.edu	37	9	111761528	111761528	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003798.2	-1	provisional	p.T50	0.995	397	0%	96	45.8%	12	16.6%	-	-	-	HMMPfam_Vinculin
TMEM245	23731	genome.wustl.edu	37	9	111853209	111853209	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032012.3	-1	validated	p.P381	0.000	127	0.8%	60	48.3%	16	56.2%	-	-	-	NULL
PTPN3	5774	genome.wustl.edu	37	9	112141680	112141680	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026918.1	-1	reviewed	NULL	0.024	36	0%	23	26.1%	9	44.4%	-	-	-	-
PTPN3	5774	genome.wustl.edu	37	9	112153772	112153772	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002829.3	-1	reviewed	p.R675*	0.966	289	0%	193	41.5%	5	20%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
PALM2-AKAP2	445815	genome.wustl.edu	37	9	112629808	112629808	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007203.4	+1	validated	p.R28L	0.998	70	0%	40	45%	1	100%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
PALM2-AKAP2	445815	genome.wustl.edu	37	9	112898778	112898778	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007203.4	+1	validated	p.V318	0.000	36	0%	44	50%	6	16.6%	-	-	-	NULL
PALM2-AKAP2	445815	genome.wustl.edu	37	9	112899132	112899132	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007203.4	+1	validated	p.C436W	0.052	50	0%	32	34.4%	5	40%	possibly_damaging(0.952)	tolerated(0.16)	neutral(0.455)	NULL
TXNDC8	255220	genome.wustl.edu	37	9	113096539	113096539	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003936.2	-1	validated	p.S29L	1.000	111	0%	44	31.8%	0	-	possibly_damaging(0.484)	deleterious(0.01)	deleterious(0.566)	superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin
SVEP1	79987	genome.wustl.edu	37	9	113141762	113141762	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153366.3	-1	validated	p.A3425T	1.000	136	0.7%	55	18.2%	1	0%	probably_damaging(0.996)	tolerated(0.27)	deleterious(0.495)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
SVEP1	79987	genome.wustl.edu	37	9	113192284	113192284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153366.3	-1	validated	p.A1844V	0.998	237	0%	80	41.2%	0	-	probably_damaging(0.991)	tolerated(0.55)	neutral(0.451)	superfamily_Complement control module/SCR domain
SVEP1	79987	genome.wustl.edu	37	9	113205823	113205823	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153366.3	-1	validated	e27+2	1.000	80	0%	45	46.7%	0	-	-	-	-	-
MUSK	4593	genome.wustl.edu	37	9	113459713	113459713	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005592.3	+1	reviewed	p.A199S	1.000	122	0%	71	49.3%	0	-	benign(0.199)	tolerated(0.27)	neutral(0.053)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
LPAR1	1902	genome.wustl.edu	37	9	113704261	113704261	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001401.3	-1	reviewed	p.R78H	1.000	39	0%	27	59.3%	20	55%	possibly_damaging(0.892)	tolerated(0.07)	deleterious(0.670)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
KIAA0368	23392	genome.wustl.edu	37	9	114124334	114124334	+	Splice_Site	SNP	C	C	A	rs71773836		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000374378	-1	known	e4-1	1.000	368	0%	108	39.8%	99	46.4%	-	-	-	-
KIAA0368	23392	genome.wustl.edu	37	9	114155135	114155135	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080398.1	-1	provisional	p.G1180D	1.000	342	0%	128	52.3%	31	61.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM repeat
KIAA0368	23392	genome.wustl.edu	37	9	114195648	114195648	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080398.1	-1	provisional	p.K416T	1.000	108	0%	74	29.7%	18	72.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM repeat
C9orf84	158401	genome.wustl.edu	37	9	114538191	114538191	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173521.3	-1	validated	p.N44H	1.000	361	0%	121	52.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
UGCG	7357	genome.wustl.edu	37	9	114693613	114693613	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003358.1	+1	reviewed	p.S267F	1.000	479	0%	219	45.2%	15	33.3%	benign(0.079)	deleterious(0.03)	neutral(0.370)	superfamily_SSF53448
KIAA1958	158405	genome.wustl.edu	37	9	115336773	115336773	+	Missense_Mutation	SNP	A	A	G	rs189232038	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133465.2	+1	predicted	p.Y138C	1.000	248	0%	126	43.7%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C9orf80	58493	genome.wustl.edu	37	9	115449885	115449885	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021218.1	-1	provisional	p.F83S	1.000	223	0%	84	39.3%	31	51.6%	possibly_damaging(0.485)	deleterious(0)	deleterious(0.606)	NULL
ZNF883	169834	genome.wustl.edu	37	9	115760522	115760522	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101338.1	-1	validated	p.I6M	1.000	31	0%	15	33.3%	0	-	-	-	-	NULL
ZFP37	7539	genome.wustl.edu	37	9	115818887	115818887	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003408.1	-1	provisional	p.A28T	0.005	52	0%	46	41.3%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
FKBP15	23307	genome.wustl.edu	37	9	115950683	115950683	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015258.1	-1	validated	p.Q421R	1.000	24	0%	12	58.3%	22	36.3%	possibly_damaging(0.528)	deleterious(0.04)	deleterious(0.527)	NULL
WDR31	114987	genome.wustl.edu	37	9	116083819	116083819	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012361.1	-1	reviewed	p.L204I	0.758	261	0%	137	42.3%	1	0%	benign(0.001)	tolerated(0.51)	neutral(0.009)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
ALAD	210	genome.wustl.edu	37	9	116155824	116155824	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000031.5	-1	reviewed	p.V6I	0.368	41	0%	39	69.2%	40	42.5%	benign(0)	tolerated(0.97)	-	HMMPfam_ALAD,superfamily_SSF51569
POLE3	54107	genome.wustl.edu	37	9	116172003	116172003	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017443.4	-1	validated	p.N53T	1.000	79	0%	57	26.3%	34	17.6%	benign(0.045)	tolerated(0.89)	neutral(0.003)	HMMPfam_CBFD_NFYB_HMF,superfamily_Histone-fold
RGS3	5998	genome.wustl.edu	37	9	116359068	116359068	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144488.4	+1	reviewed	p.T1144	0.004	15	0%	13	30.8%	53	22.6%	-	-	-	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS
RGS3	5998	genome.wustl.edu	37	9	116359133	116359133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144488.4	+1	reviewed	p.R1166H	1.000	25	0%	25	32%	41	39%	probably_damaging(0.998)	tolerated(0.05)	deleterious(0.820)	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS
ZNF618	114991	genome.wustl.edu	37	9	116811675	116811675	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133374.2	+1	validated	p.T605M	1.000	13	0%	13	38.5%	12	66.6%	probably_damaging(1)	tolerated(0.18)	deleterious(0.556)	NULL
AKNA	80709	genome.wustl.edu	37	9	117139235	117139235	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030767.4	-1	validated	p.T284	0.000	140	0%	128	33.6%	8	37.5%	-	-	-	NULL
AKNA	80709	genome.wustl.edu	37	9	117139760	117139760	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030767.4	-1	validated	p.A109	0.592	21	0%	25	40%	4	25%	-	-	-	NULL
TNC	3371	genome.wustl.edu	37	9	117793900	117793900	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002160.2	-1	validated	p.Y1951C	1.000	210	1%	118	38.1%	30	26.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
TNC	3371	genome.wustl.edu	37	9	117852956	117852956	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002160.2	-1	validated	p.A114	0.000	13	0%	14	50%	7	28.5%	-	-	-	NULL
PAPPA	5069	genome.wustl.edu	37	9	119065047	119065047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002581.3	+1	reviewed	p.R989W	1.000	109	0%	54	20.4%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_SSF55486
PAPPA	5069	genome.wustl.edu	37	9	119115007	119115007	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002581.3	+1	reviewed	p.C1329W	0.994	22	0%	19	42.1%	2	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_CCP,superfamily_Complement_control_module,superfamily_SSF55486
ASTN2	23245	genome.wustl.edu	37	9	119249662	119249662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198187.3	-1	reviewed	p.C1158Y	1.000	50	0%	37	32.4%	4	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_fn3,superfamily_Fibronectin type III
TRIM32	22954	genome.wustl.edu	37	9	119460597	119460597	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099679.1	+1	reviewed	p.E192	0.950	34	0%	34	38.2%	15	26.6%	-	-	-	NULL
ASTN2	23245	genome.wustl.edu	37	9	119737522	119737522	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198187.3	-1	reviewed	p.T618	0.009	30	0%	16	43.8%	1	0%	-	-	-	NULL
ASTN2	23245	genome.wustl.edu	37	9	119976913	119976913	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198187.3	-1	reviewed	p.E247*	1.000	22	0%	24	58.3%	0	-	-	-	-	NULL
DBC1	1620	genome.wustl.edu	37	9	121929449	121929449	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014618.2	-1	validated	p.S733	1.000	130	0%	97	47.4%	0	-	-	-	-	NULL
CDK5RAP2	55755	genome.wustl.edu	37	9	123169475	123169475	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018249.4	-1	reviewed	p.S1593N	0.822	33	0%	27	51.9%	21	76.1%	benign(0.026)	tolerated(0.91)	neutral(0.001)	NULL
CDK5RAP2	55755	genome.wustl.edu	37	9	123173713	123173713	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018249.4	-1	reviewed	p.S1446N	0.994	291	0%	170	43.5%	14	92.8%	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
CDK5RAP2	55755	genome.wustl.edu	37	9	123177384	123177384	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018249.4	-1	reviewed	p.E1411*	1.000	366	0.3%	177	36.2%	9	11.1%	-	-	-	NULL
CDK5RAP2	55755	genome.wustl.edu	37	9	123292400	123292400	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018249.4	-1	reviewed	p.K227N	0.990	196	0.5%	104	36.5%	9	11.1%	benign(0.016)	tolerated(0.22)	neutral(0.043)	NULL
MEGF9	1955	genome.wustl.edu	37	9	123374717	123374717	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080497.1	-1	provisional	p.R385	1.000	274	0.4%	151	53.6%	5	80%	-	-	-	PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_Growth factor receptor domain
FBXW2	26190	genome.wustl.edu	37	9	123526948	123526948	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012164.3	-1	reviewed	p.G418	1.000	56	0%	49	55.1%	48	47.9%	-	-	-	superfamily_WD40 repeat-like
FBXW2	26190	genome.wustl.edu	37	9	123550474	123550474	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012164.3	-1	reviewed	p.T21	1.000	58	0%	37	51.4%	1	100%	-	-	-	NULL
PSMD5	5711	genome.wustl.edu	37	9	123580293	123580293	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005047.2	-1	reviewed	p.I469T	0.993	208	0%	107	43%	20	20%	benign(0)	tolerated(0.22)	neutral(0.042)	HMMPfam_Proteasom_PSMB
PSMD5	5711	genome.wustl.edu	37	9	123589136	123589136	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005047.2	-1	reviewed	p.R241*	1.000	140	0%	62	50%	9	0%	-	-	-	superfamily_ARM-type_fold,HMMPfam_Proteasom_PSMB
PHF19	26147	genome.wustl.edu	37	9	123620512	123620512	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015651.1	-1	validated	p.L485M	0.795	15	0%	23	39.1%	6	33.3%	probably_damaging(0.996)	tolerated(0.25)	deleterious(0.498)	NULL
TRAF1	7185	genome.wustl.edu	37	9	123686038	123686038	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005658.3	-1	reviewed	p.R58K	0.974	92	0%	66	43.9%	2	50%	benign(0)	tolerated(0.94)	-	NULL
CNTRL	11064	genome.wustl.edu	37	9	123906322	123906322	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007018.4	+1	reviewed	p.H1005N	1.000	102	0%	33	39.4%	7	28.5%	probably_damaging(0.98)	deleterious(0.05)	deleterious(0.769)	NULL
CNTRL	11064	genome.wustl.edu	37	9	123907198	123907198	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007018.4	+1	reviewed	p.I1043	0.757	30	0%	24	50%	5	80%	-	-	-	NULL
CNTRL	11064	genome.wustl.edu	37	9	123907526	123907526	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007018.4	+1	reviewed	p.R1058Q	0.009	239	0%	97	32%	7	28.5%	benign(0.002)	deleterious(0.01)	neutral(0.406)	NULL
GSN	2934	genome.wustl.edu	37	9	124086863	124086863	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000177.4	+1	reviewed	p.A504T	0.984	25	0%	29	37.9%	189	35.4%	benign(0.001)	tolerated(1)	-	HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_Actin depolymerizing proteins
DAB2IP	153090	genome.wustl.edu	37	9	124528908	124528908	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032552.2	+1	validated	p.S504	0.705	30	0%	40	52.5%	37	54%	-	-	-	HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP
DAB2IP	153090	genome.wustl.edu	37	9	124530834	124530834	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032552.2	+1	validated	p.F579	0.999	21	0%	33	39.4%	37	56.7%	-	-	-	HMMSmart_SM00323,superfamily_GTPase activation domain GAP
DAB2IP	153090	genome.wustl.edu	37	9	124536671	124536671	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032552.2	+1	validated	p.E1006K	1.000	19	0%	15	40%	22	40.9%	possibly_damaging(0.484)	tolerated(0.18)	neutral(0.216)	NULL
TTLL11	158135	genome.wustl.edu	37	9	124751690	124751690	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139442.1	-1	validated	p.S441	0.752	89	0%	85	41.2%	3	100%	-	-	-	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like
TTLL11	158135	genome.wustl.edu	37	9	124751810	124751810	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139442.1	-1	validated	p.E401D	1.000	73	0%	54	35.2%	4	50%	probably_damaging(0.992)	tolerated(0.07)	deleterious(0.766)	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like
LHX6	26468	genome.wustl.edu	37	9	124975963	124975963	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014368.3	-1	reviewed	p.L326M	1.000	9	0.000	11	0.455	1	0%	possibly_damaging(0.8)	tolerated(0.21)	neutral(0.345)	NULL
OR1J4	26219	genome.wustl.edu	37	9	125281522	125281522	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004452.1	+1	provisional	p.Y35H	1.000	102	0%	80	41.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_Family A G protein-coupled receptor-like
OR1L6	392390	genome.wustl.edu	37	9	125512604	125512604	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004453.2	+1	validated	p.R196C	0.029	72	0%	48	25%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_7tm_1,superfamily_SSF81321
OR5C1	392391	genome.wustl.edu	37	9	125551381	125551381	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001923.1	+1	provisional	p.A57V	0.003	35	0%	56	46.4%	0	-	benign(0.221)	tolerated(0.11)	neutral(0.294)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR5C1	392391	genome.wustl.edu	37	9	125551796	125551796	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001923.1	+1	provisional	p.D195	0.999	50	0%	38	39.5%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PDCL	5082	genome.wustl.edu	37	9	125582471	125582471	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005388.3	-1	reviewed	p.F267V	1.000	111	0%	65	12.3%	33	21.2%	possibly_damaging(0.873)	deleterious(0)	deleterious(0.784)	HMMPfam_Phosducin,superfamily_Thioredoxin-like
RC3H2	54542	genome.wustl.edu	37	9	125612042	125612042	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100588.1	-1	validated	p.S1147Y	1.000	182	0%	114	11.4%	20	30%	benign(0.076)	deleterious(0)	neutral(0.450)	NULL
RC3H2	54542	genome.wustl.edu	37	9	125627702	125627702	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100588.1	-1	validated	p.T520	0.998	205	0%	154	47.4%	10	60%	-	-	-	NULL
RC3H2	54542	genome.wustl.edu	37	9	125659637	125659637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100588.1	-1	validated	p.P51H	1.000	108	0%	66	25.8%	21	47.6%	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	HMMSmart_SM00184,superfamily_RING/U-box
GPR21	2844	genome.wustl.edu	37	9	125797447	125797447	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005294.1	+1	provisional	p.A201V	1.000	80	0%	51	35.3%	0	-	benign(0.015)	tolerated(0.4)	neutral(0.017)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RABGAP1	23637	genome.wustl.edu	37	9	125861826	125861826	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012197.3	+1	validated	p.R963W	1.000	370	0%	189	48.1%	26	38.4%	probably_damaging(0.996)	deleterious(0.03)	deleterious(0.826)	NULL
STRBP	55342	genome.wustl.edu	37	9	125932245	125932245	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018387.4	-1	validated	p.T157	0.010	356	0%	126	48.4%	19	52.6%	-	-	-	HMMPfam_DZF,HMMSmart_SM00572
STRBP	55342	genome.wustl.edu	37	9	125932299	125932299	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018387.4	-1	validated	p.V139	1.000	402	0%	125	41.6%	23	43.4%	-	-	-	HMMPfam_DZF,HMMSmart_SM00572
STRBP	55342	genome.wustl.edu	37	9	125941496	125941496	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018387.4	-1	validated	p.R5Q	1.000	174	0%	98	46.9%	16	43.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DENND1A	57706	genome.wustl.edu	37	9	126219682	126219682	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020946.1	-1	validated	p.S377	0.394	164	0%	94	39.4%	17	35.2%	-	-	-	NULL
GPR144	347088	genome.wustl.edu	37	9	127219010	127219010	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000334810	+1	known	p.A520D	0.000	8	0.000	15	0.333	0	-	probably_damaging(0.962)	tolerated(0.06)	deleterious(0.728)	NULL
NR6A1	2649	genome.wustl.edu	37	9	127289154	127289154	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033334.2	-1	reviewed	p.I369V	1.000	53	0%	37	18.9%	1	0%	benign(0.001)	tolerated(0.98)	-	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
WDR38	401551	genome.wustl.edu	37	9	127619016	127619016	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001045476.1	+1	provisional	p.S208	0.781	23	0%	27	44.4%	1	0%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
GOLGA1	2800	genome.wustl.edu	37	9	127644207	127644207	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002077.3	-1	reviewed	p.F664	1.000	147	0%	83	44.6%	12	50%	-	-	-	NULL
PPP6C	5537	genome.wustl.edu	37	9	127933378	127933378	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123355.1	-1	reviewed	p.D90N	1.000	259	0%	134	41.8%	42	64.2%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Metallophos,HMMSmart_PP2Ac,superfamily_SSF56300
RABEPK	10244	genome.wustl.edu	37	9	127975748	127975748	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005833.3	+1	validated	p.F104S	1.000	134	0%	77	14.3%	34	11.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_2
HSPA5	3309	genome.wustl.edu	37	9	128001497	128001497	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005347.3	-1	validated	p.G240D	1.000	67	0%	57	40.4%	824	47.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_HSP70,superfamily_Actin-like ATPase domain
GAPVD1	26130	genome.wustl.edu	37	9	128099689	128099689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015635.2	+1	validated	p.R926Q	1.000	65	0%	46	41.3%	13	46.1%	probably_damaging(0.999)	tolerated(0.29)	deleterious(0.519)	NULL
PBX3	5090	genome.wustl.edu	37	9	128692121	128692121	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006195.5	+1	validated	p.A235V	1.000	175	0%	100	39%	6	33.3%	benign(0.092)	tolerated(0.06)	neutral(0.330)	HMMSmart_SM00389,superfamily_Homeodomain-like
ZBTB34	403341	genome.wustl.edu	37	9	129642386	129642386	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099270.1	+1	validated	p.T232	0.002	81	0%	60	35%	5	20%	-	-	-	NULL
ANGPTL2	23452	genome.wustl.edu	37	9	129853993	129853993	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012098.2	-1	reviewed	p.G413D	1.000	29	0%	27	44.4%	25	44%	possibly_damaging(0.655)	tolerated(0.29)	neutral(0.260)	HMMPfam_Fibrinogen_C,HMMSmart_FBG,superfamily_Fibrinogen_a/b/g_C
GARNL3	84253	genome.wustl.edu	37	9	130145810	130145810	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032293.4	+1	validated	p.A752D	1.000	242	0%	175	36.6%	5	80%	benign(0.314)	tolerated(0.06)	neutral(0.420)	HMMPfam_CNH,HMMSmart_SM00036
RPL12	6136	genome.wustl.edu	37	9	130211949	130211949	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000976.2	-1	reviewed	p.T50	0.338	130	0%	84	17.9%	1615	10.4%	-	-	-	HMMPfam_Ribosomal_L11_N,HMMSmart_SM00649,superfamily_Ribosomal protein L11 N-terminal domain
STXBP1	6812	genome.wustl.edu	37	9	130420674	130420674	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003165.3	+1	reviewed	p.R64C	1.000	136	0%	79	43%	9	22.2%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
C9orf117	286207	genome.wustl.edu	37	9	130471846	130471846	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012502.2	+1	predicted	p.E103K	0.783	31	3.2%	19	57.9%	4	75%	possibly_damaging(0.647)	deleterious(0.03)	deleterious(0.592)	NULL
TTC16	158248	genome.wustl.edu	37	9	130493005	130493005	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144965.1	+1	provisional	p.S648L	0.252	23	0%	20	35%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
SH2D3C	10044	genome.wustl.edu	37	9	130507372	130507372	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170600.2	-1	validated	p.R424H	0.989	4	0.000	11	0.636	3	0%	possibly_damaging(0.818)	tolerated(0.09)	deleterious(0.605)	NULL
ENG	2022	genome.wustl.edu	37	9	130587536	130587536	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114753.1	-1	reviewed	p.D264N	0.009	9	0.000	12	0.500	42	23.8%	benign(0.108)	tolerated(0.08)	neutral(0.308)	NULL
FAM102A	399665	genome.wustl.edu	37	9	130707118	130707118	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001035254.2	-1	validated	p.A326V	1.000	19	0%	16	43.8%	31	54.8%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
SLC25A25	114789	genome.wustl.edu	37	9	130868436	130868436	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006641.1	+1	validated	p.R303H	0.997	156	0%	98	41.8%	11	36.3%	possibly_damaging(0.768)	deleterious(0.01)	deleterious(0.691)	superfamily_Mitoch_carrier,HMMPfam_Mito_carr
CIZ1	25792	genome.wustl.edu	37	9	130941263	130941263	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001131016.1	-1	validated	p.Q408R	0.957	43	0%	42	40.5%	57	31.5%	unknown(0)	tolerated(0.06)	-	NULL
GOLGA2	2801	genome.wustl.edu	37	9	131019756	131019756	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004486.4	-1	reviewed	p.R896C	0.980	23	0%	43	44.2%	67	29.8%	unknown(0)	deleterious(0.02)	-	NULL
GOLGA2	2801	genome.wustl.edu	37	9	131024934	131024934	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004486.4	-1	reviewed	p.L321F	0.014	181	0%	104	37.5%	49	34.6%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
SLC27A4	10999	genome.wustl.edu	37	9	131110941	131110941	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005094.3	+1	reviewed	p.A225D	1.000	14	0%	26	57.7%	18	27.7%	benign(0.358)	deleterious(0)	deleterious(0.558)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
URM1	81605	genome.wustl.edu	37	9	131140350	131140350	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135947.1	+1	validated	p.K24T	1.000	125	0%	98	40.8%	46	39.1%	possibly_damaging(0.736)	tolerated(0.06)	deleterious(0.592)	HMMPfam_Urm1
CERCAM	51148	genome.wustl.edu	37	9	131191109	131191109	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016174.4	+1	validated	p.D320	1.000	14	0%	18	77.8%	29	31%	-	-	-	HMMPfam_Glyco_transf_25
SPTAN1	6709	genome.wustl.edu	37	9	131344834	131344834	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130438.1	+1	validated	p.A550D	1.000	183	0%	118	43.2%	53	45.2%	possibly_damaging(0.586)	tolerated(0.37)	neutral(0.221)	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
LRRC8A	56262	genome.wustl.edu	37	9	131669935	131669935	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127244.1	+1	reviewed	p.F164	0.975	24	0%	24	54.2%	22	59%	-	-	-	NULL
PHYHD1	254295	genome.wustl.edu	37	9	131704001	131704001	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174933.3	+1	validated	p.R288H	0.000	22	0%	25	36%	66	66.6%	probably_damaging(0.986)	-	-	NULL
DOLK	22845	genome.wustl.edu	37	9	131708119	131708119	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014908.3	-1	reviewed	p.A488	0.716	96	0%	67	46.3%	20	65%	-	-	-	NULL
NUP188	23511	genome.wustl.edu	37	9	131742955	131742955	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015354.1	+1	validated	p.L447H	1.000	91	0%	58	31%	20	55%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Nup188
NUP188	23511	genome.wustl.edu	37	9	131745254	131745254	+	Silent	SNP	G	G	A	rs148151804	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015354.1	+1	validated	p.S581	0.021	32	0%	21	38.1%	37	48.6%	-	-	-	HMMPfam_Nup188
SH3GLB2	56904	genome.wustl.edu	37	9	131772121	131772121	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020145.2	-1	provisional	p.F256	0.951	19	0%	21	52.4%	95	48.4%	-	-	-	HMMPfam_BAR,HMMSmart_SM00721
CRAT	1384	genome.wustl.edu	37	9	131860304	131860304	+	Missense_Mutation	SNP	G	G	T	rs113981850	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000755.3	-1	reviewed	p.D484E	0.774	15	0%	25	40%	100	45%	benign(0.006)	tolerated(0.21)	neutral(0.044)	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases
METTL11A	28989	genome.wustl.edu	37	9	132394988	132394988	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014064.2	+1	validated	p.T2	0.923	71	1.4%	63	30.2%	46	47.8%	-	-	-	NULL
ASB6	140459	genome.wustl.edu	37	9	132400904	132400904	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177999.1	-1	reviewed	p.A146V	0.991	37	0%	41	46.3%	24	62.5%	unknown(0)	tolerated(0.18)	-	superfamily_ANK
USP20	10868	genome.wustl.edu	37	9	132630483	132630483	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008563.3	+1	validated	p.G297E	1.000	23	0%	28	60.7%	18	50%	benign(0.11)	deleterious(0.02)	neutral(0.392)	HMMPfam_UCH,superfamily_SSF54001
ASS1	445	genome.wustl.edu	37	9	133329718	133329718	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000050.4	+1	reviewed	p.F44	0.985	49	0%	34	35.3%	55	60%	-	-	-	HMMPfam_Arginosuc_synth,superfamily_Adenine nucleotide alpha hydrolases-like
EXOSC2	23404	genome.wustl.edu	37	9	133573555	133573555	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014285.5	+1	validated	p.Q93*	1.000	53	0%	45	42.2%	18	22.2%	-	-	-	NULL
ABL1	25	genome.wustl.edu	37	9	133738347	133738347	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007313.2	+1	reviewed	p.G268	0.082	24	0%	32	43.8%	38	55.2%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,superfamily_SH2 domain
ABL1	25	genome.wustl.edu	37	9	133748251	133748251	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007313.2	+1	reviewed	p.V323	0.999	33	0%	39	48.7%	25	44%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
LAMC3	10319	genome.wustl.edu	37	9	133907471	133907471	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006059.3	+1	reviewed	p.R240W	1.000	72	1.4%	80	33.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Laminin_N,HMMSmart_LamNT
NUP214	8021	genome.wustl.edu	37	9	134025743	134025743	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005085.2	+1	reviewed	p.K691N	1.000	250	0%	126	50%	9	22.2%	probably_damaging(0.998)	tolerated(0.26)	deleterious(0.508)	NULL
FAM78A	286336	genome.wustl.edu	37	9	134136426	134136426	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033387.3	-1	validated	p.R212H	1.000	27	0%	24	45.8%	7	14.2%	benign(0.081)	deleterious(0.01)	neutral(0.412)	NULL
PRRC2B	84726	genome.wustl.edu	37	9	134343118	134343118	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013318.3	+1	validated	p.R630H	1.000	56	0%	33	51.5%	45	44.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
POMT1	10585	genome.wustl.edu	37	9	134394258	134394258	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007171.3	+1	reviewed	p.R489Q	1.000	14	0%	16	68.8%	27	44.4%	benign(0.04)	tolerated(0.27)	neutral(0.036)	HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMSmart_SM00472
POMT1	10585	genome.wustl.edu	37	9	134394819	134394819	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007171.3	+1	reviewed	p.A532	0.000	23	0%	18	66.7%	49	36.7%	-	-	-	NULL
POMT1	10585	genome.wustl.edu	37	9	134396774	134396774	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007171.3	+1	reviewed	p.S602	0.027	64	0%	66	47%	63	41.2%	-	-	-	NULL
POMT1	10585	genome.wustl.edu	37	9	134397598	134397598	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007171.3	+1	reviewed	p.D686N	0.937	34	0%	40	25%	44	29.5%	benign(0.174)	tolerated(0.45)	neutral(0.028)	NULL
UCK1	83549	genome.wustl.edu	37	9	134400542	134400542	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031432.2	-1	validated	p.R240Q	1.000	16	0%	22	54.5%	51	41.1%	possibly_damaging(0.938)	tolerated(0.21)	neutral(0.427)	NULL
RAPGEF1	2889	genome.wustl.edu	37	9	134465325	134465325	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198679.1	-1	reviewed	p.R771C	1.000	55	0%	53	54.7%	20	45%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_RasGEF_N,HMMSmart_RasGEFN,superfamily_Ras_GEF
RAPGEF1	2889	genome.wustl.edu	37	9	134501638	134501638	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198679.1	-1	reviewed	p.D459A	0.985	16	0%	15	60%	38	55.2%	benign(0.006)	deleterious(0.01)	neutral(0.406)	NULL
MED27	9442	genome.wustl.edu	37	9	134738469	134738469	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004269.2	-1	reviewed	p.V261G	0.998	45	0%	41	43.9%	39	38.4%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
SETX	23064	genome.wustl.edu	37	9	135163702	135163702	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015046.5	-1	reviewed	p.K2082T	0.189	57	0%	34	47.1%	13	53.8%	benign(0.223)	deleterious(0.04)	neutral(0.371)	superfamily_P-loop containing nucleoside triphosphate hydrolases
SETX	23064	genome.wustl.edu	37	9	135202512	135202512	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015046.5	-1	reviewed	p.A1491	0.358	288	0%	177	41.2%	5	40%	-	-	-	NULL
DDX31	64794	genome.wustl.edu	37	9	135538068	135538068	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022779.7	-1	reviewed	p.T135	0.999	148	0%	95	45.3%	5	60%	-	-	-	NULL
TSC1	7248	genome.wustl.edu	37	9	135771902	135771902	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000368.4	-1	reviewed	p.A1072V	0.951	42	0%	24	29.2%	3	33.3%	benign(0.004)	tolerated(0.11)	neutral(0.272)	NULL
TSC1	7248	genome.wustl.edu	37	9	135781106	135781106	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000368.4	-1	reviewed	p.V620A	1.000	215	0%	143	47.6%	8	37.5%	probably_damaging(0.964)	deleterious(0.01)	deleterious(0.812)	HMMPfam_Hamartin
RALGDS	5900	genome.wustl.edu	37	9	135983428	135983428	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006266.2	-1	validated	p.L382I	0.962	25	0%	18	50%	42	47.6%	benign(0.025)	tolerated(0.25)	neutral(0.038)	HMMSmart_SM00147,superfamily_Ras GEF
GBGT1	26301	genome.wustl.edu	37	9	136029136	136029136	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021996.4	-1	validated	p.I291S	0.947	35	0%	26	26.9%	2	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Glyco_transf_6,superfamily_Nucleotide-diphospho-sugar transferases
GBGT1	26301	genome.wustl.edu	37	9	136029334	136029334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021996.4	-1	validated	p.A225V	1.000	29	0%	15	40%	1	0%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_Glyco_transf_6,superfamily_Nucleotide-diphospho-sugar transferases
GBGT1	26301	genome.wustl.edu	37	9	136030664	136030664	+	Missense_Mutation	SNP	G	G	A	rs185276552	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021996.4	-1	validated	p.A87V	0.999	38	0%	43	48.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glyco_transf_6,superfamily_Nucleotide-diphospho-sugar transferases
SURF1	6834	genome.wustl.edu	37	9	136219405	136219405	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003172.2	-1	reviewed	p.F216S	1.000	168	0%	145	40%	83	46.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SURF1
SURF2	6835	genome.wustl.edu	37	9	136227231	136227231	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017503.3	+1	reviewed	p.K203T	0.000	96	0%	97	36.1%	68	33.8%	benign(0.31)	tolerated(0.11)	neutral(0.368)	HMMPfam_SURF2
C9orf96	169436	genome.wustl.edu	37	9	136265581	136265581	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153710.3	+1	validated	p.T374	0.000	18	0%	25	48%	0	-	-	-	-	superfamily_ARM repeat
REXO4	57109	genome.wustl.edu	37	9	136278002	136278002	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020385.2	-1	validated	p.I204	0.979	30	0%	38	55.3%	33	36.3%	-	-	-	NULL
ADAMTS13	11093	genome.wustl.edu	37	9	136279647	136279647	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024514.1	+1	reviewed	NULL	0.002	23	0%	32	40.6%	0	-	-	-	-	-
ADAMTS13	11093	genome.wustl.edu	37	9	136305609	136305609	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139025.3	+1	reviewed	p.R644H	0.006	10	0%	12	33.3%	5	40%	benign(0.04)	tolerated(0.58)	neutral(0.007)	NULL
ADAMTS13	11093	genome.wustl.edu	37	9	136319686	136319686	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139025.3	+1	reviewed	p.V1065A	0.710	9	0.000	8	0.625	7	57.1%	possibly_damaging(0.952)	tolerated(0.48)	neutral(0.406)	HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ADAMTS13	11093	genome.wustl.edu	37	9	136324375	136324375	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024514.1	+1	reviewed	NULL	0.000	19	0%	21	47.6%	4	50%	-	-	-	-
ADAMTS13	11093	genome.wustl.edu	37	9	136324376	136324376	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024514.1	+1	reviewed	NULL	0.000	19	0%	20	40%	4	50%	-	-	-	-
ADAMTS13	11093	genome.wustl.edu	37	9	136324417	136324417	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024514.1	+1	reviewed	NULL	0.001	31	0%	14	35.7%	4	50%	-	-	-	-
SLC2A6	11182	genome.wustl.edu	37	9	136337276	136337276	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017585.3	-1	validated	p.P464H	1.000	17	0%	26	46.2%	7	71.4%	probably_damaging(0.978)	deleterious(0.02)	deleterious(0.803)	HMMPfam_Sugar_tr,superfamily_MFS_gen_substrate_transporter
SLC2A6	11182	genome.wustl.edu	37	9	136337294	136337294	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017585.3	-1	validated	p.T458I	0.541	14	0%	21	42.9%	7	42.8%	benign(0.001)	tolerated(0.18)	neutral(0.056)	HMMPfam_Sugar_tr,superfamily_MFS_gen_substrate_transporter
ADAMTSL2	9719	genome.wustl.edu	37	9	136405800	136405800	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145320.1	+1	reviewed	p.A165T	1.000	17	0%	19	31.6%	2	0%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	NULL
DBH	1621	genome.wustl.edu	37	9	136512976	136512976	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000787.3	+1	reviewed	p.D345N	1.000	35	0%	29	48.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_PHM_PNGase_F
BRD3	8019	genome.wustl.edu	37	9	136901162	136901162	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007371.3	-1	reviewed	p.K643R	1.000	120	0%	103	12.6%	20	25%	benign(0.313)	deleterious(0.01)	deleterious(0.503)	NULL
BRD3	8019	genome.wustl.edu	37	9	136901431	136901431	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007371.3	-1	reviewed	p.G553	0.725	27	0%	26	57.7%	25	32%	-	-	-	NULL
BRD3	8019	genome.wustl.edu	37	9	136915687	136915687	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007371.3	-1	reviewed	p.S175P	1.000	18	0%	10	50%	25	40%	possibly_damaging(0.902)	tolerated(0.17)	neutral(0.416)	NULL
WDR5	11091	genome.wustl.edu	37	9	137005034	137005034	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017588.2	+1	reviewed	p.A12G	0.985	10	0.000	8	0.625	32	50%	unknown(0)	tolerated(0.44)	-	NULL
COL5A1	1289	genome.wustl.edu	37	9	137697008	137697008	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000093.3	+1	reviewed	p.G1069V	1.000	32	0%	39	38.5%	10	0%	unknown(0)	deleterious(0)	-	HMMPfam_Collagen
COL5A1	1289	genome.wustl.edu	37	9	137701073	137701073	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000093.3	+1	reviewed	p.Q1137	0.997	17	0%	15	46.7%	5	0%	-	-	-	HMMPfam_Collagen
FCN2	2220	genome.wustl.edu	37	9	137777084	137777084	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004108.2	+1	reviewed	e5-1	0.170	8	0.000	29	0.448	0	-	-	-	-	-
PPP1R26	9858	genome.wustl.edu	37	9	138376709	138376709	+	Missense_Mutation	SNP	C	C	T	rs188912013	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014811.3	+1	validated	p.P118L	0.176	9	0.000	10	0.600	12	50%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
PPP1R26	9858	genome.wustl.edu	37	9	138377845	138377845	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014811.3	+1	validated	p.A497T	0.000	13	0%	12	33.3%	19	31.5%	possibly_damaging(0.915)	tolerated(0.06)	deleterious(0.689)	NULL
MRPS2	51116	genome.wustl.edu	37	9	138393782	138393782	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016034.3	+1	reviewed	p.R88*	0.998	67	0%	54	46.3%	86	44.1%	-	-	-	HMMPfam_Ribosomal_S2,superfamily_Ribosomal_S2,PatternScan_RIBOSOMAL_S2_1
GLT6D1	360203	genome.wustl.edu	37	9	138516374	138516374	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182974.2	-1	provisional	p.A134S	0.000	29	0%	20	50%	0	-	benign(0.221)	deleterious(0.05)	neutral(0.367)	HMMPfam_Glyco_transf_6,superfamily_SSF53448
KCNT1	57582	genome.wustl.edu	37	9	138676681	138676681	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020822.2	+1	validated	p.A1034	0.021	10	0%	11	63.6%	0	-	-	-	-	NULL
CAMSAP1	157922	genome.wustl.edu	37	9	138713672	138713672	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015447.3	-1	validated	p.E945D	0.999	29	0%	28	39.3%	16	50%	benign(0.007)	tolerated(0.31)	neutral(0.027)	NULL
CAMSAP1	157922	genome.wustl.edu	37	9	138714466	138714466	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015447.3	-1	validated	p.G681W	0.003	39	0%	36	44.4%	4	50%	possibly_damaging(0.899)	deleterious(0.02)	deleterious(0.739)	NULL
UBAC1	10422	genome.wustl.edu	37	9	138830184	138830184	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016172.2	-1	validated	p.R329Q	1.000	22	0%	20	30%	37	10.8%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_UBA_like
CARD9	64170	genome.wustl.edu	37	9	139258819	139258819	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052813.4	-1	reviewed	p.R516W	0.049	10	0%	25	44%	5	40%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
SNAPC4	6621	genome.wustl.edu	37	9	139289777	139289777	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003086.2	-1	validated	p.P148	0.890	56	0%	38	44.7%	8	50%	-	-	-	NULL
SDCCAG3	10807	genome.wustl.edu	37	9	139300404	139300404	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039707.1	-1	validated	p.R282S	1.000	229	0%	142	44.4%	13	23%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
SDCCAG3	10807	genome.wustl.edu	37	9	139301843	139301843	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039707.1	-1	validated	p.S191	0.000	8	0.000	14	0.357	48	39.5%	-	-	-	NULL
SEC16A	9919	genome.wustl.edu	37	9	139353673	139353673	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014866.1	-1	validated	p.F1774	0.995	100	0%	69	50.7%	39	76.9%	-	-	-	NULL
SEC16A	9919	genome.wustl.edu	37	9	139368647	139368647	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014866.1	-1	validated	p.P1141S	0.995	14	0%	20	25%	25	68%	probably_damaging(0.994)	tolerated(0.17)	deleterious(0.511)	NULL
SEC16A	9919	genome.wustl.edu	37	9	139371122	139371122	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014866.1	-1	validated	p.E316*	0.091	15	0%	19	36.8%	20	20%	-	-	-	NULL
LCN6	158062	genome.wustl.edu	37	9	139641983	139641983	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198946.2	-1	validated	p.A41	0.979	27	0%	14	50%	0	-	-	-	-	superfamily_Calycin
C9orf86	55684	genome.wustl.edu	37	9	139733778	139733778	+	Missense_Mutation	SNP	G	G	A	rs191432837	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024718.4	+1	validated	p.R533H	0.000	17	0%	17	35.3%	144	43.7%	benign(0.064)	tolerated(0.15)	neutral(0.245)	NULL
PHPT1	29085	genome.wustl.edu	37	9	139745229	139745229	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014172.4	+1	validated	p.A103V	0.984	40	0%	31	25.8%	334	46.1%	benign(0.083)	tolerated(0.1)	neutral(0.292)	HMMPfam_Ocnus
PTGDS	5730	genome.wustl.edu	37	9	139873550	139873550	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000954.5	+1	reviewed	p.D74N	0.000	12	0%	16	68.8%	70	11.4%	possibly_damaging(0.83)	deleterious(0.01)	deleterious(0.721)	HMMPfam_Lipocalin,superfamily_Lipocalins
ABCA2	20	genome.wustl.edu	37	9	139911420	139911420	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_212533.2	-1	reviewed	p.A934T	0.982	5	0.000	7	0.571	26	57.6%	benign(0)	tolerated(0.58)	neutral(0.005)	NULL
GRIN1	2902	genome.wustl.edu	37	9	140055594	140055594	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007327.3	+1	reviewed	p.G428	0.985	9	0.000	28	0.393	0	-	-	-	-	superfamily_Periplasmic binding protein-like II
GRIN1	2902	genome.wustl.edu	37	9	140058087	140058087	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007327.3	+1	reviewed	p.A804T	1.000	23	0%	17	58.8%	1	100%	benign(0)	tolerated(0.69)	neutral(0.002)	HMMPfam_Lig_chan
RNF208	727800	genome.wustl.edu	37	9	140114925	140114925	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031297.3	-1	validated	p.C247Y	1.000	10	0%	13	69.2%	51	35.2%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
FAM166A	401565	genome.wustl.edu	37	9	140139660	140139660	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001710.1	-1	predicted	p.C178Y	0.051	15	0%	13	46.2%	0	-	benign(0)	tolerated(0.22)	neutral(0.042)	NULL
FAM166A	401565	genome.wustl.edu	37	9	140139957	140139957	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001710.1	-1	predicted	p.E108	0.000	37	0%	43	46.5%	0	-	-	-	-	NULL
C9orf173	441476	genome.wustl.edu	37	9	140146280	140146280	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004353.2	+1	validated	p.G67	0.000	15	0%	25	40%	0	-	-	-	-	NULL
NELF	26012	genome.wustl.edu	37	9	140347304	140347304	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371482	-1	known	p.L3	0.000	30	0%	22	45.5%	3	66.6%	-	-	-	NULL
NELF	26012	genome.wustl.edu	37	9	140349730	140349730	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130969.1	-1	reviewed	p.R247H	1.000	9	0.000	12	0.333	34	29.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PNPLA7	375775	genome.wustl.edu	37	9	140357194	140357194	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098537.1	-1	validated	p.A1145	0.032	41	0%	33	48.5%	9	33.3%	-	-	-	superfamily_FabD/lysophospholipase-like
PNPLA7	375775	genome.wustl.edu	37	9	140409961	140409961	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098537.1	-1	validated	p.G365	0.000	8	0.000	10	0.500	1	100%	-	-	-	NULL
PNPLA7	375775	genome.wustl.edu	37	9	140417302	140417302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098537.1	-1	validated	p.A252V	0.684	12	0%	32	37.5%	3	0%	benign(0.018)	tolerated(0.08)	neutral(0.300)	HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like
PNPLA7	375775	genome.wustl.edu	37	9	140437117	140437117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098537.1	-1	validated	p.L215M	1.000	10	0%	10	40%	3	100%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like
PNPLA7	375775	genome.wustl.edu	37	9	140437885	140437885	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098537.1	-1	validated	p.R169W	0.926	19	0%	23	43.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_cAMP-binding domain-like
WDR85	92715	genome.wustl.edu	37	9	140459602	140459602	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138778.2	-1	provisional	p.G215	0.302	64	0%	57	42.1%	26	53.8%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40
EHMT1	79813	genome.wustl.edu	37	9	140611329	140611329	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000460843	+1	known	p.D113N	0.985	28	0%	22	36.4%	26	53.8%	possibly_damaging(0.604)	tolerated(0.28)	neutral(0.241)	NULL
CACNA1B	774	genome.wustl.edu	37	9	140865931	140865931	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000718.2	+1	validated	p.R477H	1.000	85	0%	100	14%	0	-	probably_damaging(0.997)	tolerated(0.44)	deleterious(0.479)	superfamily_Voltage-gated potassium channels
CACNA1B	774	genome.wustl.edu	37	9	140870442	140870442	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000718.2	+1	validated	p.R543W	1.000	122	0%	89	51.7%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1B	774	genome.wustl.edu	37	9	140952691	140952691	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000718.2	+1	validated	p.E1433K	1.000	248	0%	212	43.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CACNA1B	774	genome.wustl.edu	37	9	140995636	140995636	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371365	+1	known	p.R132H	1.000	14	0.000	7	0.571	0	-	benign(0)	tolerated(1)	-	NULL
CACNA1B	774	genome.wustl.edu	37	9	141006957	141006957	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000718.2	+1	validated	p.P1846S	1.000	38	0%	30	33.3%	0	-	benign(0.001)	tolerated(1)	-	HMMPfam_Ca_chan_IQ
TUBB8	347688	genome.wustl.edu	37	10	93846	93846	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177987.2	-1	validated	p.R162	1.000	52	0%	44	18.2%	0	-	-	-	-	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ
DIP2C	22982	genome.wustl.edu	37	10	436284	436284	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014974.2	-1	reviewed	p.E472*	1.000	86	0%	36	72.2%	1	100%	-	-	-	HMMPfam_AMP-binding,superfamily_SSF56801
LARP4B	23185	genome.wustl.edu	37	10	875433	875433	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015155.1	-1	provisional	p.T339	0.034	65	0%	18	66.7%	13	92.3%	-	-	-	NULL
LARP4B	23185	genome.wustl.edu	37	10	909814	909814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015155.1	-1	provisional	p.A100D	0.999	73	0%	33	54.5%	16	100%	possibly_damaging(0.604)	tolerated(0.61)	neutral(0.213)	NULL
GTPBP4	23560	genome.wustl.edu	37	10	1052999	1052999	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012341.2	+1	reviewed	p.M348I	1.000	229	0%	111	74.8%	13	100%	benign(0.008)	tolerated(0.2)	neutral(0.049)	NULL
KLF6	1316	genome.wustl.edu	37	10	3824115	3824115	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001300.5	-1	reviewed	p.E132K	0.570	70	0%	29	72.4%	12	66.6%	benign(0.156)	tolerated(0.69)	neutral(0.016)	NULL
AKR1C1	1645	genome.wustl.edu	37	10	5014843	5014843	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001353.5	+1	reviewed	p.R250*	0.067	65	0%	33	27.3%	0	-	-	-	-	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red
AKR1CL1	340811	genome.wustl.edu	37	10	5204843	5204843	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380510	-1	known	p.K78	0.961	246	0%	59	66.1%	0	-	-	-	-	HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase
AKR1C4	1109	genome.wustl.edu	37	10	5242198	5242198	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001818.2	+1	reviewed	p.R47C	1.000	161	0%	32	50%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase,PatternScan_ALDOKETO_REDUCTASE_1
UCN3	114131	genome.wustl.edu	37	10	5415744	5415744	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053049.2	+1	reviewed	p.G21C	0.027	17	0%	17	76.5%	0	-	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	NULL
TUBAL3	79861	genome.wustl.edu	37	10	5435510	5435510	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024803.2	-1	validated	p.R437	1.000	58	0%	39	82.1%	0	-	-	-	-	superfamily_Tubulin C-terminal domain-like
NET1	10276	genome.wustl.edu	37	10	5498747	5498747	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001047160.1	+1	validated	p.P527	0.000	21	0%	20	25%	41	39%	-	-	-	NULL
GDI2	2665	genome.wustl.edu	37	10	5810196	5810196	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001494.3	-1	reviewed	p.N324S	1.000	267	0%	113	23.9%	77	19.4%	benign(0)	tolerated(0.86)	neutral(0.001)	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain,superfamily_FAD-linked reductases C-terminal domain
FBXO18	84893	genome.wustl.edu	37	10	5979174	5979174	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379994	+1	known	p.R391C	0.001	20	0%	10	70%	46	89.1%	unknown(0)	deleterious(0)	-	NULL
IL2RA	3559	genome.wustl.edu	37	10	6060053	6060053	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000417.2	-1	reviewed	p.V253I	0.350	46	0%	26	30.8%	3	0%	unknown(0)	-	-	NULL
IL2RA	3559	genome.wustl.edu	37	10	6063598	6063598	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000417.2	-1	reviewed	p.F142	0.706	119	0%	87	44.8%	2	0%	-	-	-	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
PRKCQ	5588	genome.wustl.edu	37	10	6553151	6553151	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006257.2	-1	reviewed	p.G42R	1.000	134	0%	75	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SFMBT2	57713	genome.wustl.edu	37	10	7327814	7327814	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000379713	-1	known	p.V180A	0.001	131	0%	100	42%	0	-	benign(0.016)	tolerated(0.05)	neutral(0.346)	NULL
ATP5C1	509	genome.wustl.edu	37	10	7844303	7844303	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001973.1	+1	reviewed	p.N236	1.000	113	0%	61	42.6%	403	49.3%	-	-	-	HMMPfam_ATP-synt,superfamily_ATP synthase (F1-ATPase) gamma subunit
TAF3	83860	genome.wustl.edu	37	10	8056704	8056704	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031923.2	+1	provisional	p.R927Q	1.000	83	0%	78	52.6%	10	50%	unknown(0)	tolerated(0.05)	-	NULL
CELF2	10659	genome.wustl.edu	37	10	11047376	11047376	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025077.2	+1	reviewed	p.T9I	1.000	635	0%	317	41%	0	-	possibly_damaging(0.604)	deleterious(0.01)	deleterious(0.615)	superfamily_RNA-binding domain RBD
CELF2	10659	genome.wustl.edu	37	10	11363154	11363154	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006561.3	+1	reviewed	p.A367T	1.000	342	0%	213	39%	0	-	unknown(0)	tolerated(0.34)	-	NULL
DHTKD1	55526	genome.wustl.edu	37	10	12162870	12162870	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018706.5	+1	validated	p.A915T	0.873	104	0%	68	50%	15	26.6%	benign(0)	tolerated(0.62)	neutral(0.004)	NULL
CAMK1D	57118	genome.wustl.edu	37	10	12833208	12833208	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153498.2	+1	reviewed	p.S206F	1.000	255	0.4%	152	46.1%	11	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CAMK1D	57118	genome.wustl.edu	37	10	12870787	12870787	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153498.2	+1	reviewed	p.L353	1.000	40	0%	33	45.5%	5	40%	-	-	-	NULL
CCDC3	83643	genome.wustl.edu	37	10	12940571	12940571	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031455.3	-1	validated	p.R220*	0.999	14	0%	28	46.4%	8	0%	-	-	-	NULL
UCMA	221044	genome.wustl.edu	37	10	13275783	13275783	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145314.1	-1	provisional	p.S26R	0.000	41	0%	30	46.7%	0	-	possibly_damaging(0.688)	tolerated(0.11)	deleterious(0.518)	NULL
UCMA	221044	genome.wustl.edu	37	10	13276248	13276248	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145314.1	-1	provisional	p.R4K	1.000	12	0%	16	37.5%	0	-	benign(0)	tolerated(1)	-	NULL
LOC100287471	100287471	genome.wustl.edu	37	10	13350291	13350291	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002342961.1	-1	model	p.A53T	0.367	19	0.000	8	0.500	0	-	probably_damaging(0.955)	deleterious(0)	deleterious(0.843)	NULL
SEPHS1	22929	genome.wustl.edu	37	10	13370445	13370445	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012247.3	-1	reviewed	p.E219D	0.997	166	0%	99	34.3%	73	42.4%	benign(0)	tolerated(0.33)	neutral(0.024)	HMMPfam_AIRS_C,superfamily_PurM C-terminal domain-like
BEND7	222389	genome.wustl.edu	37	10	13534657	13534657	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152751.2	-1	validated	p.S212N	0.593	62	0%	37	40.5%	5	60%	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
BEND7	222389	genome.wustl.edu	37	10	13541788	13541788	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152751.2	-1	validated	p.T94	0.000	98	0%	87	41.4%	1	100%	-	-	-	NULL
MEIG1	644890	genome.wustl.edu	37	10	15008564	15008564	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080836.2	+1	validated	p.R33W	1.000	175	0%	71	39.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
OLAH	55301	genome.wustl.edu	37	10	15098898	15098898	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018324.2	+1	validated	p.P80L	0.009	496	0%	273	43.6%	0	-	probably_damaging(0.994)	-	-	HMMPfam_Thioesterase
C10orf111	221060	genome.wustl.edu	37	10	15138392	15138392	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153244.1	-1	predicted	p.L144	0.001	113	0%	89	40.4%	0	-	-	-	-	NULL
FAM171A1	221061	genome.wustl.edu	37	10	15256372	15256372	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010924.1	-1	validated	p.G405	0.000	21	0%	28	53.6%	14	42.8%	-	-	-	HMMPfam_UPF0560
FAM171A1	221061	genome.wustl.edu	37	10	15290670	15290670	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010924.1	-1	validated	p.Y241C	1.000	21	0%	12	33.3%	28	53.5%	possibly_damaging(0.952)	tolerated(0.19)	neutral(0.445)	HMMPfam_UPF0560
FAM171A1	221061	genome.wustl.edu	37	10	15325920	15325920	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010924.1	-1	validated	p.A94	0.998	62	0%	34	55.9%	12	58.3%	-	-	-	HMMPfam_UPF0560
CUBN	8029	genome.wustl.edu	37	10	16870890	16870890	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081.3	-1	reviewed	p.D3560N	0.996	83	0%	52	48.1%	2	0%	probably_damaging(0.99)	tolerated(0.64)	neutral(0.445)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CUBN	8029	genome.wustl.edu	37	10	16882951	16882951	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081.3	-1	reviewed	p.T3253	0.650	305	0%	103	43.7%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CUBN	8029	genome.wustl.edu	37	10	17130302	17130302	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081.3	-1	reviewed	p.S603Y	1.000	150	0%	67	49.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
VIM	7431	genome.wustl.edu	37	10	17271804	17271804	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003380.3	+1	reviewed	p.N128T	1.000	5	0.000	14	0.571	987	41.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Filament
VIM	7431	genome.wustl.edu	37	10	17275610	17275610	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003380.3	+1	reviewed	p.R217C	1.000	92	0%	45	46.7%	1030	39.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Filament
ST8SIA6	338596	genome.wustl.edu	37	10	17432600	17432600	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004470.1	-1	validated	p.S74P	0.146	225	0%	132	39.4%	1	100%	benign(0.139)	deleterious(0.02)	neutral(0.395)	NULL
STAM	8027	genome.wustl.edu	37	10	17746459	17746459	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003473.2	+1	reviewed	p.L314	0.992	213	0%	113	35.4%	7	14.2%	-	-	-	NULL
CACNB2	783	genome.wustl.edu	37	10	18789754	18789754	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201596.2	+1	reviewed	p.D157A	1.000	60	0%	34	23.5%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
NSUN6	221078	genome.wustl.edu	37	10	18898830	18898830	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182543.2	-1	validated	p.P201S	1.000	194	0%	76	43.4%	8	37.5%	possibly_damaging(0.616)	tolerated(0.33)	neutral(0.238)	HMMPfam_PUA,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
PLXDC2	84898	genome.wustl.edu	37	10	20466340	20466340	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032812.7	+1	provisional	e9+2	1.000	202	0%	59	13.6%	0	-	-	-	-	-
NEBL	10529	genome.wustl.edu	37	10	21157619	21157619	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006393.2	-1	reviewed	p.V220M	0.992	358	0%	98	36.7%	0	-	benign(0.002)	tolerated(0.09)	neutral(0.296)	HMMPfam_Nebulin,HMMSmart_SM00227
NEBL	10529	genome.wustl.edu	37	10	21158710	21158710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006393.2	-1	reviewed	p.D181Y	1.000	254	0%	78	52.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00227
C10orf140	387640	genome.wustl.edu	37	10	21804152	21804152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207371.3	-1	validated	p.A867V	1.000	142	0%	111	49.5%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
MLLT10	8028	genome.wustl.edu	37	10	21884330	21884330	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004641.2	+1	validated	p.P122	0.999	354	0%	184	37%	3	66.6%	-	-	-	NULL
MLLT10	8028	genome.wustl.edu	37	10	22021994	22021994	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004641.2	+1	validated	p.I811M	0.000	274	0%	126	34.9%	8	50%	benign(0)	tolerated(0.15)	neutral(0.241)	NULL
DNAJC1	64215	genome.wustl.edu	37	10	22209855	22209855	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022365.3	-1	provisional	p.R137*	1.000	154	0%	72	41.7%	10	0%	-	-	-	superfamily_DnaJ_N
BMI1	648	genome.wustl.edu	37	10	22615489	22615489	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005180.6	+1	validated	p.S37	1.000	191	0%	135	42.2%	21	47.6%	-	-	-	HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box
BMI1	648	genome.wustl.edu	37	10	22618327	22618327	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005180.6	+1	validated	p.V279	0.976	211	0%	146	41.8%	44	34%	-	-	-	NULL
ARMC3	219681	genome.wustl.edu	37	10	23257235	23257235	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173081.3	+1	validated	p.E245*	1.000	168	0%	56	35.7%	1	0%	-	-	-	HMMSmart_SM00185,superfamily_ARM repeat
C10orf67	256815	genome.wustl.edu	37	10	23633657	23633657	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153714.2	-1	validated	p.V17D	0.000	25	0%	20	55%	0	-	unknown(0)	-	-	NULL
ARHGAP21	57584	genome.wustl.edu	37	10	24874990	24874990	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020824.3	-1	validated	p.V1410L	0.682	106	0%	35	57.1%	20	40%	probably_damaging(0.967)	deleterious(0.04)	deleterious(0.758)	NULL
ARHGAP21	57584	genome.wustl.edu	37	10	24880906	24880906	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418033	-1	known	p.H118N	0.742	187	0%	95	13.7%	25	16%	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ARHGAP21	57584	genome.wustl.edu	37	10	24908805	24908805	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020824.3	-1	validated	p.P673	0.000	173	0.6%	78	28.2%	15	40%	-	-	-	NULL
ARHGAP21	57584	genome.wustl.edu	37	10	24909568	24909568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020824.3	-1	validated	p.S419F	0.995	213	0%	100	43%	13	23%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
PRTFDC1	56952	genome.wustl.edu	37	10	25231294	25231294	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020200.5	-1	provisional	p.E40	0.000	205	0%	96	15.6%	18	11.1%	-	-	-	HMMPfam_Pribosyltran,superfamily_PRTase-like
THNSL1	79896	genome.wustl.edu	37	10	25313735	25313735	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024838.4	+1	validated	p.R528Q	1.000	109	0%	52	38.5%	1	100%	probably_damaging(0.999)	tolerated(0.22)	deleterious(0.532)	HMMPfam_PALP,superfamily_Tryptophan synthase beta subunit-like PLP-dependent enzymes
GPR158	57512	genome.wustl.edu	37	10	25701263	25701263	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020752.2	+1	validated	p.C399S	1.000	124	0%	85	42.4%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
GPR158	57512	genome.wustl.edu	37	10	25887383	25887383	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020752.2	+1	validated	p.R943I	0.009	111	0%	31	45.2%	0	-	possibly_damaging(0.856)	deleterious(0.01)	deleterious(0.736)	NULL
GPR158	57512	genome.wustl.edu	37	10	25887995	25887995	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020752.2	+1	validated	p.S1147Y	0.010	131	0%	42	45.2%	0	-	possibly_damaging(0.835)	tolerated(0.41)	neutral(0.334)	NULL
MYO3A	53904	genome.wustl.edu	37	10	26243817	26243817	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017433.4	+1	reviewed	p.E61D	1.000	211	0%	56	37.5%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MYO3A	53904	genome.wustl.edu	37	10	26285483	26285483	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017433.4	+1	reviewed	p.S123I	0.980	396	0%	108	41.7%	0	-	possibly_damaging(0.819)	tolerated(0.11)	deleterious(0.581)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MYO3A	53904	genome.wustl.edu	37	10	26315318	26315318	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017433.4	+1	reviewed	p.K270N	1.000	186	0%	88	40.9%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MYO3A	53904	genome.wustl.edu	37	10	26414347	26414347	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017433.4	+1	reviewed	p.R642W	1.000	182	0%	54	40.7%	0	-	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYO3A	53904	genome.wustl.edu	37	10	26417456	26417456	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017433.4	+1	reviewed	p.A751T	0.996	158	0.6%	52	38.5%	0	-	benign(0.007)	tolerated(0.4)	neutral(0.016)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYO3A	53904	genome.wustl.edu	37	10	26434441	26434441	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017433.4	+1	reviewed	p.G828E	1.000	330	0%	84	41.7%	0	-	probably_damaging(0.965)	deleterious(0.01)	deleterious(0.812)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYO3A	53904	genome.wustl.edu	37	10	26457725	26457725	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017433.4	+1	reviewed	p.V1066I	1.000	465	0%	141	39.7%	0	-	possibly_damaging(0.678)	tolerated(0.19)	neutral(0.291)	HMMSmart_IQ,superfamily_SSF52540
GAD2	2572	genome.wustl.edu	37	10	26518611	26518611	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000818.2	+1	reviewed	p.Y249H	1.000	131	0%	69	13%	0	-	possibly_damaging(0.887)	deleterious(0)	deleterious(0.791)	HMMPfam_Pyridoxal_deC,superfamily_PLP-dependent transferases
APBB1IP	54518	genome.wustl.edu	37	10	26800807	26800807	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019043.3	+1	validated	p.L221	0.996	118	0%	55	20%	2	0%	-	-	-	HMMPfam_RA,HMMSmart_RA
APBB1IP	54518	genome.wustl.edu	37	10	26822418	26822418	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019043.3	+1	validated	p.E288D	1.000	364	0%	123	38.2%	1	0%	benign(0.144)	tolerated(0.36)	neutral(0.033)	NULL
ABI1	10006	genome.wustl.edu	37	10	27149700	27149700	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005470.3	-1	validated	p.D31	1.000	58	0%	69	50.7%	31	54.8%	-	-	-	NULL
ANKRD26	22852	genome.wustl.edu	37	10	27324072	27324072	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014915.2	-1	validated	p.Q1103K	0.026	120	0%	70	48.6%	4	25%	possibly_damaging(0.749)	deleterious(0.03)	deleterious(0.639)	NULL
ANKRD26	22852	genome.wustl.edu	37	10	27366266	27366266	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014915.2	-1	validated	e9+1	0.962	274	0%	124	40.3%	0	-	-	-	-	-
YME1L1	10730	genome.wustl.edu	37	10	27425249	27425249	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139312.1	-1	reviewed	p.E223K	1.000	315	0%	150	45.3%	49	30.6%	benign(0.277)	tolerated(0.19)	neutral(0.079)	NULL
MASTL	84930	genome.wustl.edu	37	10	27448625	27448625	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032844.3	+1	reviewed	p.V134	0.934	196	0%	106	45.3%	9	33.3%	-	-	-	superfamily_Kinase_like,HMMPfam_Pkinase
PTCHD3	374308	genome.wustl.edu	37	10	27687822	27687822	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034842.3	-1	validated	p.P569S	0.001	224	0%	100	11%	0	-	benign(0.29)	tolerated(0.77)	neutral(0.090)	HMMPfam_Patched
LYZL1	84569	genome.wustl.edu	37	10	29599087	29599087	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032517.4	+1	validated	p.I162S	0.981	372	0%	227	46.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Lys,HMMSmart_LYZ1,superfamily_SSF53955
LYZL1	84569	genome.wustl.edu	37	10	29599959	29599959	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032517.4	+1	validated	p.E186K	0.972	181	0%	115	40.9%	0	-	benign(0.001)	tolerated(0.19)	neutral(0.050)	HMMPfam_Lys,HMMSmart_LYZ1,superfamily_SSF53955
SVIL	6840	genome.wustl.edu	37	10	29779853	29779853	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021738.2	-1	reviewed	p.E1372G	1.000	128	0%	65	15.4%	17	29.4%	benign(0.208)	deleterious(0)	neutral(0.465)	NULL
SVIL	6840	genome.wustl.edu	37	10	29812749	29812749	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021738.2	-1	reviewed	p.Q932*	1.000	262	0%	166	12.7%	22	13.6%	-	-	-	NULL
SVIL	6840	genome.wustl.edu	37	10	29812767	29812767	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021738.2	-1	reviewed	p.L926	1.000	236	0%	151	42.4%	23	34.7%	-	-	-	NULL
SVIL	6840	genome.wustl.edu	37	10	29839762	29839762	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021738.2	-1	reviewed	p.E197	0.307	43	0%	28	53.6%	28	46.4%	-	-	-	NULL
KIAA1462	57608	genome.wustl.edu	37	10	30315908	30315908	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020848.2	-1	validated	p.Q1057*	0.000	30	0%	34	50%	0	-	-	-	-	NULL
KIAA1462	57608	genome.wustl.edu	37	10	30336521	30336521	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020848.2	-1	validated	p.S74I	0.000	18	0%	13	53.8%	2	0%	benign(0.179)	tolerated(0.41)	neutral(0.032)	NULL
MTPAP	55149	genome.wustl.edu	37	10	30625940	30625940	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018109.3	-1	validated	p.N191S	0.072	118	0%	61	34.4%	13	7.6%	benign(0.022)	tolerated(0.66)	neutral(0.004)	superfamily_Nucleotidyltransferase
LYZL2	119180	genome.wustl.edu	37	10	30915092	30915092	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183058.2	-1	validated	p.F126	0.019	58	0%	37	45.9%	0	-	-	-	-	HMMPfam_Lys,HMMSmart_LYZ1,superfamily_SSF53955
ZEB1	6935	genome.wustl.edu	37	10	31810367	31810367	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030751.5	+1	reviewed	p.T702A	0.689	103	0%	42	40.5%	5	0%	benign(0)	tolerated(0.17)	neutral(0.059)	NULL
ARHGAP12	94134	genome.wustl.edu	37	10	32097674	32097674	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018287.5	-1	provisional	p.E757*	1.000	246	0%	119	44.5%	11	0%	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ARHGAP12	94134	genome.wustl.edu	37	10	32098030	32098030	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018287.5	-1	provisional	p.K719Q	1.000	330	0%	148	49.3%	8	25%	probably_damaging(1)	tolerated(0.17)	deleterious(0.559)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
KIF5B	3799	genome.wustl.edu	37	10	32323743	32323743	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004521.2	-1	validated	p.V329A	1.000	365	0%	151	39.1%	44	45.4%	possibly_damaging(0.532)	tolerated(0.46)	neutral(0.192)	HMMSmart_KISc
CCDC7	221016	genome.wustl.edu	37	10	32740683	32740683	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001026383.1	+1	validated	p.K38T	0.024	235	0%	95	38.9%	1	0%	possibly_damaging(0.919)	deleterious(0)	deleterious(0.814)	NULL
C10orf68	79741	genome.wustl.edu	37	10	33017904	33017904	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024688.2	+1	validated	p.S227A	0.000	239	0%	75	42.7%	1	0%	benign(0.029)	tolerated(0.1)	neutral(0.288)	NULL
ITGB1	3688	genome.wustl.edu	37	10	33197297	33197297	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033667.2	-1	reviewed	p.T777M	1.000	500	0%	166	10.8%	224	11.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Integrin_b_cyt
ITGB1	3688	genome.wustl.edu	37	10	33197403	33197403	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033667.2	-1	reviewed	p.L742I	1.000	316	0%	116	42.2%	259	36.6%	probably_damaging(0.994)	tolerated(0.07)	deleterious(0.771)	NULL
PARD3	56288	genome.wustl.edu	37	10	34636988	34636988	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019619.3	-1	validated	p.D708G	1.000	126	0%	49	55.1%	29	48.2%	possibly_damaging(0.736)	deleterious(0.02)	deleterious(0.652)	NULL
CREM	1390	genome.wustl.edu	37	10	35500597	35500597	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181571.1	+1	reviewed	p.E257*	1.000	164	0%	121	46.3%	19	42.1%	-	-	-	HMMSmart_SM00338,PatternScan_BZIP_BASIC,HMMPfam_bZIP_1
CCNY	219771	genome.wustl.edu	37	10	35855027	35855027	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145012.4	+1	validated	p.Y275H	1.000	66	0%	39	51.3%	98	47.9%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
NAMPTL	646309	genome.wustl.edu	37	10	36811810	36811810	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000440465	-1	known	p.S451R	0.050	393	0%	276	14.9%	29	0%	benign(0.001)	tolerated(0.06)	neutral(0.323)	NULL
ANKRD30A	91074	genome.wustl.edu	37	10	37430875	37430875	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052997.2	+1	validated	p.F294	0.002	142	0%	94	46.8%	0	-	-	-	-	NULL
ANKRD30A	91074	genome.wustl.edu	37	10	37436342	37436342	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052997.2	+1	validated	p.E444	0.001	282	0%	56	35.7%	0	-	-	-	-	NULL
ANKRD30A	91074	genome.wustl.edu	37	10	37438600	37438600	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052997.2	+1	validated	p.A466V	0.006	966	0%	359	43.2%	0	-	benign(0.355)	tolerated(0.09)	neutral(0.409)	NULL
ZNF33A	7581	genome.wustl.edu	37	10	38344024	38344024	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006954.1	+1	validated	p.K324N	0.998	188	0%	60	43.3%	6	50%	possibly_damaging(0.935)	tolerated(0.1)	deleterious(0.667)	superfamily_C2H2 and C2HC zinc fingers
ZNF33A	7581	genome.wustl.edu	37	10	38345104	38345104	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006954.1	+1	validated	p.E684D	0.994	339	0%	110	39.1%	13	38.4%	benign(0.287)	tolerated(0.07)	neutral(0.407)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF33A	7581	genome.wustl.edu	37	10	38345115	38345115	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006954.1	+1	validated	p.T688M	1.000	334	0%	114	43%	12	66.6%	probably_damaging(0.995)	deleterious(0.04)	deleterious(0.806)	superfamily_C2H2 and C2HC zinc fingers
CCNYL2	414194	genome.wustl.edu	37	10	42965605	42965605	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000345581	-1	known	p.T17P	0.965	37	0%	29	34.5%	0	-	-	-	-	NULL
ZNF33B	7582	genome.wustl.edu	37	10	43088309	43088309	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006955.1	-1	provisional	p.E697*	0.022	351	0%	131	48.1%	10	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF33B	7582	genome.wustl.edu	37	10	43089423	43089423	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006955.1	-1	provisional	p.G325	1.000	204	0%	78	47.4%	2	50%	-	-	-	superfamily_SSF57667
BMS1	9790	genome.wustl.edu	37	10	43293961	43293961	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014753.3	+1	reviewed	p.L712P	1.000	302	0%	152	46.7%	14	50%	probably_damaging(0.992)	tolerated(0.08)	deleterious(0.748)	superfamily_P-loop containing nucleoside triphosphate hydrolases
BMS1	9790	genome.wustl.edu	37	10	43312116	43312116	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014753.3	+1	reviewed	p.T800N	0.915	185	0%	127	47.2%	19	52.6%	benign(0.01)	tolerated(0.45)	neutral(0.013)	NULL
BMS1	9790	genome.wustl.edu	37	10	43316032	43316032	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014753.3	+1	reviewed	p.R949M	1.000	33	0%	40	45%	21	47.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF663
RET	5979	genome.wustl.edu	37	10	43604667	43604667	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020975.4	+1	reviewed	p.R418*	0.022	22	0%	19	31.6%	0	-	-	-	-	NULL
RET	5979	genome.wustl.edu	37	10	43609968	43609968	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020975.4	+1	reviewed	p.A640	0.000	15	0%	24	50%	1	100%	-	-	-	NULL
RET	5979	genome.wustl.edu	37	10	43615117	43615117	+	Missense_Mutation	SNP	G	G	A	rs55947360		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020975.4	+1	reviewed	p.R844Q	1.000	12	0%	20	55%	1	0%	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
CSGALNACT2	55454	genome.wustl.edu	37	10	43650679	43650679	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018590.3	+1	provisional	p.F28L	0.653	192	0%	119	37.8%	1	100%	benign(0)	tolerated(1)	-	NULL
RASGEF1A	221002	genome.wustl.edu	37	10	43701549	43701549	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145313.2	-1	validated	p.V6I	0.322	26	0%	31	54.8%	0	-	possibly_damaging(0.767)	tolerated(0.78)	neutral(0.285)	NULL
HNRNPF	3185	genome.wustl.edu	37	10	43882693	43882693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098204.1	-1	reviewed	p.G214R	0.991	34	2.9%	33	54.5%	334	44.9%	benign(0.132)	tolerated(0.24)	neutral(0.049)	NULL
HNRNPF	3185	genome.wustl.edu	37	10	43882993	43882993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098204.1	-1	reviewed	p.R114W	0.991	84	1.2%	87	41.4%	229	47.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
CXCL12	6387	genome.wustl.edu	37	10	44876232	44876232	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033886.2	-1	reviewed	p.P53L	0.898	206	0%	113	35.4%	3	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_IL8,HMMSmart_SCY,superfamily_Chemokine_IL8
ZNF22	7570	genome.wustl.edu	37	10	45498974	45498974	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006963.4	+1	validated	p.K53R	0.987	104	0%	50	24%	18	5.5%	benign(0.016)	tolerated(0.27)	neutral(0.034)	superfamily_C2H2 and C2HC zinc fingers
ZFAND4	93550	genome.wustl.edu	37	10	46159042	46159042	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128324.1	-1	validated	p.V44	1.000	217	0.5%	116	40.5%	5	20%	-	-	-	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like
FAM21C	253725	genome.wustl.edu	37	10	46280018	46280018	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015262.2	+1	validated	p.C826	0.001	208	0%	147	38.8%	12	41.6%	-	-	-	NULL
SYT15	83849	genome.wustl.edu	37	10	46968641	46968641	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031912.3	-1	reviewed	p.A99T	0.005	14	0%	19	31.6%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
GPRIN2	9721	genome.wustl.edu	37	10	46999884	46999884	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014696.3	+1	validated	p.A335D	1.000	17	0%	22	27.3%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
GPRIN2	9721	genome.wustl.edu	37	10	47000007	47000007	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014696.3	+1	validated	p.P376L	0.008	47	0%	59	25.4%	0	-	possibly_damaging(0.483)	tolerated(0.32)	neutral(0.184)	NULL
ASAH2C	653365	genome.wustl.edu	37	10	48032987	48032987	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000426610	-1	known	p.Q180*	0.712	242	0%	89	39.3%	0	-	-	-	-	HMMPfam_Ceramidase_alk
GDF2	2658	genome.wustl.edu	37	10	48414022	48414022	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016204.1	-1	reviewed	p.S282	0.000	42	0%	45	51.1%	0	-	-	-	-	NULL
PTPN20C	653045	genome.wustl.edu	37	10	49313222	49313222	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000316733	-1	known	p.Q106H	0.000	144	0%	32	15.6%	0	-	probably_damaging(0.961)	deleterious(0.03)	deleterious(0.768)	NULL
FRMPD2	143162	genome.wustl.edu	37	10	49371421	49371421	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001018071.3	-1	reviewed	p.K1277N	0.956	439	0%	169	27.8%	1	0%	possibly_damaging(0.669)	deleterious(0)	deleterious(0.681)	NULL
FRMPD2	143162	genome.wustl.edu	37	10	49386161	49386161	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001018071.3	-1	reviewed	p.E942*	0.108	352	0.3%	120	36.7%	0	-	-	-	-	superfamily_PDZ domain-like
FRMPD2	143162	genome.wustl.edu	37	10	49448489	49448489	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001018071.3	-1	reviewed	p.R205I	0.999	24	0%	16	56.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ARHGAP22	58504	genome.wustl.edu	37	10	49663093	49663093	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021226.2	-1	validated	p.Y248	0.047	17	0%	19	36.8%	2	50%	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
WDFY4	57705	genome.wustl.edu	37	10	49937632	49937632	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020945.1	+1	validated	p.S376Y	0.220	70	0%	38	50%	0	-	possibly_damaging(0.762)	deleterious(0.01)	deleterious(0.688)	superfamily_ARM repeat
WDFY4	57705	genome.wustl.edu	37	10	49998883	49998883	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020945.1	+1	validated	p.A1393V	0.998	60	0%	39	38.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
WDFY4	57705	genome.wustl.edu	37	10	50154164	50154164	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020945.1	+1	validated	p.K2610T	1.000	226	0%	91	44%	2	0%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_Beach,superfamily_BEACH domain
WDFY4	57705	genome.wustl.edu	37	10	50178213	50178213	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020945.1	+1	validated	p.R2936H	0.814	29	0%	30	40%	0	-	possibly_damaging(0.937)	deleterious(0.01)	deleterious(0.788)	HMMSmart_SM00320,superfamily_WD40 repeat-like
FAM170B	170370	genome.wustl.edu	37	10	50339820	50339820	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000311787	-1	known	p.G230	1.000	17	0%	29	48.3%	0	-	-	-	-	NULL
FAM170B	170370	genome.wustl.edu	37	10	50339904	50339904	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000311787	-1	known	p.Y202	0.000	11	0%	16	50%	0	-	-	-	-	NULL
ERCC6	2074	genome.wustl.edu	37	10	50682119	50682119	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000124.2	-1	reviewed	p.W851L	1.000	202	0%	83	37.3%	5	20%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	superfamily_SSF52540
PGBD3	267004	genome.wustl.edu	37	10	50723611	50723611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170753.2	-1	validated	p.R517Q	0.024	130	0%	59	45.8%	2	100%	probably_damaging(1)	tolerated(0.37)	deleterious(0.519)	NULL
PGBD3	267004	genome.wustl.edu	37	10	50723721	50723721	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170753.2	-1	validated	p.K480N	0.991	105	0%	51	60.8%	3	33.3%	probably_damaging(0.998)	tolerated(0.07)	deleterious(0.793)	NULL
PGBD3	267004	genome.wustl.edu	37	10	50725153	50725153	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170753.2	-1	validated	p.R3Q	0.995	127	0%	37	45.9%	2	50%	benign(0.008)	deleterious(0)	neutral(0.445)	NULL
SLC18A3	6572	genome.wustl.edu	37	10	50818906	50818906	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003055.2	+1	reviewed	p.C40	1.000	11	0%	11	36.4%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SLC18A3	6572	genome.wustl.edu	37	10	50819229	50819229	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003055.2	+1	reviewed	p.R148H	1.000	17	0%	14	28.6%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
PARG	8505	genome.wustl.edu	37	10	51130466	51130466	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003631.2	-1	reviewed	e6-1	1.000	355	0%	149	12.1%	0	-	-	-	-	-
NCOA4	8031	genome.wustl.edu	37	10	51580940	51580940	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145260.1	+1	reviewed	p.A131T	1.000	491	0%	253	41.5%	67	56.7%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	NULL
FAM21A	387680	genome.wustl.edu	37	10	51829402	51829402	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005751.1	+1	validated	p.A74	1.000	439	0%	262	45%	14	21.4%	-	-	-	NULL
CSTF2T	23283	genome.wustl.edu	37	10	53457986	53457986	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015235.2	-1	validated	p.A442T	0.008	166	0%	96	13.5%	31	6.4%	possibly_damaging(0.905)	deleterious(0)	deleterious(0.804)	NULL
CSTF2T	23283	genome.wustl.edu	37	10	53458692	53458692	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015235.2	-1	validated	p.Q206	0.426	84	0%	59	13.6%	14	0%	-	-	-	NULL
PCDH15	65217	genome.wustl.edu	37	10	55581630	55581630	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142763.1	-1	reviewed	p.S1959	0.998	491	0%	198	42.4%	0	-	-	-	-	NULL
PCDH15	65217	genome.wustl.edu	37	10	55582303	55582303	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142763.1	-1	reviewed	p.R1735I	0.000	88	0%	58	41.4%	0	-	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	NULL
TFAM	7019	genome.wustl.edu	37	10	60146031	60146031	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000395377	+1	known	p.E33*	1.000	631	0%	347	40.9%	15	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
BICC1	80114	genome.wustl.edu	37	10	60558967	60558967	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080512.1	+1	reviewed	p.Q560	0.998	84	0%	23	43.5%	5	40%	-	-	-	NULL
BICC1	80114	genome.wustl.edu	37	10	60566874	60566874	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080512.1	+1	reviewed	p.A778T	1.000	121	0%	42	33.3%	10	60%	probably_damaging(0.959)	tolerated(0.22)	neutral(0.445)	NULL
FAM13C	220965	genome.wustl.edu	37	10	61115669	61115669	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000442566	-1	known	p.Q55K	1.000	168	0.6%	77	44.2%	4	25%	benign(0.025)	tolerated(0.14)	neutral(0.251)	NULL
ANK3	288	genome.wustl.edu	37	10	61815564	61815564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020987.2	-1	reviewed	p.S4306F	1.000	467	0%	204	15.7%	5	0%	benign(0.314)	deleterious(0)	deleterious(0.542)	NULL
ENSG00000232682	0	genome.wustl.edu	37	10	61815769	61815769	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000414383	+1	known	NULL	1.000	198	0%	88	39.8%	7	42.8%	benign(0.062)	deleterious(0)	neutral(0.449)	-
ANK3	288	genome.wustl.edu	37	10	61819478	61819478	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000514197	-1	known	p.A197V	1.000	123	0%	52	44.2%	11	27.2%	-	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61829870	61829870	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020987.2	-1	reviewed	p.D3590G	1.000	302	0%	134	44.8%	1	100%	probably_damaging(0.976)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61834574	61834574	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020987.2	-1	reviewed	p.A2022D	0.957	120	0%	52	46.2%	0	-	benign(0.013)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61835783	61835783	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020987.2	-1	reviewed	p.T1619M	0.076	66	0%	34	50%	0	-	possibly_damaging(0.943)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61836047	61836047	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020987.2	-1	reviewed	p.T1531M	1.000	205	0%	78	42.3%	0	-	probably_damaging(0.999)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61844443	61844443	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020987.2	-1	reviewed	p.F1331I	1.000	208	0%	69	37.7%	4	0%	probably_damaging(0.996)	tolerated(0.1)	deleterious(0.748)	NULL
ANK3	288	genome.wustl.edu	37	10	61844449	61844449	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020987.2	-1	reviewed	p.R1329*	1.000	199	0%	70	21.4%	3	66.6%	-	-	-	NULL
RHOBTB1	9886	genome.wustl.edu	37	10	62632025	62632025	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014836.4	-1	reviewed	p.A613	0.941	171	0%	71	43.7%	20	30%	-	-	-	NULL
ZNF365	22891	genome.wustl.edu	37	10	64136240	64136240	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199451.2	+1	reviewed	p.P96	0.001	108	0%	82	39%	0	-	-	-	-	NULL
EGR2	1959	genome.wustl.edu	37	10	64573654	64573654	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000399.3	-1	reviewed	p.P248	1.000	37	0%	45	44.4%	5	60%	-	-	-	NULL
JMJD1C	221037	genome.wustl.edu	37	10	64943219	64943219	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032776.1	-1	validated	p.L2358I	0.999	313	0%	136	45.6%	13	53.8%	possibly_damaging(0.811)	tolerated(0.2)	neutral(0.354)	HMMSmart_SM00558
CTNNA3	29119	genome.wustl.edu	37	10	68526128	68526128	+	Missense_Mutation	SNP	G	G	A	rs146777494	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127384.1	-1	validated	p.T392M	1.000	280	0%	78	53.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin
LRRTM3	347731	genome.wustl.edu	37	10	68687469	68687469	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178011.3	+1	validated	p.I265	0.545	47	0%	30	63.3%	0	-	-	-	-	HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
LRRTM3	347731	genome.wustl.edu	37	10	68687726	68687726	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178011.3	+1	validated	p.V351A	1.000	87	0%	64	31.2%	0	-	possibly_damaging(0.67)	deleterious(0)	deleterious(0.682)	NULL
SIRT1	23411	genome.wustl.edu	37	10	69676051	69676051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142498.1	+1	reviewed	p.R354C	1.000	178	0.6%	92	47.8%	14	35.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MYPN	84665	genome.wustl.edu	37	10	69881450	69881450	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032578.2	+1	validated	p.Y85	0.016	44	0%	32	46.9%	0	-	-	-	-	NULL
RUFY2	55680	genome.wustl.edu	37	10	70123348	70123348	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017987.4	-1	validated	p.E552K	1.000	203	0%	106	39.6%	5	60%	benign(0.014)	tolerated(0.66)	neutral(0.003)	NULL
DNA2	1763	genome.wustl.edu	37	10	70190383	70190383	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080449.1	-1	provisional	p.L759S	1.000	213	0%	121	47.1%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
TET1	80312	genome.wustl.edu	37	10	70333930	70333930	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030625.2	+1	validated	p.R612I	0.988	76	0%	36	44.4%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-CXXC
TET1	80312	genome.wustl.edu	37	10	70404720	70404720	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030625.2	+1	validated	p.R745Q	0.000	144	0%	62	37.1%	3	100%	benign(0.012)	tolerated(0.92)	neutral(0.001)	NULL
TET1	80312	genome.wustl.edu	37	10	70406057	70406057	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030625.2	+1	validated	p.I1191L	0.538	122	0%	53	45.3%	3	33.3%	benign(0.232)	tolerated(0.1)	neutral(0.309)	NULL
TET1	80312	genome.wustl.edu	37	10	70442624	70442624	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030625.2	+1	validated	p.R1649Q	1.000	210	0.5%	91	44%	18	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TET1	80312	genome.wustl.edu	37	10	70451439	70451439	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030625.2	+1	validated	p.E2093	0.000	136	0%	79	53.2%	12	66.6%	-	-	-	NULL
CCAR1	55749	genome.wustl.edu	37	10	70516082	70516082	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018237.2	+1	validated	p.R560C	1.000	163	0%	126	45.2%	45	55.5%	unknown(0)	deleterious(0.01)	-	NULL
STOX1	219736	genome.wustl.edu	37	10	70646374	70646374	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130161.2	+1	reviewed	p.R941Q	1.000	50	0%	22	40.9%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DDX21	9188	genome.wustl.edu	37	10	70728863	70728863	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004728.2	+1	reviewed	p.A408T	1.000	367	0%	207	45.4%	33	51.5%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIAA1279	26128	genome.wustl.edu	37	10	70760280	70760280	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015634.3	+1	reviewed	e2+2	1.000	182	0%	78	44.9%	1	0%	-	-	-	-
HKDC1	80201	genome.wustl.edu	37	10	70987108	70987108	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025130.3	+1	validated	p.A70V	1.000	23	0%	28	17.9%	5	0%	benign(0.141)	deleterious(0.01)	neutral(0.418)	HMMPfam_Hexokinase_1,superfamily_Actin-like ATPase domain
HKDC1	80201	genome.wustl.edu	37	10	71007256	71007256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025130.3	+1	validated	p.A391V	1.000	30	0%	18	33.3%	4	25%	benign(0.275)	tolerated(0.22)	neutral(0.072)	HMMPfam_Hexokinase_2,superfamily_Actin-like ATPase domain
HK1	3098	genome.wustl.edu	37	10	71119661	71119661	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033497.2	+1	reviewed	p.D83N	1.000	99	0%	80	15%	51	21.5%	possibly_damaging(0.88)	tolerated(0.13)	deleterious(0.596)	HMMPfam_Hexokinase_1,superfamily_SSF53067
HK1	3098	genome.wustl.edu	37	10	71144199	71144199	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033497.2	+1	reviewed	p.A565T	0.998	105	0%	51	37.3%	71	43.6%	benign(0)	tolerated(0.21)	neutral(0.044)	HMMPfam_Hexokinase_1,superfamily_SSF53067
COL13A1	1305	genome.wustl.edu	37	10	71640298	71640298	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130103.1	+1	reviewed	p.R159C	0.983	59	0%	74	52.7%	2	50%	probably_damaging(1)	-	-	HMMPfam_Collagen
COL13A1	1305	genome.wustl.edu	37	10	71658462	71658462	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130103.1	+1	reviewed	p.L242I	1.000	140	0%	121	43%	2	0%	possibly_damaging(0.747)	-	-	NULL
SAR1A	56681	genome.wustl.edu	37	10	71913610	71913610	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142648.1	-1	validated	p.G155V	1.000	600	0.2%	263	35%	153	35.2%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIAA1274	27143	genome.wustl.edu	37	10	72292376	72292376	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014431.2	+1	validated	e5-1	1.000	16	0%	21	42.9%	0	-	-	-	-	-
KIAA1274	27143	genome.wustl.edu	37	10	72294246	72294246	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014431.2	+1	validated	p.R363H	0.000	39	0%	46	43.5%	1	0%	benign(0)	tolerated(0.16)	neutral(0.059)	NULL
PRF1	5551	genome.wustl.edu	37	10	72358087	72358087	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083116.1	-1	reviewed	p.R464W	0.000	30	0%	33	48.5%	8	0%	benign(0.045)	deleterious(0.02)	neutral(0.386)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PRF1	5551	genome.wustl.edu	37	10	72358727	72358727	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083116.1	-1	reviewed	p.T250	0.000	34	0%	35	31.4%	11	0%	-	-	-	HMMPfam_MACPF,HMMSmart_SM00457
PRF1	5551	genome.wustl.edu	37	10	72360364	72360364	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083116.1	-1	reviewed	p.G99C	0.000	6	0.000	16	0.375	5	0%	probably_damaging(0.988)	tolerated(0.14)	deleterious(0.687)	NULL
ADAMTS14	140766	genome.wustl.edu	37	10	72462081	72462081	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139155.2	+1	reviewed	p.R179H	1.000	14	0%	14	57.1%	0	-	possibly_damaging(0.949)	tolerated(0.12)	deleterious(0.653)	HMMPfam_Pep_M12B_propep
ADAMTS14	140766	genome.wustl.edu	37	10	72468517	72468517	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139155.2	+1	reviewed	p.L285F	1.000	28	0%	21	33.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Reprolysin,superfamily_SSF55486
ADAMTS14	140766	genome.wustl.edu	37	10	72517720	72517720	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139155.2	+1	reviewed	p.C983*	1.000	28	0%	17	41.2%	0	-	-	-	-	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1
ADAMTS14	140766	genome.wustl.edu	37	10	72520170	72520170	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139155.2	+1	reviewed	p.R1081H	1.000	21	0%	21	52.4%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ADAMTS14	140766	genome.wustl.edu	37	10	72520413	72520413	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139155.2	+1	reviewed	p.S1162F	0.024	32	0%	35	37.1%	0	-	possibly_damaging(0.708)	deleterious(0.01)	deleterious(0.661)	NULL
C10orf27	219793	genome.wustl.edu	37	10	72532304	72532304	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152710.2	-1	validated	p.T312	0.000	624	0%	292	51%	0	-	-	-	-	NULL
C10orf27	219793	genome.wustl.edu	37	10	72541755	72541755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152710.2	-1	validated	p.R27C	0.000	36	0%	35	45.7%	0	-	benign(0.003)	tolerated(0.15)	neutral(0.241)	NULL
PCBD1	5092	genome.wustl.edu	37	10	72645599	72645599	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000281.2	-1	reviewed	p.R31C	0.998	113	0%	70	32.9%	166	39.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pterin_4a,superfamily_Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
SLC29A3	55315	genome.wustl.edu	37	10	73115864	73115864	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000373189	+1	known	p.A213T	0.997	27	0%	24	20.8%	10	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Nucleoside_tran
CDH23	64072	genome.wustl.edu	37	10	73330637	73330637	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022124.5	+1	reviewed	p.L239	1.000	109	0%	70	40%	2	0%	-	-	-	superfamily_Cadherin-like
CDH23	64072	genome.wustl.edu	37	10	73437409	73437409	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022124.5	+1	reviewed	p.R571W	0.941	14	7.1%	18	38.9%	3	66.6%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	HMMPfam_Cadherin,superfamily_Cadherin-like
CDH23	64072	genome.wustl.edu	37	10	73491982	73491982	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022124.5	+1	reviewed	p.Y1318	0.681	21	0%	33	51.5%	0	-	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
CDH23	64072	genome.wustl.edu	37	10	73500627	73500627	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022124.5	+1	reviewed	p.L1513	1.000	37	0%	39	53.8%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
SPOCK2	9806	genome.wustl.edu	37	10	73822856	73822856	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014767.2	-1	validated	p.S352	0.111	15	0%	16	50%	9	0%	-	-	-	HMMPfam_Thyroglobulin_1,HMMSmart_TY,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin_1
SPOCK2	9806	genome.wustl.edu	37	10	73827463	73827463	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014767.2	-1	validated	p.D206G	1.000	10	0%	12	50%	12	0%	possibly_damaging(0.888)	tolerated(0.19)	neutral(0.397)	HMMPfam_SPARC_Ca_bdg,superfamily_SSF47473
ASCC1	51008	genome.wustl.edu	37	10	73857142	73857142	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015947.2	-1	validated	p.V342I	0.978	208	0%	94	21.3%	14	7.1%	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
ASCC1	51008	genome.wustl.edu	37	10	73973043	73973043	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015947.2	-1	validated	p.R5H	1.000	394	0%	261	50.2%	8	50%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
DNAJB12	54788	genome.wustl.edu	37	10	74100756	74100756	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002762.2	-1	validated	p.G244	0.954	32	0%	49	42.9%	38	47.3%	-	-	-	superfamily_Chaperone J-domain
MCU	90550	genome.wustl.edu	37	10	74619001	74619001	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138357.1	+1	provisional	p.R96H	1.000	306	0.3%	143	48.3%	17	70.5%	benign(0.381)	tolerated(0.48)	neutral(0.132)	NULL
OIT3	170392	genome.wustl.edu	37	10	74684093	74684093	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152635.1	+1	provisional	p.P353L	1.000	20	0%	14	28.6%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Zona_pellucida,HMMSmart_SM00241
PLA2G12B	84647	genome.wustl.edu	37	10	74714297	74714297	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032562.2	-1	validated	p.Y49	1.000	63	0%	36	19.4%	0	-	-	-	-	HMMPfam_PLA2G12
P4HA1	5033	genome.wustl.edu	37	10	74806754	74806754	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000917.3	-1	reviewed	p.R336C	1.000	314	0%	156	42.3%	66	46.9%	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	HMMSmart_SM00702
ECD	11319	genome.wustl.edu	37	10	74894303	74894303	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024203.1	-1	validated	NULL	0.213	70	0%	26	38.5%	2	50%	-	-	-	-
FAM149B1	317662	genome.wustl.edu	37	10	74937685	74937685	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000372955	+1	known	p.A19V	1.000	232	0%	151	40.4%	5	20%	-	-	-	NULL
TTC18	118491	genome.wustl.edu	37	10	75107989	75107989	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145170.3	-1	validated	p.Q118H	0.075	147	0.7%	78	53.8%	0	-	benign(0.314)	deleterious(0.01)	deleterious(0.504)	NULL
ANXA7	310	genome.wustl.edu	37	10	75135945	75135945	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004034.2	-1	reviewed	p.A459T	0.000	159	0%	62	46.8%	91	45%	benign(0)	tolerated(0.59)	neutral(0.004)	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_SM00335
USP54	159195	genome.wustl.edu	37	10	75290129	75290129	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152586.3	-1	provisional	p.G534S	0.686	232	0%	137	46%	11	36.3%	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	NULL
SYNPO2L	79933	genome.wustl.edu	37	10	75407136	75407136	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114133.1	-1	validated	p.G758	0.997	11	0%	22	40.9%	0	-	-	-	-	NULL
SYNPO2L	79933	genome.wustl.edu	37	10	75412978	75412978	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114133.1	-1	validated	p.L231I	1.000	27	0%	26	53.8%	0	-	benign(0.388)	deleterious(0)	deleterious(0.569)	NULL
SYNPO2L	79933	genome.wustl.edu	37	10	75413976	75413976	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114133.1	-1	validated	p.I56	1.000	54	0%	37	43.2%	0	-	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
AGAP5	729092	genome.wustl.edu	37	10	75435178	75435178	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144000.1	-1	validated	p.V414M	1.000	23	0%	21	38.1%	3	33.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
SEC24C	9632	genome.wustl.edu	37	10	75529694	75529694	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004922.2	+1	reviewed	p.R928H	1.000	118	0%	87	47.1%	120	40.8%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	HMMPfam_Sec23_helical,superfamily_Helical domain of Sec23/24
NDST2	8509	genome.wustl.edu	37	10	75564577	75564577	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003635.3	-1	reviewed	p.T599	0.972	159	0%	99	49.5%	7	57.1%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
VCL	7414	genome.wustl.edu	37	10	75864808	75864808	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014000.2	+1	reviewed	e16-1	1.000	29	0%	14	50%	5	100%	-	-	-	-
VCL	7414	genome.wustl.edu	37	10	75873970	75873970	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014000.2	+1	reviewed	p.R993H	1.000	20	0%	10	40%	57	47.3%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin
ADK	132	genome.wustl.edu	37	10	76153949	76153949	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006721.2	+1	reviewed	p.G108	0.000	253	0.4%	88	40.9%	39	48.7%	-	-	-	HMMPfam_PfkB,superfamily_Ribokinase-like
KAT6B	23522	genome.wustl.edu	37	10	76790093	76790093	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012330.2	+1	validated	p.S1837	0.998	138	0%	110	50.9%	30	43.3%	-	-	-	NULL
DUSP13	51207	genome.wustl.edu	37	10	76855504	76855504	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007273.1	-1	reviewed	p.V168I	0.007	30	0%	46	43.5%	0	-	benign(0.002)	tolerated(0.46)	neutral(0.012)	HMMPfam_DSPc,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II
DLG5	9231	genome.wustl.edu	37	10	79616543	79616543	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004747.3	-1	reviewed	p.N161D	1.000	12	0%	15	40%	20	55%	unknown(0)	tolerated(1)	-	HMMPfam_DUF622
ZMIZ1	57178	genome.wustl.edu	37	10	81065963	81065963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020338.3	+1	validated	p.R844W	1.000	31	0%	15	40%	26	34.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PPIF	10105	genome.wustl.edu	37	10	81112146	81112146	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000448165	+1	known	p.T126I	0.987	57	0%	32	37.5%	120	50%	-	-	-	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
PPIF	10105	genome.wustl.edu	37	10	81113527	81113527	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005729.3	+1	reviewed	p.E185*	1.000	91	0%	49	40.8%	125	55.2%	-	-	-	HMMPfam_Pro_isomerase,superfamily_CSA_PPIase
ZCCHC24	219654	genome.wustl.edu	37	10	81154182	81154182	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000372333	-1	known	p.R95*	0.269	52	0%	56	50%	5	60%	-	-	-	NULL
EIF5AL1	143244	genome.wustl.edu	37	10	81272433	81272433	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099692.1	+1	validated	p.G10*	0.936	66	0%	84	22.6%	72	0%	-	-	-	NULL
SFTPD	6441	genome.wustl.edu	37	10	81700463	81700463	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003019.4	-1	validated	p.K250T	1.000	41	0%	19	42.1%	0	-	possibly_damaging(0.629)	-	-	HMMPfam_Surfac_D-trimer
PLAC9	219348	genome.wustl.edu	37	10	81901916	81901916	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012973.1	+1	provisional	p.R48H	0.020	51	0%	46	39.1%	1	0%	probably_damaging(0.986)	-	-	NULL
DYDC2	84332	genome.wustl.edu	37	10	82126561	82126561	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032372.4	+1	provisional	p.P130S	0.000	105	0%	47	34%	0	-	benign(0.093)	tolerated(0.21)	neutral(0.051)	NULL
LRIT2	340745	genome.wustl.edu	37	10	85984584	85984584	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017924.2	-1	validated	p.D133N	1.000	50	0%	32	65.6%	0	-	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	superfamily_SSF52058
LRIT1	26103	genome.wustl.edu	37	10	85992259	85992259	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015613.2	-1	validated	p.R432	0.905	21	0%	18	44.4%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_FN3
LRIT1	26103	genome.wustl.edu	37	10	85992314	85992314	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015613.2	-1	validated	p.A414D	0.000	18	0%	16	56.2%	0	-	possibly_damaging(0.492)	tolerated(0.06)	deleterious(0.487)	NULL
RGR	5995	genome.wustl.edu	37	10	86017730	86017730	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002921.3	+1	reviewed	p.D242Y	0.179	38	0%	20	40%	2	50%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FAM190B	54462	genome.wustl.edu	37	10	86131991	86131991	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018999.2	+1	validated	p.D395Y	1.000	260	0%	90	40%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GRID1	2894	genome.wustl.edu	37	10	87362312	87362312	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000327946	-1	known	p.R699Q	0.000	22	0%	30	46.7%	2	50%	-	-	-	NULL
GRID1	2894	genome.wustl.edu	37	10	87379739	87379739	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017551.2	-1	reviewed	p.A749T	1.000	42	0%	18	33.3%	1	0%	probably_damaging(1)	tolerated(0.4)	deleterious(0.516)	HMMPfam_Lig_chan,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II
WAPAL	23063	genome.wustl.edu	37	10	88221024	88221024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015045.2	-1	validated	p.E797D	1.000	218	0%	110	41.8%	15	53.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_WAPL,superfamily_ARM repeat
C10orf116	10974	genome.wustl.edu	37	10	88729999	88729999	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006829.2	+1	validated	p.A35V	0.992	9	0.000	14	0.571	80	38.7%	benign(0.021)	deleterious(0)	neutral(0.446)	NULL
AGAP11	119385	genome.wustl.edu	37	10	88768753	88768753	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133447.1	+1	validated	p.K248N	1.000	42	0%	31	32.3%	1	0%	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
AGAP11	119385	genome.wustl.edu	37	10	88769651	88769651	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133447.1	+1	validated	p.E548K	1.000	55	0%	55	41.8%	2	0%	-	-	-	HMMSmart_ANK
FAM22D	728130	genome.wustl.edu	37	10	89117988	89117988	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000330762	+1	known	p.L61	0.364	260	0%	219	22.4%	1	0%	-	-	-	NULL
ATAD1	84896	genome.wustl.edu	37	10	89544353	89544353	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032810.2	-1	provisional	p.R153*	1.000	127	0%	50	48%	26	7.6%	-	-	-	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
PTEN	5728	genome.wustl.edu	37	10	89624258	89624258	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371953	+1	known	p.R11K	1.000	233	0%	209	38.3%	27	55.5%	benign(0.001)	tolerated(1)	-	NULL
PTEN	5728	genome.wustl.edu	37	10	89685308	89685308	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371953	+1	known	p.Y68C	1.000	312	0%	94	37.2%	32	62.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTEN	5728	genome.wustl.edu	37	10	89717713	89717713	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371953	+1	known	p.P246	0.041	226	0%	92	45.7%	40	65%	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
PTEN	5728	genome.wustl.edu	37	10	89720744	89720744	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371953	+1	known	p.E299*	1.000	352	0%	131	42%	39	17.9%	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
RNLS	55328	genome.wustl.edu	37	10	90074235	90074235	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031709.2	-1	validated	p.W288*	1.000	186	0%	56	51.8%	0	-	-	-	-	superfamily_FAD/NAD(P)-binding domain
LIPJ	142910	genome.wustl.edu	37	10	90356597	90356597	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010939.2	+1	validated	p.F209	0.000	276	0%	69	36.2%	0	-	-	-	-	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases
LIPJ	142910	genome.wustl.edu	37	10	90366521	90366521	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010939.2	+1	validated	p.V320I	0.683	268	0%	87	42.5%	0	-	benign(0.289)	tolerated(0.15)	neutral(0.330)	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases
LIPF	8513	genome.wustl.edu	37	10	90428471	90428471	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004190.2	+1	reviewed	p.N127T	0.092	163	0%	91	38.5%	8	12.5%	benign(0.358)	deleterious(0)	deleterious(0.558)	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases
LIPN	643418	genome.wustl.edu	37	10	90526051	90526051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102469.1	+1	validated	p.L151F	1.000	373	0%	66	50%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Abhydrolase_1,superfamily_SSF53474
ANKRD22	118932	genome.wustl.edu	37	10	90585815	90585815	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144590.2	-1	validated	p.E127K	0.839	139	0%	66	42.4%	1	0%	benign(0.001)	deleterious(0.01)	neutral(0.406)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ACTA2	59	genome.wustl.edu	37	10	90699346	90699346	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001141945.1	-1	reviewed	p.Y242	0.469	60	0%	25	24%	213	18.7%	-	-	-	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
ACTA2	59	genome.wustl.edu	37	10	90703578	90703578	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001141945.1	-1	reviewed	p.K115N	1.000	90	0%	38	15.8%	160	6.8%	benign(0.339)	-	-	HMMPfam_Actin,HMMSmart_SM00268,PatternScan_ACTINS_ACT_LIKE,superfamily_Actin-like ATPase domain
FAS	355	genome.wustl.edu	37	10	90768681	90768681	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000043.3	+1	reviewed	p.N124H	0.998	230	0%	73	37%	21	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_TNF receptor-like
CH25H	9023	genome.wustl.edu	37	10	90966294	90966294	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003956.3	-1	reviewed	p.P252	0.357	17	0%	10	50%	4	100%	-	-	-	NULL
IFIT2	3433	genome.wustl.edu	37	10	91066895	91066895	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001547.4	+1	validated	p.H394Q	0.255	164	0%	61	36.1%	2	50%	benign(0.095)	tolerated(0.17)	neutral(0.066)	superfamily_SSF48452
IFIT1B	439996	genome.wustl.edu	37	10	91143639	91143639	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010987.2	+1	validated	p.K190T	0.000	147	0%	50	36%	0	-	benign(0)	tolerated(0.44)	neutral(0.013)	superfamily_TPR-like
IFIT5	24138	genome.wustl.edu	37	10	91177706	91177706	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012420.2	+1	validated	p.Y250	0.324	236	0%	137	40.9%	5	20%	-	-	-	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452
SLC16A12	387700	genome.wustl.edu	37	10	91198855	91198855	+	Silent	SNP	G	G	A	rs192441993	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213606.3	-1	validated	p.I148	0.937	39	0%	15	46.7%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
PANK1	53354	genome.wustl.edu	37	10	91371471	91371471	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148977.1	-1	reviewed	p.F346	0.088	75	0%	31	48.4%	11	18.1%	-	-	-	HMMPfam_Fumble,superfamily_Actin-like ATPase domain
KIF20B	9585	genome.wustl.edu	37	10	91479371	91479371	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016195.2	+1	validated	p.E544K	0.983	187	0%	76	44.7%	2	0%	possibly_damaging(0.892)	tolerated(0.12)	deleterious(0.612)	NULL
KIF20B	9585	genome.wustl.edu	37	10	91497516	91497516	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016195.2	+1	validated	p.R933I	0.273	178	0%	59	40.7%	2	100%	possibly_damaging(0.677)	deleterious(0.04)	deleterious(0.590)	NULL
KIF20B	9585	genome.wustl.edu	37	10	91511160	91511160	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016195.2	+1	validated	p.E1345G	1.000	226	0%	85	32.9%	12	58.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
PCGF5	84333	genome.wustl.edu	37	10	93008299	93008299	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032373.3	+1	provisional	p.V83I	1.000	604	0%	140	45.7%	8	37.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_RING/U-box
PCGF5	84333	genome.wustl.edu	37	10	93031398	93031398	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032373.3	+1	provisional	p.R223W	1.000	86	0%	52	44.2%	4	25%	possibly_damaging(0.909)	deleterious(0.03)	deleterious(0.726)	NULL
HECTD2	143279	genome.wustl.edu	37	10	93247344	93247344	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371668	+1	known	p.F117L	0.996	88	0%	49	20.4%	0	-	unknown(0)	deleterious(0)	-	NULL
FGFBP3	143282	genome.wustl.edu	37	10	93668173	93668173	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152429.4	-1	validated	p.A185D	0.001	24	0%	21	47.6%	3	0%	benign(0.075)	tolerated(0.52)	neutral(0.014)	HMMPfam_FGF-BP1
BTAF1	9044	genome.wustl.edu	37	10	93718898	93718898	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003972.2	+1	validated	p.S326N	1.000	272	0%	132	27.3%	10	50%	benign(0.081)	tolerated(0.23)	neutral(0.048)	superfamily_ARM repeat
BTAF1	9044	genome.wustl.edu	37	10	93744056	93744056	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003972.2	+1	validated	p.M774I	1.000	125	0%	57	38.6%	9	33.3%	benign(0.081)	tolerated(0.07)	neutral(0.325)	superfamily_ARM repeat
BTAF1	9044	genome.wustl.edu	37	10	93749130	93749130	+	Missense_Mutation	SNP	G	G	A	rs79134325		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003972.2	+1	validated	p.E883K	1.000	83	0%	57	38.6%	4	75%	probably_damaging(0.974)	deleterious(0.02)	deleterious(0.799)	superfamily_ARM repeat
CPEB3	22849	genome.wustl.edu	37	10	93940762	93940762	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014912.4	-1	validated	p.N394H	1.000	342	0%	124	45.2%	1	0%	possibly_damaging(0.945)	deleterious(0.02)	deleterious(0.772)	NULL
MARCH5	54708	genome.wustl.edu	37	10	94109496	94109496	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017824.4	+1	validated	p.R208*	1.000	243	0%	123	49.6%	54	16.6%	-	-	-	NULL
IDE	3416	genome.wustl.edu	37	10	94294415	94294415	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004969.3	-1	reviewed	p.S137R	1.000	292	0%	146	17.8%	9	44.4%	possibly_damaging(0.835)	tolerated(0.22)	neutral(0.360)	superfamily_Metalloenz_metal-bd,HMMPfam_Peptidase_M16
KIF11	3832	genome.wustl.edu	37	10	94405238	94405238	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004523.3	+1	reviewed	p.E796*	1.000	209	0%	63	41.3%	8	25%	-	-	-	NULL
HHEX	3087	genome.wustl.edu	37	10	94454459	94454459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002729.4	+1	reviewed	p.E249D	1.000	115	0%	100	41%	1	0%	benign(0.253)	tolerated(0.69)	neutral(0.028)	NULL
EXOC6	54536	genome.wustl.edu	37	10	94669348	94669348	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019053.4	+1	reviewed	p.R208Q	1.000	219	0%	59	44.1%	2	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
EXOC6	54536	genome.wustl.edu	37	10	94733939	94733939	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019053.4	+1	reviewed	p.D635N	1.000	260	0%	122	34.4%	4	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Sec15
MYOF	26509	genome.wustl.edu	37	10	95089473	95089473	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013451.3	-1	reviewed	p.R1644*	1.000	314	0%	194	37.6%	11	18.1%	-	-	-	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
MYOF	26509	genome.wustl.edu	37	10	95111508	95111508	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013451.3	-1	reviewed	p.D1193N	0.997	417	0.2%	218	38.5%	4	0%	benign(0)	tolerated(0.58)	neutral(0.005)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
MYOF	26509	genome.wustl.edu	37	10	95119660	95119660	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013451.3	-1	reviewed	p.T1017S	1.000	251	0%	144	24.3%	12	16.6%	benign(0.002)	tolerated(0.22)	neutral(0.042)	HMMSmart_SM00694
MYOF	26509	genome.wustl.edu	37	10	95134654	95134654	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013451.3	-1	reviewed	p.R723*	0.437	92	0%	52	48.1%	9	11.1%	-	-	-	HMMPfam_FerA
SLC35G1	159371	genome.wustl.edu	37	10	95660892	95660892	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134658.1	+1	validated	p.S248Y	1.000	212	0%	114	36%	4	50%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_DUF6
PLCE1	51196	genome.wustl.edu	37	10	95987084	95987084	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016341.3	+1	reviewed	p.L611	1.000	79	0%	65	44.6%	5	40%	-	-	-	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
PLCE1	51196	genome.wustl.edu	37	10	96018575	96018575	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016341.3	+1	reviewed	p.S1191	1.000	225	0%	114	10.5%	7	0%	-	-	-	NULL
NOC3L	64318	genome.wustl.edu	37	10	96101453	96101453	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022451.9	-1	provisional	p.L541I	1.000	245	0%	72	15.3%	7	14.2%	probably_damaging(0.999)	tolerated(0.17)	deleterious(0.549)	NULL
NOC3L	64318	genome.wustl.edu	37	10	96109884	96109884	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022451.9	-1	provisional	p.D372N	1.000	189	0%	112	50.9%	9	11.1%	possibly_damaging(0.811)	tolerated(1)	neutral(0.305)	NULL
CYP2C18	1562	genome.wustl.edu	37	10	96466623	96466623	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000772.2	+1	reviewed	p.S242N	0.000	225	0%	50	40%	0	-	benign(0)	tolerated(0.57)	neutral(0.006)	HMMPfam_p450,superfamily_Cytochrome P450
CYP2C19	1557	genome.wustl.edu	37	10	96612638	96612638	+	Silent	SNP	G	G	A	rs28399514		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000769.1	+1	reviewed	p.P480	0.220	204	0.5%	83	37.3%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
PDLIM1	9124	genome.wustl.edu	37	10	97023789	97023789	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020992.2	-1	provisional	p.R122Q	1.000	83	0%	62	54.8%	256	41%	probably_damaging(1)	tolerated(0.32)	deleterious(0.524)	NULL
SORBS1	10580	genome.wustl.edu	37	10	97082550	97082550	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034956.1	-1	validated	p.S811P	1.000	187	0%	85	49.4%	1	0%	possibly_damaging(0.661)	tolerated(0.21)	neutral(0.278)	superfamily_SH3
SORBS1	10580	genome.wustl.edu	37	10	97096604	97096604	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034954.1	-1	validated	p.S1105P	1.000	57	0%	84	10.7%	0	-	possibly_damaging(0.674)	tolerated(0.15)	deleterious(0.480)	NULL
ALDH18A1	5832	genome.wustl.edu	37	10	97366548	97366548	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002860.3	-1	reviewed	p.L787I	1.000	75	0%	32	40.6%	74	28.3%	benign(0.017)	tolerated(0.13)	neutral(0.253)	NULL
ALDH18A1	5832	genome.wustl.edu	37	10	97373894	97373894	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002860.3	-1	reviewed	p.D544Y	1.000	69	0%	40	35%	79	59.4%	benign(0.113)	deleterious(0.05)	neutral(0.354)	superfamily_ALDH-like
ALDH18A1	5832	genome.wustl.edu	37	10	97376297	97376297	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002860.3	-1	reviewed	p.R514	0.810	38	0%	25	36%	67	29.8%	-	-	-	superfamily_ALDH-like
ALDH18A1	5832	genome.wustl.edu	37	10	97397042	97397042	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002860.3	-1	reviewed	e3+2	1.000	28	0%	20	35%	7	71.4%	-	-	-	-
ENTPD1	953	genome.wustl.edu	37	10	97599460	97599460	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098175.1	+1	validated	p.A48V	1.000	137	0%	75	40%	16	6.2%	-	-	-	NULL
CC2D2B	387707	genome.wustl.edu	37	10	97773548	97773548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001732.3	+1	validated	p.L108I	0.825	342	0%	93	38.7%	0	-	probably_damaging(0.99)	tolerated(0.05)	deleterious(0.787)	NULL
CC2D2B	387707	genome.wustl.edu	37	10	97787006	97787006	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000451649	+1	known	p.R293*	0.993	365	0%	120	46.7%	0	-	-	-	-	NULL
BLNK	29760	genome.wustl.edu	37	10	97951767	97951767	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013314.3	-1	reviewed	p.D445Y	1.000	834	0%	391	44.5%	2	100%	unknown(0)	deleterious(0)	-	superfamily_SH2 domain
DNTT	1791	genome.wustl.edu	37	10	98080448	98080448	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004088.3	+1	reviewed	p.A194V	0.997	232	0%	71	39.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00483,superfamily_DNA polymerase beta N-terminal domain-like
TLL2	7093	genome.wustl.edu	37	10	98133429	98133429	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012465.3	-1	validated	p.S862	0.020	37	0%	40	52.5%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_CUB,superfamily_CUB
TLL2	7093	genome.wustl.edu	37	10	98136474	98136474	+	Missense_Mutation	SNP	G	G	A	rs183751282	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012465.3	-1	validated	p.S808L	0.955	90	0%	38	44.7%	0	-	benign(0.103)	deleterious(0)	neutral(0.453)	HMMPfam_CUB,HMMSmart_CUB,superfamily_CUB
TLL2	7093	genome.wustl.edu	37	10	98188387	98188387	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012465.3	-1	validated	e5+1	1.000	96	0%	40	20%	0	-	-	-	-	-
PIK3AP1	118788	genome.wustl.edu	37	10	98388217	98388217	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152309.2	-1	validated	p.P470L	0.004	165	0%	92	43.5%	4	0%	possibly_damaging(0.828)	deleterious(0)	deleterious(0.758)	NULL
ARHGAP19	84986	genome.wustl.edu	37	10	99023360	99023360	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032900.4	-1	validated	p.V144L	1.000	166	0%	84	39.3%	3	100%	benign(0.208)	tolerated(0.4)	neutral(0.036)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
PGAM1	5223	genome.wustl.edu	37	10	99190719	99190719	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002629.2	+1	provisional	p.R141M	1.000	150	0%	88	54.5%	149	63%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_PGAM,superfamily_Phosphoglycerate mutase-like
ZDHHC16	84287	genome.wustl.edu	37	10	99215517	99215517	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032327.2	+1	validated	p.R309C	0.001	100	0%	77	46.8%	65	40%	benign(0.002)	deleterious(0.01)	neutral(0.406)	NULL
MMS19	64210	genome.wustl.edu	37	10	99228160	99228160	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022362.4	-1	validated	p.C356Y	1.000	16	0%	15	53.3%	32	21.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM repeat
MORN4	118812	genome.wustl.edu	37	10	99377077	99377077	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098831.1	-1	validated	p.R24C	1.000	114	0%	58	53.4%	8	37.5%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
PI4K2A	55361	genome.wustl.edu	37	10	99416633	99416633	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018425.2	+1	provisional	p.R275Q	1.000	137	0%	99	45.5%	16	37.5%	possibly_damaging(0.699)	tolerated(0.06)	deleterious(0.574)	HMMPfam_PI3_PI4_kinase
ZFYVE27	118813	genome.wustl.edu	37	10	99517041	99517041	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002261.3	+1	reviewed	p.S359	0.347	102	0%	87	51.7%	25	24%	-	-	-	HMMPfam_FYVE,HMMSmart_FYVE,superfamily_FYVE_PHD_ZnF
C10orf28	27291	genome.wustl.edu	37	10	99969100	99969100	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014472.4	+1	validated	p.R410Q	0.000	257	0%	89	58.4%	8	37.5%	benign(0.117)	tolerated(0.19)	neutral(0.059)	NULL
C10orf28	27291	genome.wustl.edu	37	10	99991445	99991445	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014472.4	+1	validated	e2+1	1.000	263	0%	92	37%	0	-	-	-	-	-
LOXL4	84171	genome.wustl.edu	37	10	100015468	100015468	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032211.6	-1	reviewed	p.R486M	0.707	10	0%	16	56.2%	5	20%	possibly_damaging(0.649)	deleterious(0.04)	deleterious(0.577)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
HPSE2	60495	genome.wustl.edu	37	10	100249938	100249938	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021828.4	-1	reviewed	p.L446I	1.000	44	0%	29	51.7%	0	-	probably_damaging(0.99)	tolerated(0.06)	deleterious(0.764)	NULL
HPSE2	60495	genome.wustl.edu	37	10	100481490	100481490	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021828.4	-1	reviewed	p.R294	1.000	65	0%	28	50%	0	-	-	-	-	HMMPfam_Glyco_hydro_79n
HPSE2	60495	genome.wustl.edu	37	10	100503702	100503702	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021828.4	-1	reviewed	p.A241D	1.000	165	0%	83	48.2%	0	-	possibly_damaging(0.805)	deleterious(0.01)	deleterious(0.709)	HMMPfam_Glyco_hydro_79n
HPSE2	60495	genome.wustl.edu	37	10	100995429	100995429	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021828.4	-1	reviewed	p.R44K	1.000	114	0%	62	43.5%	0	-	possibly_damaging(0.737)	deleterious(0)	deleterious(0.714)	NULL
GOT1	2805	genome.wustl.edu	37	10	101163385	101163385	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002079.2	-1	reviewed	p.R267K	0.999	37	0%	23	34.8%	44	40.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_AA_TRANSFER_CLASS_1,HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
GOT1	2805	genome.wustl.edu	37	10	101180424	101180424	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002079.2	-1	reviewed	p.R86H	0.704	66	0%	42	45.2%	62	41.9%	possibly_damaging(0.595)	deleterious(0)	deleterious(0.650)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
ENTPD7	57089	genome.wustl.edu	37	10	101439617	101439617	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020354.3	+1	validated	p.R178M	1.000	28	0%	19	26.3%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GDA1_CD39
ENTPD7	57089	genome.wustl.edu	37	10	101458520	101458520	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020354.3	+1	validated	p.E414K	1.000	83	1.2%	48	31.2%	11	27.2%	possibly_damaging(0.857)	tolerated(0.08)	deleterious(0.631)	HMMPfam_GDA1_CD39
CUTC	51076	genome.wustl.edu	37	10	101496056	101496056	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015960.2	+1	validated	p.V39M	0.998	305	0%	155	40%	11	18.1%	benign(0.051)	deleterious(0.03)	neutral(0.367)	HMMPfam_CutC,superfamily_CutC-like (Pfam 03932)
ABCC2	1244	genome.wustl.edu	37	10	101560152	101560152	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000392.3	+1	reviewed	p.I347	0.991	239	0%	129	36.4%	0	-	-	-	-	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC2	1244	genome.wustl.edu	37	10	101571341	101571341	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000392.3	+1	reviewed	p.S650L	0.000	158	0%	74	43.2%	0	-	benign(0)	tolerated(0.38)	neutral(0.018)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNMBP	23268	genome.wustl.edu	37	10	101646374	101646374	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015221.2	-1	validated	p.R1101W	1.000	20	5%	20	55%	3	0%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_BAR,HMMSmart_SM00721
DNMBP	23268	genome.wustl.edu	37	10	101715344	101715344	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015221.2	-1	validated	p.Q629H	0.226	36	0%	41	51.2%	0	-	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	NULL
DNMBP	23268	genome.wustl.edu	37	10	101716116	101716116	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015221.2	-1	validated	p.R372I	0.000	79	0%	74	44.6%	2	50%	benign(0.014)	tolerated(0.1)	neutral(0.287)	NULL
CPN1	1369	genome.wustl.edu	37	10	101814193	101814193	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001308.2	-1	reviewed	p.G341D	1.000	143	0%	77	33.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00631,superfamily_Carboxypeptidase regulatory domain,superfamily_Zn-dependent exopeptidases
PKD2L1	9033	genome.wustl.edu	37	10	102055987	102055987	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016112.2	-1	reviewed	p.G416	0.754	62	0%	30	33.3%	0	-	-	-	-	HMMPfam_PKD_channel,superfamily_Voltage-gated potassium channels
PKD2L1	9033	genome.wustl.edu	37	10	102055998	102055998	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016112.2	-1	reviewed	p.R413W	0.939	54	0%	28	57.1%	0	-	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	HMMPfam_PKD_channel,superfamily_Voltage-gated potassium channels
PKD2L1	9033	genome.wustl.edu	37	10	102089696	102089696	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016112.2	-1	reviewed	p.D55	0.010	58	0%	50	28%	0	-	-	-	-	NULL
SCD	6319	genome.wustl.edu	37	10	102116292	102116292	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005063.4	+1	validated	p.Y217	1.000	122	0%	94	41.5%	69	43.4%	-	-	-	HMMPfam_FA_desaturase
WNT8B	7479	genome.wustl.edu	37	10	102240818	102240818	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003393.3	+1	reviewed	p.R102I	0.973	110	0%	74	16.2%	1	0%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_wnt,HMMSmart_WNT1
SEC31B	25956	genome.wustl.edu	37	10	102257953	102257953	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015490.3	-1	reviewed	p.L566F	0.990	65	0%	49	34.7%	2	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SEC31B	25956	genome.wustl.edu	37	10	102262028	102262028	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015490.3	-1	reviewed	p.L465M	1.000	38	0%	16	37.5%	4	50%	benign(0.022)	tolerated(0.07)	neutral(0.320)	NULL
HIF1AN	55662	genome.wustl.edu	37	10	102296374	102296374	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017902.2	+1	validated	p.F128	0.998	101	0%	86	44.2%	16	50%	-	-	-	superfamily_SSF51197
SEMA4G	57715	genome.wustl.edu	37	10	102743535	102743535	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017893.2	+1	reviewed	p.G727R	1.000	9	0.000	14	0.643	32	75%	possibly_damaging(0.578)	deleterious(0)	deleterious(0.643)	NULL
C10orf2	56652	genome.wustl.edu	37	10	102749058	102749058	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021830.4	+1	reviewed	p.H364R	1.000	19	0%	19	31.6%	9	77.7%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
PDZD7	79955	genome.wustl.edu	37	10	102782016	102782016	+	Silent	SNP	G	G	A	rs185340346	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024895.3	-1	provisional	p.G223	1.000	45	0%	62	22.6%	1	100%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
DPCD	25911	genome.wustl.edu	37	10	103348139	103348139	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015448.1	+1	provisional	p.T16A	1.000	13	7.7%	24	37.5%	109	44.9%	possibly_damaging(0.857)	-	-	NULL
FBXW4	6468	genome.wustl.edu	37	10	103371165	103371165	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022039.3	-1	reviewed	p.A374	1.000	31	0%	27	51.9%	89	42.6%	-	-	-	superfamily_WD40_like
KCNIP2	30819	genome.wustl.edu	37	10	103599591	103599591	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173194.2	-1	reviewed	p.R3*	0.968	15	0%	17	47.1%	0	-	-	-	-	NULL
LDB1	8861	genome.wustl.edu	37	10	103869198	103869198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113407.1	-1	validated	p.R267C	1.000	37	0%	55	41.8%	120	33.3%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_LIM_bind
PPRC1	23082	genome.wustl.edu	37	10	103907016	103907016	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015062.3	+1	reviewed	p.R1423*	0.849	23	0%	15	46.7%	19	10.5%	-	-	-	NULL
NOLC1	9221	genome.wustl.edu	37	10	103919270	103919270	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004741.3	+1	validated	p.E268D	0.986	259	0%	154	42.9%	59	35.5%	unknown(0)	tolerated(0.28)	-	NULL
ELOVL3	83401	genome.wustl.edu	37	10	103987500	103987500	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152310.1	+1	provisional	p.C73	0.869	94	0%	66	45.5%	0	-	-	-	-	HMMPfam_ELO
ELOVL3	83401	genome.wustl.edu	37	10	103988814	103988814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152310.1	+1	provisional	p.Q206H	1.000	97	0%	82	42.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ELO
GBF1	8729	genome.wustl.edu	37	10	104136437	104136437	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004193.1	+1	provisional	p.L1389	1.000	38	0%	34	41.2%	70	37.1%	-	-	-	NULL
PSD	5662	genome.wustl.edu	37	10	104173561	104173561	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002779.3	-1	provisional	p.E506D	0.999	10	0%	17	52.9%	0	-	probably_damaging(0.99)	tolerated(0.14)	deleterious(0.691)	NULL
TMEM180	79847	genome.wustl.edu	37	10	104233474	104233474	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024789.3	+1	validated	p.S358I	0.614	46	0%	52	19.2%	4	0%	benign(0.008)	tolerated(0.39)	neutral(0.016)	superfamily_MFS_gen_substrate_transporter
SUFU	51684	genome.wustl.edu	37	10	104359284	104359284	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441466	+1	known	p.R230C	1.000	30	0%	29	44.8%	14	50%	-	-	-	HMMPfam_SUFU
CNNM2	54805	genome.wustl.edu	37	10	104679712	104679712	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017649.3	+1	validated	p.V492A	1.000	110	0%	88	12.5%	3	33.3%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_CBS
NT5C2	22978	genome.wustl.edu	37	10	104865540	104865540	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134373.1	-1	validated	p.T104	0.299	222	0%	102	11.8%	24	16.6%	-	-	-	NULL
LOC729020	729020	genome.wustl.edu	37	10	105006345	105006345	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143909.1	+1	provisional	p.S198G	1.000	239	0%	153	37.3%	0	-	-	-	-	HMMPfam_Ribul_P_3_epim,superfamily_RibP_bind_barrel
INA	9118	genome.wustl.edu	37	10	105046812	105046812	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032727.3	+1	reviewed	p.E362D	1.000	112	0%	60	48.3%	5	80%	benign(0.022)	tolerated(0.13)	neutral(0.254)	HMMPfam_Filament
PDCD11	22984	genome.wustl.edu	37	10	105184801	105184801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014976.1	+1	validated	p.A942S	0.996	59	0%	40	50%	15	13.3%	probably_damaging(0.978)	tolerated(0.08)	deleterious(0.720)	NULL
CALHM1	255022	genome.wustl.edu	37	10	105218161	105218161	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001412.3	-1	reviewed	p.A116	0.026	4	0.000	8	0.875	0	-	-	-	-	NULL
SH3PXD2A	9644	genome.wustl.edu	37	10	105363096	105363096	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014631.2	-1	validated	p.P599S	1.000	21	0%	15	46.7%	12	33.3%	benign(0.309)	tolerated(0.06)	neutral(0.419)	NULL
SH3PXD2A	9644	genome.wustl.edu	37	10	105484063	105484063	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000420222	-1	known	p.R76*	1.000	20	0%	22	40.9%	1	0%	-	-	-	HMMPfam_PX,superfamily_PX domain
OBFC1	79991	genome.wustl.edu	37	10	105664891	105664893	+	In_Frame_Del	DEL	TTA	TTA	-	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	TTA	TTA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024928.4	-1	validated	p.I84in_frame_del	1.000:1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_tRNA_anti,superfamily_Nucleic_acid_OB
COL17A1	1308	genome.wustl.edu	37	10	105794080	105794080	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000494.3	-1	reviewed	p.R1260H	0.998	9	0.000	8	0.750	2	50%	unknown(0)	tolerated(0.06)	-	NULL
COL17A1	1308	genome.wustl.edu	37	10	105813871	105813871	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000494.3	-1	reviewed	p.R584*	0.108	56	0%	47	46.8%	2	0%	-	-	-	HMMPfam_Collagen
COL17A1	1308	genome.wustl.edu	37	10	105837200	105837200	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000494.3	-1	reviewed	p.S61I	1.000	83	0%	65	56.9%	3	100%	unknown(0)	deleterious(0)	-	NULL
SFR1	119392	genome.wustl.edu	37	10	105885445	105885445	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002759.1	+1	validated	p.E241*	1.000	176	0%	78	46.2%	3	33.3%	-	-	-	NULL
WDR96	80217	genome.wustl.edu	37	10	105944846	105944846	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000434629	-1	known	p.E51*	0.033	300	0%	187	44.9%	0	-	benign(0.059)	tolerated(0.19)	neutral(0.054)	NULL
CCDC147	159686	genome.wustl.edu	37	10	106207548	106207548	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008723.1	+1	validated	p.T783	0.000	18	0%	14	64.3%	0	-	-	-	-	NULL
SORCS3	22986	genome.wustl.edu	37	10	106865193	106865193	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014978.1	+1	reviewed	p.E378K	0.994	89	1.1%	36	61.1%	0	-	probably_damaging(0.999)	tolerated(0.25)	deleterious(0.527)	HMMSmart_VPS10,superfamily_SSF110296
SORCS3	22986	genome.wustl.edu	37	10	106865241	106865241	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014978.1	+1	reviewed	p.L394M	0.997	89	0%	35	37.1%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMSmart_VPS10,superfamily_SSF110296
SORCS3	22986	genome.wustl.edu	37	10	106916995	106916995	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014978.1	+1	reviewed	p.Q528*	1.000	72	0%	35	48.6%	0	-	-	-	-	HMMSmart_VPS10,superfamily_SSF110296
SORCS3	22986	genome.wustl.edu	37	10	106961003	106961003	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014978.1	+1	reviewed	p.D751E	0.997	84	1.2%	32	43.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_VPS10
SORCS1	114815	genome.wustl.edu	37	10	108366987	108366987	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000452214	-1	known	p.S49Y	1.000	68	0%	32	37.5%	0	-	-	-	-	NULL
SORCS1	114815	genome.wustl.edu	37	10	108389033	108389033	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013031.1	-1	reviewed	p.G863	1.000	56	0%	29	37.9%	1	0%	-	-	-	HMMPfam_PKD,HMMSmart_PKD,superfamily_PKD
XPNPEP1	7511	genome.wustl.edu	37	10	111648339	111648339	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020383.3	-1	reviewed	p.P101S	1.000	47	0%	27	44.4%	55	38.1%	benign(0.172)	deleterious(0)	neutral(0.460)	NULL
ADD3	120	genome.wustl.edu	37	10	111893147	111893147	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016824.3	+1	reviewed	p.G631D	1.000	79	0%	45	42.2%	54	42.5%	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	NULL
RBM20	282996	genome.wustl.edu	37	10	112572354	112572354	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134363.1	+1	reviewed	p.H733	1.000	27	0%	23	56.5%	0	-	-	-	-	NULL
RBM20	282996	genome.wustl.edu	37	10	112581648	112581648	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134363.1	+1	reviewed	p.E1091K	0.806	57	0%	34	55.9%	0	-	possibly_damaging(0.608)	deleterious(0)	deleterious(0.655)	NULL
GPAM	57678	genome.wustl.edu	37	10	113932810	113932810	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020918.4	-1	validated	p.V192A	1.000	326	0%	127	43.3%	2	50%	probably_damaging(0.971)	deleterious(0.01)	deleterious(0.819)	superfamily_SSF69593
ACSL5	51703	genome.wustl.edu	37	10	114169369	114169369	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016234.3	+1	reviewed	p.D269N	1.000	138	0%	45	48.9%	12	25%	possibly_damaging(0.703)	tolerated(0.11)	deleterious(0.524)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSL5	51703	genome.wustl.edu	37	10	114170364	114170364	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016234.3	+1	reviewed	p.S312N	0.986	123	0%	69	39.1%	16	43.7%	benign(0.007)	deleterious(0.02)	neutral(0.383)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSL5	51703	genome.wustl.edu	37	10	114181725	114181725	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016234.3	+1	reviewed	p.A526T	0.000	123	0%	90	15.6%	22	9%	benign(0.001)	tolerated(0.08)	neutral(0.300)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
HABP2	3026	genome.wustl.edu	37	10	115340370	115340370	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004132.3	+1	reviewed	p.E253K	0.793	94	0%	60	30%	0	-	benign(0)	tolerated(0.67)	neutral(0.003)	HMMPfam_Kringle,HMMSmart_SM00130,superfamily_Kringle-like,PatternScan_KRINGLE_1
NRAP	4892	genome.wustl.edu	37	10	115348781	115348781	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198060.2	-1	validated	p.A1716T	1.000	106	0%	83	59%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NRAP	4892	genome.wustl.edu	37	10	115350603	115350603	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198060.2	-1	validated	p.G1564R	1.000	65	0%	41	12.2%	1	0%	benign(0.146)	deleterious(0.01)	neutral(0.418)	NULL
NRAP	4892	genome.wustl.edu	37	10	115406696	115406696	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198060.2	-1	validated	p.E327K	1.000	115	0%	61	41%	0	-	possibly_damaging(0.932)	tolerated(0.34)	neutral(0.402)	HMMPfam_Nebulin,HMMSmart_SM00227
CASP7	840	genome.wustl.edu	37	10	115451782	115451782	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033338.4	+1	reviewed	p.T18A	0.362	67	0%	35	31.4%	3	33.3%	unknown(0)	-	-	NULL
C10orf81	79949	genome.wustl.edu	37	10	115533997	115533997	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000369310	+1	known	p.I222	0.000	295	0%	126	34.9%	1	0%	-	-	-	NULL
DCLRE1A	9937	genome.wustl.edu	37	10	115609551	115609551	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014881.3	-1	provisional	p.A438V	0.005	188	0%	148	41.2%	5	60%	benign(0.014)	tolerated(0.15)	neutral(0.241)	NULL
ADRB1	153	genome.wustl.edu	37	10	115804330	115804330	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000684.2	+1	reviewed	p.E147K	1.000	9	0.000	8	0.500	4	50%	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
C10orf118	55088	genome.wustl.edu	37	10	115885860	115885860	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018017.2	-1	validated	p.I800V	1.000	179	0%	62	41.9%	0	-	probably_damaging(0.987)	tolerated(0.22)	deleterious(0.478)	NULL
C10orf118	55088	genome.wustl.edu	37	10	115889665	115889665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018017.2	-1	validated	p.R723C	1.000	219	0%	82	46.3%	6	16.6%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
C10orf118	55088	genome.wustl.edu	37	10	115891901	115891901	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000428953	-1	known	p.S195P	1.000	305	0%	85	40%	5	40%	-	-	-	superfamily_Prefoldin
C10orf118	55088	genome.wustl.edu	37	10	115905444	115905444	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018017.2	-1	validated	p.S322Y	1.000	976	0%	351	39.9%	3	33.3%	possibly_damaging(0.906)	tolerated(0.16)	neutral(0.419)	NULL
C10orf118	55088	genome.wustl.edu	37	10	115905496	115905496	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018017.2	-1	validated	p.R305C	1.000	683	0.3%	284	43%	9	77.7%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
TDRD1	56165	genome.wustl.edu	37	10	115947627	115947627	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198795.1	+1	reviewed	p.N13H	1.000	203	0%	104	38.5%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
AFAP1L2	84632	genome.wustl.edu	37	10	116073685	116073685	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001936.1	-1	validated	p.A246V	0.989	45	0%	40	37.5%	11	27.2%	probably_damaging(0.96)	deleterious(0.03)	deleterious(0.768)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ABLIM1	3983	genome.wustl.edu	37	10	116225565	116225565	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002313.5	-1	reviewed	p.R445W	1.000	84	1.2%	61	37.7%	51	45%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
FAM160B1	57700	genome.wustl.edu	37	10	116615073	116615073	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020940.3	+1	validated	p.D641N	1.000	260	0.8%	130	38.5%	3	33.3%	benign(0.001)	tolerated(0.42)	neutral(0.014)	NULL
ATRNL1	26033	genome.wustl.edu	37	10	117040896	117040896	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207303.2	+1	validated	p.R711I	1.000	154	0%	58	31%	0	-	probably_damaging(0.976)	tolerated(0.2)	neutral(0.467)	NULL
PNLIPRP3	119548	genome.wustl.edu	37	10	118225641	118225641	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001011709.2	+1	validated	p.F296L	0.078	609	0%	263	40.3%	0	-	benign(0.393)	deleterious(0.01)	deleterious(0.532)	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
PNLIP	5406	genome.wustl.edu	37	10	118315012	118315012	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000936.2	+1	reviewed	p.I268	1.000	250	0%	103	36.9%	0	-	-	-	-	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
PNLIPRP2	5408	genome.wustl.edu	37	10	118386478	118386478	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005396.4	+1	validated	p.R146W	0.991	140	0.7%	136	42.6%	0	-	probably_damaging(0.962)	deleterious(0.03)	deleterious(0.770)	NULL
C10orf82	143379	genome.wustl.edu	37	10	118423728	118423728	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000388884	-1	known	p.Q172H	0.003	100	0%	45	17.8%	0	-	benign(0.348)	tolerated(0.15)	neutral(0.351)	NULL
KIAA1598	57698	genome.wustl.edu	37	10	118645923	118645923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127211.1	-1	validated	p.E610K	0.000	567	0%	308	42.2%	30	43.3%	benign(0)	deleterious(0)	neutral(0.445)	NULL
VAX1	11023	genome.wustl.edu	37	10	118891963	118891963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199131.2	-1	reviewed	p.R152Q	0.995	214	0%	141	39.7%	0	-	unknown(0)	deleterious(0)	-	HMMSmart_SM00389
KCNK18	338567	genome.wustl.edu	37	10	118969536	118969536	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181840.1	+1	provisional	p.I294T	0.999	220	0%	155	46.5%	0	-	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	HMMPfam_Ion_trans_2,superfamily_SSF81324
PDZD8	118987	genome.wustl.edu	37	10	119042849	119042849	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173791.3	-1	provisional	p.S1132N	0.998	439	0%	153	43.8%	22	50%	benign(0.004)	tolerated(0.17)	neutral(0.059)	NULL
EIF3A	8661	genome.wustl.edu	37	10	120801663	120801663	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003750.2	-1	validated	p.A1123	0.000	95	0%	81	50.6%	177	48%	-	-	-	NULL
EIF3A	8661	genome.wustl.edu	37	10	120802004	120802004	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003750.2	-1	validated	p.R1010C	1.000	96	0%	91	44%	162	48.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM45A	404636	genome.wustl.edu	37	10	120867532	120867532	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207009.2	+1	validated	p.T36	1.000	218	0%	139	43.2%	13	53.8%	-	-	-	NULL
FAM45A	404636	genome.wustl.edu	37	10	120896139	120896139	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207009.2	+1	validated	p.E352K	0.999	198	0%	112	32.1%	14	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GRK5	2869	genome.wustl.edu	37	10	121214503	121214503	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005308.2	+1	reviewed	p.S566L	0.993	138	0%	120	51.7%	4	50%	unknown(0)	tolerated(0.24)	-	NULL
GRK5	2869	genome.wustl.edu	37	10	121214768	121214768	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000457057	+1	known	p.P371S	0.005	8	0.000	12	0.417	2	50%	unknown(0)	-	-	NULL
RGS10	6001	genome.wustl.edu	37	10	121259737	121259737	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005339.1	-1	reviewed	p.R145H	1.000	285	0%	189	48.1%	155	48.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
TIAL1	7073	genome.wustl.edu	37	10	121336662	121336662	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033925.1	-1	reviewed	p.T281M	1.000	224	0%	119	37.8%	64	40.6%	possibly_damaging(0.555)	tolerated(0.09)	deleterious(0.486)	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
INPP5F	22876	genome.wustl.edu	37	10	121564923	121564923	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014937.2	+1	reviewed	p.Q423	0.979	495	0%	257	11.3%	2	0%	-	-	-	NULL
INPP5F	22876	genome.wustl.edu	37	10	121567498	121567498	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014937.2	+1	reviewed	p.R499C	1.000	113	0%	37	48.6%	7	14.2%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	NULL
MCMBP	79892	genome.wustl.edu	37	10	121591010	121591010	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024834.2	-1	validated	p.K635N	0.735	138	0%	69	20.3%	70	21.4%	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	NULL
MCMBP	79892	genome.wustl.edu	37	10	121595140	121595140	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024834.2	-1	validated	p.A542V	0.007	108	0%	43	48.8%	58	39.6%	possibly_damaging(0.948)	tolerated(0.51)	neutral(0.400)	HMMPfam_DUF2044
WDR11	55717	genome.wustl.edu	37	10	122650367	122650367	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018117.11	+1	reviewed	p.A828V	0.645	231	0%	132	34.8%	14	7.1%	benign(0.036)	tolerated(0.12)	neutral(0.263)	NULL
FGFR2	2263	genome.wustl.edu	37	10	123310935	123310935	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022970.3	-1	reviewed	p.R165W	0.996	115	0%	91	45.1%	23	52.1%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_SSF48726
TACC2	10579	genome.wustl.edu	37	10	123844792	123844792	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206862.2	+1	reviewed	p.S926Y	0.005	64	0%	42	40.5%	4	50%	possibly_damaging(0.745)	deleterious(0.01)	deleterious(0.679)	NULL
TACC2	10579	genome.wustl.edu	37	10	123970859	123970859	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206862.2	+1	reviewed	p.T2307A	0.986	76	0%	65	52.3%	14	57.1%	benign(0)	tolerated(0.46)	neutral(0.012)	NULL
PLEKHA1	59338	genome.wustl.edu	37	10	124189332	124189332	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001974.1	+1	validated	p.E365*	1.000	121	0%	61	9.8%	39	10.2%	-	-	-	NULL
BUB3	9184	genome.wustl.edu	37	10	124922314	124922314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004725.3	+1	reviewed	p.R314H	1.000	139	0%	49	28.6%	172	30.2%	benign(0.206)	tolerated(0.06)	neutral(0.343)	superfamily_WD40 repeat-like
GPR26	2849	genome.wustl.edu	37	10	125434427	125434427	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153442.3	+1	validated	p.F254	1.000	50	0%	44	50%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
CHST15	51363	genome.wustl.edu	37	10	125805389	125805389	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015892.2	-1	validated	p.G114R	0.003	161	0%	122	45.9%	4	0%	benign(0.002)	deleterious(0.01)	neutral(0.406)	NULL
FAM175B	23172	genome.wustl.edu	37	10	126508011	126508011	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032182.3	+1	validated	p.R87W	1.000	585	0%	274	16.8%	10	10%	benign(0.274)	deleterious(0.01)	neutral(0.435)	NULL
CTBP2	1488	genome.wustl.edu	37	10	126678262	126678262	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022802.2	-1	reviewed	p.P928Q	1.000	36	0%	29	41.4%	95	49.4%	benign(0.008)	deleterious(0.03)	neutral(0.364)	NULL
C10orf122	387718	genome.wustl.edu	37	10	127350457	127350457	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128202.1	-1	validated	p.Q47	0.001	77	0%	50	42%	0	-	-	-	-	NULL
C10orf122	387718	genome.wustl.edu	37	10	127371546	127371546	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128202.1	-1	validated	p.R5*	0.484	136	0.7%	92	54.3%	0	-	-	-	-	NULL
MMP21	118856	genome.wustl.edu	37	10	127455503	127455503	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147191.1	-1	reviewed	p.R480*	0.007	335	0%	156	42.3%	0	-	-	-	-	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120
MMP21	118856	genome.wustl.edu	37	10	127464237	127464237	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147191.1	-1	reviewed	p.A52T	0.003	12	0%	17	47.1%	0	-	benign(0.005)	tolerated(0.43)	neutral(0.013)	HMMPfam_PG_binding_1,superfamily_PGBD-like
BCCIP	56647	genome.wustl.edu	37	10	127524715	127524715	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_078468.2	+1	reviewed	p.D273N	1.000	326	0%	180	12.8%	52	11.5%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
BCCIP	56647	genome.wustl.edu	37	10	127524805	127524805	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_078468.2	+1	reviewed	p.E303K	0.475	212	0%	114	47.4%	42	40.4%	benign(0.311)	tolerated(0.87)	neutral(0.098)	NULL
FANK1	92565	genome.wustl.edu	37	10	127668804	127668804	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145235.3	+1	validated	p.D30N	1.000	151	0%	77	33.8%	0	-	possibly_damaging(0.924)	tolerated(0.16)	neutral(0.432)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
ADAM12	8038	genome.wustl.edu	37	10	127731688	127731688	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003474.4	-1	reviewed	p.C678	0.752	40	2.5%	37	43.2%	7	0%	-	-	-	HMMPfam_EGF_2
ADAM12	8038	genome.wustl.edu	37	10	127789754	127789754	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003474.4	-1	reviewed	p.D269	0.712	100	1%	64	50%	1	0%	-	-	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAM12	8038	genome.wustl.edu	37	10	127797181	127797181	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003474.4	-1	reviewed	p.I244T	1.000	538	0%	184	35.9%	3	0%	possibly_damaging(0.61)	deleterious(0.01)	deleterious(0.617)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
C10orf90	118611	genome.wustl.edu	37	10	128193104	128193104	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004298.2	-1	validated	p.Y222C	0.000	41	0%	47	40.4%	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
FAM196A	642938	genome.wustl.edu	37	10	128952149	128952149	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039762.2	-1	validated	p.D408V	1.000	177	0.6%	67	26.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FAM196A	642938	genome.wustl.edu	37	10	128974189	128974189	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039762.2	-1	validated	p.E157	0.000	84	0%	87	48.3%	0	-	-	-	-	NULL
DOCK1	1793	genome.wustl.edu	37	10	129055661	129055661	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398025	+1	known	p.F1049	0.773	211	0.5%	108	50%	4	50%	-	-	-	NULL
DOCK1	1793	genome.wustl.edu	37	10	129141943	129141943	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398025	+1	known	p.F1098V	1.000	270	0%	166	10.2%	6	33.3%	possibly_damaging(0.943)	tolerated(0.05)	deleterious(0.733)	NULL
DOCK1	1793	genome.wustl.edu	37	10	129249602	129249602	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398025	+1	known	p.P1903T	1.000	71	0%	35	17.1%	29	17.2%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
MKI67	4288	genome.wustl.edu	37	10	129901014	129901014	+	Silent	SNP	C	C	T	rs181024034	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002417.4	-1	reviewed	p.K3030	0.000	101	0%	62	45.2%	16	75%	-	-	-	NULL
MKI67	4288	genome.wustl.edu	37	10	129904854	129904854	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002417.4	-1	reviewed	p.S1750R	0.000	471	0%	260	40.4%	13	30.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_K167R
MKI67	4288	genome.wustl.edu	37	10	129906134	129906134	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002417.4	-1	reviewed	p.E1324*	0.001	168	0%	128	41.4%	14	7.1%	-	-	-	HMMPfam_K167R
MKI67	4288	genome.wustl.edu	37	10	129914208	129914208	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002417.4	-1	reviewed	p.P155H	0.002	412	0%	199	36.7%	6	66.6%	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	NULL
MGMT	4255	genome.wustl.edu	37	10	131557571	131557571	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002412.3	+1	validated	p.A158V	0.733	59	0%	46	50%	52	44.2%	benign(0.19)	tolerated(0.81)	neutral(0.018)	HMMPfam_DNA_binding_1,superfamily_MethylDNA_cys_mtrans_DNA_bd
EBF3	253738	genome.wustl.edu	37	10	131761780	131761780	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005463.1	-1	validated	p.G48R	1.000	20	0%	20	55%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
GLRX3	10539	genome.wustl.edu	37	10	131959238	131959238	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006541.3	+1	provisional	p.G152E	0.999	95	0%	47	44.7%	61	59%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glutaredoxin,superfamily_Thiordxn-like_fd
TCERG1L	256536	genome.wustl.edu	37	10	132932642	132932642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174937.3	-1	validated	p.R420Q	0.999	164	0%	84	45.2%	0	-	possibly_damaging(0.883)	tolerated(0.07)	deleterious(0.664)	NULL
TCERG1L	256536	genome.wustl.edu	37	10	133107524	133107524	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174937.3	-1	validated	p.P127	0.528	112	0.9%	58	50%	0	-	-	-	-	NULL
JAKMIP3	282973	genome.wustl.edu	37	10	133967311	133967311	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105521.2	+1	provisional	p.V706M	1.000	26	0%	28	35.7%	0	-	possibly_damaging(0.449)	tolerated(1)	neutral(0.147)	NULL
LRRC27	80313	genome.wustl.edu	37	10	134174991	134174991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143757.1	+1	validated	p.L401M	0.003	139	0%	81	37%	6	0%	probably_damaging(0.989)	tolerated(0.12)	deleterious(0.700)	NULL
LRRC27	80313	genome.wustl.edu	37	10	134175055	134175055	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143757.1	+1	validated	p.S422L	0.000	142	0%	87	29.9%	8	50%	possibly_damaging(0.896)	deleterious(0.01)	deleterious(0.759)	NULL
PWWP2B	170394	genome.wustl.edu	37	10	134218152	134218152	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138499.3	+1	validated	p.P50T	0.481	33	0%	38	31.6%	13	30.7%	probably_damaging(0.991)	tolerated(1)	neutral(0.444)	NULL
TTC40	54777	genome.wustl.edu	37	10	134624471	134624471	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000368586	-1	known	p.E2522D	0.000	28	0%	24	41.7%	0	-	probably_damaging(0.99)	tolerated(0.14)	deleterious(0.691)	NULL
CYP2E1	1571	genome.wustl.edu	37	10	135352426	135352426	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000773.3	+1	reviewed	p.C480	0.000	175	0%	109	45%	4	75%	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
RIC8A	60626	genome.wustl.edu	37	11	209485	209485	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021932.4	+1	provisional	p.R71*	1.000	12	0%	22	68.2%	65	40%	-	-	-	HMMPfam_Ric8
SIRT3	23410	genome.wustl.edu	37	11	233450	233450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012239.5	-1	validated	p.K122N	0.263	102	0%	69	43.5%	9	0%	probably_damaging(0.983)	deleterious(0.03)	deleterious(0.793)	NULL
ATHL1	80162	genome.wustl.edu	37	11	294296	294296	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025092.4	+1	validated	p.P613H	0.996	23	0%	13	69.2%	8	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_65m,superfamily_Six-hairpin glycosidases
IFITM2	10581	genome.wustl.edu	37	11	309109	309109	+	Missense_Mutation	SNP	T	T	G	rs74901761		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006435.2	+1	validated	p.F115V	0.036	75	0%	73	37%	112	16%	benign(0)	tolerated(0.29)	neutral(0.029)	HMMPfam_CD225
LRRC56	115399	genome.wustl.edu	37	11	540759	540759	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198075.3	+1	validated	p.W25*	1.000	13	0.000	8	0.500	21	33.3%	-	-	-	NULL
PHRF1	57661	genome.wustl.edu	37	11	607431	607431	+	Missense_Mutation	SNP	C	C	T	rs192557368	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020901.2	+1	validated	p.R658C	0.000	18	0%	32	43.8%	36	36.1%	possibly_damaging(0.936)	deleterious(0)	deleterious(0.826)	NULL
PHRF1	57661	genome.wustl.edu	37	11	609173	609173	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020901.2	+1	validated	p.P1238	0.000	16	0%	10	50%	29	58.6%	-	-	-	NULL
CDHR5	53841	genome.wustl.edu	37	11	620066	620066	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021924.4	-1	reviewed	e9+1	0.976	20	0%	24	33.3%	0	-	-	-	-	-
EPS8L2	64787	genome.wustl.edu	37	11	724727	724727	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022772.3	+1	reviewed	p.G486	0.996	21	0%	25	64%	56	53.5%	-	-	-	superfamily_SH3-domain
PNPLA2	57104	genome.wustl.edu	37	11	823779	823779	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020376.2	+1	provisional	p.S281	0.118	5	0.000	10	0.400	65	40%	-	-	-	NULL
EFCAB4A	283229	genome.wustl.edu	37	11	829510	829510	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173584.3	+1	validated	p.E143G	1.000	8	0.000	9	0.556	44	47.7%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
CHID1	66005	genome.wustl.edu	37	11	883207	883207	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142676.1	-1	validated	p.N325K	1.000	25	0%	17	64.7%	98	38.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_18,HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat
CHID1	66005	genome.wustl.edu	37	11	900105	900105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142676.1	-1	validated	p.R174W	1.000	37	0%	59	47.5%	129	49.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat
AP2A2	161	genome.wustl.edu	37	11	986946	986946	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012305.2	+1	validated	p.A375V	1.000	19	0%	19	57.9%	54	44.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Adaptin_N,superfamily_ARM repeat
AP2A2	161	genome.wustl.edu	37	11	1006531	1006531	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012305.2	+1	validated	p.R737Q	1.000	662	0%	423	40.4%	38	42.1%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,superfamily_Clathrin adaptor appendage domain
MUC6	4588	genome.wustl.edu	37	11	1028728	1028728	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005961.2	-1	validated	p.F503	0.795	13	0%	16	31.2%	0	-	-	-	-	HMMPfam_VWD,HMMSmart_SM00216
MUC2	4583	genome.wustl.edu	37	11	1085743	1085743	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002457.2	+1	reviewed	e21-1	1.000	18	0%	15	46.7%	0	-	-	-	-	-
MUC5B	727897	genome.wustl.edu	37	11	1155614	1155614	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000406844	+1	known	p.G101D	0.949	14	0%	12	33.3%	0	-	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_VWD,HMMSmart_SM00216
MUC5B	727897	genome.wustl.edu	37	11	1263325	1263325	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002458.1	+1	validated	p.E1742K	0.000	23	0%	20	50%	0	-	benign(0.014)	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1266354	1266354	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002458.1	+1	validated	p.P2751	0.000	149	0.7%	177	31.1%	0	-	-	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1266589	1266589	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002458.1	+1	validated	p.T2830A	0.000	90	0%	89	29.2%	1	0%	unknown(0)	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1266797	1266797	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002458.1	+1	validated	p.D2899V	0.290	35	0%	49	20.4%	0	-	unknown(0)	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1272560	1272560	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002458.1	+1	validated	p.R4820Q	0.000	27	0%	48	91.7%	0	-	unknown(0)	-	-	NULL
BRSK2	9024	genome.wustl.edu	37	11	1466606	1466606	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003957.2	+1	validated	p.D299N	1.000	8	0.000	10	0.400	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Kinase_like
KRTAP5-3	387266	genome.wustl.edu	37	11	1629151	1629151	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012708.2	-1	validated	p.C155	0.966	39	0%	55	36.4%	0	-	-	-	-	PatternScan_VWFC_1
KRTAP5-4	387267	genome.wustl.edu	37	11	1642666	1642666	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012709.1	-1	provisional	p.V220I	0.809	78	1.3%	64	35.9%	0	-	unknown(0)	tolerated(0.23)	-	NULL
TNNT3	7140	genome.wustl.edu	37	11	1955883	1955883	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006757.3	+1	reviewed	p.L196	1.000	16	0%	11	63.6%	0	-	-	-	-	HMMPfam_Troponin
C11orf21	29125	genome.wustl.edu	37	11	2320837	2320837	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142946.1	-1	predicted	p.A129V	0.004	44	0%	36	25%	0	-	possibly_damaging(0.86)	-	-	NULL
KCNQ1	3784	genome.wustl.edu	37	11	2604727	2604727	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000218.2	+1	reviewed	p.I328	0.971	68	0%	63	36.5%	9	55.5%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
KCNQ1	3784	genome.wustl.edu	37	11	2608803	2608803	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000218.2	+1	reviewed	p.A378T	0.655	14	0%	16	50%	6	50%	benign(0.006)	tolerated(0.29)	neutral(0.029)	NULL
NAP1L4	4676	genome.wustl.edu	37	11	2997259	2997259	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005969.3	-1	reviewed	p.I56	0.958	106	0%	59	64.4%	81	50.6%	-	-	-	NULL
CARS	833	genome.wustl.edu	37	11	3039965	3039965	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014437.1	-1	reviewed	p.N470	0.967	256	0%	170	34.7%	39	51.2%	-	-	-	HMMPfam_tRNA-synt_1e,superfamily_SSF52374
CARS	833	genome.wustl.edu	37	11	3040443	3040443	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014437.1	-1	reviewed	p.A441T	1.000	16	0%	19	52.6%	43	44.1%	benign(0.001)	tolerated(0.15)	neutral(0.241)	HMMPfam_tRNA-synt_1e,superfamily_SSF52374
ZNF195	7748	genome.wustl.edu	37	11	3380494	3380494	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130520.1	-1	validated	p.E582K	0.035	291	0%	101	48.5%	14	50%	possibly_damaging(0.489)	tolerated(0.09)	neutral(0.459)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF195	7748	genome.wustl.edu	37	11	3380915	3380915	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130520.1	-1	validated	p.D441	0.001	188	0%	80	42.5%	15	60%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
NUP98	4928	genome.wustl.edu	37	11	3697439	3697439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016320.4	-1	reviewed	p.R1785C	1.000	20	0%	21	33.3%	96	47.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PGAP2	27315	genome.wustl.edu	37	11	3846320	3846320	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014489.2	+1	validated	p.A260D	1.000	111	0%	99	51.5%	62	56.4%	possibly_damaging(0.846)	deleterious(0.02)	deleterious(0.708)	HMMPfam_Frag1
RHOG	391	genome.wustl.edu	37	11	3848963	3848963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001665.3	-1	validated	p.P136S	1.000	9	0.000	14	0.357	73	13.6%	probably_damaging(0.959)	deleterious(0.02)	deleterious(0.786)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
OR52M1	119772	genome.wustl.edu	37	11	4566905	4566905	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004137.1	+1	validated	p.P162H	0.001	92	0%	49	36.7%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_7tm_1,superfamily_SSF81321
OR52R1	119695	genome.wustl.edu	37	11	4824901	4824901	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005177.3	-1	validated	p.R316H	0.001	37	0%	24	37.5%	0	-	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR52R1	119695	genome.wustl.edu	37	11	4825788	4825788	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005177.3	-1	validated	p.C20W	0.000	128	0%	33	39.4%	0	-	benign(0.006)	-	-	NULL
OR51S1	119692	genome.wustl.edu	37	11	4870390	4870390	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004758.1	-1	provisional	p.A17T	0.149	109	0%	48	43.8%	0	-	benign(0.02)	tolerated(0.39)	neutral(0.017)	PatternScan_SPASE_I_1,superfamily_Family A G protein-coupled receptor-like
OR51A7	119687	genome.wustl.edu	37	11	4929267	4929267	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004749.1	+1	provisional	p.T223I	0.906	218	0%	85	38.8%	0	-	benign(0.003)	deleterious(0.01)	neutral(0.406)	HMMPfam_7tm_1,superfamily_SSF81321
OR51G1	79324	genome.wustl.edu	37	11	4945266	4945266	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005237.1	-1	provisional	p.Q102*	0.999	47	0%	20	35%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
MMP26	56547	genome.wustl.edu	37	11	5009490	5009490	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021801.3	+1	reviewed	p.A17T	0.002	128	0%	123	41.5%	0	-	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
OR52J3	119679	genome.wustl.edu	37	11	5067884	5067884	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001916.2	+1	validated	p.G43	0.877	136	0%	67	47.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR52A4	390053	genome.wustl.edu	37	11	5142346	5142346	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005222.2	-1	validated	p.R155W	0.000	27	0%	10	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR52A5	390054	genome.wustl.edu	37	11	5153226	5153226	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005160.2	-1	validated	p.F216C	0.003	106	0%	75	44%	0	-	possibly_damaging(0.823)	tolerated(0.39)	neutral(0.328)	HMMPfam_7tm_1,superfamily_SSF81321
OR52A1	23538	genome.wustl.edu	37	11	5173331	5173331	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012375.2	-1	validated	p.N90I	0.001	85	0%	55	38.2%	0	-	benign(0.277)	deleterious(0.03)	neutral(0.394)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
HBB	3043	genome.wustl.edu	37	11	5247912	5247912	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000518.4	-1	reviewed	p.G70	0.006	52	0%	45	26.7%	25	0%	-	-	-	HMMPfam_Globin,superfamily_Globin-like
OR51B2	79345	genome.wustl.edu	37	11	5345053	5345053	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033180.4	-1	validated	p.L159V	0.000	142	0%	42	54.8%	0	-	benign(0.001)	tolerated(0.37)	neutral(0.019)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR51M1	390059	genome.wustl.edu	37	11	5411481	5411481	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004756.2	+1	validated	p.H285N	0.014	35	0%	31	51.6%	0	-	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR51Q1	390061	genome.wustl.edu	37	11	5443538	5443538	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004757.2	+1	validated	p.L36	0.980	94	0%	88	12.5%	0	-	-	-	-	superfamily_SSF81321
OR51Q1	390061	genome.wustl.edu	37	11	5443684	5443684	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004757.2	+1	validated	p.Q85R	0.000	129	0%	105	44.8%	0	-	benign(0)	tolerated(0.43)	neutral(0.013)	HMMPfam_7tm_1,superfamily_SSF81321
UBQLNL	143630	genome.wustl.edu	37	11	5536961	5536961	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145053.4	-1	validated	p.E237D	1.000	42	0%	32	43.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
OR56B1	387748	genome.wustl.edu	37	11	5758345	5758345	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005180.1	+1	provisional	p.D200G	0.995	110	0%	57	19.3%	0	-	benign(0.182)	deleterious(0.02)	neutral(0.400)	HMMPfam_7tm_1,superfamily_SSF81321
OR52N5	390075	genome.wustl.edu	37	11	5799474	5799474	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001922.2	-1	validated	p.R131S	1.000	96	0%	43	20.9%	0	-	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
OR52N1	79473	genome.wustl.edu	37	11	5809097	5809097	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001913.1	-1	provisional	p.S317F	0.012	133	0%	54	44.4%	0	-	benign(0.001)	deleterious(0.01)	neutral(0.406)	NULL
OR52N2	390077	genome.wustl.edu	37	11	5842059	5842059	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005174.1	+1	provisional	p.T165I	0.001	208	0%	119	45.4%	0	-	benign(0)	tolerated(0.93)	-	HMMPfam_7tm_1,superfamily_SSF81321
OR52E6	390078	genome.wustl.edu	37	11	5862477	5862477	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005167.1	-1	provisional	p.L217	0.006	74	0%	29	17.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR52E8	390079	genome.wustl.edu	37	11	5878554	5878554	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005168.1	-1	provisional	p.D127N	1.000	103	0%	39	25.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
OR52E4	390081	genome.wustl.edu	37	11	5906312	5906312	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005165.1	+1	provisional	p.R264C	0.000	371	0%	84	40.5%	0	-	probably_damaging(0.986)	deleterious(0.02)	deleterious(0.818)	HMMPfam_7tm_1,superfamily_SSF81321
OR56A3	390083	genome.wustl.edu	37	11	5968615	5968615	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003443.2	+1	provisional	p.A13	0.974	153	0%	92	40.2%	0	-	-	-	-	superfamily_SSF81321
OR56A4	120793	genome.wustl.edu	37	11	6023766	6023766	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005179.2	-1	provisional	p.A205S	0.001	36	0%	34	11.8%	0	-	benign(0.004)	tolerated(0.15)	neutral(0.241)	HMMPfam_7tm_1,superfamily_SSF81321
OR56B4	196335	genome.wustl.edu	37	11	6129497	6129497	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005181.1	+1	provisional	p.I163	0.904	80	0%	52	21.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
CNGA4	1262	genome.wustl.edu	37	11	6260476	6260476	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037329.2	+1	validated	p.P14S	0.167	85	0%	86	40.7%	0	-	possibly_damaging(0.67)	tolerated(0.69)	neutral(0.239)	NULL
CNGA4	1262	genome.wustl.edu	37	11	6261661	6261661	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037329.2	+1	validated	p.R213C	0.998	12	0.000	7	0.714	0	-	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
APBB1	322	genome.wustl.edu	37	11	6423908	6423908	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001164.2	-1	reviewed	p.E384	1.000	27	0%	28	57.1%	5	0%	-	-	-	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
HPX	3263	genome.wustl.edu	37	11	6461738	6461738	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000613.2	-1	reviewed	p.A58V	1.000	112	0%	75	54.7%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX
TRIM3	10612	genome.wustl.edu	37	11	6478579	6478579	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006458.2	-1	reviewed	p.R215C	1.000	21	0%	16	43.8%	12	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00502
DNHD1	144132	genome.wustl.edu	37	11	6519559	6519559	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173589.3	+1	validated	p.C38	0.000	18	0%	18	50%	1	0%	-	-	-	NULL
DNHD1	144132	genome.wustl.edu	37	11	6567151	6567151	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144666.2	+1	provisional	p.L1661P	0.760	47	0%	42	38.1%	2	50%	probably_damaging(0.995)	deleterious(0.05)	deleterious(0.803)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNHD1	144132	genome.wustl.edu	37	11	6578983	6578983	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144666.2	+1	provisional	p.V2820I	0.719	73	0%	48	54.2%	0	-	possibly_damaging(0.529)	deleterious(0)	deleterious(0.623)	NULL
DNHD1	144132	genome.wustl.edu	37	11	6585809	6585809	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144666.2	+1	provisional	p.L3511	0.002	103	0%	86	45.3%	0	-	-	-	-	NULL
DNHD1	144132	genome.wustl.edu	37	11	6588139	6588139	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144666.2	+1	provisional	p.T3800	0.014	43	0%	38	52.6%	0	-	-	-	-	NULL
DNHD1	144132	genome.wustl.edu	37	11	6588485	6588485	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144666.2	+1	provisional	p.R3916C	0.995	17	0%	18	66.7%	0	-	probably_damaging(0.994)	tolerated(0.06)	deleterious(0.774)	NULL
DNHD1	144132	genome.wustl.edu	37	11	6593183	6593183	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144666.2	+1	provisional	p.R4743	1.000	28	0%	42	42.9%	2	50%	-	-	-	HMMPfam_Dynein_heavy
DCHS1	8642	genome.wustl.edu	37	11	6646628	6646628	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003737.2	-1	reviewed	p.S2316Y	0.913	30	0%	39	48.7%	7	0%	probably_damaging(0.993)	tolerated(0.11)	deleterious(0.722)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
DCHS1	8642	genome.wustl.edu	37	11	6646875	6646875	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003737.2	-1	reviewed	p.D2272G	1.000	13	0%	18	61.1%	10	40%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
DCHS1	8642	genome.wustl.edu	37	11	6653810	6653810	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003737.2	-1	reviewed	p.R978H	1.000	7	0.000	13	0.538	1	100%	probably_damaging(0.993)	tolerated(0.16)	deleterious(0.510)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
OR10A5	144124	genome.wustl.edu	37	11	6867511	6867511	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178168.1	+1	provisional	p.A200T	0.001	142	0%	101	20.8%	0	-	probably_damaging(0.973)	tolerated(0.27)	neutral(0.449)	HMMPfam_7tm_1,superfamily_SSF81321
OR2D3	120775	genome.wustl.edu	37	11	6943085	6943085	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004684.1	+1	provisional	p.E285K	0.024	184	0%	100	42%	0	-	benign(0)	tolerated(0.29)	neutral(0.029)	HMMPfam_7tm_1,superfamily_SSF81321
ZNF214	7761	genome.wustl.edu	37	11	7021995	7021995	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013249.2	-1	validated	p.A307T	0.000	216	0%	50	36%	0	-	benign(0)	tolerated(0.38)	neutral(0.018)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
NLRP14	338323	genome.wustl.edu	37	11	7064444	7064444	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176822.3	+1	reviewed	p.T396I	0.283	81	0%	53	39.6%	0	-	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	NULL
RBMXL2	27288	genome.wustl.edu	37	11	7110449	7110449	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014469.4	+1	reviewed	p.R33H	0.816	13	0%	21	23.8%	1	0%	possibly_damaging(0.592)	tolerated(0.36)	neutral(0.224)	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
SYT9	143425	genome.wustl.edu	37	11	7437358	7437358	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175733.3	+1	validated	p.R377M	1.000	144	0%	88	48.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
OLFML1	283298	genome.wustl.edu	37	11	7507225	7507225	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198474.3	+1	validated	p.R40Q	0.990	109	0%	74	16.2%	0	-	unknown(0)	tolerated(0.75)	-	NULL
PPFIBP2	8495	genome.wustl.edu	37	11	7663534	7663534	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003621.2	+1	validated	p.R508Q	1.000	26	0%	17	47.1%	8	37.5%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
PPFIBP2	8495	genome.wustl.edu	37	11	7670444	7670444	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003621.2	+1	validated	p.R659Q	0.763	253	0%	140	87.9%	14	100%	probably_damaging(0.99)	tolerated(0.05)	deleterious(0.787)	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
OVCH2	341277	genome.wustl.edu	37	11	7716874	7716874	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198185.2	-1	validated	p.F403	0.982	238	0%	83	43.4%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
OR5P2	120065	genome.wustl.edu	37	11	7817678	7817678	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153444.1	-1	provisional	p.S271F	0.998	234	0%	74	24.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR5P2	120065	genome.wustl.edu	37	11	7818376	7818377	+	Frame_Shift_Ins	INS	-	-	TTGCCAGATATGG	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153444.1	-1	provisional	p.L39fs	0.741:0.930	-	-	-	-	-	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR5P3	120066	genome.wustl.edu	37	11	7846813	7846813	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153445.1	-1	provisional	p.K236T	0.997	127	0%	66	43.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
NLRP10	338322	genome.wustl.edu	37	11	7981511	7981511	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176821.3	-1	reviewed	p.E550*	0.029	160	0%	104	52.9%	0	-	-	-	-	NULL
NLRP10	338322	genome.wustl.edu	37	11	7981994	7981994	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176821.3	-1	reviewed	p.V389I	0.540	23	0%	29	31%	0	-	benign(0.096)	tolerated(0.47)	neutral(0.018)	NULL
TUB	7275	genome.wustl.edu	37	11	8120397	8120397	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003320.4	+1	reviewed	p.R419H	1.000	76	0%	55	47.3%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tub,superfamily_Tubby_C
RIC3	79608	genome.wustl.edu	37	11	8132424	8132424	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024557.3	-1	validated	p.E310K	0.999	116	0%	73	39.7%	1	0%	possibly_damaging(0.646)	deleterious(0.03)	deleterious(0.591)	NULL
STK33	65975	genome.wustl.edu	37	11	8435092	8435092	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030906.2	-1	validated	p.G432R	0.000	521	0%	207	45.4%	2	50%	benign(0.006)	tolerated(0.2)	neutral(0.049)	NULL
TRIM66	9866	genome.wustl.edu	37	11	8662500	8662500	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014818.1	-1	validated	p.S329	0.018	22	0%	21	52.4%	0	-	-	-	-	NULL
ST5	6764	genome.wustl.edu	37	11	8719174	8719174	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005418.3	-1	reviewed	p.E984K	1.000	76	0%	53	30.2%	36	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ST5	6764	genome.wustl.edu	37	11	8751696	8751696	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005418.3	-1	reviewed	p.D381N	1.000	85	0%	99	44.4%	14	57.1%	benign(0)	tolerated(0.29)	neutral(0.029)	NULL
DENND5A	23258	genome.wustl.edu	37	11	9166617	9166617	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015213.2	-1	validated	p.D1016A	1.000	73	0%	32	59.4%	55	43.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_PLAT,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)
ZNF143	7702	genome.wustl.edu	37	11	9492960	9492960	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003442.5	+1	validated	p.T35	0.056	189	0%	131	48.1%	6	83.3%	-	-	-	NULL
SBF2	81846	genome.wustl.edu	37	11	9834107	9834107	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030962.3	-1	reviewed	p.A1376V	1.000	127	0%	63	42.9%	17	52.9%	benign(0.001)	tolerated(0.68)	neutral(0.002)	superfamily_(Phosphotyrosine protein) phosphatases II
SBF2	81846	genome.wustl.edu	37	11	10051377	10051377	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030962.3	-1	reviewed	p.V150I	1.000	114	0%	30	40%	7	28.5%	benign(0.011)	tolerated(0.67)	neutral(0.003)	HMMPfam_DENN,HMMSmart_SM00799
MRVI1	10335	genome.wustl.edu	37	11	10650348	10650348	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098579.1	-1	reviewed	p.A192V	0.510	44	0%	43	30.2%	2	0%	benign(0)	tolerated(0.73)	neutral(0.002)	NULL
MRVI1	10335	genome.wustl.edu	37	11	10651142	10651142	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098579.1	-1	reviewed	p.R164*	1.000	69	0%	52	44.2%	1	0%	-	-	-	NULL
CTR9	9646	genome.wustl.edu	37	11	10789903	10789903	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014633.3	+1	provisional	p.A658	0.996	233	0%	108	11.1%	23	21.7%	-	-	-	superfamily_SSF48452
GALNTL4	374378	genome.wustl.edu	37	11	11354261	11354261	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198516.2	-1	validated	p.D466N	1.000	24	0%	16	43.8%	13	7.6%	benign(0.072)	tolerated(0.55)	neutral(0.012)	superfamily_Ricin B-like lectins
MICALCL	84953	genome.wustl.edu	37	11	12348721	12348721	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032867.2	+1	validated	p.A546V	1.000	54	0%	45	44.4%	1	0%	benign(0.097)	deleterious(0.03)	neutral(0.372)	NULL
SPON1	10418	genome.wustl.edu	37	11	14096897	14096897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000310358	+1	known	p.S162I	1.000	158	0%	74	37.8%	30	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Reeler
COPB1	1315	genome.wustl.edu	37	11	14487902	14487902	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144061.1	-1	reviewed	p.I739S	1.000	313	0%	136	35.3%	144	41.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Coatamer_beta_C
COPB1	1315	genome.wustl.edu	37	11	14502363	14502363	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144061.1	-1	reviewed	p.R385Q	1.000	240	0%	109	43.1%	78	43.5%	benign(0.131)	tolerated(1)	neutral(0.011)	HMMPfam_Adaptin_N,superfamily_ARM-type_fold
PSMA1	5682	genome.wustl.edu	37	11	14535413	14535413	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148976.2	-1	reviewed	p.R128*	0.855	182	0%	83	37.3%	159	6.9%	-	-	-	HMMPfam_Proteasome,superfamily_SSF56235
PDE3B	5140	genome.wustl.edu	37	11	14840739	14840739	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000922.3	+1	validated	p.C597*	0.122	243	0%	77	42.9%	1	0%	-	-	-	NULL
CALCA	796	genome.wustl.edu	37	11	14990458	14990458	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033952.2	-1	reviewed	p.T105A	1.000	99	0%	80	51.2%	0	-	benign(0.045)	tolerated(0.13)	neutral(0.255)	HMMPfam_Calc_CGRP_IAPP,HMMSmart_SM00113
INSC	387755	genome.wustl.edu	37	11	15222443	15222443	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031853.3	+1	provisional	p.R303H	1.000	59	0%	49	42.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM repeat
SOX6	55553	genome.wustl.edu	37	11	16007856	16007856	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033326.3	-1	reviewed	p.R673*	1.000	262	0.4%	137	36.5%	9	11.1%	-	-	-	superfamily_HMG-box
PLEKHA7	144100	genome.wustl.edu	37	11	16816194	16816194	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175058.4	-1	validated	p.P862	0.007	51	2%	37	43.2%	4	50%	-	-	-	NULL
PIK3C2A	5286	genome.wustl.edu	37	11	17126840	17126840	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002645.2	-1	validated	p.L1186R	1.000	283	0%	146	37.7%	10	50%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like)
PIK3C2A	5286	genome.wustl.edu	37	11	17191094	17191094	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002645.2	-1	validated	p.A65	1.000	434	0%	265	37%	8	62.5%	-	-	-	NULL
NUCB2	4925	genome.wustl.edu	37	11	17332761	17332761	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005013.2	+1	validated	p.E231*	1.000	195	0%	100	40%	41	2.4%	-	-	-	superfamily_EF-hand
KCNJ11	3767	genome.wustl.edu	37	11	17409467	17409467	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000525.3	-1	reviewed	p.D58H	1.000	17	0%	16	25%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IRK,superfamily_SSF81324
ABCC8	6833	genome.wustl.edu	37	11	17414607	17414607	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000352.3	-1	reviewed	p.F1559	0.232	27	0%	30	43.3%	0	-	-	-	-	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC8	6833	genome.wustl.edu	37	11	17416721	17416721	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000352.3	-1	reviewed	p.L1470R	0.999	15	0%	17	35.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC8	6833	genome.wustl.edu	37	11	17470188	17470188	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000352.3	-1	reviewed	p.S403P	1.000	194	0%	109	43.1%	0	-	probably_damaging(0.995)	tolerated(0.07)	deleterious(0.776)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC8	6833	genome.wustl.edu	37	11	17491678	17491678	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000352.3	-1	reviewed	p.E128K	1.000	47	0%	37	48.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
USH1C	10083	genome.wustl.edu	37	11	17527469	17527469	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153676.3	-1	reviewed	p.R681*	1.000	47	0%	38	39.5%	0	-	-	-	-	NULL
USH1C	10083	genome.wustl.edu	37	11	17532034	17532034	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153676.3	-1	reviewed	p.S483L	1.000	124	0%	73	41.1%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
USH1C	10083	genome.wustl.edu	37	11	17533494	17533494	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153676.3	-1	reviewed	p.M456I	1.000	399	0.5%	223	39.9%	0	-	benign(0.021)	tolerated(0.37)	neutral(0.020)	NULL
USH1C	10083	genome.wustl.edu	37	11	17542523	17542523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153676.3	-1	reviewed	p.E368D	1.000	393	0%	276	40.9%	0	-	possibly_damaging(0.95)	tolerated(0.08)	deleterious(0.694)	NULL
USH1C	10083	genome.wustl.edu	37	11	17552746	17552746	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153676.3	-1	reviewed	p.I114	0.996	10	0%	10	70%	0	-	-	-	-	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ
KCNC1	3746	genome.wustl.edu	37	11	17793771	17793771	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001112741.1	+1	reviewed	p.S377N	1.000	6	0.000	9	0.444	0	-	benign(0.148)	tolerated(0.5)	neutral(0.023)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SAAL1	113174	genome.wustl.edu	37	11	18118394	18118394	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138421.2	-1	validated	p.A86V	1.000	185	0%	69	39.1%	14	42.8%	probably_damaging(0.996)	tolerated(0.31)	deleterious(0.489)	superfamily_ARM-type_fold
MRGPRX4	117196	genome.wustl.edu	37	11	18195097	18195097	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_054032.3	+1	validated	p.L98	0.000	88	0%	109	41.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LDHA	3939	genome.wustl.edu	37	11	18418410	18418410	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005566.3	+1	reviewed	p.Q7	1.000	249	0%	137	37.2%	585	47.1%	-	-	-	superfamily_NAD(P)-binding Rossmann-fold domains
LDHA	3939	genome.wustl.edu	37	11	18428773	18428773	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005566.3	+1	reviewed	p.R315H	1.000	185	0.5%	117	40.2%	1415	42.6%	benign(0.008)	tolerated(0.16)	neutral(0.059)	HMMPfam_Ldh_1_C,superfamily_LDH C-terminal domain-like
LDHAL6A	160287	genome.wustl.edu	37	11	18497963	18497963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144071.1	+1	validated	p.V209I	0.924	320	0%	151	15.2%	0	-	benign(0.009)	tolerated(0.28)	neutral(0.032)	HMMPfam_Ldh_1_C,superfamily_Lactate_DH/Glyco_hydro_4_C
TSG101	7251	genome.wustl.edu	37	11	18528466	18528466	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006292.2	-1	reviewed	p.S162	1.000	195	0%	72	15.3%	106	2.8%	-	-	-	HMMSmart_SM00212
TSG101	7251	genome.wustl.edu	37	11	18541126	18541126	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006292.2	-1	reviewed	p.R23C	1.000	326	0%	138	46.4%	23	39.1%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMSmart_SM00212,HMMPfam_UEV,superfamily_UBC-like
SPTY2D1	144108	genome.wustl.edu	37	11	18631437	18631437	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194285.2	-1	validated	p.R677*	0.982	452	0%	288	40.3%	15	33.3%	-	-	-	HMMPfam_SPT2,HMMSmart_SM00784
SPTY2D1	144108	genome.wustl.edu	37	11	18636961	18636961	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194285.2	-1	validated	p.R287M	1.000	95	0%	61	42.6%	25	52%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
TMEM86A	144110	genome.wustl.edu	37	11	18722549	18722549	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153347.1	+1	provisional	p.P31S	1.000	52	0%	51	37.3%	3	0%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
TMEM86A	144110	genome.wustl.edu	37	11	18722738	18722738	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153347.1	+1	provisional	p.V94M	0.965	11	0%	17	52.9%	4	25%	benign(0.133)	tolerated(0.13)	neutral(0.264)	HMMPfam_YhhN
IGSF22	283284	genome.wustl.edu	37	11	18732323	18732323	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173588.3	-1	validated	p.A716	0.000	61	1.6%	64	50%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
IGSF22	283284	genome.wustl.edu	37	11	18739491	18739491	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173588.3	-1	validated	p.E320	0.732	79	0%	72	44.4%	0	-	-	-	-	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
IGSF22	283284	genome.wustl.edu	37	11	18743481	18743481	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173588.3	-1	validated	p.P73S	0.964	22	0%	16	43.8%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
PTPN5	84867	genome.wustl.edu	37	11	18755173	18755173	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006906.1	-1	validated	p.S337I	1.000	90	0%	63	49.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
MRGPRX1	259249	genome.wustl.edu	37	11	18955965	18955965	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_147199.3	-1	provisional	p.S123P	0.992	60	0%	45	37.8%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
MRGPRX2	117194	genome.wustl.edu	37	11	19077244	19077244	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_054030.2	-1	provisional	p.G236S	0.559	44	0%	34	38.2%	0	-	probably_damaging(0.994)	tolerated(0.13)	deleterious(0.705)	HMMPfam_7tm_1,superfamily_SSF81321
ZDHHC13	54503	genome.wustl.edu	37	11	19184928	19184928	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019028.2	+1	validated	p.A396V	1.000	368	0%	93	48.4%	13	92.3%	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
NAV2	89797	genome.wustl.edu	37	11	19901611	19901611	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182964.5	+1	validated	p.P236	1.000	20	0%	21	47.6%	1	0%	-	-	-	NULL
NAV2	89797	genome.wustl.edu	37	11	20057532	20057532	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182964.5	+1	validated	p.S932	0.516	49	0%	27	14.8%	8	12.5%	-	-	-	NULL
NAV2	89797	genome.wustl.edu	37	11	20125258	20125258	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182964.5	+1	validated	p.H2214P	1.000	189	0%	134	44%	22	63.6%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DBX1	120237	genome.wustl.edu	37	11	20180780	20180780	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029865.1	-1	provisional	p.F142	0.977	112	0%	99	40.4%	0	-	-	-	-	NULL
HTATIP2	10553	genome.wustl.edu	37	11	20404555	20404555	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098520.1	+1	validated	p.R212H	1.000	58	0%	56	55.4%	16	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_NAD(P)-binding Rossmann-fold domains
LOC645490	645490	genome.wustl.edu	37	11	20596171	20596171	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_928515.4	+1	model	p.M211I	1.000	148	0%	32	15.6%	0	-	-	-	-	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
SLC6A5	9152	genome.wustl.edu	37	11	20628623	20628623	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004211.3	+1	reviewed	p.S250	0.002	49	0%	48	45.8%	0	-	-	-	-	HMMPfam_SNF
ANO5	203859	genome.wustl.edu	37	11	22242668	22242668	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213599.2	+1	reviewed	p.D69V	1.000	398	0%	61	45.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC17A6	57084	genome.wustl.edu	37	11	22382531	22382531	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020346.2	+1	validated	e5+1	1.000	106	0%	62	43.5%	0	-	-	-	-	-
GAS2	2620	genome.wustl.edu	37	11	22707296	22707296	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143830.1	+1	reviewed	p.E76D	1.000	300	0%	123	48%	0	-	benign(0.003)	tolerated(0.16)	neutral(0.059)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
LUZP2	338645	genome.wustl.edu	37	11	24753726	24753726	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009909.2	+1	validated	p.Q81H	0.994	326	0%	65	29.2%	1	0%	possibly_damaging(0.928)	tolerated(0.41)	neutral(0.391)	NULL
ANO3	63982	genome.wustl.edu	37	11	26484634	26484634	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031418.2	+1	validated	p.S124F	1.000	154	0%	34	55.9%	0	-	possibly_damaging(0.887)	deleterious(0.01)	deleterious(0.752)	NULL
FIBIN	387758	genome.wustl.edu	37	11	27016671	27016671	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203371.1	+1	validated	p.R200*	0.992	39	0%	33	30.3%	2	100%	-	-	-	NULL
CCDC34	91057	genome.wustl.edu	37	11	27371826	27371826	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080654.2	-1	validated	p.S220Y	0.000	701	0.3%	304	48.4%	0	-	unknown(0)	-	-	NULL
LGR4	55366	genome.wustl.edu	37	11	27393927	27393927	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018490.2	-1	validated	p.Y466	1.000	221	0%	115	15.7%	23	17.3%	-	-	-	superfamily_SSF52047
LIN7C	55327	genome.wustl.edu	37	11	27520301	27520301	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018362.3	-1	validated	p.A163	0.944	523	0%	268	10.1%	14	21.4%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
KIF18A	81930	genome.wustl.edu	37	11	28098616	28098616	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031217.3	-1	validated	p.F455V	0.996	564	0%	181	19.9%	6	33.3%	possibly_damaging(0.532)	tolerated(0.5)	neutral(0.190)	NULL
METTL15	196074	genome.wustl.edu	37	11	28352005	28352005	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113528.1	+1	validated	p.A281T	1.000	94	0%	52	48.1%	9	66.6%	benign(0.365)	deleterious(0)	deleterious(0.560)	HMMPfam_Methyltransf_5,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Putative methyltransferase TM0872 insert domain
KCNA4	3739	genome.wustl.edu	37	11	30032278	30032278	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002233.2	-1	reviewed	p.E650K	1.000	90	0%	69	40.6%	0	-	benign(0.008)	tolerated(0.05)	neutral(0.345)	NULL
DNAJC24	120526	genome.wustl.edu	37	11	31392304	31392304	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181706.4	+1	validated	p.A3	0.001	167	0%	82	50%	10	40%	-	-	-	superfamily_Chaperone J-domain
IMMP1L	196294	genome.wustl.edu	37	11	31484792	31484792	+	Missense_Mutation	SNP	C	C	T	rs180782155	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144981.1	-1	provisional	p.R11Q	1.000	196	0%	89	41.6%	22	40.9%	benign(0.375)	tolerated(0.44)	neutral(0.132)	NULL
PAX6	5080	genome.wustl.edu	37	11	31822371	31822371	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001604.4	-1	reviewed	p.A145T	1.000	75	0%	71	22.5%	11	27.2%	benign(0.012)	tolerated(0.15)	neutral(0.241)	NULL
WT1	7490	genome.wustl.edu	37	11	32421518	32421518	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024426.3	-1	reviewed	p.T358	0.253	146	0.7%	117	17.9%	0	-	-	-	-	HMMPfam_WT1
CCDC73	493860	genome.wustl.edu	37	11	32624459	32624459	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008391.2	-1	validated	p.N1046	0.002	702	0%	360	38.1%	2	50%	-	-	-	NULL
CCDC73	493860	genome.wustl.edu	37	11	32635272	32635272	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008391.2	-1	validated	p.E864	1.000	227	0%	81	42%	0	-	-	-	-	NULL
CCDC73	493860	genome.wustl.edu	37	11	32697534	32697534	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008391.2	-1	validated	p.E155*	1.000	670	0%	255	42.4%	0	-	-	-	-	NULL
QSER1	79832	genome.wustl.edu	37	11	32953688	32953688	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076786.1	+1	provisional	p.Y166C	1.000	214	0%	81	39.5%	5	60%	possibly_damaging(0.88)	deleterious(0)	deleterious(0.788)	NULL
QSER1	79832	genome.wustl.edu	37	11	32997004	32997004	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000428421	+1	known	p.L693V	0.000	77	0%	35	42.9%	0	-	unknown(0)	-	-	NULL
DEPDC7	91614	genome.wustl.edu	37	11	33054274	33054274	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077242.1	+1	validated	p.L400V	0.240	273	0%	106	39.6%	0	-	benign(0.008)	tolerated(0.07)	neutral(0.319)	NULL
TCP11L1	55346	genome.wustl.edu	37	11	33078709	33078709	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145541.1	+1	validated	p.C115	0.995	302	0%	130	50%	0	-	-	-	-	HMMPfam_Tcp11
TCP11L1	55346	genome.wustl.edu	37	11	33079565	33079565	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145541.1	+1	validated	p.A173V	1.000	139	0%	80	42.5%	3	33.3%	benign(0.165)	deleterious(0.05)	neutral(0.360)	HMMPfam_Tcp11
C11orf41	25758	genome.wustl.edu	37	11	33565287	33565287	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012194.1	+1	validated	p.G429	0.760	121	0%	67	11.9%	2	0%	-	-	-	NULL
C11orf41	25758	genome.wustl.edu	37	11	33566445	33566445	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012194.1	+1	validated	p.A678V	0.005	26	0%	18	33.3%	1	100%	benign(0.344)	deleterious(0.01)	deleterious(0.514)	NULL
C11orf41	25758	genome.wustl.edu	37	11	33572759	33572759	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012194.1	+1	validated	p.A934	0.744	97	0%	56	46.4%	1	100%	-	-	-	NULL
C11orf41	25758	genome.wustl.edu	37	11	33581341	33581341	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012194.1	+1	validated	p.V1010A	0.995	73	0%	49	51%	1	0%	benign(0.041)	tolerated(0.77)	neutral(0.004)	NULL
C11orf41	25758	genome.wustl.edu	37	11	33628320	33628320	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012194.1	+1	validated	p.P1380	0.988	24	0.000	6	0.833	1	100%	-	-	-	NULL
C11orf41	25758	genome.wustl.edu	37	11	33680308	33680308	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012194.1	+1	validated	p.D1666E	0.716	8	0.000	13	0.308	2	0%	probably_damaging(0.999)	tolerated(0.33)	deleterious(0.514)	NULL
LMO2	4005	genome.wustl.edu	37	11	33881076	33881076	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005574.3	-1	reviewed	p.I170M	1.000	89	0%	66	15.2%	33	21.2%	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
CAPRIN1	4076	genome.wustl.edu	37	11	34093513	34093513	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005898.4	+1	validated	p.S115R	0.998	423	0%	153	47.7%	77	51.9%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
CAT	847	genome.wustl.edu	37	11	34470861	34470861	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001752.3	+1	reviewed	p.H63	1.000	118	0%	66	37.9%	75	42.6%	-	-	-	superfamily_Catalase_N,HMMPfam_Catalase
APIP	51074	genome.wustl.edu	37	11	34910326	34910326	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015957.2	-1	validated	p.L100I	1.000	558	0.2%	157	36.3%	42	40.4%	possibly_damaging(0.448)	deleterious(0.02)	deleterious(0.529)	HMMPfam_Aldolase_II,superfamily_AraD-like aldolase/epimerase
PDHX	8050	genome.wustl.edu	37	11	35016488	35016488	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003477.2	+1	reviewed	p.I425	1.000	99	0%	70	38.6%	38	31.5%	-	-	-	HMMPfam_2-oxoacid_dh,superfamily_SSF52777
SLC1A2	6506	genome.wustl.edu	37	11	35287180	35287180	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004171.3	-1	reviewed	p.M516T	1.000	480	0%	273	50.2%	1	0%	benign(0.133)	tolerated(0.08)	neutral(0.311)	NULL
PAMR1	25891	genome.wustl.edu	37	11	35463155	35463155	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015430.2	-1	validated	p.R320C	0.389	148	0%	77	50.6%	1	0%	possibly_damaging(0.552)	tolerated(0.12)	neutral(0.449)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
PAMR1	25891	genome.wustl.edu	37	11	35463240	35463240	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015430.2	-1	validated	p.V291	0.185	86	0%	42	40.5%	3	0%	-	-	-	NULL
RAG2	5897	genome.wustl.edu	37	11	36615380	36615380	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000536.3	-1	reviewed	p.V113	0.846	293	0%	188	43.1%	0	-	-	-	-	HMMPfam_RAG2
LRRC4C	57689	genome.wustl.edu	37	11	40137359	40137359	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020929.1	-1	validated	p.S162R	1.000	152	0%	53	47.2%	0	-	benign(0.218)	tolerated(0.1)	neutral(0.308)	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
LOC399881	399881	genome.wustl.edu	37	11	43284076	43284076	+	RNA	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_040375.2	-1	model	NULL	0.995	22	0%	12	41.7%	0	-	-	-	-	-
TTC17	55761	genome.wustl.edu	37	11	43411359	43411359	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018259.5	+1	validated	p.S136N	1.000	213	0%	95	41.1%	12	58.3%	possibly_damaging(0.817)	tolerated(0.48)	neutral(0.320)	NULL
TTC17	55761	genome.wustl.edu	37	11	43436272	43436272	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018259.5	+1	validated	p.R733C	1.000	259	0%	62	45.2%	26	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF48452
ACCS	84680	genome.wustl.edu	37	11	44105088	44105088	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127219.1	+1	validated	p.R457C	1.000	52	0%	38	34.2%	4	75%	probably_damaging(0.995)	deleterious(0.04)	deleterious(0.806)	HMMPfam_Aminotran_1_2,superfamily_PyrdxlP-dep_Trfase_major
CD82	3732	genome.wustl.edu	37	11	44626947	44626947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002231.3	+1	reviewed	p.A102T	0.632	53	0%	45	46.7%	69	39.1%	benign(0.02)	tolerated(0.08)	neutral(0.301)	HMMPfam_Tetraspannin
PRDM11	56981	genome.wustl.edu	37	11	45204611	45204611	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020229.2	+1	validated	p.I175	1.000	32	0%	38	44.7%	5	60%	-	-	-	NULL
CRY2	1408	genome.wustl.edu	37	11	45882561	45882561	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021117.3	+1	validated	p.G231	0.800	21	0%	13	30.8%	8	62.5%	-	-	-	superfamily_DNA_photolyase_N
GYLTL1B	120071	genome.wustl.edu	37	11	45946064	45946064	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152312.3	+1	validated	p.V167A	1.000	65	0%	59	16.9%	16	18.7%	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases
PHF21A	51317	genome.wustl.edu	37	11	45987074	45987074	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101802.1	-1	validated	p.R262M	1.000	62	0%	35	48.6%	12	41.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
AMBRA1	55626	genome.wustl.edu	37	11	46563548	46563548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017749.2	-1	validated	p.E583D	1.000	53	0%	45	53.3%	11	18.1%	benign(0.004)	tolerated(0.28)	neutral(0.032)	NULL
AMBRA1	55626	genome.wustl.edu	37	11	46568757	46568757	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017749.2	-1	validated	p.R95H	1.000	96	1%	54	50%	16	37.5%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
HARBI1	283254	genome.wustl.edu	37	11	46637429	46637429	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173811.3	-1	validated	p.R120H	0.850	44	0%	32	53.1%	2	0%	benign(0.001)	tolerated(0.19)	neutral(0.050)	NULL
ZNF408	79797	genome.wustl.edu	37	11	46724281	46724281	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024741.2	+1	validated	p.V120M	0.001	218	0%	189	37%	10	80%	possibly_damaging(0.805)	deleterious(0)	deleterious(0.748)	NULL
F2	2147	genome.wustl.edu	37	11	46744816	46744816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000506.3	+1	reviewed	p.R135C	1.000	31	0%	27	37%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Kringle,HMMSmart_KR,superfamily_Kringle-like
F2	2147	genome.wustl.edu	37	11	46750322	46750322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000506.3	+1	reviewed	p.K469N	0.972	50	0%	26	38.5%	0	-	possibly_damaging(0.828)	tolerated(0.09)	deleterious(0.611)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
CKAP5	9793	genome.wustl.edu	37	11	46801837	46801837	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008938.1	-1	validated	p.G780	0.205	193	0%	86	40.7%	31	58%	-	-	-	superfamily_ARM repeat
LRP4	4038	genome.wustl.edu	37	11	46890572	46890572	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002334.3	-1	reviewed	p.D1602N	1.000	153	0%	102	37.3%	7	71.4%	probably_damaging(0.979)	tolerated(0.2)	deleterious(0.471)	superfamily_YWTD domain
LRP4	4038	genome.wustl.edu	37	11	46894758	46894758	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002334.3	-1	reviewed	p.H1492	1.000	52	0%	39	48.7%	4	25%	-	-	-	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain
LRP4	4038	genome.wustl.edu	37	11	46920572	46920572	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002334.3	-1	reviewed	p.P187S	1.000	16	0.000	8	0.500	5	20%	benign(0.076)	tolerated(0.57)	neutral(0.011)	superfamily_LDL receptor-like module
ARFGAP2	84364	genome.wustl.edu	37	11	47189584	47189584	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032389.3	-1	provisional	p.N361D	1.000	156	0%	124	36.3%	50	44%	unknown(0)	tolerated(0.45)	-	NULL
MADD	8567	genome.wustl.edu	37	11	47303966	47303966	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003682.3	+1	reviewed	p.V502M	1.000	30	0%	34	50%	13	15.3%	benign(0.194)	deleterious(0.04)	neutral(0.367)	HMMPfam_dDENN,HMMSmart_SM00801
MADD	8567	genome.wustl.edu	37	11	47304522	47304522	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003682.3	+1	reviewed	e9+2	1.000	65	0%	48	37.5%	0	-	-	-	-	-
MADD	8567	genome.wustl.edu	37	11	47336779	47336779	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003682.3	+1	reviewed	p.R1426	0.052	177	0.6%	142	13.4%	20	10%	-	-	-	NULL
MYBPC3	4607	genome.wustl.edu	37	11	47372887	47372887	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000256.3	-1	reviewed	p.T65	0.189	13	0%	17	41.2%	0	-	-	-	-	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
PTPMT1	114971	genome.wustl.edu	37	11	47591333	47591333	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175732.2	+1	validated	p.K113Q	1.000	39	0%	53	13.2%	75	12%	unknown(0)	-	-	HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II
KBTBD4	55709	genome.wustl.edu	37	11	47597250	47597250	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018095.4	-1	validated	p.D213	1.000	210	0%	152	42.8%	9	44.4%	-	-	-	HMMPfam_BACK
AGBL2	79841	genome.wustl.edu	37	11	47711725	47711725	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024783.2	-1	validated	p.R512W	1.000	109	0%	69	29%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M14,superfamily_Zn-dependent exopeptidases
FNBP4	23360	genome.wustl.edu	37	11	47744606	47744606	+	Silent	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015308.2	-1	validated	p.P909	0.401	35	0%	25	28%	22	50%	-	-	-	NULL
FNBP4	23360	genome.wustl.edu	37	11	47772525	47772525	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015308.2	-1	validated	p.T283	0.000	339	0%	186	50%	14	7.1%	-	-	-	NULL
NUP160	23279	genome.wustl.edu	37	11	47820008	47820008	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015231.1	-1	validated	p.R968Q	1.000	149	0%	64	37.5%	16	50%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
PTPRJ	5795	genome.wustl.edu	37	11	48146653	48146653	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002843.3	+1	reviewed	p.E336D	0.000	33	0%	16	37.5%	5	20%	benign(0.002)	tolerated(0.33)	neutral(0.024)	HMMSmart_FN3
PTPRJ	5795	genome.wustl.edu	37	11	48158725	48158725	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002843.3	+1	reviewed	p.A682T	0.000	109	0%	63	42.9%	10	50%	benign(0.268)	tolerated(0.66)	neutral(0.031)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
PTPRJ	5795	genome.wustl.edu	37	11	48181582	48181582	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002843.3	+1	reviewed	p.R1180I	1.000	115	0%	44	36.4%	7	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
OR4B1	119765	genome.wustl.edu	37	11	48238809	48238809	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005470.1	+1	provisional	p.G150S	0.906	165	0%	84	44%	0	-	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMPfam_7tm_1,superfamily_SSF81321
OR4C45	403257	genome.wustl.edu	37	11	48373937	48373937	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000415304	-1	known	p.F21	0.605	510	0%	221	24%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
OR4A47	403253	genome.wustl.edu	37	11	48511251	48511251	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005512.2	+1	validated	p.D303Y	0.031	119	0%	67	47.8%	0	-	benign(0.092)	deleterious(0.05)	neutral(0.352)	NULL
LOC120824	120824	genome.wustl.edu	37	11	48997389	48997389	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_062300.6	-1	model	p.K340	0.006	195	0%	60	45%	0	-	-	-	-	HMMPfam_SPRY
LOC283116	283116	genome.wustl.edu	37	11	49053305	49053305	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_208043.4	+1	model	p.C52R	0.916	213	0%	114	47.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_RING,superfamily_SSF57850
LOC283116	283116	genome.wustl.edu	37	11	49055822	49055822	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_208043.4	+1	model	p.R211Q	0.017	647	0%	350	39.7%	0	-	benign(0)	tolerated(1)	-	NULL
LOC283116	283116	genome.wustl.edu	37	11	49059070	49059070	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_208043.4	+1	model	p.I300	0.000	131	0%	61	36.1%	0	-	-	-	-	NULL
LOC646754	646754	genome.wustl.edu	37	11	49078895	49078895	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_929704.3	-1	model	p.I181M	0.001	276	0%	83	37.3%	0	-	-	-	-	NULL
FOLH1	2346	genome.wustl.edu	37	11	49178289	49178289	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004476.1	-1	reviewed	p.A535T	1.000	464	0%	211	38.9%	6	16.6%	possibly_damaging(0.908)	tolerated(0.06)	deleterious(0.684)	superfamily_Zn-dependent exopeptidases
FOLH1	2346	genome.wustl.edu	37	11	49221981	49221981	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004476.1	-1	reviewed	p.Q79H	0.969	472	0%	214	38.3%	10	40%	benign(0.024)	tolerated(0.08)	neutral(0.301)	NULL
ENSG00000123447	0	genome.wustl.edu	37	11	49437244	49437244	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000243152	-1	known	p.A21V	1.000	177	0%	33	30.3%	0	-	-	-	-	superfamily_Di-copper_centre
ENSG00000205035	0	genome.wustl.edu	37	11	49805590	49805590	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000357667	+1	known	p.L292	1.000	62	0%	46	47.8%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
OR4A5	81318	genome.wustl.edu	37	11	51411990	51411990	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005272.3	-1	validated	p.R136*	0.002	128	0%	37	51.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LOC440041	440041	genome.wustl.edu	37	11	55063049	55063049	+	RNA	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_016142.3	-1	model	NULL	0.179	101	0%	21	38.1%	0	-	-	-	-	-
OR4A16	81327	genome.wustl.edu	37	11	55111048	55111048	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005274.1	+1	provisional	p.I124	0.996	186	0%	62	46.8%	0	-	-	-	-	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
OR4A15	81328	genome.wustl.edu	37	11	55135594	55135594	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005275.1	+1	provisional	p.A79T	0.000	128	0%	41	34.1%	0	-	benign(0)	tolerated(0.48)	neutral(0.011)	HMMPfam_7tm_1,superfamily_SSF81321
OR4A15	81328	genome.wustl.edu	37	11	55135859	55135859	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005275.1	+1	provisional	p.R167Q	0.000	226	0%	74	36.5%	0	-	benign(0.304)	tolerated(0.57)	neutral(0.101)	HMMPfam_7tm_1,superfamily_SSF81321
ENSG00000181943	0	genome.wustl.edu	37	11	55259392	55259392	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000314657	+1	known	p.C225Y	0.963	87	0%	23	34.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4C15	81309	genome.wustl.edu	37	11	55322691	55322691	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001920.1	+1	provisional	p.F303L	0.855	443	0%	163	54.6%	0	-	benign(0.072)	deleterious(0)	neutral(0.450)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4S2	219431	genome.wustl.edu	37	11	55418706	55418706	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004059.2	+1	validated	p.E109D	0.997	132	0%	46	89.1%	0	-	benign(0.31)	tolerated(0.07)	neutral(0.415)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
ENSG00000186886	0	genome.wustl.edu	37	11	55493963	55493963	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000333984	+1	known	p.I53V	0.997	46	0%	22	50%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
SPRYD5	84767	genome.wustl.edu	37	11	55653264	55653264	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032681.3	+1	validated	p.E120D	0.857	34	0%	10	40%	0	-	probably_damaging(0.97)	deleterious(0.04)	deleterious(0.761)	HMMPfam_zf-B_box,HMMSmart_SM00336
OR5I1	10798	genome.wustl.edu	37	11	55703018	55703018	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006637.1	-1	reviewed	p.L287	0.559	204	0%	41	46.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR10AG1	282770	genome.wustl.edu	37	11	55735179	55735179	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005491.1	-1	provisional	p.K254R	0.008	165	0%	56	41.1%	0	-	benign(0.021)	tolerated(0.12)	neutral(0.262)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR10AG1	282770	genome.wustl.edu	37	11	55735636	55735636	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005491.1	-1	provisional	p.E102K	0.723	120	0%	72	9.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
OR8K5	219453	genome.wustl.edu	37	11	55927208	55927208	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004058.2	-1	validated	p.E196*	0.000	142	0%	52	34.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR8K5	219453	genome.wustl.edu	37	11	55927316	55927316	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004058.2	-1	validated	p.T160A	0.011	134	0%	57	47.4%	0	-	benign(0.085)	tolerated(0.08)	neutral(0.306)	HMMPfam_7tm_1,superfamily_SSF81321
OR8J1	219477	genome.wustl.edu	37	11	56128327	56128327	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005205.1	+1	provisional	p.S202Y	0.542	733	0%	219	43.4%	0	-	possibly_damaging(0.515)	tolerated(0.1)	neutral(0.460)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR8U1	219417	genome.wustl.edu	37	11	56143130	56143130	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005204.1	+1	provisional	p.E11K	0.593	174	0%	52	42.3%	0	-	possibly_damaging(0.877)	deleterious(0.02)	deleterious(0.725)	superfamily_SSF81321
OR5M11	219487	genome.wustl.edu	37	11	56310546	56310546	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005245.1	-1	provisional	p.L63P	1.000	97	0%	59	40.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR5M10	390167	genome.wustl.edu	37	11	56344390	56344390	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004741.1	-1	provisional	p.E270*	0.000	259	0%	135	35.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR5M1	390168	genome.wustl.edu	37	11	56380270	56380270	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004740.1	-1	provisional	p.A237T	0.999	239	0%	78	34.6%	0	-	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_7tm_1,superfamily_SSF81321
OR5AR1	219493	genome.wustl.edu	37	11	56431819	56431819	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004730.1	+1	provisional	p.F220V	0.029	148	0%	79	38%	0	-	benign(0.424)	deleterious(0.01)	deleterious(0.543)	HMMPfam_7tm_1,superfamily_SSF81321
OR9G1	390174	genome.wustl.edu	37	11	56468245	56468245	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005213.1	+1	provisional	p.P128S	1.000	216	0%	91	24.2%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_7tm_1,superfamily_SSF81321
OR5AK3P	81228	genome.wustl.edu	37	11	56738808	56738808	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000326876	+1	known	p.R95Q	0.000	101	0%	19	26.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR5AK2	390181	genome.wustl.edu	37	11	56756578	56756578	+	Nonsense_Mutation	SNP	C	C	T	rs189588796	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005323.1	+1	provisional	p.Q64*	0.302	406	0%	126	41.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
TNKS1BP1	85456	genome.wustl.edu	37	11	57076138	57076138	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033396.2	-1	validated	p.A1349	0.000	22	0%	24	20.8%	34	23.5%	-	-	-	NULL
SSRP1	6749	genome.wustl.edu	37	11	57100435	57100435	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003146.2	-1	reviewed	p.E179*	1.000	24	0%	27	48.1%	67	7.4%	-	-	-	NULL
SSRP1	6749	genome.wustl.edu	37	11	57100494	57100494	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003146.2	-1	reviewed	p.S159F	1.000	45	0%	52	25%	78	21.7%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
P2RX3	5024	genome.wustl.edu	37	11	57117262	57117262	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002559.2	+1	reviewed	p.D199N	0.993	30	0%	17	52.9%	0	-	possibly_damaging(0.56)	deleterious(0.04)	deleterious(0.540)	HMMPfam_P2X_receptor
P2RX3	5024	genome.wustl.edu	37	11	57135844	57135844	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002559.2	+1	reviewed	e10-1	1.000	40	0%	45	22.2%	0	-	-	-	-	-
TIMM10	26519	genome.wustl.edu	37	11	57297606	57297606	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012456.2	-1	validated	p.A19	0.006	158	0%	82	59.8%	154	48.7%	-	-	-	HMMPfam_zf-Tim10_DDP
SMTNL1	219537	genome.wustl.edu	37	11	57314088	57314088	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105565.1	+1	provisional	p.R453C	0.963	27	0%	31	41.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
SERPING1	710	genome.wustl.edu	37	11	57373855	57373855	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000403558	+1	known	p.E331	0.001	159	0%	100	42%	0	-	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
CLP1	10978	genome.wustl.edu	37	11	57427529	57427529	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006831.2	+1	validated	p.G194D	1.000	15	0%	20	55%	11	36.3%	benign(0.082)	tolerated(0.29)	neutral(0.035)	HMMPfam_Clp1
CLP1	10978	genome.wustl.edu	37	11	57428335	57428335	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006831.2	+1	validated	p.K235N	1.000	79	0%	70	44.3%	8	62.5%	benign(0.338)	tolerated(0.16)	neutral(0.166)	HMMPfam_Clp1
ZDHHC5	25921	genome.wustl.edu	37	11	57440572	57440572	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015457.2	+1	validated	p.E4*	1.000	80	1.3%	80	52.5%	35	48.5%	-	-	-	NULL
CTNND1	1500	genome.wustl.edu	37	11	57569472	57569472	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085458.1	+1	validated	p.K408N	1.000	44	0%	25	36%	63	49.2%	benign(0.053)	tolerated(0.27)	neutral(0.037)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
OR5B17	219965	genome.wustl.edu	37	11	58125821	58125821	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005489.1	-1	validated	p.S241Y	0.566	155	0%	52	51.9%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_7tm_1,superfamily_SSF81321
OR5B21	219968	genome.wustl.edu	37	11	58275295	58275295	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005218.1	-1	provisional	p.C95Y	1.000	58	0%	29	27.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
LPXN	9404	genome.wustl.edu	37	11	58294999	58294999	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143995.1	-1	reviewed	p.S368	0.896	55	0%	29	79.3%	7	42.8%	-	-	-	HMMPfam_LIM,HMMSmart_LIM,superfamily_SSF57716
ZFP91	80829	genome.wustl.edu	37	11	58384744	58384744	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053023.3	+1	reviewed	p.S426	1.000	100	0%	43	37.2%	31	45.1%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
GLYATL2	219970	genome.wustl.edu	37	11	58604570	58604570	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145016.3	-1	validated	p.L132I	0.036	586	0%	241	42.3%	11	45.4%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_Gly_acyl_tr_N,superfamily_Acyl-CoA N-acyltransferases (Nat)
FAM111B	374393	genome.wustl.edu	37	11	58892778	58892778	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198947.3	+1	validated	p.P403L	0.003	121	0%	29	44.8%	2	50%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
FAM111A	63901	genome.wustl.edu	37	11	58919864	58919864	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142519.1	+1	validated	p.K241	0.159	123	0%	67	10.4%	14	14.2%	-	-	-	NULL
MPEG1	219972	genome.wustl.edu	37	11	58979080	58979080	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039396.1	-1	validated	p.H420R	0.006	65	0%	55	47.3%	1	0%	benign(0)	tolerated(0.82)	neutral(0.001)	NULL
MPEG1	219972	genome.wustl.edu	37	11	58979205	58979205	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039396.1	-1	validated	p.F378	0.582	108	0%	55	38.2%	0	-	-	-	-	NULL
MPEG1	219972	genome.wustl.edu	37	11	58979511	58979511	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039396.1	-1	validated	p.Q276H	0.103	62	0%	32	34.4%	0	-	possibly_damaging(0.819)	tolerated(0.52)	neutral(0.318)	HMMPfam_MACPF,HMMSmart_MACPF
OR4D6	219983	genome.wustl.edu	37	11	59224439	59224439	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004708.1	+1	provisional	p.D2	0.000	285	0%	127	22.8%	0	-	-	-	-	superfamily_SSF81321
OR4D10	390197	genome.wustl.edu	37	11	59244942	59244942	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004705.1	+1	provisional	p.F14V	0.577	129	0%	48	22.9%	0	-	benign(0.008)	deleterious(0)	neutral(0.445)	superfamily_Family A G protein-coupled receptor-like
OSBP	5007	genome.wustl.edu	37	11	59344334	59344334	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002556.2	-1	reviewed	p.K742T	1.000	100	0%	61	42.6%	45	42.2%	probably_damaging(0.956)	deleterious(0.01)	deleterious(0.805)	HMMPfam_Oxysterol_BP
OSBP	5007	genome.wustl.edu	37	11	59344394	59344394	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002556.2	-1	reviewed	p.R722I	1.000	103	0%	69	46.4%	39	56.4%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	HMMPfam_Oxysterol_BP
OSBP	5007	genome.wustl.edu	37	11	59344432	59344432	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002556.2	-1	reviewed	p.G709	0.997	97	0%	66	43.9%	45	48.8%	-	-	-	HMMPfam_Oxysterol_BP
OSBP	5007	genome.wustl.edu	37	11	59361572	59361572	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002556.2	-1	reviewed	p.R490C	1.000	100	1%	54	44.4%	41	56%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Oxysterol_BP
OSBP	5007	genome.wustl.edu	37	11	59367978	59367978	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002556.2	-1	reviewed	p.I434	1.000	338	0.3%	145	37.9%	26	57.6%	-	-	-	HMMPfam_Oxysterol_BP
MRPL16	54948	genome.wustl.edu	37	11	59574260	59574260	+	Missense_Mutation	SNP	G	G	A	rs189178507	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017840.3	-1	reviewed	p.R106C	1.000	71	0%	50	34%	89	43.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ribosomal_L16,superfamily_Ribosomal protein L10e
GIF	2694	genome.wustl.edu	37	11	59599249	59599249	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005142.2	-1	reviewed	p.S365Y	1.000	162	0%	86	37.2%	0	-	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	NULL
MS4A5	64232	genome.wustl.edu	37	11	60201251	60201251	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023945.2	+1	reviewed	p.R118Q	0.000	376	0%	190	37.9%	0	-	benign(0.092)	tolerated(0.33)	neutral(0.031)	HMMPfam_CD20
MS4A10	341116	genome.wustl.edu	37	11	60561444	60561444	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206893.3	+1	validated	e4-1	0.278	87	1.1%	63	36.5%	0	-	-	-	-	-
PTGDR2	11251	genome.wustl.edu	37	11	60621053	60621053	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004778.2	-1	reviewed	p.V48A	0.920	14	0%	19	36.8%	1	0%	benign(0.003)	tolerated(0.4)	neutral(0.016)	superfamily_Family A G protein-coupled receptor-like
ZP1	22917	genome.wustl.edu	37	11	60640951	60640951	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207341.2	+1	validated	p.P448	0.019	27	0%	32	43.8%	0	-	-	-	-	HMMPfam_Zona_pellucida,HMMSmart_ZP,PatternScan_ZP_1
PRPF19	27339	genome.wustl.edu	37	11	60666051	60666051	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014502.4	-1	validated	p.G368*	1.000	62	0%	45	31.1%	88	5.6%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
TMEM132A	54972	genome.wustl.edu	37	11	60695121	60695121	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017870.3	+1	reviewed	p.P108	0.018	51	0%	35	11.4%	71	4.2%	-	-	-	NULL
CD5	921	genome.wustl.edu	37	11	60889151	60889151	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014207.3	+1	validated	p.R292C	0.998	12	0%	10	60%	2	0%	probably_damaging(0.999)	tolerated(0.17)	deleterious(0.549)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
VWCE	220001	genome.wustl.edu	37	11	61026468	61026468	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000301770	-1	known	p.D563N	0.000	17	0%	26	50%	3	66.6%	-	-	-	NULL
DDB1	1642	genome.wustl.edu	37	11	61068359	61068359	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001923.3	-1	validated	p.G1087	0.993	140	0.7%	126	40.5%	201	45.7%	benign(0.002)	tolerated(0.79)	neutral(0.001)	NULL
DDB1	1642	genome.wustl.edu	37	11	61079536	61079536	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001923.3	-1	validated	p.S697N	1.000	70	0%	45	15.6%	153	19.6%	benign(0)	tolerated(1)	-	NULL
DAK	26007	genome.wustl.edu	37	11	61110107	61110107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015533.3	+1	reviewed	p.A251V	0.000	32	0%	25	40%	30	53.3%	benign(0)	tolerated(0.4)	neutral(0.016)	HMMPfam_Dak1,superfamily_DAK1/DegV-like
CYBASC3	220002	genome.wustl.edu	37	11	61121464	61121464	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153611.4	-1	validated	p.A62V	0.972	26	0%	34	58.8%	24	50%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Cytochrom_B561,HMMSmart_B561
TMEM138	51524	genome.wustl.edu	37	11	61133663	61133663	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016464.4	+1	validated	p.S92I	1.000	276	0%	189	20.6%	14	14.2%	probably_damaging(0.978)	deleterious(0.01)	deleterious(0.826)	NULL
CPSF7	79869	genome.wustl.edu	37	11	61178465	61178465	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024811.3	-1	validated	p.N499H	1.000	64	1.6%	49	32.7%	47	46.8%	unknown(0)	tolerated(0.47)	-	NULL
SYT7	9066	genome.wustl.edu	37	11	61290682	61290682	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004200.2	-1	validated	p.T324	0.002	178	0%	143	37.8%	14	50%	-	-	-	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
C11orf9	745	genome.wustl.edu	37	11	61546883	61546883	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127392.1	+1	validated	p.S721L	0.996	5	0.000	9	0.556	0	-	possibly_damaging(0.496)	tolerated(0.13)	neutral(0.418)	NULL
C11orf9	745	genome.wustl.edu	37	11	61547732	61547732	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127392.1	+1	validated	p.R792H	0.995	20	0%	22	54.5%	2	50%	possibly_damaging(0.696)	tolerated(0.29)	neutral(0.279)	NULL
FEN1	2237	genome.wustl.edu	37	11	61563791	61563791	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004111.4	+1	reviewed	p.R320*	1.000	37	0%	31	41.9%	56	25%	-	-	-	superfamily_5' to 3' exonuclease C-terminal subdomain
FADS3	3995	genome.wustl.edu	37	11	61644404	61644404	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021727.3	-1	reviewed	p.R306H	1.000	45	0%	61	44.3%	24	29.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FA_desaturase
AHNAK	79026	genome.wustl.edu	37	11	62286693	62286693	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001620.1	-1	validated	p.G5066W	0.427	184	0.5%	106	48.1%	105	53.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
TUT1	64852	genome.wustl.edu	37	11	62356537	62356537	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000463241	-1	known	p.W120*	1.000	74	0%	48	47.9%	18	38.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
MTA2	9219	genome.wustl.edu	37	11	62361360	62361360	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004739.2	-1	reviewed	p.V665D	1.000	18	0%	25	32%	238	47.4%	benign(0.396)	deleterious(0)	deleterious(0.572)	NULL
MTA2	9219	genome.wustl.edu	37	11	62362898	62362898	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004739.2	-1	reviewed	p.A441T	1.000	130	0%	77	48.1%	87	44.8%	benign(0.002)	tolerated(0.36)	neutral(0.020)	NULL
B3GAT3	26229	genome.wustl.edu	37	11	62384485	62384485	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012200.2	-1	reviewed	p.T198A	1.000	37	0%	29	51.7%	44	54.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Glyco_transf_43,superfamily_SSF53448
C11orf48	79081	genome.wustl.edu	37	11	62435059	62435059	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024099.3	-1	validated	p.G158	0.028	102	0%	71	46.5%	4	50%	unknown(0)	-	-	NULL
HNRNPUL2	221092	genome.wustl.edu	37	11	62489627	62489627	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079559.1	-1	provisional	p.R441C	0.934	31	0%	32	46.9%	171	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZBTB3	79842	genome.wustl.edu	37	11	62520615	62520615	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024784.3	-1	validated	p.S224	0.000	36	0%	40	12.5%	2	0%	-	-	-	NULL
TAF6L	10629	genome.wustl.edu	37	11	62546350	62546350	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006473.2	+1	reviewed	p.A149V	1.000	43	0%	34	38.2%	15	26.6%	benign(0.104)	tolerated(0.2)	neutral(0.057)	NULL
CHRM1	1128	genome.wustl.edu	37	11	62677246	62677246	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000738.2	-1	reviewed	p.R443C	1.000	23	0%	19	57.9%	1	100%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_Family A G protein-coupled receptor-like
CHRM1	1128	genome.wustl.edu	37	11	62677587	62677587	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000738.2	-1	reviewed	p.P329L	1.000	17	0%	25	28%	1	0%	benign(0.015)	tolerated(0.12)	neutral(0.261)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
SLC22A6	9356	genome.wustl.edu	37	11	62749417	62749417	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004790.3	-1	reviewed	p.L232	0.110	16	0%	24	54.2%	0	-	unknown(0)	tolerated(0.15)	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SLC22A8	9376	genome.wustl.edu	37	11	62782192	62782192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004254.3	-1	reviewed	p.P80L	0.004	61	0%	62	43.5%	0	-	benign(0)	tolerated(0.06)	neutral(0.323)	HMMPfam_MFS_1
SLC22A25	387601	genome.wustl.edu	37	11	62951206	62951206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199352.3	-1	validated	p.R305M	0.006	519	0%	203	18.2%	0	-	benign(0.099)	tolerated(0.24)	neutral(0.045)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SLC22A9	114571	genome.wustl.edu	37	11	63149733	63149733	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080866.2	+1	validated	p.L353F	0.000	237	0%	95	43.2%	0	-	benign(0.057)	tolerated(0.43)	neutral(0.017)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
OTUB1	55611	genome.wustl.edu	37	11	63764651	63764651	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017670.2	+1	reviewed	p.R185C	0.513	17	0%	27	33.3%	222	27.9%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_Peptidase_C65,superfamily_Cysteine proteinases
STIP1	10963	genome.wustl.edu	37	11	63961950	63961950	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006819.2	+1	validated	e4-1	1.000	163	0%	85	35.3%	0	-	-	-	-	-
NUDT22	84304	genome.wustl.edu	37	11	63994315	63994315	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128612.1	+1	validated	p.H64R	1.000	6	0.000	12	0.333	79	55.6%	probably_damaging(0.992)	tolerated(0.4)	neutral(0.464)	NULL
PLCB3	5331	genome.wustl.edu	37	11	64029468	64029468	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000932.2	+1	reviewed	p.R653H	0.999	46	0%	47	10.6%	61	8.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PI-PLC-Y,HMMSmart_SM00149,superfamily_PLC-like phosphodiesterases
ESRRA	2101	genome.wustl.edu	37	11	64081786	64081786	+	Missense_Mutation	SNP	C	C	T	rs45585533		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004451.3	+1	reviewed	p.P173L	0.995	10	0.000	7	0.714	33	30.3%	unknown(0)	deleterious(0)	-	superfamily_Nuclear receptor ligand-binding domain
NRXN2	9379	genome.wustl.edu	37	11	64375247	64375247	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015080.2	-1	reviewed	p.V1520	1.000	14	0%	19	21.1%	1	0%	-	-	-	NULL
NRXN2	9379	genome.wustl.edu	37	11	64390230	64390230	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015080.2	-1	reviewed	p.T1390A	1.000	10	0%	11	45.5%	2	0%	possibly_damaging(0.476)	deleterious(0.01)	deleterious(0.562)	NULL
NRXN2	9379	genome.wustl.edu	37	11	64453286	64453286	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000437746	-1	known	p.A118T	1.000	82	0%	86	25.6%	0	-	-	-	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
PYGM	5837	genome.wustl.edu	37	11	64519513	64519513	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005609.2	-1	reviewed	p.E551*	0.999	180	0.6%	150	16%	1	0%	-	-	-	HMMPfam_Phosphorylase,superfamily_SSF53756
CDC42BPG	55561	genome.wustl.edu	37	11	64594829	64594829	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017525.2	-1	validated	p.R1398W	1.000	21	0%	25	24%	49	53%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ATG2A	23130	genome.wustl.edu	37	11	64674868	64674868	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418259	-1	known	p.G699*	0.975	29	0%	26	46.2%	14	85.7%	possibly_damaging(0.767)	tolerated(0.08)	deleterious(0.585)	NULL
ATG2A	23130	genome.wustl.edu	37	11	64675105	64675105	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015104.2	-1	validated	p.A847T	0.106	17	0%	15	60%	5	20%	benign(0.003)	tolerated(1)	-	NULL
GPHA2	170589	genome.wustl.edu	37	11	64702571	64702571	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130769.3	-1	validated	p.H60Q	1.000	11	0.000	7	0.714	2	100%	possibly_damaging(0.733)	deleterious(0.05)	deleterious(0.613)	NULL
ZFPL1	7542	genome.wustl.edu	37	11	64852705	64852705	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000453524	+1	known	p.A74V	0.131	21	0%	17	29.4%	9	88.8%	unknown(0)	tolerated(0.29)	-	NULL
C11orf2	738	genome.wustl.edu	37	11	64878206	64878206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013265.2	+1	provisional	p.L681I	1.000	113	0%	114	12.3%	119	15.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TM7SF2	7108	genome.wustl.edu	37	11	64882969	64882969	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003273.2	+1	validated	p.A332V	1.000	60	0%	62	14.5%	139	11.5%	benign(0.012)	tolerated(0.18)	neutral(0.057)	HMMPfam_ERG4_ERG24
SYVN1	84447	genome.wustl.edu	37	11	64897591	64897591	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172230.2	-1	reviewed	p.T431A	0.000	16	0%	25	44%	52	50%	unknown(0)	tolerated(0.8)	-	NULL
LOC100287960	100287960	genome.wustl.edu	37	11	64913224	64913224	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343095.1	-1	model	p.A105S	1.000	53	0%	20	55%	0	-	-	-	-	HMMPfam_HIG_1_N
SPDYC	387778	genome.wustl.edu	37	11	64938873	64938873	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008778.1	+1	provisional	p.T34	0.018	30	0%	37	40.5%	1	100%	-	-	-	NULL
CAPN1	823	genome.wustl.edu	37	11	64953462	64953462	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005186.2	+1	reviewed	p.F177	0.971	31	0%	26	53.8%	191	50.7%	-	-	-	HMMPfam_Peptidase_C2,HMMSmart_CysPc,superfamily_SSF54001
CAPN1	823	genome.wustl.edu	37	11	64956181	64956181	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005186.2	+1	reviewed	p.R377W	1.000	10	0%	23	60.9%	106	45.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Calpain_III,HMMSmart_calpain_III,superfamily_Peptidase_C2
CAPN1	823	genome.wustl.edu	37	11	64976836	64976836	+	Missense_Mutation	SNP	G	G	A	rs190935218	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005186.2	+1	reviewed	p.R591H	1.000	117	0%	122	45.1%	307	43.9%	possibly_damaging(0.797)	deleterious(0.02)	deleterious(0.682)	HMMSmart_EFh,superfamily_SSF47473
POLA2	23649	genome.wustl.edu	37	11	65061677	65061677	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002689.2	+1	provisional	p.P433H	0.911	142	0%	117	41%	26	34.6%	possibly_damaging(0.753)	tolerated(0.54)	neutral(0.284)	HMMPfam_DNA_pol_E_B
DPF2	5977	genome.wustl.edu	37	11	65107878	65107878	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006268.3	+1	reviewed	p.D19Y	1.000	55	0%	46	39.1%	48	43.7%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
SCYL1	57410	genome.wustl.edu	37	11	65303430	65303430	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020680.3	+1	reviewed	p.H465D	1.000	35	0%	36	22.2%	122	12.2%	benign(0)	tolerated(0.17)	neutral(0.059)	superfamily_ARM repeat
EHBP1L1	254102	genome.wustl.edu	37	11	65350558	65350558	+	Missense_Mutation	SNP	G	G	T	rs184817605	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099409.1	+1	validated	p.E805D	0.000	54	0%	38	36.8%	23	56.5%	benign(0.073)	tolerated(0.43)	neutral(0.018)	NULL
MAP3K11	4296	genome.wustl.edu	37	11	65365772	65365772	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002419.3	-1	reviewed	p.A845V	0.931	6	0.000	5	0.800	57	35%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
MAP3K11	4296	genome.wustl.edu	37	11	65375814	65375814	+	Missense_Mutation	SNP	G	G	A	rs34594252	byCluster	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002419.3	-1	reviewed	p.A282V	0.994	20	0%	26	53.8%	68	47%	possibly_damaging(0.561)	tolerated(0.51)	neutral(0.201)	HMMSmart_TyrKc,superfamily_Kinase_like,HMMPfam_Pkinase
PCNXL3	399909	genome.wustl.edu	37	11	65392707	65392707	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032223.2	+1	validated	p.L995	0.997	28	0%	27	40.7%	30	43.3%	-	-	-	NULL
RELA	5970	genome.wustl.edu	37	11	65426231	65426231	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021975.3	-1	validated	p.G208S	0.999	47	0%	59	54.2%	104	33.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
KAT5	10524	genome.wustl.edu	37	11	65486210	65486210	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182710.1	+1	reviewed	p.I472L	1.000	45	0%	50	48%	50	32%	benign(0.044)	tolerated(0.13)	neutral(0.255)	HMMPfam_MOZ_SAS,superfamily_Acyl-CoA N-acyltransferases (Nat)
CFL1	1072	genome.wustl.edu	37	11	65622870	65622870	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005507.2	-1	validated	p.R146	0.993	25	0%	17	41.2%	1434	43.7%	-	-	-	HMMPfam_Cofilin_ADF,HMMSmart_SM00102,superfamily_Actin depolymerizing proteins
FIBP	9158	genome.wustl.edu	37	11	65655150	65655150	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198897.1	-1	reviewed	p.K111T	1.000	85	0%	57	52.6%	179	47.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_FIBP
BANF1	8815	genome.wustl.edu	37	11	65771208	65771208	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143985.1	+1	reviewed	p.G79R	1.000	71	0%	59	44.1%	421	45.1%	benign(0.031)	tolerated(0.19)	neutral(0.051)	HMMPfam_BAF,superfamily_Barrier-to-autointegration factor BAF
CATSPER1	117144	genome.wustl.edu	37	11	65788061	65788061	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053054.3	-1	reviewed	p.I655	0.999	58	0%	60	31.7%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
KLC2	64837	genome.wustl.edu	37	11	66029413	66029413	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134775.1	+1	validated	p.I143	0.981	14	0%	19	26.3%	39	23%	-	-	-	HMMPfam_Rab5-bind
YIF1A	10897	genome.wustl.edu	37	11	66055641	66055641	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020470.2	-1	validated	p.N52D	1.000	12	0%	19	31.6%	114	51.7%	benign(0.007)	tolerated(0.66)	neutral(0.003)	NULL
BRMS1	25855	genome.wustl.edu	37	11	66108292	66108292	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024957.1	-1	reviewed	p.R163Q	1.000	10	0%	21	57.1%	51	35.2%	possibly_damaging(0.478)	deleterious(0.01)	deleterious(0.564)	HMMPfam_Sds3
BRMS1	25855	genome.wustl.edu	37	11	66108691	66108691	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024957.1	-1	reviewed	p.R115H	0.999	21	0%	23	30.4%	46	47.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sds3
B3GNT1	11041	genome.wustl.edu	37	11	66114164	66114164	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006876.2	-1	reviewed	p.R285W	1.000	11	0%	13	38.5%	15	46.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BBS1	582	genome.wustl.edu	37	11	66297335	66297335	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024649.4	+1	reviewed	p.R462H	1.000	14	0%	20	50%	31	45.1%	possibly_damaging(0.736)	tolerated(0.12)	deleterious(0.530)	NULL
ACTN3	89	genome.wustl.edu	37	11	66322638	66322638	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001104.1	+1	reviewed	p.R199*	1.000	39	0%	40	45%	0	-	-	-	-	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
CTSF	8722	genome.wustl.edu	37	11	66333817	66333817	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003793.3	-1	reviewed	p.Q222H	1.000	58	0%	63	23.8%	20	10%	probably_damaging(0.997)	tolerated(0.06)	deleterious(0.788)	HMMPfam_Inhibitor_I29
RBM14	10432	genome.wustl.edu	37	11	66393144	66393144	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006328.3	+1	validated	p.S599	0.999	11	0%	20	45%	61	45.9%	-	-	-	NULL
SPTBN2	6712	genome.wustl.edu	37	11	66455038	66455038	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006946.2	-1	reviewed	p.M2194I	0.825	4	0.000	12	0.500	16	50%	benign(0.071)	tolerated(0.45)	neutral(0.017)	HMMSmart_SM00150
SPTBN2	6712	genome.wustl.edu	37	11	66478433	66478433	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006946.2	-1	reviewed	p.F280L	1.000	63	0%	54	42.6%	17	52.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CH,superfamily_Calponin-homology domain CH-domain
C11orf80	79703	genome.wustl.edu	37	11	66515980	66515980	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024650.3	+1	validated	p.V103A	1.000	230	0%	132	10.6%	4	0%	unknown(0)	deleterious(0.03)	-	NULL
PC	5091	genome.wustl.edu	37	11	66620276	66620276	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000920.3	-1	reviewed	p.P515	0.459	38	0%	44	45.5%	10	40%	-	-	-	NULL
SYT12	91683	genome.wustl.edu	37	11	66807630	66807630	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177963.3	+1	reviewed	p.R193C	1.000	14	0%	13	76.9%	5	40%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
KDM2A	22992	genome.wustl.edu	37	11	66983344	66983344	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012308.2	+1	reviewed	p.V204A	1.000	409	0%	277	44.4%	40	55%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00558,HMMPfam_JmjC,superfamily_Clavaminate synthase-like
ADRBK1	156	genome.wustl.edu	37	11	67048957	67048957	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001619.3	+1	reviewed	p.K225N	1.000	21	0%	26	30.8%	106	40.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
SSH3	54961	genome.wustl.edu	37	11	67074413	67074413	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017857.3	+1	validated	p.G148	0.519	28	0%	32	50%	26	26.9%	-	-	-	NULL
TBC1D10C	374403	genome.wustl.edu	37	11	67174444	67174444	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198517.2	+1	provisional	p.P265	1.000	17	0%	16	43.8%	3	0%	-	-	-	HMMPfam_TBC,HMMSmart_TBC,superfamily_RabGAP_TBC
PPP1CA	5499	genome.wustl.edu	37	11	67186935	67186935	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000451458	-1	known	p.G97D	0.002	7	0.000	11	0.455	2	50%	benign(0.01)	deleterious(0.01)	neutral(0.406)	NULL
GPR152	390212	genome.wustl.edu	37	11	67218934	67218934	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206997.1	-1	validated	p.S421Y	0.002	43	0%	37	51.4%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
GPR152	390212	genome.wustl.edu	37	11	67219398	67219398	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206997.1	-1	validated	p.D266	0.975	16	0%	16	25%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
CABP4	57010	genome.wustl.edu	37	11	67225891	67225891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145200.3	+1	reviewed	p.A234V	0.993	39	0%	28	21.4%	1	0%	benign(0.083)	tolerated(0.25)	neutral(0.043)	HMMSmart_SM00054,HMMPfam_efhand,superfamily_EF-hand
PITPNM1	9600	genome.wustl.edu	37	11	67265041	67265041	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004910.2	-1	validated	p.R631H	0.931	12	0%	12	50%	40	50%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	NULL
PITPNM1	9600	genome.wustl.edu	37	11	67269544	67269544	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004910.2	-1	validated	p.I143	0.985	13	0%	13	46.2%	32	46.8%	-	-	-	HMMPfam_IP_trans,superfamily_Bet v1-like
NDUFV1	4723	genome.wustl.edu	37	11	67378977	67378977	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007103.3	+1	reviewed	p.F339	0.998	16	0%	26	46.2%	208	36.5%	-	-	-	NULL
ACY3	91703	genome.wustl.edu	37	11	67412589	67412589	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080658.1	-1	validated	p.L187	0.913	25	0%	21	28.6%	0	-	-	-	-	HMMPfam_AstE_AspA
ALDH3B2	222	genome.wustl.edu	37	11	67431886	67431886	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000695.3	-1	reviewed	p.A285V	1.000	11	0%	23	30.4%	4	25%	benign(0.134)	tolerated(0.88)	neutral(0.011)	HMMPfam_Aldedh,superfamily_ALDH-like
NDUFS8	4728	genome.wustl.edu	37	11	67803719	67803719	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002496.3	+1	reviewed	e5-1	1.000	13	0%	12	41.7%	42	95.2%	-	-	-	-
TCIRG1	10312	genome.wustl.edu	37	11	67811329	67811329	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006019.2	+1	reviewed	p.L254	0.000	11	0%	17	35.3%	32	43.7%	-	-	-	HMMPfam_V_ATPase_I
TCIRG1	10312	genome.wustl.edu	37	11	67816587	67816587	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006019.2	+1	reviewed	p.L571	0.992	42	0%	38	50%	49	36.7%	-	-	-	HMMPfam_V_ATPase_I
TCIRG1	10312	genome.wustl.edu	37	11	67817500	67817500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006019.2	+1	reviewed	p.K695N	0.912	24	0%	20	30%	79	34.1%	benign(0.124)	tolerated(0.4)	neutral(0.026)	HMMPfam_V_ATPase_I
CHKA	1119	genome.wustl.edu	37	11	67833940	67833940	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001277.2	-1	reviewed	p.Q324H	1.000	364	0%	177	44.6%	42	42.8%	benign(0.27)	tolerated(0.11)	neutral(0.301)	HMMPfam_Choline_kinase,superfamily_Protein kinase-like (PK-like)
PPP6R3	55291	genome.wustl.edu	37	11	68338536	68338536	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018312.4	+1	validated	p.R385Q	1.000	526	0%	236	35.6%	15	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_SAPS
CPT1A	1374	genome.wustl.edu	37	11	68540785	68540785	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001876.3	-1	reviewed	p.R563H	0.150	68	0%	55	43.6%	13	30.7%	probably_damaging(0.963)	tolerated(0.11)	deleterious(0.677)	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases
MRGPRD	116512	genome.wustl.edu	37	11	68747819	68747819	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198923.2	-1	validated	p.R213W	0.003	30	0%	25	16%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
TPCN2	219931	genome.wustl.edu	37	11	68830358	68830358	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139075.3	+1	reviewed	p.R185W	0.996	37	2.7%	47	51.1%	14	35.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
ANO1	55107	genome.wustl.edu	37	11	69978084	69978084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018043.5	+1	validated	p.C386Y	1.000	19	0%	18	38.9%	8	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ANO1	55107	genome.wustl.edu	37	11	70007357	70007357	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018043.5	+1	validated	p.R557W	0.962	30	0%	25	40%	10	10%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
PPFIA1	8500	genome.wustl.edu	37	11	70118340	70118340	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003626.2	+1	reviewed	p.G21D	1.000	21	0%	30	26.7%	8	87.5%	benign(0.004)	tolerated(0.08)	neutral(0.300)	NULL
MIR548K	100313770	genome.wustl.edu	37	11	70130104	70130104	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000408406	+1	known	NULL	0.001	342	0%	159	46.5%	0	-	-	-	-	-
PPFIA1	8500	genome.wustl.edu	37	11	70171044	70171044	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003626.2	+1	reviewed	p.G153D	0.999	30	0%	18	55.6%	21	38%	probably_damaging(0.985)	tolerated(0.05)	deleterious(0.777)	NULL
CTTN	2017	genome.wustl.edu	37	11	70269062	70269062	+	Silent	SNP	C	C	T	rs190841561	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005231.3	+1	reviewed	p.F306	0.987	182	0%	185	45.9%	87	79.3%	unknown(0)	-	-	HMMPfam_HS1_rep
SHANK2	22941	genome.wustl.edu	37	11	70331580	70331580	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012309.3	-1	reviewed	p.G1011	0.016	49	0%	39	23.1%	5	20%	-	-	-	NULL
SHANK2	22941	genome.wustl.edu	37	11	70348347	70348347	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012309.3	-1	reviewed	p.R160C	1.000	12	0%	27	37%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SHANK2	22941	genome.wustl.edu	37	11	70829966	70829966	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000338508	-1	known	p.A107V	1.000	33	0%	39	33.3%	7	42.8%	possibly_damaging(0.736)	deleterious(0.01)	deleterious(0.675)	NULL
DHCR7	1717	genome.wustl.edu	37	11	71155072	71155072	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001360.2	-1	reviewed	p.A96	0.007	10	0%	12	41.7%	50	60%	-	-	-	NULL
KRTAP5-8	57830	genome.wustl.edu	37	11	71249298	71249298	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021046.2	+1	validated	p.S66Y	0.000	43	0%	66	34.8%	0	-	unknown(0)	tolerated(0.13)	-	NULL
KRTAP5-9	3846	genome.wustl.edu	37	11	71259761	71259761	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005553.3	+1	validated	p.S20G	0.994	33	0%	40	50%	0	-	unknown(0)	tolerated(0.25)	-	NULL
NUMA1	4926	genome.wustl.edu	37	11	71725098	71725098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006185.2	-1	validated	p.E1151K	0.041	16	0%	10	60%	140	52.1%	possibly_damaging(0.791)	tolerated(0.33)	neutral(0.321)	NULL
NUMA1	4926	genome.wustl.edu	37	11	71726953	71726953	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006185.2	-1	validated	p.Q532	1.000	62	0%	55	12.7%	82	24.3%	-	-	-	superfamily_Prefoldin
NUMA1	4926	genome.wustl.edu	37	11	71734140	71734140	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006185.2	-1	validated	p.L88	0.232	116	0%	66	37.9%	49	48.9%	-	-	-	NULL
LAMTOR1	55004	genome.wustl.edu	37	11	71809842	71809842	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017907.1	-1	provisional	p.R84H	1.000	18	0%	22	36.4%	218	45.4%	unknown(0)	-	-	NULL
INPPL1	3636	genome.wustl.edu	37	11	71939417	71939417	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001567.3	+1	reviewed	p.R91H	1.000	17	0%	22	50%	54	48.1%	probably_damaging(0.998)	tolerated(0.56)	deleterious(0.481)	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550
INPPL1	3636	genome.wustl.edu	37	11	71948375	71948375	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001567.3	+1	reviewed	p.H1029	0.502	12	0%	23	39.1%	120	47.5%	-	-	-	NULL
CLPB	81570	genome.wustl.edu	37	11	72040814	72040814	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030813.3	-1	provisional	p.H300	1.000	131	0%	71	47.9%	7	57.1%	-	-	-	HMMPfam_Ank,superfamily_Ankyrin repeat
PDE2A	5138	genome.wustl.edu	37	11	72296417	72296417	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002599.3	-1	validated	p.E428D	1.000	42	0%	54	50%	1	0%	benign(0.04)	tolerated(0.11)	neutral(0.274)	HMMPfam_GAF,HMMSmart_SM00065,superfamily_GAF domain-like
P2RY2	5029	genome.wustl.edu	37	11	72945967	72945967	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002564.2	+1	reviewed	p.A255T	0.472	22	0%	20	35%	5	60%	benign(0.004)	deleterious(0.04)	neutral(0.349)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RELT	84957	genome.wustl.edu	37	11	73101935	73101935	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032871.3	+1	reviewed	p.R86*	0.001	16	0%	27	51.9%	7	14.2%	-	-	-	HMMSmart_TNFR
C2CD3	26005	genome.wustl.edu	37	11	73789451	73789451	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015531.4	-1	validated	p.R1438C	0.996	59	1.7%	49	40.8%	18	77.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C2CD3	26005	genome.wustl.edu	37	11	73829348	73829348	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015531.4	-1	validated	p.A482D	0.000	264	0.8%	101	42.6%	1	100%	benign(0.001)	deleterious(0.01)	neutral(0.406)	NULL
NEU3	10825	genome.wustl.edu	37	11	74716968	74716968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006656.5	+1	reviewed	p.L273I	0.997	45	0%	23	60.9%	3	66.6%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Sialidase
NEU3	10825	genome.wustl.edu	37	11	74717222	74717222	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006656.5	+1	reviewed	p.P357	0.000	68	0%	42	42.9%	7	71.4%	-	-	-	superfamily_Sialidase
OR2AT4	341152	genome.wustl.edu	37	11	74800064	74800064	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005285.1	-1	provisional	p.R232H	0.967	52	0%	24	58.3%	0	-	benign(0.053)	tolerated(0.07)	neutral(0.323)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
SLCO2B1	11309	genome.wustl.edu	37	11	74880247	74880247	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007256.3	+1	validated	p.L160M	1.000	42	0%	35	48.6%	3	0%	benign(0.108)	deleterious(0.02)	neutral(0.392)	HMMPfam_OATP,superfamily_MFS general substrate transporter
RPS3	6188	genome.wustl.edu	37	11	75115080	75115080	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005.3	+1	reviewed	p.L123	1.000	103	0%	67	46.3%	3440	45.8%	benign(0)	tolerated(0.1)	neutral(0.286)	HMMPfam_Ribosomal_S3_C,superfamily_Ribosomal protein S3 C-terminal domain
GDPD5	81544	genome.wustl.edu	37	11	75154243	75154243	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030792.6	-1	validated	p.P296T	0.047	16	0%	12	50%	2	100%	benign(0.332)	tolerated(0.23)	neutral(0.145)	HMMPfam_GDPD,superfamily_PLC-like phosphodiesterases
MAP6	4135	genome.wustl.edu	37	11	75379374	75379374	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033063.1	-1	reviewed	p.R14H	1.000	7	0.000	5	0.800	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_STOP
OMP	4975	genome.wustl.edu	37	11	76814283	76814283	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006189.1	+1	reviewed	p.A133V	1.000	7	0.000	12	0.417	1	100%	benign(0.034)	deleterious(0)	neutral(0.447)	HMMPfam_Olfactory_mark,superfamily_Olfactory_marker
MYO7A	4647	genome.wustl.edu	37	11	76917144	76917144	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000260.3	+1	reviewed	p.N1880S	0.996	37	0%	40	17.5%	3	0%	benign(0.081)	tolerated(0.57)	neutral(0.012)	HMMPfam_MyTH4,HMMSmart_SM00139
GDPD4	220032	genome.wustl.edu	37	11	76956411	76956411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182833.1	-1	provisional	p.R334H	0.001	438	0%	270	45.6%	0	-	benign(0.247)	tolerated(0.12)	neutral(0.286)	HMMPfam_GDPD,superfamily_PLC-like_Pdiesterase_TIM-brl
GDPD4	220032	genome.wustl.edu	37	11	76980112	76980112	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182833.1	-1	provisional	p.L161	0.917	118	0%	47	38.3%	0	-	-	-	-	NULL
C11orf67	28971	genome.wustl.edu	37	11	77580824	77580824	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024684.2	+1	predicted	p.Q63H	0.996	241	0%	150	40%	88	44.3%	possibly_damaging(0.465)	deleterious(0.03)	deleterious(0.517)	HMMPfam_DUF498,superfamily_Hypothetical protein MT938 (MTH938)
INTS4	92105	genome.wustl.edu	37	11	77614592	77614592	+	Silent	SNP	C	C	T	rs12532775	by2Hit2Allele;byHapMap	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033547.3	-1	validated	p.A697	1.000	98	3.1%	58	53.4%	22	40.9%	-	-	-	NULL
KCTD14	65987	genome.wustl.edu	37	11	77727774	77727774	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023930.3	-1	validated	p.S211	0.000	164	0%	98	12.2%	52	5.7%	-	-	-	NULL
ALG8	79053	genome.wustl.edu	37	11	77815464	77815464	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024079.4	-1	reviewed	p.I405S	0.837	263	0%	147	46.3%	39	33.3%	benign(0.002)	tolerated(0.4)	neutral(0.016)	HMMPfam_Alg6_Alg8
KCTD21	283219	genome.wustl.edu	37	11	77884839	77884839	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029859.1	-1	provisional	p.I254	0.998	39	0%	29	48.3%	5	40%	-	-	-	NULL
KCTD21	283219	genome.wustl.edu	37	11	77885195	77885195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029859.1	-1	provisional	p.L136F	1.000	74	0%	61	50.8%	11	54.5%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
GAB2	9846	genome.wustl.edu	37	11	77931374	77931374	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080491.2	-1	reviewed	p.P626	0.996	14	0%	18	61.1%	8	62.5%	-	-	-	NULL
NARS2	79731	genome.wustl.edu	37	11	78147834	78147834	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024678.4	-1	validated	p.S439F	1.000	150	0%	74	50%	50	46%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases
ODZ4	26011	genome.wustl.edu	37	11	78369475	78369475	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098816.2	-1	validated	p.N2646	0.773	37	0%	49	28.6%	8	62.5%	-	-	-	NULL
ODZ4	26011	genome.wustl.edu	37	11	78381549	78381549	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098816.2	-1	validated	p.F1947	0.901	52	0%	42	50%	0	-	-	-	-	NULL
ODZ4	26011	genome.wustl.edu	37	11	78412977	78412977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098816.2	-1	validated	p.R1561W	1.000	67	0%	53	45.3%	2	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_NHL,superfamily_SSF101898,superfamily_TolB_C
ODZ4	26011	genome.wustl.edu	37	11	78419504	78419504	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098816.2	-1	validated	p.R1371C	1.000	56	0%	36	11.1%	5	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_SSF101898,superfamily_TolB_C
ODZ4	26011	genome.wustl.edu	37	11	78574091	78574091	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098816.2	-1	validated	p.P391S	1.000	27	0%	28	50%	1	100%	possibly_damaging(0.822)	tolerated(0.21)	neutral(0.355)	NULL
RAB30	27314	genome.wustl.edu	37	11	82698772	82698772	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014488.3	-1	provisional	p.S73Y	1.000	142	0%	53	41.5%	8	37.5%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
DLG2	1740	genome.wustl.edu	37	11	83182744	83182744	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142699.1	-1	reviewed	p.L791M	1.000	100	0%	36	19.4%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_SH3-domain,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
TMEM126A	84233	genome.wustl.edu	37	11	85365187	85365187	+	Missense_Mutation	SNP	G	G	A	rs192269199	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032273.3	+1	validated	p.R56H	0.967	195	0%	87	34.5%	46	34.7%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMPfam_DUF1370
CCDC89	220388	genome.wustl.edu	37	11	85396115	85396115	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152723.1	-1	provisional	p.K353N	1.000	101	0%	78	38.5%	0	-	possibly_damaging(0.589)	deleterious(0)	deleterious(0.647)	NULL
SYTL2	54843	genome.wustl.edu	37	11	85407283	85407283	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206927.2	-1	reviewed	p.D1206N	1.000	221	0%	112	45.5%	0	-	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SYTL2	54843	genome.wustl.edu	37	11	85437245	85437245	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206927.2	-1	reviewed	p.E85D	0.046	747	0%	331	42.3%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	NULL
SYTL2	54843	genome.wustl.edu	37	11	85437514	85437514	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000359152	-1	known	p.S520P	0.479	99	0%	49	49%	0	-	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	NULL
PICALM	8301	genome.wustl.edu	37	11	85711815	85711815	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007166.2	-1	validated	p.R342H	1.000	190	0%	84	38.1%	56	42.8%	benign(0.309)	deleterious(0.02)	deleterious(0.480)	NULL
EED	8726	genome.wustl.edu	37	11	85963241	85963241	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003797.2	+1	reviewed	p.E107K	1.000	384	0%	159	37.1%	15	20%	benign(0.002)	tolerated(0.79)	neutral(0.001)	HMMSmart_SM00320,superfamily_WD40 repeat-like
EED	8726	genome.wustl.edu	37	11	85989563	85989563	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003797.2	+1	reviewed	p.R441Q	1.000	104	0%	68	54.4%	35	22.8%	benign(0.07)	tolerated(0.23)	neutral(0.046)	NULL
CCDC81	60494	genome.wustl.edu	37	11	86097148	86097148	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021827.4	+1	validated	p.L45	0.656	180	0.6%	59	39%	0	-	-	-	-	NULL
ME3	10873	genome.wustl.edu	37	11	86161399	86161399	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001014811.1	-1	reviewed	p.R321*	0.581	66	0%	43	51.2%	4	50%	-	-	-	HMMPfam_Malic_M,superfamily_NAD(P)-bd
PRSS23	11098	genome.wustl.edu	37	11	86519220	86519220	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007173.4	+1	validated	p.D179N	1.000	27	0%	24	29.2%	21	4.7%	possibly_damaging(0.537)	tolerated(0.3)	neutral(0.210)	HMMPfam_Trypsin,superfamily_Trypsin-like serine proteases
PRSS23	11098	genome.wustl.edu	37	11	86519543	86519543	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007173.4	+1	validated	p.R286	0.371	51	0%	42	31%	28	7.1%	-	-	-	superfamily_Trypsin-like serine proteases
TMEM135	65084	genome.wustl.edu	37	11	87024514	87024514	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022918.3	+1	validated	p.L328	0.812	230	0%	65	50.8%	8	87.5%	-	-	-	NULL
RAB38	23682	genome.wustl.edu	37	11	87847293	87847293	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022337.1	-1	provisional	p.D167N	0.997	62	0%	33	39.4%	6	16.6%	benign(0.01)	tolerated(0.31)	neutral(0.028)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
GRM5	2915	genome.wustl.edu	37	11	88301141	88301141	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143831.2	-1	reviewed	p.V570	0.717	59	0%	33	33.3%	0	-	-	-	-	NULL
GRM5	2915	genome.wustl.edu	37	11	88780544	88780544	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143831.2	-1	reviewed	p.N166S	1.000	46	0%	22	45.5%	0	-	benign(0.212)	tolerated(0.25)	neutral(0.057)	HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,superfamily_Periplasmic binding protein-like I
GRM5	2915	genome.wustl.edu	37	11	88780715	88780715	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143831.2	-1	reviewed	p.S109N	1.000	65	0%	50	42%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
TYR	7299	genome.wustl.edu	37	11	88911554	88911554	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000372.4	+1	reviewed	p.I145V	0.259	83	0%	42	16.7%	0	-	benign(0)	tolerated(0.57)	neutral(0.006)	superfamily_Di-copper centre-containing domain
NOX4	50507	genome.wustl.edu	37	11	89075329	89075329	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016931.3	-1	reviewed	p.F417S	1.000	84	0%	25	40%	0	-	benign(0.001)	tolerated(0.29)	neutral(0.029)	HMMPfam_FAD_binding_8,superfamily_Riboflavin synthase domain-like,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain
ENSG00000234376	0	genome.wustl.edu	37	11	89486524	89486524	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000411859	-1	known	p.S204Y	0.676	412	0%	138	26.8%	0	-	-	-	-	NULL
ENSG00000204456	0	genome.wustl.edu	37	11	89500057	89500057	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000375974	-1	known	p.D103	0.001	247	0%	122	23.8%	0	-	-	-	-	HMMPfam_SPRY
TRIM77P	390231	genome.wustl.edu	37	11	89515172	89515172	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398290	+1	known	p.S328N	0.041	129	0%	82	25.6%	0	-	-	-	-	NULL
TRIM77P	390231	genome.wustl.edu	37	11	89515524	89515524	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398290	+1	known	p.F445L	0.005	308	0%	181	24.9%	0	-	-	-	-	HMMPfam_SPRY
TRIM49	57093	genome.wustl.edu	37	11	89531586	89531586	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020358.2	-1	reviewed	p.V357	0.005	239	0%	121	28.9%	0	-	-	-	-	HMMPfam_SPRY
NAALAD2	10003	genome.wustl.edu	37	11	89914816	89914816	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005467.3	+1	reviewed	p.F629L	1.000	186	0%	73	35.6%	0	-	possibly_damaging(0.544)	deleterious(0)	deleterious(0.629)	HMMPfam_TFR_dimer,superfamily_Transferrin receptor ectodomain C-terminal domain
FAT3	120114	genome.wustl.edu	37	11	92086330	92086330	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.G351V	1.000	127	0%	40	45%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92087078	92087078	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.V600	0.996	128	0%	48	39.6%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92088267	92088267	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.E997*	1.000	104	0%	58	50%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92531122	92531122	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.S1648F	0.966	57	0%	37	43.2%	0	-	benign(0.048)	tolerated(0.19)	neutral(0.053)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92534203	92534203	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.S2675L	0.999	81	1.2%	42	35.7%	0	-	possibly_damaging(0.912)	tolerated(0.06)	deleterious(0.686)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92534700	92534700	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.M2841V	0.021	58	0%	36	27.8%	0	-	benign(0)	tolerated(0.34)	neutral(0.023)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92543010	92543010	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.G3083	0.691	118	0%	43	32.6%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92573920	92573920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.V3521I	0.996	76	0%	40	45%	0	-	benign(0.001)	tolerated(1)	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92577632	92577632	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008781.2	+1	validated	p.D3700G	1.000	15	0%	16	25%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_Concanavalin A-like lectins/glucanases
SLC36A4	120103	genome.wustl.edu	37	11	92895934	92895934	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152313.2	-1	provisional	p.G325	0.995	265	0%	68	44.1%	25	40%	-	-	-	HMMPfam_Aa_trans
SLC36A4	120103	genome.wustl.edu	37	11	92918856	92918856	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152313.2	-1	provisional	e2+1	1.000	137	0%	80	30%	0	-	-	-	-	-
KIAA1731	85459	genome.wustl.edu	37	11	93431304	93431304	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033395.1	+1	validated	p.E1076K	0.003	72	0%	44	13.6%	6	33.3%	possibly_damaging(0.875)	tolerated(0.08)	deleterious(0.640)	NULL
KIAA1731	85459	genome.wustl.edu	37	11	93460384	93460384	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033395.1	+1	validated	p.F2248V	0.247	171	0%	66	42.4%	6	83.3%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
KIAA1731	85459	genome.wustl.edu	37	11	93463403	93463403	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033395.1	+1	validated	p.L2592	0.994	382	0%	137	32.8%	23	34.7%	-	-	-	NULL
HEPHL1	341208	genome.wustl.edu	37	11	93797647	93797647	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098672.1	+1	validated	p.A260D	1.000	270	0%	84	45.2%	0	-	benign(0.406)	tolerated(0.37)	neutral(0.149)	superfamily_Cupredoxin,HMMPfam_Cu-oxidase_2
HEPHL1	341208	genome.wustl.edu	37	11	93803555	93803555	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098672.1	+1	validated	p.Q360R	0.109	91	0%	21	42.9%	1	0%	possibly_damaging(0.811)	tolerated(0.22)	neutral(0.347)	PatternScan_MULTICOPPER_OXIDASE1,superfamily_Cupredoxin,HMMPfam_Cu-oxidase_2
PIWIL4	143689	genome.wustl.edu	37	11	94353164	94353164	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152431.2	+1	validated	p.Y766H	1.000	68	0%	42	35.7%	9	44.4%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Piwi,superfamily_Ribonuclease H-like
AMOTL1	154810	genome.wustl.edu	37	11	94563241	94563241	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130847.2	+1	reviewed	p.S480L	1.000	109	0%	66	30.3%	7	42.8%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ENDOD1	23052	genome.wustl.edu	37	11	94861921	94861921	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015036.2	+1	validated	p.V227	0.002	81	0%	73	11%	21	9.5%	-	-	-	HMMPfam_Endonuclease_NS,HMMSmart_NUC,superfamily_SSF54060
SESN3	143686	genome.wustl.edu	37	11	94910992	94910992	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144665.2	-1	provisional	p.R380W	1.000	146	0.7%	46	43.5%	21	38%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PA26
FAM76B	143684	genome.wustl.edu	37	11	95516367	95516367	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144664.4	-1	validated	p.T142M	1.000	431	0.5%	204	12.3%	7	14.2%	-	-	-	NULL
MAML2	84441	genome.wustl.edu	37	11	95825392	95825392	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032427.1	-1	validated	p.Q601H	0.931	86	0%	109	16.5%	8	50%	unknown(0)	deleterious(0)	-	NULL
MAML2	84441	genome.wustl.edu	37	11	95825401	95825401	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032427.1	-1	validated	p.Q598H	0.000	89	0%	122	32%	8	25%	unknown(0)	tolerated(0.08)	-	NULL
CCDC82	79780	genome.wustl.edu	37	11	96098310	96098310	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024725.3	-1	validated	p.R405Q	1.000	131	0%	66	45.5%	5	60%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	NULL
CCDC82	79780	genome.wustl.edu	37	11	96117829	96117829	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024725.3	-1	validated	p.R28Q	1.000	365	0%	153	49%	8	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
JRKL	8690	genome.wustl.edu	37	11	96124380	96124380	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003772.3	+1	reviewed	p.R189	0.000	44	0%	37	48.6%	11	54.5%	-	-	-	HMMPfam_DDE
CNTN5	53942	genome.wustl.edu	37	11	99827648	99827648	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014361.2	+1	reviewed	p.S262A	0.997	138	0%	66	42.4%	0	-	possibly_damaging(0.596)	tolerated(0.06)	deleterious(0.528)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
ARHGAP42	143872	genome.wustl.edu	37	11	100847645	100847645	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152432.2	+1	provisional	p.C779Y	1.000	128	0%	40	40%	11	45.4%	benign(0.139)	tolerated(0.07)	neutral(0.331)	NULL
PGR	5241	genome.wustl.edu	37	11	100920777	100920777	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000926.4	-1	reviewed	p.E791*	1.000	163	0%	29	41.4%	5	20%	-	-	-	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
PGR	5241	genome.wustl.edu	37	11	100962529	100962529	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000926.4	-1	reviewed	p.R623H	1.000	168	0%	79	46.8%	1	100%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
YAP1	10413	genome.wustl.edu	37	11	101984924	101984924	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130145.1	+1	reviewed	p.R124Q	1.000	36	0%	32	50%	60	43.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
BIRC3	330	genome.wustl.edu	37	11	102195745	102195745	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001165.3	+1	reviewed	p.E169K	0.984	104	0%	52	53.8%	4	50%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMSmart_BIR,PatternScan_BIR_REPEAT_1,superfamily_SSF57924
MMP20	9313	genome.wustl.edu	37	11	102448128	102448128	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004771.3	-1	reviewed	p.T461A	0.976	518	0%	196	37.8%	0	-	benign(0)	tolerated(0.21)	neutral(0.044)	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120
MMP27	64066	genome.wustl.edu	37	11	102576388	102576389	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022122.2	-1	reviewed	p.V20fs	0.001:0.066	-	-	-	-	-	-	-	-	-	NULL
MMP10	4319	genome.wustl.edu	37	11	102646042	102646042	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002425.2	-1	reviewed	p.R315*	1.000	235	0%	73	56.2%	2	0%	-	-	-	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120
MMP1	4312	genome.wustl.edu	37	11	102662129	102662129	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002421.3	-1	reviewed	p.I377	0.070	253	0.4%	100	48%	4	0%	-	-	-	superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX
MMP1	4312	genome.wustl.edu	37	11	102667759	102667759	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002421.3	-1	reviewed	p.S162Y	0.670	102	0%	34	29.4%	7	14.2%	possibly_damaging(0.929)	deleterious(0)	deleterious(0.821)	HMMPfam_Peptidase_M10,HMMSmart_ZnMc,superfamily_SSF55486
DYNC2H1	79659	genome.wustl.edu	37	11	102991496	102991496	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080463.1	+1	reviewed	p.N405H	0.997	204	0%	59	54.2%	0	-	benign(0.133)	tolerated(0.07)	neutral(0.330)	HMMPfam_DHC_N1
DYNC2H1	79659	genome.wustl.edu	37	11	103031686	103031686	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080463.1	+1	reviewed	p.E1468	0.980	230	0%	65	41.5%	1	0%	-	-	-	HMMPfam_DHC_N2
DYNC2H1	79659	genome.wustl.edu	37	11	103182692	103182692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080463.1	+1	reviewed	p.R3867Q	0.999	169	0%	51	43.1%	1	0%	possibly_damaging(0.827)	deleterious(0)	deleterious(0.758)	HMMPfam_Dynein_heavy
PDGFD	80310	genome.wustl.edu	37	11	103814233	103814233	+	Missense_Mutation	SNP	T	T	C	rs12797918		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025208.4	-1	reviewed	p.Y240C	0.996	161	0%	39	51.3%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CASP4	837	genome.wustl.edu	37	11	104825612	104825612	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001225.3	-1	reviewed	p.K42Q	0.001	499	0%	124	37.9%	15	33.3%	benign(0.253)	tolerated(0.14)	neutral(0.276)	HMMPfam_CARD,HMMSmart_SM00114,superfamily_DEATH domain
CASP1	834	genome.wustl.edu	37	11	104904956	104904956	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033292.2	-1	reviewed	p.G85W	0.012	253	0%	102	36.3%	7	14.2%	possibly_damaging(0.755)	deleterious(0.02)	deleterious(0.661)	HMMPfam_CARD,HMMSmart_SM00114,superfamily_DEATH domain
GRIA4	2893	genome.wustl.edu	37	11	105623764	105623764	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000829.3	+1	reviewed	p.S102L	1.000	224	0%	67	41.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ANF_receptor,superfamily_SSF53822
KBTBD3	143879	genome.wustl.edu	37	11	105924646	105924646	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152433.3	-1	validated	p.N257T	0.996	148	0%	60	25%	1	100%	benign(0.006)	tolerated(1)	-	NULL
GUCY1A2	2977	genome.wustl.edu	37	11	106558441	106558441	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000855.1	-1	validated	p.S678F	1.000	145	0%	59	11.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Guanylate_cyc,superfamily_Adenylyl and guanylyl cyclase catalytic domain
CUL5	8065	genome.wustl.edu	37	11	107965643	107965643	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003478.3	+1	validated	p.V558I	1.000	161	0%	67	50.7%	3	33.3%	probably_damaging(0.965)	tolerated(0.55)	neutral(0.414)	HMMPfam_Cullin,HMMSmart_SM00182,superfamily_Cullin homology domain
ATM	472	genome.wustl.edu	37	11	108119762	108119762	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000051.3	+1	reviewed	p.E390*	1.000	320	0%	127	42.5%	1	0%	-	-	-	superfamily_ARM repeat
ATM	472	genome.wustl.edu	37	11	108123632	108123632	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000051.3	+1	reviewed	p.P631S	0.701	449	0%	203	43.3%	1	0%	benign(0.002)	tolerated(0.17)	neutral(0.059)	superfamily_ARM repeat
ATM	472	genome.wustl.edu	37	11	108170568	108170568	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000051.3	+1	reviewed	p.T1711	1.000	403	0%	127	36.2%	2	100%	-	-	-	superfamily_ARM repeat
ATM	472	genome.wustl.edu	37	11	108186742	108186742	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000051.3	+1	reviewed	p.R2034*	0.834	192	0%	82	37.8%	7	42.8%	-	-	-	superfamily_ARM repeat
ATM	472	genome.wustl.edu	37	11	108202657	108202657	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000051.3	+1	reviewed	p.L2561M	0.439	363	0.6%	143	41.3%	4	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_ARM repeat
C11orf65	160140	genome.wustl.edu	37	11	108263997	108263997	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152587.3	-1	validated	p.D223E	0.561	537	0%	269	49.4%	0	-	benign(0.002)	tolerated(0.25)	neutral(0.037)	NULL
EXPH5	23086	genome.wustl.edu	37	11	108383772	108383772	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015065.2	-1	validated	p.S821Y	0.000	203	0%	142	52.8%	2	0%	possibly_damaging(0.924)	deleterious(0)	deleterious(0.818)	NULL
DDX10	1662	genome.wustl.edu	37	11	108586632	108586632	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004398.2	+1	reviewed	p.V450A	0.999	265	0%	89	30.3%	3	0%	benign(0.41)	tolerated(0.27)	neutral(0.166)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX10	1662	genome.wustl.edu	37	11	108593986	108593986	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004398.2	+1	reviewed	p.D588N	0.001	311	0%	112	33.9%	2	0%	benign(0.005)	tolerated(0.19)	neutral(0.050)	NULL
DDX10	1662	genome.wustl.edu	37	11	108594076	108594076	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004398.2	+1	reviewed	p.E618*	0.000	227	0%	72	41.7%	17	17.6%	-	-	-	NULL
C11orf87	399947	genome.wustl.edu	37	11	109294443	109294443	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207645.3	+1	validated	p.S28	0.979	22	0%	37	32.4%	0	-	-	-	-	NULL
RDX	5962	genome.wustl.edu	37	11	110126048	110126048	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002906.3	-1	reviewed	p.K254T	1.000	287	0%	82	39%	17	58.8%	possibly_damaging(0.752)	deleterious(0)	deleterious(0.721)	HMMPfam_FERM_C,superfamily_PH domain-like
ARHGAP20	57569	genome.wustl.edu	37	11	110450654	110450654	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020809.2	-1	validated	p.S1006T	0.001	68	0%	34	14.7%	0	-	benign(0)	tolerated(0.92)	-	NULL
ARHGAP20	57569	genome.wustl.edu	37	11	110451630	110451630	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020809.2	-1	validated	p.M680I	0.000	88	0%	49	38.8%	0	-	benign(0.012)	tolerated(0.32)	neutral(0.025)	NULL
BTG4	54766	genome.wustl.edu	37	11	111368829	111368829	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017589.2	-1	reviewed	p.D69Y	1.000	616	0%	227	41.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_BTG,HMMSmart_btg1
C11orf88	399949	genome.wustl.edu	37	11	111385538	111385538	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207430.2	+1	validated	p.S10N	0.000	16	0%	13	38.5%	0	-	possibly_damaging(0.912)	tolerated(0.21)	neutral(0.407)	NULL
SIK2	23235	genome.wustl.edu	37	11	111571627	111571627	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015191.1	+1	validated	p.F166V	1.000	188	0%	74	43.2%	13	46.1%	probably_damaging(0.999)	tolerated(0.11)	deleterious(0.762)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SIK2	23235	genome.wustl.edu	37	11	111594233	111594233	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015191.1	+1	validated	p.R721*	1.000	25	0%	21	42.9%	15	60%	-	-	-	superfamily_Protein kinase-like (PK-like)
ALG9	79796	genome.wustl.edu	37	11	111739391	111739391	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024740.2	-1	reviewed	p.S113	0.915	103	0%	54	42.6%	12	41.6%	-	-	-	HMMPfam_Glyco_transf_22
FDXACB1	91893	genome.wustl.edu	37	11	111745932	111745932	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138378.1	-1	validated	p.S530Y	0.998	137	0%	81	38.3%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FDX-ACB,superfamily_Anticodon-binding domain of PheRS
DIXDC1	85458	genome.wustl.edu	37	11	111857640	111857640	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000440460	+1	known	p.D351N	1.000	298	0%	169	45.6%	2	50%	benign(0.313)	tolerated(0.13)	neutral(0.350)	NULL
PIH1D2	120379	genome.wustl.edu	37	11	111941876	111941876	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138789.3	-1	validated	p.S145A	0.999	422	0%	202	9.9%	2	0%	benign(0.208)	tolerated(0.28)	neutral(0.052)	HMMPfam_PIH1
C11orf57	55216	genome.wustl.edu	37	11	111953435	111953435	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001082969.1	+1	validated	p.K207N	1.000	192	0%	100	38%	14	57.1%	possibly_damaging(0.564)	deleterious(0)	deleterious(0.637)	NULL
BCO2	83875	genome.wustl.edu	37	11	112050080	112050080	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031938.4	+1	validated	p.P56	0.018	83	0%	53	45.3%	0	-	-	-	-	HMMPfam_RPE65
BCO2	83875	genome.wustl.edu	37	11	112085668	112085668	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031938.4	+1	validated	e10+1	1.000	287	0.3%	169	40.8%	0	-	-	-	-	-
LOC100288346	100288346	genome.wustl.edu	37	11	113144469	113144469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343129.1	-1	model	p.S19L	1.000	8	0.000	6	0.833	0	-	-	-	-	NULL
TTC12	54970	genome.wustl.edu	37	11	113235729	113235729	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017868.3	+1	validated	p.A663	0.000	21	0%	17	29.4%	8	50%	-	-	-	superfamily_ARM-type_fold
ANKK1	255239	genome.wustl.edu	37	11	113264204	113264204	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178510.1	+1	reviewed	p.S63P	0.892	80	0%	73	43.8%	0	-	possibly_damaging(0.873)	tolerated(0.12)	deleterious(0.600)	superfamily_Kinase_like,HMMPfam_Pkinase
ANKK1	255239	genome.wustl.edu	37	11	113264424	113264424	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178510.1	+1	reviewed	p.S136I	1.000	45	0%	46	47.8%	0	-	possibly_damaging(0.934)	tolerated(0.07)	deleterious(0.699)	superfamily_Kinase_like,HMMPfam_Pkinase
DRD2	1813	genome.wustl.edu	37	11	113295273	113295273	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000795.3	-1	reviewed	p.Y34C	1.000	38	0%	45	13.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Family A G protein-coupled receptor-like
TMPRSS5	80975	genome.wustl.edu	37	11	113560612	113560612	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030770.2	-1	reviewed	p.P412S	0.834	11	0%	16	56.2%	0	-	possibly_damaging(0.821)	tolerated(0.3)	neutral(0.339)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
NNMT	4837	genome.wustl.edu	37	11	114168761	114168761	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006169.2	+1	reviewed	p.I81	0.004	111	0%	47	57.4%	20	0%	-	-	-	HMMPfam_NNMT_PNMT_TEMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
NNMT	4837	genome.wustl.edu	37	11	114183101	114183101	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006169.2	+1	reviewed	p.E233K	0.000	53	0%	37	32.4%	33	6%	benign(0.001)	tolerated(0.11)	neutral(0.272)	HMMPfam_NNMT_PNMT_TEMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
FAM55A	120400	genome.wustl.edu	37	11	114392969	114392969	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152315.2	-1	validated	p.I313	0.000	270	0.4%	105	46.7%	0	-	-	-	-	NULL
FAM55D	54827	genome.wustl.edu	37	11	114442171	114442171	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077639.1	-1	validated	p.E375A	0.108	151	0%	60	55%	0	-	benign(0.036)	tolerated(1)	neutral(0.002)	NULL
FAM55B	120406	genome.wustl.edu	37	11	114577492	114577492	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182495.5	+1	validated	p.G507V	0.571	149	0%	53	32.1%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
BUD13	84811	genome.wustl.edu	37	11	116633427	116633427	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032725.3	-1	validated	p.R293I	0.997	187	0%	73	12.3%	10	10%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
ZNF259	8882	genome.wustl.edu	37	11	116654257	116654257	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003904.3	-1	provisional	p.D324Y	1.000	187	0%	117	38.5%	29	48.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-ZPR1,HMMSmart_Zpr1
SIK3	23387	genome.wustl.edu	37	11	116717160	116717160	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025164.3	-1	validated	p.S1248	1.000	102	0%	62	16.1%	15	13.3%	-	-	-	NULL
SIK3	23387	genome.wustl.edu	37	11	116746647	116746647	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025164.3	-1	validated	p.L334M	1.000	87	0%	55	45.5%	4	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_Protein kinase-like (PK-like)
SIDT2	51092	genome.wustl.edu	37	11	117064670	117064670	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040455.1	+1	validated	p.S771R	1.000	48	0%	37	48.6%	26	57.6%	possibly_damaging(0.623)	deleterious(0.03)	deleterious(0.582)	NULL
TAGLN	6876	genome.wustl.edu	37	11	117074045	117074045	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001522.1	+1	reviewed	p.S68I	1.000	35	0%	44	15.9%	141	24.1%	probably_damaging(0.997)	tolerated(0.08)	deleterious(0.766)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
CEP164	22897	genome.wustl.edu	37	11	117265758	117265758	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000375253	+1	known	p.*842	0.000	46	0%	31	29%	0	-	-	-	-	NULL
CEP164	22897	genome.wustl.edu	37	11	117267283	117267283	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014956.4	+1	validated	p.V1078	0.000	146	0%	111	39.6%	23	47.8%	-	-	-	NULL
DSCAML1	57453	genome.wustl.edu	37	11	117301450	117301450	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020693.2	-1	provisional	p.R1952W	1.000	26	0%	22	40.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DSCAML1	57453	genome.wustl.edu	37	11	117303951	117303951	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020693.2	-1	provisional	p.D1703	1.000	169	0%	144	44.4%	1	0%	-	-	-	NULL
SCN4B	6330	genome.wustl.edu	37	11	118007718	118007718	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024527.1	-1	reviewed	NULL	0.010	58	0%	32	21.9%	1	100%	-	-	-	-
SCN4B	6330	genome.wustl.edu	37	11	118007778	118007778	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174934.3	-1	reviewed	p.G217	1.000	74	0%	47	51.1%	0	-	-	-	-	NULL
UBE4A	9354	genome.wustl.edu	37	11	118267111	118267111	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004788.2	+1	reviewed	p.R1060W	1.000	141	0%	70	38.6%	21	47.6%	probably_damaging(0.986)	deleterious(0.01)	deleterious(0.840)	HMMPfam_U-box,HMMSmart_SM00504
MLL	4297	genome.wustl.edu	37	11	118363798	118363798	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005933.2	+1	validated	p.P1674	0.020	105	0%	67	41.8%	8	25%	-	-	-	HMMSmart_SM00297
MLL	4297	genome.wustl.edu	37	11	118374970	118374970	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005933.2	+1	validated	p.S2785Y	0.996	97	0%	56	42.9%	15	66.6%	possibly_damaging(0.447)	-	-	NULL
MLL	4297	genome.wustl.edu	37	11	118392101	118392101	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005933.2	+1	validated	p.T3868N	1.000	120	0%	84	44%	22	59%	probably_damaging(0.991)	-	-	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
PHLDB1	23187	genome.wustl.edu	37	11	118521197	118521197	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144758.1	+1	validated	p.W1273C	1.000	79	0%	95	40%	20	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
DDX6	1656	genome.wustl.edu	37	11	118625546	118625546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004397.4	-1	reviewed	p.R443C	1.000	183	0%	92	40.2%	48	52%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	superfamily_SSF52540
CCDC84	338657	genome.wustl.edu	37	11	118882958	118882958	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198489.1	+1	provisional	p.G226	0.870	45	0%	37	62.2%	18	50%	-	-	-	NULL
VPS11	55823	genome.wustl.edu	37	11	118941055	118941055	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000300793	+1	known	p.R194H	1.000	95	0%	79	20.3%	13	0%	-	-	-	superfamily_WD40 repeat-like
HMBS	3145	genome.wustl.edu	37	11	118959939	118959939	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000190.3	+1	reviewed	p.S75R	1.000	252	0%	197	43.7%	25	28%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Porphobil_deam,superfamily_Periplasmic binding protein-like II
HMBS	3145	genome.wustl.edu	37	11	118963186	118963186	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000190.3	+1	reviewed	p.E242K	1.000	27	0%	23	43.5%	88	32.9%	possibly_damaging(0.455)	tolerated(0.07)	neutral(0.468)	superfamily_Porphobilinogen deaminase (hydroxymethylbilane synthase) C-terminal domain
C2CD2L	9854	genome.wustl.edu	37	11	118983440	118983440	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014807.3	+1	validated	p.L415M	1.000	32	0%	23	52.2%	32	37.5%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	NULL
NLRX1	79671	genome.wustl.edu	37	11	119045246	119045246	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024618.2	+1	reviewed	p.F312L	1.000	43	0%	35	37.1%	12	58.3%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_NACHT
MCAM	4162	genome.wustl.edu	37	11	119181830	119181830	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006500.2	-1	validated	p.P539S	0.963	131	0%	107	40.2%	29	6.8%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
MFRP	83552	genome.wustl.edu	37	11	119213352	119213352	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000360167	-1	known	p.P372L	0.002	18	0%	22	31.8%	0	-	unknown(0)	tolerated(0.1)	-	NULL
USP2	9099	genome.wustl.edu	37	11	119243959	119243959	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004205.4	-1	validated	p.R78C	1.000	22	0%	30	56.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PVRL1	5818	genome.wustl.edu	37	11	119548408	119548408	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002855.4	-1	reviewed	p.E197G	1.000	87	0%	69	43.5%	29	55.1%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin
TRIM29	23650	genome.wustl.edu	37	11	119998096	119998096	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012101.3	-1	reviewed	p.K361R	1.000	72	0%	41	56.1%	31	61.2%	unknown(0)	tolerated(0.09)	-	NULL
POU2F3	25833	genome.wustl.edu	37	11	120187972	120187972	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014352.2	+1	validated	p.R390	1.000	232	0%	134	41.8%	1	0%	-	-	-	NULL
ARHGEF12	23365	genome.wustl.edu	37	11	120317116	120317116	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015313.1	+1	reviewed	p.K450N	0.994	154	0%	54	44.4%	20	45%	probably_damaging(0.997)	tolerated(0.13)	deleterious(0.719)	HMMPfam_RGS-like,superfamily_Regulator of G-protein signaling RGS
ARHGEF12	23365	genome.wustl.edu	37	11	120327884	120327884	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015313.1	+1	reviewed	p.R705H	0.997	145	0%	74	39.2%	28	46.4%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
GRIK4	2900	genome.wustl.edu	37	11	120833254	120833254	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014619.2	+1	reviewed	p.I710	0.992	91	0%	45	53.3%	0	-	-	-	-	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850
TECTA	7007	genome.wustl.edu	37	11	120980143	120980143	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005422.2	+1	reviewed	p.A141V	1.000	136	0%	75	49.3%	0	-	possibly_damaging(0.837)	deleterious(0)	deleterious(0.764)	HMMSmart_SM00539
TECTA	7007	genome.wustl.edu	37	11	121028720	121028720	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005422.2	+1	reviewed	p.G1492	0.887	11	0%	17	47.1%	0	-	-	-	-	HMMPfam_VWD,HMMSmart_SM00216
TECTA	7007	genome.wustl.edu	37	11	121028906	121028906	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005422.2	+1	reviewed	p.I1554M	0.957	31	0%	11	63.6%	0	-	possibly_damaging(0.873)	deleterious(0.02)	deleterious(0.722)	HMMPfam_VWD,HMMSmart_SM00216
SORL1	6653	genome.wustl.edu	37	11	121340776	121340776	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003105.4	+1	reviewed	p.V116M	1.000	45	0%	29	44.8%	10	60%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase
SORL1	6653	genome.wustl.edu	37	11	121424753	121424753	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003105.4	+1	reviewed	p.A792T	1.000	53	0%	31	32.3%	18	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMSmart_SM00135,superfamily_YWTD domain
SORL1	6653	genome.wustl.edu	37	11	121425922	121425922	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003105.4	+1	reviewed	p.G822	0.998	197	0%	91	38.5%	4	50%	-	-	-	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain
UBASH3B	84959	genome.wustl.edu	37	11	122678800	122678800	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032873.4	+1	validated	p.H576	0.490	140	0%	79	53.2%	1	0%	-	-	-	HMMPfam_PGAM,superfamily_SSF53254
UBASH3B	84959	genome.wustl.edu	37	11	122680509	122680509	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032873.4	+1	validated	p.W622*	1.000	196	0.5%	82	46.3%	0	-	-	-	-	superfamily_SSF53254
CRTAM	56253	genome.wustl.edu	37	11	122722400	122722400	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019604.2	+1	validated	e3-1	1.000	185	0%	96	42.7%	0	-	-	-	-	-
C11orf63	79864	genome.wustl.edu	37	11	122756575	122756575	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024806.2	+1	validated	p.L6	0.023	114	0%	69	37.7%	3	66.6%	-	-	-	NULL
C11orf63	79864	genome.wustl.edu	37	11	122756745	122756745	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024806.2	+1	validated	p.R63Q	0.000	108	0%	77	33.8%	4	100%	benign(0.033)	tolerated(1)	neutral(0.002)	NULL
C11orf63	79864	genome.wustl.edu	37	11	122774795	122774795	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024806.2	+1	validated	p.T169	0.000	45	0%	18	33.3%	1	0%	-	-	-	NULL
HSPA8	3312	genome.wustl.edu	37	11	122929478	122929478	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006597.3	-1	reviewed	p.T462A	1.000	92	0%	56	50%	1071	48.4%	benign(0.004)	deleterious(0.04)	neutral(0.349)	HMMPfam_HSP70,superfamily_Heat shock protein 70kD (HSP70) peptide-binding domain
GRAMD1B	57476	genome.wustl.edu	37	11	123448179	123448179	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020716.1	+1	validated	p.E43G	1.000	10	0.000	9	0.444	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
GRAMD1B	57476	genome.wustl.edu	37	11	123484331	123484331	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020716.1	+1	validated	p.D588G	1.000	34	0%	21	33.3%	1	0%	possibly_damaging(0.925)	tolerated(0.3)	neutral(0.402)	NULL
ZNF202	7753	genome.wustl.edu	37	11	123597087	123597087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003455.2	-1	validated	p.S522Y	0.999	176	0%	97	48.5%	5	40%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
OR10S1	219873	genome.wustl.edu	37	11	123847972	123847972	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004474.1	-1	provisional	p.P143T	1.000	28	0%	29	41.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR10G4	390264	genome.wustl.edu	37	11	123886942	123886942	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004462.1	+1	provisional	p.V221I	0.003	205	0%	120	48.3%	0	-	benign(0.002)	tolerated(0.42)	neutral(0.014)	HMMPfam_7tm_1,superfamily_SSF81321
OR10G4	390264	genome.wustl.edu	37	11	123887052	123887052	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004462.1	+1	provisional	p.I257M	0.257	122	0%	79	48.1%	0	-	benign(0.089)	tolerated(0.11)	neutral(0.278)	HMMPfam_7tm_1,superfamily_SSF81321
OR8B8	26493	genome.wustl.edu	37	11	124310410	124310410	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012378.1	-1	provisional	p.S191N	0.199	97	0%	77	51.9%	0	-	benign(0.016)	tolerated(0.21)	neutral(0.044)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR8B8	26493	genome.wustl.edu	37	11	124310533	124310533	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012378.1	-1	provisional	p.G150E	0.524	108	0%	95	36.8%	0	-	possibly_damaging(0.639)	deleterious(0.02)	deleterious(0.607)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
MSANTD2	79684	genome.wustl.edu	37	11	124637716	124637716	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024631.2	-1	validated	p.R294W	1.000	125	0%	70	44.3%	8	62.5%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
ROBO3	64221	genome.wustl.edu	37	11	124743285	124743285	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022370.3	+1	reviewed	p.R539Q	0.075	142	0%	91	31.9%	0	-	benign(0.003)	tolerated(1)	-	HMMSmart_SM00409,superfamily_Immunoglobulin
ROBO3	64221	genome.wustl.edu	37	11	124743717	124743717	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022370.3	+1	reviewed	p.Q581H	0.376	56	0%	38	52.6%	0	-	probably_damaging(0.958)	tolerated(0.08)	deleterious(0.702)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
ROBO3	64221	genome.wustl.edu	37	11	124747173	124747173	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022370.3	+1	reviewed	p.P938	0.988	150	0%	149	48.3%	3	0%	-	-	-	NULL
ROBO4	54538	genome.wustl.edu	37	11	124757059	124757059	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019055.5	-1	validated	p.P750L	0.873	18	0%	13	53.8%	4	0%	unknown(0)	deleterious(0.01)	-	NULL
HEPACAM	220296	genome.wustl.edu	37	11	124792564	124792564	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000374961	-1	known	p.G318	0.009	149	0%	150	42.7%	0	-	-	-	-	NULL
HEPACAM	220296	genome.wustl.edu	37	11	124805856	124805856	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152722.4	-1	validated	p.R16H	0.001	48	0%	42	42.9%	0	-	possibly_damaging(0.812)	deleterious(0)	deleterious(0.750)	NULL
SLC37A2	219855	genome.wustl.edu	37	11	124949582	124949582	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198277.2	+1	validated	p.V151	1.000	55	0%	56	10.7%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
PKNOX2	63876	genome.wustl.edu	37	11	125298943	125298943	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022062.2	+1	validated	p.I324	0.333	42	0%	41	51.2%	0	-	-	-	-	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like
FEZ1	9638	genome.wustl.edu	37	11	125330511	125330511	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005103.3	-1	reviewed	p.E184*	1.000	242	0%	131	47.3%	0	-	-	-	-	HMMPfam_FEZ
FEZ1	9638	genome.wustl.edu	37	11	125359428	125359428	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005103.3	-1	reviewed	p.E82D	1.000	162	0%	76	51.3%	3	0%	possibly_damaging(0.882)	tolerated(0.3)	neutral(0.373)	HMMPfam_FEZ
STT3A	3703	genome.wustl.edu	37	11	125478126	125478126	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152713.3	+1	validated	p.S301	0.979	116	0%	90	44.4%	124	41.9%	-	-	-	HMMPfam_STT3
STT3A	3703	genome.wustl.edu	37	11	125479469	125479469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152713.3	+1	validated	p.V368I	1.000	196	0.5%	144	46.5%	157	42%	benign(0.064)	tolerated(0.85)	neutral(0.005)	HMMPfam_STT3
STT3A	3703	genome.wustl.edu	37	11	125482602	125482602	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152713.3	+1	validated	p.S442I	0.987	158	0%	78	47.4%	162	40.7%	benign(0.223)	tolerated(0.12)	neutral(0.283)	HMMPfam_STT3
STT3A	3703	genome.wustl.edu	37	11	125488282	125488282	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152713.3	+1	validated	p.L597I	1.000	116	0%	62	38.7%	263	44.8%	benign(0.123)	deleterious(0.01)	neutral(0.416)	HMMPfam_STT3
ACRV1	56	genome.wustl.edu	37	11	125542517	125542517	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001612.4	-1	reviewed	p.R257*	0.690	183	0%	89	46.1%	0	-	-	-	-	NULL
PUS3	83480	genome.wustl.edu	37	11	125763984	125763984	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031307.3	-1	validated	p.K381T	0.068	186	0%	104	54.8%	12	75%	benign(0.007)	deleterious(0.02)	neutral(0.383)	NULL
DDX25	29118	genome.wustl.edu	37	11	125776097	125776097	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013264.3	+1	reviewed	p.L102M	1.000	174	0%	96	49%	0	-	probably_damaging(0.997)	tolerated(0.17)	deleterious(0.525)	superfamily_P-loop containing nucleoside triphosphate hydrolases
CDON	50937	genome.wustl.edu	37	11	125853922	125853922	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016952.4	-1	validated	p.G947V	0.287	67	0%	50	44%	1	0%	benign(0.268)	deleterious(0.03)	neutral(0.393)	NULL
CDON	50937	genome.wustl.edu	37	11	125867196	125867196	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016952.4	-1	validated	p.V756	0.021	75	0%	42	42.9%	2	50%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
CDON	50937	genome.wustl.edu	37	11	125888308	125888308	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016952.4	-1	validated	p.K186M	0.980	334	0%	108	51.9%	3	66.6%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
FOXRED1	55572	genome.wustl.edu	37	11	126143287	126143287	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017547.2	+1	provisional	p.G158	0.759	32	0%	28	50%	22	31.8%	-	-	-	HMMPfam_DAO,superfamily_FAD/NAD(P)-binding domain
TIRAP	114609	genome.wustl.edu	37	11	126160801	126160801	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148910.2	+1	reviewed	p.S4	0.062	31	0%	37	45.9%	11	54.5%	-	-	-	NULL
ST3GAL4	6484	genome.wustl.edu	37	11	126277179	126277179	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006278.1	+1	provisional	p.L68R	1.000	52	0%	41	51.2%	20	40%	benign(0.048)	deleterious(0.05)	neutral(0.348)	HMMPfam_Glyco_transf_29
KIRREL3	84623	genome.wustl.edu	37	11	126295572	126295572	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032531.3	-1	reviewed	p.E618D	1.000	101	0%	56	50%	0	-	benign(0.046)	tolerated(0.84)	neutral(0.003)	NULL
ETS1	2113	genome.wustl.edu	37	11	128354788	128354788	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143820.1	-1	validated	p.Q264H	1.000	135	0%	62	32.3%	22	31.8%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
KCNJ5	3762	genome.wustl.edu	37	11	128781576	128781576	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000890.3	+1	reviewed	p.F136	0.975	92	0%	55	34.5%	2	0%	-	-	-	HMMPfam_IRK,superfamily_SSF81324
ARHGAP32	9743	genome.wustl.edu	37	11	128840859	128840859	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142685.1	-1	validated	p.P1403S	1.000	29	0%	22	27.3%	21	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ARHGAP32	9743	genome.wustl.edu	37	11	128844629	128844629	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142685.1	-1	validated	p.A807	0.091	116	0%	72	12.5%	11	36.3%	-	-	-	NULL
PRDM10	56980	genome.wustl.edu	37	11	129784674	129784674	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020228.2	-1	reviewed	p.Y926	0.961	91	0%	86	46.5%	6	83.3%	-	-	-	NULL
APLP2	334	genome.wustl.edu	37	11	129999052	129999052	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001642.2	+1	validated	p.R469Q	1.000	28	0%	28	42.9%	313	48.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_CAPPD an extracellular domain of amyloid beta A4 protein
ST14	6768	genome.wustl.edu	37	11	130078492	130078492	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021978.3	+1	reviewed	p.R728W	1.000	11	0%	17	41.2%	280	47.8%	benign(0.185)	tolerated(0.17)	neutral(0.076)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
ZBTB44	29068	genome.wustl.edu	37	11	130131416	130131416	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014155.4	-1	validated	p.S118I	1.000	115	0%	45	46.7%	24	58.3%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB
ADAMTS8	11095	genome.wustl.edu	37	11	130278754	130278754	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007037.4	-1	reviewed	p.V611A	1.000	43	0%	41	43.9%	16	68.7%	possibly_damaging(0.522)	deleterious(0)	deleterious(0.621)	NULL
SNX19	399979	genome.wustl.edu	37	11	130784839	130784839	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014758.2	-1	validated	p.G332	0.982	162	0%	107	39.3%	7	14.2%	-	-	-	NULL
SNX19	399979	genome.wustl.edu	37	11	130785132	130785132	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014758.2	-1	validated	p.R235C	0.766	22	0%	28	28.6%	11	63.6%	possibly_damaging(0.501)	tolerated(0.14)	neutral(0.417)	HMMPfam_PXA,HMMSmart_SM00313
SPATA19	219938	genome.wustl.edu	37	11	133711952	133711952	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174927.1	-1	provisional	p.P162	0.000	67	0%	53	41.5%	0	-	-	-	-	NULL
NCAPD3	23310	genome.wustl.edu	37	11	134055263	134055263	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015261.2	-1	validated	p.S735N	1.000	241	0%	112	36.6%	15	26.6%	benign(0.103)	tolerated(0.55)	neutral(0.015)	superfamily_ARM-type_fold
NCAPD3	23310	genome.wustl.edu	37	11	134080271	134080271	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015261.2	-1	validated	p.E154K	0.993	315	0%	176	51.1%	6	33.3%	possibly_damaging(0.926)	tolerated(0.23)	neutral(0.416)	NULL
THYN1	29087	genome.wustl.edu	37	11	134119736	134119736	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037305.1	-1	reviewed	p.A124T	0.809	139	0%	75	14.7%	99	16.1%	possibly_damaging(0.631)	tolerated(0.06)	deleterious(0.543)	HMMPfam_DUF55
THYN1	29087	genome.wustl.edu	37	11	134121049	134121049	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037305.1	-1	reviewed	p.R66H	0.997	148	1.4%	113	46%	101	45.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF55
ACAD8	27034	genome.wustl.edu	37	11	134131249	134131249	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014384.2	+1	reviewed	p.P308S	1.000	39	0%	44	36.4%	21	38%	unknown(0)	-	-	HMMPfam_Acyl-CoA_dh_1,superfamily_AcylCoADH_C_like
GLB1L2	89944	genome.wustl.edu	37	11	134244612	134244612	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138342.3	+1	validated	p.Q608H	1.000	44	0%	35	54.3%	9	0%	benign(0.394)	deleterious(0.01)	deleterious(0.532)	NULL
IQSEC3	440073	genome.wustl.edu	37	12	272777	272777	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015232.1	+1	validated	p.L598M	1.000	30	0%	24	37.5%	0	-	unknown(0)	tolerated(0.07)	-	HMMSmart_PH,superfamily_SSF50729
IQSEC3	440073	genome.wustl.edu	37	12	274962	274962	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015232.1	+1	validated	p.F656	1.000	37	0%	29	48.3%	2	0%	-	-	-	HMMSmart_PH,superfamily_SSF50729
SLC6A12	6539	genome.wustl.edu	37	12	309870	309870	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122847.1	-1	validated	p.A220T	0.999	29	0%	21	57.1%	0	-	possibly_damaging(0.728)	tolerated(0.09)	deleterious(0.561)	HMMPfam_SNF
SLC6A12	6539	genome.wustl.edu	37	12	311014	311014	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122847.1	-1	validated	p.E164D	0.023	104	0%	90	36.7%	0	-	benign(0.009)	tolerated(0.6)	neutral(0.005)	HMMPfam_SNF
SLC6A13	6540	genome.wustl.edu	37	12	369115	369115	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016615.2	-1	provisional	p.W35*	1.000	117	0%	46	52.2%	0	-	-	-	-	HMMPfam_SNF
KDM5A	5927	genome.wustl.edu	37	12	430248	430248	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042603.1	-1	reviewed	p.R818	1.000	167	0%	97	44.3%	16	50%	-	-	-	HMMPfam_PLU-1
NINJ2	4815	genome.wustl.edu	37	12	772662	772662	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016533.4	-1	validated	p.M1I	1.000	20	0%	21	33.3%	1	0%	unknown(0)	-	-	NULL
WNK1	65125	genome.wustl.edu	37	12	970506	970506	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018979.3	+1	reviewed	p.L650	0.995	100	0%	44	43.2%	25	44%	-	-	-	superfamily_Kinase_like
WNK1	65125	genome.wustl.edu	37	12	1009727	1009727	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018979.3	+1	reviewed	p.Q2178	0.999	69	0%	37	37.8%	58	37.9%	-	-	-	NULL
CACNA1C	775	genome.wustl.edu	37	12	2774033	2774033	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199460.2	+1	reviewed	p.C1473	1.000	27	0%	18	66.7%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
LOC100288472	100288472	genome.wustl.edu	37	12	2896149	2896149	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343142.1	-1	model	p.A125D	0.999	82	0%	25	36%	0	-	-	-	-	HMMPfam_Chromo_shadow,superfamily_Chromo domain-like,HMMSmart_SM00300
NRIP2	83714	genome.wustl.edu	37	12	2939982	2939982	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031474.2	-1	validated	p.P129	0.075	52	0%	49	42.9%	1	0%	-	-	-	NULL
TULP3	7289	genome.wustl.edu	37	12	3046831	3046831	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003324.4	+1	reviewed	p.K320R	1.000	150	0%	84	29.8%	11	27.2%	benign(0.115)	tolerated(0.43)	neutral(0.022)	HMMPfam_Tub,superfamily_Transcriptional factor tubby C-terminal domain
TEAD4	7004	genome.wustl.edu	37	12	3104002	3104002	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003213.2	+1	reviewed	p.A24T	1.000	13	0.000	9	0.444	10	40%	benign(0)	tolerated(0.56)	neutral(0.006)	HMMPfam_TEA
TEAD4	7004	genome.wustl.edu	37	12	3131038	3131038	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003213.2	+1	reviewed	p.G251D	1.000	39	0%	48	47.9%	27	66.6%	benign(0.196)	deleterious(0.03)	neutral(0.383)	HMMPfam_TEA
TSPAN9	10867	genome.wustl.edu	37	12	3389564	3389564	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006675.4	+1	reviewed	p.K116T	1.000	15	0%	23	34.8%	30	43.3%	benign(0.268)	tolerated(0.13)	neutral(0.281)	superfamily_Tetraspanin,HMMPfam_Tetraspannin
EFCAB4B	84766	genome.wustl.edu	37	12	3763420	3763420	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144958.1	-1	validated	p.S335I	0.769	32	0%	30	40%	1	100%	benign(0.002)	tolerated(0.22)	neutral(0.042)	NULL
ENSG00000118976	0	genome.wustl.edu	37	12	3949768	3949768	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000237841	+1	known	p.R434Q	0.165	304	0%	177	42.4%	0	-	-	-	-	NULL
C12orf5	57103	genome.wustl.edu	37	12	4459055	4459055	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020375.2	+1	reviewed	p.R88Q	1.000	276	0%	110	39.1%	8	25%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_PGAM,superfamily_SSF53254
FGF23	8074	genome.wustl.edu	37	12	4488621	4488621	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020638.2	-1	reviewed	p.Y43C	1.000	24	0%	12	66.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_FGF,superfamily_Cytok_IL1_like
RAD51AP1	10635	genome.wustl.edu	37	12	4652994	4652994	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130862.1	+1	validated	p.Q45*	0.816	254	0%	90	36.7%	6	33.3%	-	-	-	NULL
AKAP3	10566	genome.wustl.edu	37	12	4735665	4735665	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006422.2	-1	reviewed	p.E801	1.000	269	0%	106	47.2%	0	-	-	-	-	HMMPfam_AKAP_110,HMMSmart_SM00807
AKAP3	10566	genome.wustl.edu	37	12	4736928	4736928	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006422.2	-1	reviewed	p.K380	0.029	166	0%	73	46.6%	0	-	-	-	-	HMMPfam_AKAP_110,HMMSmart_SM00807
GALNT8	26290	genome.wustl.edu	37	12	4835715	4835715	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017417.1	+1	reviewed	p.A77T	0.032	54	0%	24	41.7%	0	-	benign(0.004)	deleterious(0.03)	neutral(0.364)	NULL
KCNA1	3736	genome.wustl.edu	37	12	5021063	5021063	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000217.2	+1	reviewed	p.S173	0.000	19	0%	21	57.1%	0	-	-	-	-	superfamily_SSF81324
KCNA1	3736	genome.wustl.edu	37	12	5021624	5021624	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000217.2	+1	reviewed	p.P360	0.998	46	0%	48	37.5%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_SSF81324
ANO2	57101	genome.wustl.edu	37	12	5687538	5687538	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020373.2	-1	validated	p.D794Y	1.000	60	0%	33	48.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF590
VWF	7450	genome.wustl.edu	37	12	6219705	6219705	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000552.3	-1	reviewed	p.E123K	0.996	67	0%	46	45.7%	17	0%	benign(0.017)	deleterious(0.01)	neutral(0.406)	HMMPfam_VWD,HMMSmart_SM00216
CD9	928	genome.wustl.edu	37	12	6345408	6345408	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001769.2	+1	reviewed	p.I196	0.640	35	0%	27	33.3%	395	38.2%	-	-	-	HMMPfam_Tetraspannin
LOC678655	678655	genome.wustl.edu	37	12	6559559	6559559	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_015382.1	-1	predicted	NULL	0.008	41	0%	24	45.8%	3	33.3%	-	-	-	-
TAPBPL	55080	genome.wustl.edu	37	12	6562456	6562456	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018009.4	+1	validated	p.E96D	1.000	6	0.000	9	0.667	6	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
NCAPD2	9918	genome.wustl.edu	37	12	6630996	6630996	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014865.3	+1	validated	p.R583W	0.029	109	0%	73	37%	28	50%	benign(0.081)	deleterious(0.04)	neutral(0.355)	superfamily_ARM repeat
IFFO1	25900	genome.wustl.edu	37	12	6659895	6659895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039670.1	-1	validated	p.A299D	0.999	31	0%	37	51.4%	2	0%	probably_damaging(0.997)	tolerated(0.57)	deleterious(0.472)	NULL
CHD4	1108	genome.wustl.edu	37	12	6682375	6682375	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001273.2	-1	reviewed	p.S1808P	1.000	95	0%	63	11.1%	117	0.8%	benign(0.152)	tolerated(0.06)	neutral(0.336)	HMMPfam_CHDCT2
CHD4	1108	genome.wustl.edu	37	12	6710106	6710106	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001273.2	-1	reviewed	p.R305C	1.000	235	0%	141	36.9%	25	32%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CHD4	1108	genome.wustl.edu	37	12	6711239	6711239	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001273.2	-1	reviewed	p.D109N	1.000	19	0%	15	46.7%	30	40%	possibly_damaging(0.507)	deleterious(0)	deleterious(0.614)	NULL
ING4	51147	genome.wustl.edu	37	12	6761831	6761831	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127582.1	-1	reviewed	p.R166H	1.000	81	0%	62	48.4%	29	44.8%	benign(0.001)	tolerated(0.15)	neutral(0.241)	NULL
ZNF384	171017	genome.wustl.edu	37	12	6788170	6788170	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135734.1	-1	reviewed	p.A82	0.005	35	0%	24	50%	34	50%	-	-	-	NULL
GPR162	27239	genome.wustl.edu	37	12	6933506	6933506	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019858.1	+1	reviewed	p.L148F	1.000	22	0%	21	71.4%	3	33.3%	probably_damaging(0.991)	tolerated(0.09)	deleterious(0.740)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LEPREL2	10536	genome.wustl.edu	37	12	6939084	6939084	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000290510	+1	known	p.H186R	1.000	24	0%	25	32%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LRRC23	10233	genome.wustl.edu	37	12	7021988	7021988	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135217.1	+1	validated	p.E285K	0.789	44	0%	25	44%	8	25%	possibly_damaging(0.611)	tolerated(0.24)	neutral(0.249)	superfamily_L domain-like
ENO2	2026	genome.wustl.edu	37	12	7028895	7028895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001975.2	+1	reviewed	p.A278V	0.927	74	0%	61	49.2%	65	29.2%	benign(0.001)	deleterious(0)	neutral(0.445)	HMMPfam_Enolase_C,superfamily_Enolase C-terminal domain-like
ATN1	1822	genome.wustl.edu	37	12	7046238	7046238	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007026.1	+1	reviewed	p.P603L	0.997	26	0%	38	47.4%	148	42.5%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Atrophin-1
EMG1	10436	genome.wustl.edu	37	12	7084291	7084291	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000261406	+1	known	p.G150D	1.000	447	0%	289	41.2%	30	56.6%	-	-	-	HMMPfam_EMG1
LPCAT3	10162	genome.wustl.edu	37	12	7087516	7087516	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005768.5	-1	validated	p.A343T	1.000	30	0%	31	38.7%	27	33.3%	benign(0.273)	tolerated(0.57)	neutral(0.035)	HMMPfam_MBOAT
C1S	716	genome.wustl.edu	37	12	7177895	7177895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001734.3	+1	reviewed	p.K669N	0.884	41	0%	18	33.3%	21	4.7%	benign(0.119)	tolerated(0.35)	neutral(0.030)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
C1R	715	genome.wustl.edu	37	12	7187965	7187965	+	Silent	SNP	C	C	T	rs147540938	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000290575	-1	known	p.P677	0.000	38	0%	34	50%	52	25%	-	-	-	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
C1R	715	genome.wustl.edu	37	12	7188604	7188604	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000290575	-1	known	p.V464	1.000	7	0.000	7	0.571	63	28.5%	benign(0)	tolerated(0.06)	neutral(0.323)	superfamily_Complement control module/SCR domain
C1R	715	genome.wustl.edu	37	12	7242272	7242272	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000290575	-1	known	p.C175Y	1.000	34	0%	36	41.7%	51	27.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
CLSTN3	9746	genome.wustl.edu	37	12	7288893	7288893	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014718.3	+1	validated	p.W278*	1.000	33	0%	33	45.5%	23	13%	-	-	-	NULL
CLSTN3	9746	genome.wustl.edu	37	12	7288971	7288971	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014718.3	+1	validated	p.A304	0.005	19	0%	25	48%	27	18.5%	-	-	-	superfamily_ConA_like_lec_gl
CLSTN3	9746	genome.wustl.edu	37	12	7302191	7302191	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014718.3	+1	validated	p.D716G	1.000	26	0%	32	50%	32	62.5%	probably_damaging(0.956)	tolerated(0.15)	deleterious(0.641)	NULL
CD163L1	283316	genome.wustl.edu	37	12	7548888	7548888	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174941.4	-1	reviewed	p.A618D	0.561	58	0%	36	44.4%	0	-	benign(0.254)	tolerated(0.62)	neutral(0.030)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
GDF3	9573	genome.wustl.edu	37	12	7842554	7842554	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020634.1	-1	reviewed	p.M339V	1.000	113	0%	55	41.8%	0	-	benign(0.347)	tolerated(0.32)	neutral(0.134)	HMMPfam_TGF_beta,HMMSmart_TGFB,superfamily_SSF57501
FOXJ2	55810	genome.wustl.edu	37	12	8197429	8197429	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018416.2	+1	validated	p.P231H	1.000	237	0%	121	9.9%	9	22.2%	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	NULL
FOXJ2	55810	genome.wustl.edu	37	12	8201361	8201361	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018416.2	+1	validated	p.N432D	1.000	258	0.4%	145	11.7%	11	36.3%	possibly_damaging(0.791)	tolerated(0.25)	neutral(0.333)	NULL
NECAP1	25977	genome.wustl.edu	37	12	8242583	8242583	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015509.3	+1	validated	p.I49	1.000	149	0%	104	45.2%	13	61.5%	-	-	-	HMMPfam_DUF1681
CLEC4A	50856	genome.wustl.edu	37	12	8290794	8290794	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016184.3	+1	reviewed	p.R209C	0.000	195	0%	110	84.5%	2	100%	probably_damaging(0.995)	tolerated(0.19)	deleterious(0.507)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1
ENSG00000246407	0	genome.wustl.edu	37	12	8384860	8384860	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000499592	-1	known	NULL	0.047	25	0%	21	23.8%	3	33.3%	-	-	-	-
ENSG00000246407	0	genome.wustl.edu	37	12	8385091	8385091	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000499592	-1	known	NULL	0.000	162	0%	151	28.5%	6	16.6%	-	-	-	-
AICDA	57379	genome.wustl.edu	37	12	8757814	8757814	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020661.2	-1	reviewed	p.K142E	1.000	7	0.000	9	0.444	0	-	probably_damaging(0.996)	tolerated(0.66)	neutral(0.464)	HMMPfam_APOBEC_C,superfamily_Cytidine deaminase-like
A2ML1	144568	genome.wustl.edu	37	12	8988877	8988877	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144670.3	+1	validated	p.V224M	1.000	492	0%	255	45.1%	4	75%	probably_damaging(0.992)	deleterious(0.03)	deleterious(0.812)	HMMPfam_A2M_N
PZP	5858	genome.wustl.edu	37	12	9311058	9311058	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002864.2	-1	validated	p.G1084	1.000	184	0%	139	48.2%	1	0%	-	-	-	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp
PZP	5858	genome.wustl.edu	37	12	9348974	9348974	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002864.2	-1	validated	p.F348	0.212	273	0%	140	47.1%	0	-	-	-	-	NULL
DDX11L8	100302090	genome.wustl.edu	37	12	9446422	9446422	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000341155	+1	known	p.G103	0.000	271	0%	192	25%	4	25%	-	-	-	HMMSmart_SM00488,superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX12P	440081	genome.wustl.edu	37	12	9572578	9572578	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000432996	-1	known	p.R792W	1.000	58	0%	54	50%	11	9%	-	-	-	HMMSmart_SM00491
KLRB1	3820	genome.wustl.edu	37	12	9747911	9747911	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002258.2	-1	reviewed	p.E213*	0.629	439	0%	92	40.2%	1	0%	-	-	-	NULL
CLEC1A	51267	genome.wustl.edu	37	12	10233977	10233977	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016511.2	-1	reviewed	p.D84N	0.394	392	0%	171	34.5%	0	-	benign(0.085)	tolerated(0.24)	neutral(0.043)	NULL
OLR1	4973	genome.wustl.edu	37	12	10319552	10319552	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002543.3	-1	reviewed	p.S61	0.962	318	0%	134	37.3%	1	0%	-	-	-	NULL
C12orf59	120939	genome.wustl.edu	37	12	10337942	10337942	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153022.2	+1	validated	p.D18Y	1.000	210	0%	112	36.6%	0	-	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	NULL
KLRC2	3822	genome.wustl.edu	37	12	10588443	10588443	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002260.3	-1	reviewed	p.P48H	0.028	854	0%	298	16.1%	0	-	benign(0.215)	deleterious(0)	neutral(0.466)	NULL
MAGOHB	55110	genome.wustl.edu	37	12	10760465	10760465	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018048.2	-1	provisional	p.V112A	1.000	475	0%	138	39.1%	29	37.9%	benign(0.09)	deleterious(0.05)	neutral(0.352)	HMMPfam_Mago_nashi,superfamily_Mago_nashi
STYK1	55359	genome.wustl.edu	37	12	10772916	10772916	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018423.2	-1	validated	p.R366C	1.000	32	3.1%	25	56%	2	50%	benign(0.298)	deleterious(0.05)	neutral(0.438)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
TAS2R8	50836	genome.wustl.edu	37	12	10959361	10959361	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023918.1	-1	reviewed	p.P73	0.000	293	0%	55	47.3%	0	-	-	-	-	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R10	50839	genome.wustl.edu	37	12	10978450	10978450	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023921.1	-1	reviewed	p.S140L	0.000	110	0%	27	40.7%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like
PRR4	11272	genome.wustl.edu	37	12	10999733	10999733	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098538.1	-1	validated	p.L125	0.000	133	0%	93	43%	7	14.2%	unknown(0)	-	-	NULL
TAS2R31	259290	genome.wustl.edu	37	12	11183404	11183404	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176885.2	-1	provisional	p.A177	0.000	356	0%	165	45.5%	1	100%	-	-	-	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like
PRB1	5542	genome.wustl.edu	37	12	11506838	11506838	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199353.2	-1	reviewed	p.K67Q	0.000	90	0%	68	32.4%	0	-	unknown(0)	tolerated(0.59)	-	NULL
PRB2	653247	genome.wustl.edu	37	12	11546218	11546218	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006248.3	-1	validated	p.G265V	0.975	122	0%	84	19%	0	-	unknown(0)	deleterious(0.02)	-	NULL
LRP6	4040	genome.wustl.edu	37	12	12397410	12397410	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002336.2	-1	reviewed	p.E79*	1.000	176	0%	100	12%	5	20%	-	-	-	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain
MANSC1	54682	genome.wustl.edu	37	12	12483020	12483020	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018050.2	-1	validated	p.R413C	0.995	85	0%	48	41.7%	45	51.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CREBL2	1389	genome.wustl.edu	37	12	12788725	12788725	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001310.2	+1	reviewed	p.K10N	1.000	87	0%	47	57.4%	9	66.6%	possibly_damaging(0.919)	deleterious(0.01)	deleterious(0.775)	NULL
GPR19	2842	genome.wustl.edu	37	12	12815306	12815306	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006143.2	-1	validated	p.R26H	0.878	99	0%	62	46.8%	0	-	benign(0)	tolerated(0.39)	neutral(0.016)	superfamily_Family A G protein-coupled receptor-like
GPRC5A	9052	genome.wustl.edu	37	12	13061706	13061706	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003979.3	+1	reviewed	p.E175*	0.451	145	0%	111	50.5%	62	12.9%	-	-	-	HMMPfam_7tm_3
KIAA1467	57613	genome.wustl.edu	37	12	13214606	13214606	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020853.1	+1	validated	p.T210	0.562	110	0%	52	44.2%	6	83.3%	-	-	-	NULL
GSG1	83445	genome.wustl.edu	37	12	13237901	13237901	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080555.1	-1	validated	p.F341L	0.000	116	0%	71	33.8%	0	-	benign(0.042)	tolerated(0.23)	neutral(0.044)	NULL
GSG1	83445	genome.wustl.edu	37	12	13238061	13238061	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080555.1	-1	validated	p.P288L	0.004	35	0%	21	52.4%	0	-	benign(0.002)	tolerated(1)	-	NULL
EMP1	2012	genome.wustl.edu	37	12	13367615	13367615	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001423.2	+1	validated	p.R155I	1.000	82	0%	42	54.8%	6	33.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
GRIN2B	2904	genome.wustl.edu	37	12	13722946	13722946	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000834.3	-1	reviewed	p.L726R	1.000	43	0%	31	48.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850
GRIN2B	2904	genome.wustl.edu	37	12	13764727	13764727	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000834.3	-1	reviewed	p.A571V	1.000	58	0%	38	47.4%	0	-	benign(0.006)	deleterious(0)	neutral(0.445)	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850
ATF7IP	55729	genome.wustl.edu	37	12	14577090	14577090	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018179.3	+1	validated	p.P81S	0.000	177	0%	69	21.7%	10	0%	unknown(0)	tolerated(0.9)	-	NULL
ATF7IP	55729	genome.wustl.edu	37	12	14577525	14577525	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018179.3	+1	validated	p.A226T	0.001	71	0%	58	53.4%	26	38.4%	unknown(0)	tolerated(0.42)	-	NULL
ATF7IP	55729	genome.wustl.edu	37	12	14591174	14591174	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018179.3	+1	validated	p.R634	0.998	249	0%	129	45.7%	22	40.9%	-	-	-	NULL
PLBD1	79887	genome.wustl.edu	37	12	14664633	14664633	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024829.5	-1	validated	p.S286F	1.000	48	0%	25	48%	13	23%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Phospholip_B
GUCY2C	2984	genome.wustl.edu	37	12	14822666	14822666	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004963.3	-1	validated	p.I424	0.004	301	0%	131	48.1%	0	-	-	-	-	superfamily_Periplasmic binding protein-like I
GUCY2C	2984	genome.wustl.edu	37	12	14836124	14836124	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004963.3	-1	validated	p.E155*	0.999	156	0%	57	47.4%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
ERP27	121506	genome.wustl.edu	37	12	15087906	15087906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152321.2	-1	validated	p.P73S	0.006	91	0%	46	37%	0	-	benign(0)	tolerated(0.64)	neutral(0.003)	superfamily_Thiordxn-like_fd
STRAP	11171	genome.wustl.edu	37	12	16050927	16050927	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007178.3	+1	validated	p.Y250	1.000	234	0%	75	41.3%	71	64.7%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
SLC15A5	729025	genome.wustl.edu	37	12	16392771	16392771	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000344941	-1	known	p.N336H	0.999	126	0%	74	45.9%	0	-	benign(0.198)	tolerated(0.74)	neutral(0.021)	HMMPfam_PTR2
PIK3C2G	5288	genome.wustl.edu	37	12	18552703	18552703	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004570.4	+1	reviewed	p.T705I	0.415	237	0%	126	42.1%	0	-	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	HMMPfam_PI3Ka,HMMSmart_SM00145,superfamily_ARM repeat
PIK3C2G	5288	genome.wustl.edu	37	12	18576958	18576958	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004570.4	+1	reviewed	p.A789V	1.000	102	0%	53	50.9%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_PI3Ka,HMMSmart_SM00145,superfamily_ARM repeat
PLEKHA5	54477	genome.wustl.edu	37	12	19427829	19427829	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019012.3	+1	validated	p.R403*	1.000	60	0%	30	46.7%	20	30%	-	-	-	NULL
PLEKHA5	54477	genome.wustl.edu	37	12	19511298	19511298	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019012.3	+1	validated	p.V926G	0.006	128	0%	60	48.3%	14	14.2%	possibly_damaging(0.811)	deleterious(0)	deleterious(0.750)	NULL
PDE3A	5139	genome.wustl.edu	37	12	20766517	20766517	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000921.3	+1	validated	p.Q384	1.000	64	0%	24	54.2%	18	33.3%	-	-	-	NULL
PDE3A	5139	genome.wustl.edu	37	12	20803475	20803475	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000921.3	+1	validated	p.K956E	1.000	355	0%	130	18.5%	17	5.8%	possibly_damaging(0.917)	deleterious(0.02)	deleterious(0.751)	HMMPfam_PDEase_I,HMMSmart_HDc,superfamily_SSF109604
SLCO1B3	28234	genome.wustl.edu	37	12	21011428	21011428	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019844.2	+1	validated	p.P94	0.870	860	0%	406	85.7%	0	-	-	-	-	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
SLCO1A2	6579	genome.wustl.edu	37	12	21453289	21453289	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021094.3	-1	reviewed	p.I301	1.000	633	0%	161	20.5%	0	-	-	-	-	HMMPfam_OATP,superfamily_MFS general substrate transporter
IAPP	3375	genome.wustl.edu	37	12	21531220	21531220	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000415.2	+1	reviewed	p.R44C	0.592	154	0%	73	45.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Calc_CGRP_IAPP,HMMSmart_CALCITONIN,PatternScan_CALCITONIN
PYROXD1	79912	genome.wustl.edu	37	12	21608085	21608085	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024854.3	+1	validated	p.E170*	1.000	334	0%	100	48%	2	0%	-	-	-	HMMPfam_Pyr_redox_2,superfamily_SSF51905
GYS2	2998	genome.wustl.edu	37	12	21716178	21716178	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021957.3	-1	reviewed	p.R309*	1.000	206	0%	80	45%	0	-	-	-	-	HMMPfam_Glycogen_syn,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
ABCC9	10060	genome.wustl.edu	37	12	22063212	22063212	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005691.2	-1	reviewed	p.T400M	1.000	103	0%	50	38%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC9	10060	genome.wustl.edu	37	12	22063780	22063780	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005691.2	-1	reviewed	p.N382D	1.000	144	0%	34	47.1%	2	100%	possibly_damaging(0.895)	deleterious(0)	deleterious(0.797)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC9	10060	genome.wustl.edu	37	12	22078907	22078907	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005691.2	-1	reviewed	p.I125	0.993	157	0%	63	33.3%	2	100%	-	-	-	NULL
KIAA0528	9847	genome.wustl.edu	37	12	22671016	22671016	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014802.1	-1	predicted	p.P286T	1.000	445	0%	172	13.4%	9	44.4%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
KIAA0528	9847	genome.wustl.edu	37	12	22676470	22676470	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014802.1	-1	predicted	p.G230	1.000	119	0%	52	36.5%	10	20%	-	-	-	NULL
ETNK1	55500	genome.wustl.edu	37	12	22837848	22837848	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018638.4	+1	reviewed	p.K440T	1.000	635	0%	195	46.7%	23	73.9%	benign(0.205)	tolerated(0.28)	neutral(0.052)	superfamily_Kinase_like
SOX5	6660	genome.wustl.edu	37	12	23893906	23893906	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006940.4	-1	reviewed	p.L212	0.967	66	0%	23	43.5%	0	-	-	-	-	NULL
CASC1	55259	genome.wustl.edu	37	12	25263127	25263127	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018272.3	-1	validated	p.S609	0.989	269	0%	104	51%	0	-	-	-	-	NULL
CASC1	55259	genome.wustl.edu	37	12	25272135	25272135	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018272.3	-1	validated	p.V447A	0.042	302	0%	143	42%	0	-	possibly_damaging(0.706)	deleterious(0.02)	deleterious(0.637)	NULL
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T	rs121913529	byCluster	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033360.2	-1	reviewed	p.G12D	1.000	174	0%	118	44.9%	8	25%	possibly_damaging(0.886)	deleterious(0)	deleterious(0.791)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
IFLTD1	160492	genome.wustl.edu	37	12	25702394	25702394	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145728.1	-1	validated	p.S59Y	0.000	173	0%	50	44%	0	-	possibly_damaging(0.68)	deleterious(0.03)	deleterious(0.607)	NULL
ITPR2	3709	genome.wustl.edu	37	12	26596537	26596537	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002223.2	-1	validated	p.S2130L	0.350	338	0%	151	49%	5	60%	benign(0)	tolerated(0.13)	neutral(0.253)	NULL
ITPR2	3709	genome.wustl.edu	37	12	26634109	26634109	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002223.2	-1	validated	p.I2026	0.947	182	0%	108	36.1%	5	60%	-	-	-	HMMPfam_RIH_assoc
ITPR2	3709	genome.wustl.edu	37	12	26784846	26784846	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002223.2	-1	validated	p.D963Y	1.000	54	0%	36	47.2%	6	50%	benign(0.265)	tolerated(0.25)	neutral(0.065)	NULL
ITPR2	3709	genome.wustl.edu	37	12	26875423	26875423	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002223.2	-1	validated	p.K144	1.000	374	0%	105	42.9%	2	100%	-	-	-	superfamily_MIR domain (Pfam 02815),HMMPfam_Ins145_P3_rec,HMMSmart_SM00472
ASUN	55726	genome.wustl.edu	37	12	27069074	27069074	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018164.2	-1	validated	p.S370F	1.000	156	0%	82	31.7%	34	44.1%	possibly_damaging(0.563)	deleterious(0.02)	deleterious(0.576)	HMMPfam_DUF2151
FGFR1OP2	26127	genome.wustl.edu	37	12	27109485	27109485	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015633.2	+1	validated	p.E49*	1.000	74	0%	24	29.2%	22	40.9%	-	-	-	HMMPfam_DUF837
TM7SF3	51768	genome.wustl.edu	37	12	27128495	27128495	+	Missense_Mutation	SNP	C	C	T	rs182596234	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016551.2	-1	validated	p.V462I	0.364	228	0%	73	50.7%	105	49.5%	benign(0.005)	tolerated(0.41)	neutral(0.015)	NULL
STK38L	23012	genome.wustl.edu	37	12	27450772	27450772	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015000.3	+1	validated	p.E40G	1.000	272	0%	112	42%	26	50%	benign(0.002)	tolerated(0.35)	neutral(0.021)	NULL
STK38L	23012	genome.wustl.edu	37	12	27470900	27470900	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015000.3	+1	validated	p.V343I	1.000	247	0%	93	26.9%	21	47.6%	benign(0)	tolerated(0.41)	neutral(0.015)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
ARNTL2	56938	genome.wustl.edu	37	12	27553572	27553572	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020183.3	+1	provisional	p.N342S	0.066	195	0%	88	43.2%	4	75%	benign(0.003)	deleterious(0.02)	neutral(0.383)	NULL
ARNTL2	56938	genome.wustl.edu	37	12	27568831	27568831	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020183.3	+1	provisional	p.S539L	0.989	303	0%	81	49.4%	6	0%	benign(0.001)	tolerated(0.81)	neutral(0.001)	NULL
C12orf70	341346	genome.wustl.edu	37	12	27623569	27623569	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145010.1	+1	validated	p.A2D	0.009	105	0%	44	13.6%	0	-	possibly_damaging(0.768)	deleterious(0)	deleterious(0.730)	NULL
MRPS35	60488	genome.wustl.edu	37	12	27877088	27877088	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021821.2	+1	reviewed	p.R164Q	1.000	172	0%	61	41%	62	48.3%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_MRP-S28
MRPS35	60488	genome.wustl.edu	37	12	27908320	27908320	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021821.2	+1	reviewed	p.E303D	0.970	116	0%	66	34.8%	23	39.1%	benign(0.032)	tolerated(0.08)	neutral(0.301)	NULL
FAR2	55711	genome.wustl.edu	37	12	29464035	29464035	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018099.3	+1	provisional	p.V281	0.778	270	0%	113	38.9%	12	50%	-	-	-	HMMPfam_NAD_binding_4,superfamily_NAD(P)-bd
ERGIC2	51290	genome.wustl.edu	37	12	29494750	29494750	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016570.2	-1	validated	e12-1	1.000	223	0%	60	38.3%	0	-	-	-	-	-
ERGIC2	51290	genome.wustl.edu	37	12	29524560	29524560	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016570.2	-1	validated	p.R3*	1.000	231	0%	54	40.7%	17	17.6%	-	-	-	NULL
OVCH1	341350	genome.wustl.edu	37	12	29596324	29596324	+	Missense_Mutation	SNP	C	C	T	rs190712690	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183378.2	-1	validated	p.E1043K	0.341	385	0%	108	43.5%	0	-	possibly_damaging(0.806)	tolerated(0.54)	neutral(0.311)	superfamily_Spermadhesin CUB domain
OVCH1	341350	genome.wustl.edu	37	12	29639220	29639220	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183378.2	-1	validated	p.S318R	0.004	280	0%	110	44.5%	0	-	benign(0.337)	tolerated(0.36)	neutral(0.126)	NULL
TMTC1	83857	genome.wustl.edu	37	12	29709864	29709864	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175861.2	-1	provisional	p.K426N	1.000	216	0%	102	39.2%	14	42.8%	benign(0.286)	tolerated(0.06)	neutral(0.410)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_Protein prenylyltransferase
TMTC1	83857	genome.wustl.edu	37	12	29786226	29786226	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175861.2	-1	provisional	p.L220M	1.000	39	0%	30	26.7%	14	35.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_DUF1736
TMTC1	83857	genome.wustl.edu	37	12	29920880	29920880	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175861.2	-1	provisional	p.A36D	0.996	163	0.6%	49	32.7%	20	35%	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	NULL
IPO8	10526	genome.wustl.edu	37	12	30783829	30783829	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006390.2	-1	reviewed	p.A1027T	0.058	326	0%	137	33.6%	7	71.4%	benign(0)	tolerated(0.2)	neutral(0.049)	NULL
IPO8	10526	genome.wustl.edu	37	12	30784869	30784869	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006390.2	-1	reviewed	p.Q992H	1.000	26	0%	12	33.3%	24	12.5%	benign(0.354)	tolerated(0.06)	neutral(0.434)	NULL
IPO8	10526	genome.wustl.edu	37	12	30819109	30819109	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006390.2	-1	reviewed	p.E407D	1.000	136	0%	64	34.4%	5	0%	benign(0.01)	tolerated(0.68)	neutral(0.003)	superfamily_ARM-type_fold
IPO8	10526	genome.wustl.edu	37	12	30829487	30829487	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006390.2	-1	reviewed	p.T225I	0.677	228	0%	118	44.1%	11	81.8%	benign(0.008)	tolerated(0.47)	neutral(0.011)	superfamily_ARM-type_fold
CAPRIN2	65981	genome.wustl.edu	37	12	30888067	30888067	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002259.1	-1	validated	p.R215Q	0.887	313	0.3%	197	87.3%	4	100%	possibly_damaging(0.781)	deleterious(0.04)	deleterious(0.641)	NULL
DDX11	1663	genome.wustl.edu	37	12	31247541	31247541	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152438.1	+1	reviewed	p.P463S	0.989	523	0%	372	27.4%	12	50%	benign(0.015)	tolerated(0.19)	neutral(0.050)	NULL
OVOS2	144203	genome.wustl.edu	37	12	31279365	31279365	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343151.1	-1	model	p.L1130I	0.764	353	0%	177	49.2%	0	-	-	-	-	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp
OVOS2	144203	genome.wustl.edu	37	12	31302358	31302358	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343151.1	-1	model	p.C312Y	1.000	258	0.4%	94	35.1%	0	-	-	-	-	NULL
DENND5B	160518	genome.wustl.edu	37	12	31632774	31632774	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144973.3	-1	validated	p.Q218R	0.997	325	0%	155	45.8%	7	14.2%	benign(0.007)	tolerated(0.64)	neutral(0.003)	HMMPfam_DENN,HMMSmart_SM00799
METTL20	254013	genome.wustl.edu	37	12	31819145	31819145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135863.1	+1	validated	p.D147Y	1.000	273	0%	152	40.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Methyltransf_16,superfamily_SSF53335
H3F3C	440093	genome.wustl.edu	37	12	31944799	31944799	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013699.2	-1	validated	p.V101A	1.000	93	1.1%	73	19.2%	1	0%	probably_damaging(0.994)	-	-	HMMSmart_H3,HMMPfam_Histone,superfamily_Histone-fold
C12orf35	55196	genome.wustl.edu	37	12	32135426	32135426	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018169.3	+1	validated	p.R513W	0.000	77	0%	52	51.9%	17	52.9%	possibly_damaging(0.864)	deleterious(0.02)	deleterious(0.718)	NULL
C12orf35	55196	genome.wustl.edu	37	12	32138431	32138431	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018169.3	+1	validated	p.S1514	0.016	90	0%	53	54.7%	33	33.3%	-	-	-	NULL
ENSG00000253063	0	genome.wustl.edu	37	12	32630374	32630374	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000517254	-1	novel	NULL	0.003	641	0%	213	43.2%	0	-	-	-	-	-
DNM1L	10059	genome.wustl.edu	37	12	32861112	32861112	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012062.3	+1	reviewed	p.R108Q	1.000	215	0%	73	16.4%	6	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Dynamin_N,HMMSmart_SM00053,superfamily_P-loop containing nucleoside triphosphate hydrolases
PKP2	5318	genome.wustl.edu	37	12	32949048	32949048	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004572.3	-1	reviewed	p.G828	0.008	101	0%	76	47.4%	10	20%	-	-	-	HMMSmart_SM00185,superfamily_ARM repeat
ENSG00000245482	0	genome.wustl.edu	37	12	34176848	34176848	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000501954	-1	known	NULL	0.036	239	0%	106	45.3%	0	-	-	-	-	-
KIF21A	55605	genome.wustl.edu	37	12	39735910	39735910	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017641.3	-1	validated	p.D564N	1.000	829	0%	237	46.8%	1	0%	benign(0)	tolerated(1)	-	NULL
KIF21A	55605	genome.wustl.edu	37	12	39751149	39751149	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017641.3	-1	validated	p.R436C	1.000	226	0%	93	43%	14	35.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ABCD2	225	genome.wustl.edu	37	12	39979985	39979985	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005164.3	-1	reviewed	p.V587	0.991	282	0%	111	45%	2	0%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
C12orf40	283461	genome.wustl.edu	37	12	40114899	40114899	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031748.2	+1	validated	p.S602Y	0.000	220	0%	49	40.8%	0	-	possibly_damaging(0.745)	-	-	NULL
LRRK2	120892	genome.wustl.edu	37	12	40704285	40704285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198578.3	+1	reviewed	p.S1457Y	1.000	84	0%	37	35.1%	0	-	probably_damaging(0.963)	tolerated(0.19)	neutral(0.455)	superfamily_SSF52540
LRRK2	120892	genome.wustl.edu	37	12	40758823	40758823	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198578.3	+1	reviewed	p.S2454L	1.000	150	0%	44	47.7%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_WD40_like
CNTN1	1272	genome.wustl.edu	37	12	41316163	41316163	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001843.2	+1	reviewed	p.I111M	0.339	218	0%	76	17.1%	7	14.2%	benign(0.133)	tolerated(0.2)	neutral(0.060)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
PDZRN4	29951	genome.wustl.edu	37	12	41585299	41585299	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000402685	+1	known	p.E230*	1.000	379	0%	162	42.6%	0	-	-	-	-	HMMPfam_PDZ,superfamily_PDZ domain-like
PDZRN4	29951	genome.wustl.edu	37	12	41831759	41831759	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013377.3	+1	validated	p.L5	1.000	324	0%	76	38.2%	0	-	-	-	-	NULL
PDZRN4	29951	genome.wustl.edu	37	12	41900312	41900312	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013377.3	+1	validated	p.R42C	1.000	115	0%	38	60.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_PDZ
PDZRN4	29951	genome.wustl.edu	37	12	41900435	41900435	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013377.3	+1	validated	p.E83K	1.000	90	0%	36	41.7%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
PDZRN4	29951	genome.wustl.edu	37	12	41966269	41966269	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013377.3	+1	validated	p.R305Q	0.999	84	0%	24	37.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
GXYLT1	283464	genome.wustl.edu	37	12	42499642	42499642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173601.1	-1	validated	p.R281Q	1.000	286	0%	103	44.7%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases
GXYLT1	283464	genome.wustl.edu	37	12	42523611	42523611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173601.1	-1	validated	p.M88I	1.000	215	0%	85	42.4%	0	-	benign(0.022)	deleterious(0)	neutral(0.446)	NULL
LOC100288182	100288182	genome.wustl.edu	37	12	42853866	42853866	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343186.1	+1	model	p.S93A	0.000	108	0%	65	23.1%	4	0%	-	-	-	NULL
PRICKLE1	144165	genome.wustl.edu	37	12	42858859	42858859	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144881.1	-1	reviewed	p.R326Q	0.814	81	0%	50	30%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ADAMTS20	80070	genome.wustl.edu	37	12	43770410	43770410	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025003.3	-1	validated	p.C1681Y	0.992	262	0%	114	42.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ADAMTS20	80070	genome.wustl.edu	37	12	43833724	43833724	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025003.3	-1	validated	p.R813	0.138	463	0%	189	51.3%	0	-	-	-	-	HMMPfam_ADAM_spacer1
ADAMTS20	80070	genome.wustl.edu	37	12	43886329	43886329	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025003.3	-1	validated	p.D352A	1.000	190	0%	118	14.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ANO6	196527	genome.wustl.edu	37	12	45796888	45796888	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142679.1	+1	validated	p.S549N	1.000	379	0%	145	39.3%	10	20%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
ANO6	196527	genome.wustl.edu	37	12	45814882	45814882	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142679.1	+1	validated	p.M749T	1.000	238	0%	95	38.9%	16	56.2%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_DUF590
ARID2	196528	genome.wustl.edu	37	12	46230572	46230572	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152641.2	+1	validated	p.R274Q	1.000	439	0.2%	218	46.3%	5	40%	probably_damaging(0.993)	tolerated(0.06)	deleterious(0.772)	NULL
ARID2	196528	genome.wustl.edu	37	12	46233125	46233125	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000422737	+1	known	p.V422A	1.000	97	0%	60	41.7%	8	25%	-	-	-	NULL
ARID2	196528	genome.wustl.edu	37	12	46298840	46298840	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152641.2	+1	validated	p.K1829N	1.000	216	0%	89	37.1%	8	25%	benign(0.053)	deleterious(0.02)	neutral(0.387)	NULL
SCAF11	9169	genome.wustl.edu	37	12	46320729	46320729	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004719.2	-1	validated	p.D919Y	1.000	180	0%	87	44.8%	16	43.7%	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	NULL
SCAF11	9169	genome.wustl.edu	37	12	46321461	46321461	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004719.2	-1	validated	p.T675A	0.000	162	0%	63	15.9%	12	8.3%	benign(0.001)	tolerated(0.05)	neutral(0.345)	NULL
SLC38A1	81539	genome.wustl.edu	37	12	46582765	46582765	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000354341	-1	known	p.T483M	0.000	100	0%	36	44.4%	25	40%	-	-	-	NULL
SLC38A2	54407	genome.wustl.edu	37	12	46765006	46765006	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018976.4	-1	validated	p.S24N	1.000	199	0%	130	32.3%	76	51.3%	benign(0.429)	tolerated(0.14)	neutral(0.389)	NULL
AMIGO2	347902	genome.wustl.edu	37	12	47472052	47472052	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143668.1	-1	validated	p.R245H	0.918	36	0%	33	15.2%	15	0%	benign(0.034)	tolerated(0.54)	neutral(0.009)	HMMSmart_LRRCT,superfamily_SSF52058
ENDOU	8909	genome.wustl.edu	37	12	48110685	48110685	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006025.3	-1	reviewed	p.R139H	0.761	165	0%	127	52%	0	-	benign(0.001)	tolerated(0.54)	neutral(0.007)	HMMPfam_XendoU
RAPGEF3	10411	genome.wustl.edu	37	12	48137357	48137357	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098531.2	-1	validated	p.G594D	0.899	21	0%	28	46.4%	1	100%	probably_damaging(0.961)	tolerated(0.07)	deleterious(0.723)	superfamily_Ras GEF
HDAC7	51564	genome.wustl.edu	37	12	48177971	48177971	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380610	-1	known	p.W993*	1.000	21	0%	18	33.3%	43	39.5%	-	-	-	NULL
VDR	7421	genome.wustl.edu	37	12	48258886	48258886	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000376.2	-1	reviewed	p.R74H	1.000	27	0%	21	38.1%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
COL2A1	1280	genome.wustl.edu	37	12	48369786	48369786	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001844.4	-1	reviewed	p.P1186H	1.000	23	0%	25	40%	4	75%	unknown(0)	deleterious(0)	-	HMMPfam_Collagen
COL2A1	1280	genome.wustl.edu	37	12	48378778	48378778	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001844.4	-1	reviewed	p.N611	1.000	33	0%	19	47.4%	9	33.3%	-	-	-	HMMPfam_Collagen
ASB8	140461	genome.wustl.edu	37	12	48547192	48547192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024095.3	-1	validated	p.R30C	1.000	130	0%	89	44.9%	17	70.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SNORA34	677815	genome.wustl.edu	37	12	49048248	49048248	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_002968.1	-1	provisional	NULL	0.998	48	0%	27	44.4%	4	0%	-	-	-	-
CACNB3	784	genome.wustl.edu	37	12	49217528	49217528	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000725.2	+1	validated	p.C78Y	1.000	51	0%	57	42.1%	35	45.7%	possibly_damaging(0.849)	deleterious(0.02)	deleterious(0.709)	superfamily_SH3-domain
RND1	27289	genome.wustl.edu	37	12	49252018	49252018	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014470.3	-1	validated	p.A154T	0.974	56	0%	51	45.1%	1	0%	benign(0.004)	tolerated(0.49)	neutral(0.011)	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
RND1	27289	genome.wustl.edu	37	12	49254844	49254844	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014470.3	-1	validated	p.R130Q	1.000	27	0%	31	38.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
PRKAG1	5571	genome.wustl.edu	37	12	49396974	49396974	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002733.3	-1	reviewed	p.L281M	1.000	192	0%	161	54%	60	46.6%	possibly_damaging(0.795)	tolerated(0.1)	deleterious(0.585)	HMMPfam_CBS,HMMSmart_CBS,superfamily_SSF54631
PRKAG1	5571	genome.wustl.edu	37	12	49399304	49399304	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002733.3	-1	reviewed	p.L64S	1.000	109	0.9%	59	35.6%	37	48.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_CBS,HMMSmart_CBS
MLL2	8085	genome.wustl.edu	37	12	49416077	49416077	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003482.3	-1	validated	p.T5466	0.045	83	0%	53	39.6%	42	28.5%	-	-	-	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
MLL2	8085	genome.wustl.edu	37	12	49425145	49425145	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003482.3	-1	validated	p.H4448R	1.000	30	0%	29	31%	19	78.9%	unknown(0)	-	-	NULL
MLL2	8085	genome.wustl.edu	37	12	49427312	49427312	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003482.3	-1	validated	p.Q3726*	1.000	5	0.000	12	0.333	13	53.8%	-	-	-	NULL
MLL2	8085	genome.wustl.edu	37	12	49438624	49438624	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003482.3	-1	validated	p.G1622	0.983	34	0%	41	36.6%	9	66.6%	-	-	-	NULL
LMBR1L	55716	genome.wustl.edu	37	12	49491511	49491511	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018113.2	-1	validated	p.L472	0.998	28	0%	28	39.3%	29	55.1%	-	-	-	NULL
TUBA1A	7846	genome.wustl.edu	37	12	49578950	49578950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006009.2	-1	reviewed	p.A400V	1.000	154	0%	132	14.4%	218	7.3%	benign(0.418)	deleterious(0)	deleterious(0.580)	superfamily_Tubulin C-terminal domain-like
TROAP	10024	genome.wustl.edu	37	12	49724137	49724137	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005480.3	+1	validated	p.P503	0.229	32	0%	47	53.2%	27	33.3%	-	-	-	NULL
DNAJC22	79962	genome.wustl.edu	37	12	49743154	49743154	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024902.2	+1	provisional	p.R167C	1.000	25	0%	30	43.3%	14	35.7%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
SPATS2	65244	genome.wustl.edu	37	12	49883261	49883261	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023071.3	+1	validated	p.R40H	1.000	278	0%	128	33.6%	19	36.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KCNH3	23416	genome.wustl.edu	37	12	49937103	49937103	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012284.1	+1	validated	p.A209T	0.997	16	0%	12	41.7%	3	66.6%	benign(0.183)	tolerated(0.26)	neutral(0.051)	NULL
KCNH3	23416	genome.wustl.edu	37	12	49938098	49938098	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012284.1	+1	validated	p.V374	1.000	17	0%	15	40%	2	0%	-	-	-	HMMPfam_Ion_trans,superfamily_SSF81324
KCNH3	23416	genome.wustl.edu	37	12	49948128	49948128	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012284.1	+1	validated	p.D643N	0.999	10	0.000	8	0.625	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_cNMP_binding,HMMSmart_cNMP,superfamily_cNMP_binding
MCRS1	10445	genome.wustl.edu	37	12	49952465	49952465	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012300.1	-1	validated	p.A463	1.000	13	0%	22	31.8%	86	44.1%	-	-	-	NULL
MCRS1	10445	genome.wustl.edu	37	12	49953520	49953520	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012300.1	-1	validated	p.S345I	1.000	20	0%	32	65.6%	73	39.7%	benign(0.029)	deleterious(0.04)	neutral(0.350)	NULL
FAM186B	84070	genome.wustl.edu	37	12	49993257	49993257	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032130.2	-1	validated	p.S722	0.985	48	0%	41	12.2%	1	0%	-	-	-	NULL
FAM186B	84070	genome.wustl.edu	37	12	49993563	49993563	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032130.2	-1	validated	p.P620	0.001	40	0%	49	42.9%	2	0%	-	-	-	NULL
FMNL3	91010	genome.wustl.edu	37	12	50043318	50043318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175736.4	-1	validated	p.L747F	1.000	107	0%	68	41.2%	8	37.5%	benign(0.132)	deleterious(0.01)	neutral(0.417)	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd
TMBIM6	7009	genome.wustl.edu	37	12	50152177	50152177	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098576.1	+1	validated	p.T174I	1.000	289	0%	240	16.3%	532	10.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	PatternScan_BI1,HMMPfam_UPF0005
AQP6	363	genome.wustl.edu	37	12	50367181	50367181	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001652.3	+1	reviewed	p.K75N	1.000	10	0%	11	36.4%	2	50%	possibly_damaging(0.907)	deleterious(0)	deleterious(0.805)	HMMPfam_MIP,superfamily_MIP
AQP6	363	genome.wustl.edu	37	12	50369415	50369415	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001652.3	+1	reviewed	p.S270	0.001	16	0%	16	50%	2	50%	-	-	-	NULL
RACGAP1	29127	genome.wustl.edu	37	12	50386109	50386109	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001126103.1	-1	validated	p.V499	1.000	91	0%	48	43.8%	36	44.4%	-	-	-	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
ASIC1	41	genome.wustl.edu	37	12	50452634	50452634	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020039.2	+1	reviewed	p.G29S	1.000	11	0%	12	33.3%	6	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ASC
LIMA1	51474	genome.wustl.edu	37	12	50571459	50571459	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113546.1	-1	validated	p.W557*	1.000	95	0%	81	49.4%	10	20%	-	-	-	NULL
FAM186A	121006	genome.wustl.edu	37	12	50744330	50744330	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145475.1	-1	provisional	p.S2095	0.004	296	0%	223	11.7%	0	-	-	-	-	NULL
FAM186A	121006	genome.wustl.edu	37	12	50747151	50747151	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145475.1	-1	provisional	p.P1155Q	0.000	75	0%	62	17.7%	0	-	possibly_damaging(0.722)	tolerated(0.47)	neutral(0.273)	NULL
FAM186A	121006	genome.wustl.edu	37	12	50748691	50748691	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145475.1	-1	provisional	p.S642T	0.000	101	0%	36	36.1%	0	-	benign(0.256)	deleterious(0.04)	neutral(0.376)	NULL
ATF1	466	genome.wustl.edu	37	12	51189733	51189733	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005171.3	+1	validated	p.S45	0.744	181	0%	86	40.7%	10	20%	-	-	-	HMMPfam_pKID
TMPRSS12	283471	genome.wustl.edu	37	12	51252610	51252610	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182559.2	+1	validated	p.I142M	0.001	154	0%	73	47.9%	0	-	possibly_damaging(0.915)	tolerated(0.19)	neutral(0.416)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
SLC11A2	4891	genome.wustl.edu	37	12	51390716	51390716	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000617.2	-1	reviewed	p.G239S	1.000	41	0%	22	36.4%	43	53.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Nramp
LETMD1	25875	genome.wustl.edu	37	12	51450194	51450194	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015416.3	+1	validated	p.R275H	1.000	108	0%	58	29.3%	44	34%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_LETM1
POU6F1	5463	genome.wustl.edu	37	12	51590653	51590653	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026893.1	-1	validated	NULL	1.000	57	0%	54	50%	2	50%	-	-	-	-
CELA1	1990	genome.wustl.edu	37	12	51735145	51735145	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001971.5	-1	reviewed	p.R116C	1.000	58	0%	39	51.3%	0	-	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
NR4A1	3164	genome.wustl.edu	37	12	52450347	52450347	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002135.3	+1	reviewed	p.A359D	1.000	18	0%	29	31%	67	41.7%	benign(0.168)	deleterious(0.03)	neutral(0.380)	superfamily_Nuclear receptor ligand-binding domain
NR4A1	3164	genome.wustl.edu	37	12	52450425	52450425	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002135.3	+1	reviewed	p.S385F	1.000	15	0%	28	57.1%	57	33.3%	possibly_damaging(0.679)	deleterious(0)	deleterious(0.686)	superfamily_Nuclear receptor ligand-binding domain
KRT83	3889	genome.wustl.edu	37	12	52713006	52713006	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002282.3	-1	reviewed	p.A176D	1.000	64	0%	67	32.8%	0	-	probably_damaging(0.997)	tolerated(0.38)	deleterious(0.484)	HMMPfam_Filament
KRT77	374454	genome.wustl.edu	37	12	53090208	53090208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175078.2	-1	reviewed	p.E255D	1.000	106	0%	63	14.3%	0	-	probably_damaging(0.992)	tolerated(0.06)	deleterious(0.770)	HMMPfam_Filament
KRT76	51350	genome.wustl.edu	37	12	53171005	53171005	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015848.4	-1	reviewed	p.V24A	0.779	47	0%	38	28.9%	0	-	unknown(0)	tolerated(0.23)	-	NULL
KRT4	3851	genome.wustl.edu	37	12	53205601	53205601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002272.2	-1	reviewed	p.R282H	0.766	124	0%	107	10.3%	0	-	benign(0.031)	deleterious(0.04)	neutral(0.350)	HMMPfam_Filament
ENSG00000247550	0	genome.wustl.edu	37	12	53433281	53433281	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000499537	-1	novel	NULL	0.000	92	0%	51	43.1%	4	0%	-	-	-	-
TENC1	23371	genome.wustl.edu	37	12	53452596	53452596	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015319.2	+1	reviewed	p.E474K	1.000	13	0%	13	38.5%	2	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
SPRYD3	84926	genome.wustl.edu	37	12	53470997	53470997	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032840.2	-1	validated	p.F24L	1.000	125	0%	103	51.5%	18	50%	benign(0.002)	tolerated(0.16)	neutral(0.059)	NULL
CSAD	51380	genome.wustl.edu	37	12	53567175	53567175	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015989.4	-1	validated	p.V54A	0.947	41	0%	34	50%	5	20%	benign(0.017)	tolerated(0.23)	neutral(0.042)	NULL
CSAD	51380	genome.wustl.edu	37	12	53567187	53567187	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015989.4	-1	validated	p.A50V	0.005	40	0%	33	39.4%	3	33.3%	benign(0.024)	tolerated(0.4)	neutral(0.017)	NULL
ITGB7	3695	genome.wustl.edu	37	12	53594184	53594184	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000889.1	-1	provisional	p.S15N	1.000	45	0%	32	28.1%	0	-	benign(0.007)	tolerated(0.28)	neutral(0.032)	NULL
RARG	5916	genome.wustl.edu	37	12	53607927	53607927	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000425354	-1	known	p.S182N	1.000	34	0%	31	25.8%	32	3.1%	-	-	-	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
ESPL1	9700	genome.wustl.edu	37	12	53673580	53673580	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012291.4	+1	validated	p.S810L	0.000	18	0%	20	35%	5	40%	benign(0)	tolerated(0.08)	neutral(0.300)	NULL
ESPL1	9700	genome.wustl.edu	37	12	53681861	53681861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012291.4	+1	validated	p.A1428T	0.153	15	0.000	7	0.571	8	75%	benign(0)	tolerated(0.86)	neutral(0.001)	NULL
ESPL1	9700	genome.wustl.edu	37	12	53684634	53684634	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012291.4	+1	validated	p.A1792T	0.820	40	0%	34	23.5%	10	40%	benign(0)	tolerated(0.96)	-	HMMPfam_Peptidase_C50
ESPL1	9700	genome.wustl.edu	37	12	53686741	53686741	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012291.4	+1	validated	p.I2050V	1.000	56	0%	41	46.3%	17	47%	benign(0.232)	deleterious(0.02)	neutral(0.406)	HMMPfam_Peptidase_C50
AAAS	8086	genome.wustl.edu	37	12	53708190	53708190	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015665.5	-1	reviewed	p.R194Q	1.000	44	0%	46	37%	87	63.2%	probably_damaging(0.983)	deleterious(0.04)	deleterious(0.778)	HMMSmart_WD40,superfamily_WD40_like
AMHR2	269	genome.wustl.edu	37	12	53818568	53818568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020547.2	+1	reviewed	p.G103D	0.975	7	0.000	15	0.467	0	-	benign(0.236)	tolerated(0.41)	neutral(0.038)	superfamily_Snake toxin-like
HOXC6	3223	genome.wustl.edu	37	12	54422555	54422555	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004503.3	+1	reviewed	p.L84I	1.000	60	0%	53	13.2%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
HOXC6	3223	genome.wustl.edu	37	12	54422673	54422673	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004503.3	+1	reviewed	p.Y123C	1.000	72	0%	42	38.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_ANTENNAPEDIA
COPZ1	22818	genome.wustl.edu	37	12	54741614	54741614	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016057.1	+1	provisional	p.E127D	1.000	461	0%	309	40.5%	161	52.1%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Clat_adaptor_s,superfamily_SNARE-like
GTSF1	121355	genome.wustl.edu	37	12	54854250	54854250	+	Missense_Mutation	SNP	G	G	A	rs186804345	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144594.2	-1	validated	p.A133V	1.000	113	0%	90	42.2%	0	-	benign(0.002)	tolerated(0.16)	neutral(0.059)	HMMPfam_UPF0224
LACRT	90070	genome.wustl.edu	37	12	55026130	55026130	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033277.1	-1	reviewed	p.P50S	0.000	170	0%	107	37.4%	0	-	benign(0.001)	tolerated(1)	-	NULL
NEUROD4	58158	genome.wustl.edu	37	12	55420723	55420723	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021191.2	+1	validated	p.S167N	1.000	52	0%	28	39.3%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	superfamily_HLH_basic
OR9K2	441639	genome.wustl.edu	37	12	55524252	55524252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005243.1	+1	provisional	p.P234S	0.001	180	0%	71	49.3%	0	-	probably_damaging(1)	tolerated(0.48)	deleterious(0.510)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR6C6	283365	genome.wustl.edu	37	12	55688102	55688102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005493.1	-1	provisional	p.K305N	0.349	142	0%	45	55.6%	0	-	benign(0.043)	deleterious(0.01)	neutral(0.408)	superfamily_SSF81321
OR6C6	283365	genome.wustl.edu	37	12	55688625	55688625	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005493.1	-1	provisional	p.P131Q	0.003	46	0%	22	22.7%	0	-	possibly_damaging(0.455)	tolerated(0.39)	neutral(0.165)	HMMPfam_7tm_1,superfamily_SSF81321
OR6C1	390321	genome.wustl.edu	37	12	55714592	55714592	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005182.1	+1	provisional	p.S70L	0.007	301	0%	96	50%	0	-	possibly_damaging(0.681)	tolerated(1)	neutral(0.243)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PHC1P1	653441	genome.wustl.edu	37	12	55805812	55805812	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000326184	-1	known	p.S903	0.928	207	0%	125	42.4%	21	0%	-	-	-	NULL
ITGA7	3679	genome.wustl.edu	37	12	56081844	56081844	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144996.1	-1	reviewed	p.V1036M	1.000	32	0%	43	44.2%	2	0%	benign(0.257)	tolerated(0.24)	neutral(0.064)	superfamily_Integrin domains
SARNP	84324	genome.wustl.edu	37	12	56188601	56188601	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033082.3	-1	reviewed	p.R123W	0.994	88	0%	37	67.6%	54	1.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SARNP	84324	genome.wustl.edu	37	12	56189808	56189808	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033082.3	-1	reviewed	e5+1	1.000	386	0%	136	46.3%	0	-	-	-	-	-
MMP19	4327	genome.wustl.edu	37	12	56230955	56230955	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002429.4	-1	reviewed	p.N464	0.004	156	0%	77	42.9%	3	0%	-	-	-	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120
WIBG	84305	genome.wustl.edu	37	12	56295804	56295804	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032345.2	-1	validated	p.N156S	1.000	70	0%	65	58.5%	32	40.6%	possibly_damaging(0.527)	deleterious(0.05)	deleterious(0.523)	NULL
CDK2	1017	genome.wustl.edu	37	12	56360830	56360830	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001798.3	+1	reviewed	p.G13D	1.000	123	0%	117	39.3%	26	30.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
ESYT1	23344	genome.wustl.edu	37	12	56537074	56537074	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015292.2	+1	validated	p.S1061F	1.000	64	0%	56	46.4%	66	48.4%	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SMARCC2	6601	genome.wustl.edu	37	12	56558433	56558433	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003075.3	-1	reviewed	p.A1074	1.000	88	0%	73	39.7%	60	41.6%	-	-	-	NULL
SMARCC2	6601	genome.wustl.edu	37	12	56568539	56568539	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003075.3	-1	reviewed	p.A464	0.989	95	0%	69	29%	56	39.2%	-	-	-	HMMPfam_SWIRM
SMARCC2	6601	genome.wustl.edu	37	12	56578891	56578891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003075.3	-1	reviewed	p.R108C	1.000	149	1.3%	116	32.8%	28	32.1%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
RNF41	10193	genome.wustl.edu	37	12	56604188	56604188	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005785.2	-1	reviewed	p.N85	1.000	23	0%	37	18.9%	62	8%	-	-	-	superfamily_TRAF domain-like,superfamily_RING/U-box
ANKRD52	283373	genome.wustl.edu	37	12	56646830	56646830	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173595.3	-1	validated	p.L381I	1.000	63	0%	61	49.2%	34	41.1%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
COQ10A	93058	genome.wustl.edu	37	12	56661712	56661712	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144576.3	+1	validated	p.R90H	1.000	76	0%	69	52.2%	8	62.5%	possibly_damaging(0.885)	deleterious(0.01)	deleterious(0.752)	NULL
PAN2	9924	genome.wustl.edu	37	12	56713126	56713126	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127460.2	-1	reviewed	p.G1083D	1.000	182	0%	99	38.4%	18	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00479,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T
STAT2	6773	genome.wustl.edu	37	12	56742814	56742814	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005419.3	-1	reviewed	p.K490N	0.001	30	0%	29	55.2%	25	36%	unknown(0)	tolerated(0.48)	-	superfamily_p53-like transcription factors,HMMPfam_STAT_bind
STAT2	6773	genome.wustl.edu	37	12	56748600	56748600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005419.3	-1	reviewed	p.L199M	0.815	298	0%	190	40%	16	25%	probably_damaging(0.953)	deleterious(0.01)	deleterious(0.802)	HMMPfam_STAT_alpha,superfamily_STAT
TIMELESS	8914	genome.wustl.edu	37	12	56814388	56814388	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003920.3	-1	validated	p.R1065C	0.990	37	0%	28	42.9%	35	51.4%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMPfam_TIMELESS_C
ATP5B	506	genome.wustl.edu	37	12	57037270	57037270	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001686.3	-1	reviewed	p.G237S	1.000	164	0%	92	37%	567	44%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_ATP-synt_ab,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
GPR182	11318	genome.wustl.edu	37	12	57389825	57389825	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007264.3	+1	reviewed	p.L278M	0.057	47	0%	34	26.5%	0	-	benign(0.052)	tolerated(0.29)	neutral(0.032)	HMMPfam_7tm_1,superfamily_SSF81321
TAC3	6866	genome.wustl.edu	37	12	57406442	57406442	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000357616	-1	known	p.K124	0.000	91	0%	52	55.8%	0	-	-	-	-	NULL
MYO1A	4640	genome.wustl.edu	37	12	57430558	57430558	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005379.2	-1	reviewed	p.K758Q	1.000	316	0%	191	17.3%	0	-	benign(0.349)	tolerated(0.33)	neutral(0.135)	HMMPfam_IQ,HMMSmart_IQ
MYO1A	4640	genome.wustl.edu	37	12	57437031	57437031	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005379.2	-1	reviewed	p.V335G	0.996	161	0%	91	41.8%	0	-	benign(0.046)	tolerated(0.07)	neutral(0.322)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
STAT6	6778	genome.wustl.edu	37	12	57500334	57500334	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003153.4	-1	reviewed	p.A170T	0.735	171	0%	110	37.3%	26	53.8%	benign(0)	tolerated(0.12)	neutral(0.261)	HMMPfam_STAT_alpha,superfamily_STAT
LRP1	4035	genome.wustl.edu	37	12	57567663	57567663	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002332.2	+1	reviewed	p.S1149	0.240	39	0%	32	53.1%	41	53.6%	-	-	-	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,superfamily_LDL receptor-like module
LRP1	4035	genome.wustl.edu	37	12	57591140	57591140	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002332.2	+1	reviewed	p.D3045	0.518	57	0%	61	39.3%	42	57.1%	-	-	-	superfamily_YWTD domain
LRP1	4035	genome.wustl.edu	37	12	57598275	57598275	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002332.2	+1	reviewed	p.D3678E	1.000	42	0%	33	36.4%	66	40.9%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,superfamily_LDL receptor-like module
LRP1	4035	genome.wustl.edu	37	12	57599192	57599192	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002332.2	+1	reviewed	p.C3798	0.904	8	0.000	6	0.667	56	32.1%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin
LRP1	4035	genome.wustl.edu	37	12	57600463	57600463	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002332.2	+1	reviewed	p.A3933V	0.847	34	0%	27	40.7%	90	42.2%	benign(0.018)	tolerated(0.54)	neutral(0.008)	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain
SHMT2	6472	genome.wustl.edu	37	12	57625551	57625551	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005412.5	+1	reviewed	p.A123T	1.000	47	0%	43	53.5%	148	49.3%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_SHMT,superfamily_PyrdxlP-dep_Trfase_major
GLI1	2735	genome.wustl.edu	37	12	57858456	57858456	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005269.2	+1	reviewed	p.G65D	0.047	37	0%	31	35.5%	1	0%	possibly_damaging(0.55)	deleterious(0.01)	deleterious(0.593)	NULL
MBD6	114785	genome.wustl.edu	37	12	57919952	57919952	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052897.3	+1	validated	p.L401I	0.891	33	0%	40	37.5%	82	50%	unknown(0)	-	-	NULL
MBD6	114785	genome.wustl.edu	37	12	57920417	57920417	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052897.3	+1	validated	p.E497K	0.865	15	0%	17	29.4%	44	36.3%	unknown(0)	-	-	NULL
ARHGEF25	115557	genome.wustl.edu	37	12	58009470	58009470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111270.1	+1	validated	p.G444E	1.000	102	0%	92	34.8%	53	49%	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	superfamily_PH domain-like
AGAP2	116986	genome.wustl.edu	37	12	58128374	58128374	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122772.1	-1	validated	e3+1	1.000	83	0%	68	39.7%	0	-	-	-	-	-
MARCH9	92979	genome.wustl.edu	37	12	58150751	58150751	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138396.4	+1	validated	p.R133C	1.000	11	0%	13	46.2%	18	72.2%	benign(0.309)	deleterious(0)	deleterious(0.541)	HMMSmart_SM00744,HMMPfam_zf-C3HC4
CYP27B1	1594	genome.wustl.edu	37	12	58157400	58157400	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000785.3	-1	reviewed	p.L469	1.000	44	0%	29	13.8%	1	100%	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP27B1	1594	genome.wustl.edu	37	12	58157883	58157883	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000785.3	-1	reviewed	p.N405H	1.000	56	0%	66	48.5%	5	40%	possibly_damaging(0.639)	tolerated(0.07)	deleterious(0.542)	HMMPfam_p450,superfamily_Cytochrome P450
TSFM	10102	genome.wustl.edu	37	12	58180024	58180024	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005726.5	+1	reviewed	p.E104K	1.000	166	0%	84	33.3%	29	51.7%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_EF_TS,superfamily_Elongation factor Ts (EF-Ts) dimerisation domain
SLC16A7	9194	genome.wustl.edu	37	12	60169010	60169010	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004731.3	+1	provisional	p.R312*	0.997	314	0%	86	47.7%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
SLC16A7	9194	genome.wustl.edu	37	12	60173310	60173310	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004731.3	+1	provisional	p.Y429	1.000	120	0.8%	45	42.2%	0	-	-	-	-	superfamily_MFS_gen_substrate_transporter
PPM1H	57460	genome.wustl.edu	37	12	63042319	63042319	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020700.1	-1	validated	p.D499N	1.000	121	0%	64	18.8%	15	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain
PPM1H	57460	genome.wustl.edu	37	12	63114004	63114004	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020700.1	-1	validated	p.Q340	1.000	323	0%	134	35.1%	7	28.5%	-	-	-	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain
SRGAP1	57522	genome.wustl.edu	37	12	64377783	64377783	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020762.2	+1	validated	p.R42*	1.000	143	0%	59	13.6%	2	0%	-	-	-	HMMPfam_FCH,HMMSmart_SM00055
C12orf66	144577	genome.wustl.edu	37	12	64587856	64587856	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152440.4	-1	validated	p.M368I	1.000	94	0%	79	45.6%	1	100%	benign(0.077)	tolerated(0.68)	neutral(0.007)	HMMPfam_DUF2003
TBK1	29110	genome.wustl.edu	37	12	64868037	64868037	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013254.2	+1	reviewed	p.L190	1.000	172	0%	60	43.3%	9	33.3%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
LEMD3	23592	genome.wustl.edu	37	12	65612348	65612348	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014319.4	+1	reviewed	p.G548	1.000	208	0%	71	38%	8	37.5%	-	-	-	NULL
LEMD3	23592	genome.wustl.edu	37	12	65634753	65634753	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014319.4	+1	reviewed	p.R731C	1.000	195	0%	85	43.5%	19	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MAN1_C
LLPH	84298	genome.wustl.edu	37	12	66517676	66517676	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032338.3	-1	validated	p.R112	0.000	828	0.1%	430	48.1%	57	33.3%	-	-	-	HMMPfam_Laps
GRIP1	23426	genome.wustl.edu	37	12	66742964	66742964	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021150.3	-1	reviewed	p.S1022	0.690	196	0%	123	49.6%	9	33.3%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
CAND1	55832	genome.wustl.edu	37	12	67696164	67696164	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018448.3	+1	validated	p.A354	0.953	112	0%	55	45.5%	61	57.3%	-	-	-	superfamily_ARM repeat
CAND1	55832	genome.wustl.edu	37	12	67698404	67698404	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018448.3	+1	validated	p.A438V	1.000	218	0%	63	41.3%	32	50%	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	superfamily_ARM repeat
MDM2	4193	genome.wustl.edu	37	12	69233596	69233596	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002392.3	+1	reviewed	p.P487	0.951	209	0%	98	39.8%	24	83.3%	-	-	-	superfamily_RING/U-box
CPM	1368	genome.wustl.edu	37	12	69250228	69250228	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005502.2	-1	reviewed	p.F441L	0.925	174	0%	77	13%	33	3%	benign(0)	tolerated(0.35)	neutral(0.021)	NULL
LRRC10	376132	genome.wustl.edu	37	12	70003993	70003993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201550.2	-1	provisional	p.A209V	0.959	32	0%	28	42.9%	0	-	benign(0)	tolerated(0.33)	neutral(0.024)	superfamily_SSF52058
CNOT2	4848	genome.wustl.edu	37	12	70724133	70724133	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014515.4	+1	provisional	p.I151M	1.000	108	0%	25	40%	23	52.1%	benign(0)	tolerated(0.21)	neutral(0.044)	NULL
KCNMB4	27345	genome.wustl.edu	37	12	70824272	70824272	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014505.4	+1	reviewed	p.D158N	0.990	67	0%	42	19%	4	25%	probably_damaging(0.996)	tolerated(0.76)	neutral(0.463)	HMMPfam_CaKB
TSPAN8	7103	genome.wustl.edu	37	12	71523148	71523148	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004616.2	-1	reviewed	p.I208R	0.004	268	0%	81	42%	1	0%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_Tetraspannin
LGR5	8549	genome.wustl.edu	37	12	71972593	71972593	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003667.2	+1	provisional	p.S430	0.706	330	0%	143	46.9%	27	55.5%	-	-	-	HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like
ZFC3H1	196441	genome.wustl.edu	37	12	72057223	72057223	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144982.4	-1	validated	p.R56	1.000	5	0.000	9	0.444	1	100%	-	-	-	NULL
TBC1D15	64786	genome.wustl.edu	37	12	72288135	72288135	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022771.4	+1	reviewed	p.W230R	1.000	281	0%	100	41%	1	0%	benign(0.337)	tolerated(0.36)	neutral(0.126)	NULL
TRHDE	29953	genome.wustl.edu	37	12	72863540	72863540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013381.2	+1	reviewed	p.L395F	1.000	313	0%	151	43%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Peptidase_M1,superfamily_SSF55486
TRHDE	29953	genome.wustl.edu	37	12	72863633	72863633	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013381.2	+1	reviewed	p.S426P	1.000	491	0%	214	38.8%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Peptidase_M1,superfamily_SSF55486
KCNC2	3747	genome.wustl.edu	37	12	75601430	75601430	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139137.2	-1	reviewed	p.A112T	1.000	7	0.000	8	0.500	1	0%	benign(0.19)	tolerated(0.17)	neutral(0.077)	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
CAPS2	84698	genome.wustl.edu	37	12	75683521	75683521	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032606.3	-1	validated	p.V444	1.000	458	0%	171	35.7%	0	-	-	-	-	superfamily_EF-hand
OSBPL8	114882	genome.wustl.edu	37	12	76750488	76750488	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020841.4	-1	reviewed	p.T819A	1.000	885	0%	388	44.8%	19	47.3%	benign(0)	tolerated(0.81)	neutral(0.001)	NULL
CSRP2	1466	genome.wustl.edu	37	12	77256957	77256957	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001321.1	-1	reviewed	p.S94G	1.000	47	0%	41	14.6%	73	20.5%	benign(0)	tolerated(0.27)	neutral(0.034)	superfamily_Glucocorticoid receptor-like (DNA-binding domain)
E2F7	144455	genome.wustl.edu	37	12	77417951	77417951	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000416496	-1	known	p.D719N	0.996	98	0%	74	33.8%	15	46.6%	unknown(0)	-	-	NULL
NAV3	89795	genome.wustl.edu	37	12	78452857	78452857	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014903.4	+1	validated	p.I866	0.981	112	0%	43	46.5%	2	50%	-	-	-	NULL
NAV3	89795	genome.wustl.edu	37	12	78594320	78594320	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014903.4	+1	validated	p.W2239*	1.000	575	0%	116	42.2%	0	-	-	-	-	NULL
OTOGL	283310	genome.wustl.edu	37	12	80626840	80626840	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343203.1	+1	model	p.Y201	0.997	203	0%	74	48.6%	0	-	-	-	-	HMMPfam_VWD,HMMSmart_SM00216
OTOGL	283310	genome.wustl.edu	37	12	80647325	80647325	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000455751	+1	known	p.V138A	0.971	373	0%	166	48.8%	0	-	-	-	-	superfamily_Serine proterase inhibitors
OTOGL	283310	genome.wustl.edu	37	12	80707392	80707392	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000442704	+1	known	p.G33*	1.000	329	0%	163	42.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C8
PTPRQ	374462	genome.wustl.edu	37	12	80900413	80900413	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000266688	+1	known	p.R841W	1.000	236	0%	91	45.1%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_fn3,superfamily_Fibronectin type III
PTPRQ	374462	genome.wustl.edu	37	12	80904161	80904161	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000266688	+1	known	p.L873	1.000	287	0%	114	47.4%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
LIN7A	8825	genome.wustl.edu	37	12	81239622	81239622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004664.2	-1	validated	p.G124R	1.000	126	0%	64	43.8%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
PPFIA2	8499	genome.wustl.edu	37	12	81688701	81688701	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003625.2	-1	reviewed	p.S946	1.000	171	0%	62	38.7%	59	44%	-	-	-	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
PPFIA2	8499	genome.wustl.edu	37	12	81693100	81693100	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003625.2	-1	reviewed	p.T902A	1.000	161	0%	72	36.1%	45	53.3%	benign(0.395)	tolerated(0.07)	neutral(0.446)	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
PPFIA2	8499	genome.wustl.edu	37	12	81741496	81741496	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003625.2	-1	reviewed	p.N683S	1.000	115	0%	55	30.9%	21	76.1%	benign(0)	tolerated(1)	-	NULL
PPFIA2	8499	genome.wustl.edu	37	12	82147998	82147998	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003625.2	-1	reviewed	p.M1I	1.000	93	0%	55	34.5%	0	-	probably_damaging(0.962)	deleterious(0)	deleterious(0.850)	NULL
C12orf26	84190	genome.wustl.edu	37	12	82783637	82783637	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032230.2	+1	validated	p.S156F	1.000	388	0%	81	42%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
TMTC2	160335	genome.wustl.edu	37	12	83251132	83251132	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152588.1	+1	provisional	p.G143R	1.000	81	0%	39	43.6%	10	60%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
SLC6A15	55117	genome.wustl.edu	37	12	85279800	85279800	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182767.4	-1	validated	p.P113S	1.000	227	0%	109	33%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF
LRRIQ1	84125	genome.wustl.edu	37	12	85449750	85449750	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079910.1	+1	validated	p.Q393H	0.000	104	0%	59	18.6%	1	100%	probably_damaging(0.961)	tolerated(0.12)	deleterious(0.665)	superfamily_RNI-like
LRRIQ1	84125	genome.wustl.edu	37	12	85450835	85450835	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079910.1	+1	validated	p.I755S	0.849	92	0%	49	51%	1	100%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_RNI-like
ALX1	8092	genome.wustl.edu	37	12	85695207	85695207	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006982.2	+1	reviewed	p.R312Q	1.000	131	0%	58	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_OAR
NTS	4922	genome.wustl.edu	37	12	86272139	86272139	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006183.3	+1	reviewed	p.V51A	0.991	209	0%	96	39.6%	15	53.3%	benign(0.014)	tolerated(0.47)	neutral(0.011)	HMMPfam_Pro-NT_NN
C12orf50	160419	genome.wustl.edu	37	12	88376879	88376879	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152589.1	-1	predicted	e11+1	1.000	436	0%	90	44.4%	0	-	-	-	-	-
C12orf29	91298	genome.wustl.edu	37	12	88440599	88440599	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009894.2	+1	validated	p.K212T	1.000	359	0%	93	41.9%	25	60%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
CEP290	80184	genome.wustl.edu	37	12	88500534	88500534	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025114.3	-1	reviewed	p.K912R	1.000	687	0%	252	40.1%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
GALNT4	8693	genome.wustl.edu	37	12	89916772	89916772	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003774.3	-1	reviewed	p.P519S	1.000	172	0%	99	40.4%	42	52.3%	benign(0.222)	tolerated(0.73)	neutral(0.024)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
C12orf12	196477	genome.wustl.edu	37	12	91348305	91348305	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152638.2	-1	predicted	p.G72D	0.000	18	0%	17	35.3%	0	-	unknown(0)	tolerated(0.42)	-	NULL
LUM	4060	genome.wustl.edu	37	12	91497970	91497970	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002345.3	-1	reviewed	p.R330H	0.999	148	0%	47	21.3%	58	1.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_L domain-like
DCN	1634	genome.wustl.edu	37	12	91539849	91539849	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001920.3	-1	reviewed	p.G356R	1.000	94	0%	56	17.9%	29	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C12orf74	338809	genome.wustl.edu	37	12	93100822	93100822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037671.2	+1	validated	p.P139S	0.000	36	0%	19	52.6%	0	-	possibly_damaging(0.863)	-	-	NULL
EEA1	8411	genome.wustl.edu	37	12	93221691	93221691	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003566.3	-1	validated	p.E467	0.993	282	0%	141	39.7%	2	0%	-	-	-	NULL
MRPL42	28977	genome.wustl.edu	37	12	93863065	93863065	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014050.2	+1	reviewed	p.A2T	0.998	368	0.3%	145	16.6%	55	21.8%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
PLXNC1	10154	genome.wustl.edu	37	12	94676100	94676100	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005761.1	+1	provisional	p.E1268*	1.000	90	0%	37	48.6%	1	0%	-	-	-	superfamily_Rho_GAP,HMMPfam_Plexin_cytopl
USP44	84101	genome.wustl.edu	37	12	95911962	95911962	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042403.1	-1	validated	p.A703T	0.132	125	0%	73	45.2%	0	-	possibly_damaging(0.532)	deleterious(0)	deleterious(0.625)	NULL
CCDC38	120935	genome.wustl.edu	37	12	96272105	96272105	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182496.2	-1	validated	p.L388I	0.108	344	0%	103	45.6%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
AMDHD1	144193	genome.wustl.edu	37	12	96350665	96350665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152435.2	+1	validated	p.R171H	0.994	13	0%	13	30.8%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases
CDK17	5128	genome.wustl.edu	37	12	96674610	96674610	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002595.3	-1	reviewed	p.R504*	1.000	215	0.5%	80	57.5%	7	28.5%	-	-	-	superfamily_Protein kinase-like (PK-like)
CDK17	5128	genome.wustl.edu	37	12	96704843	96704843	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002595.3	-1	reviewed	p.R177H	1.000	205	0%	121	43%	3	33.3%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
C12orf63	374467	genome.wustl.edu	37	12	97073532	97073532	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198520.2	+1	validated	e6+2	1.000	151	0.7%	52	48.1%	0	-	-	-	-	-
LOC121456	121456	genome.wustl.edu	37	12	98848660	98848660	+	RNA	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_016411.2	-1	model	NULL	0.904	8	0.000	11	0.545	1	0%	-	-	-	-
LOC121456	121456	genome.wustl.edu	37	12	98848834	98848834	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_016411.2	-1	model	NULL	0.998	13	0%	17	47.1%	1	0%	-	-	-	-
TMPO	7112	genome.wustl.edu	37	12	98926902	98926902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003276.2	+1	reviewed	p.E289D	1.000	94	0%	32	25%	6	66.6%	benign(0.256)	deleterious(0)	deleterious(0.471)	NULL
TMPO	7112	genome.wustl.edu	37	12	98927571	98927571	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003276.2	+1	reviewed	p.Q512	0.768	119	0%	51	9.8%	13	0%	-	-	-	NULL
APAF1	317	genome.wustl.edu	37	12	99053025	99053025	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181861.1	+1	reviewed	p.R205Q	0.997	204	0%	104	32.7%	5	40%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	HMMPfam_NB-ARC,superfamily_WD40 repeat-like,superfamily_P-loop containing nucleoside triphosphate hydrolases
APAF1	317	genome.wustl.edu	37	12	99126246	99126246	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181861.1	+1	reviewed	p.G1217*	1.000	352	0%	146	35.6%	8	62.5%	-	-	-	superfamily_WD40 repeat-like
ANKS1B	56899	genome.wustl.edu	37	12	99139622	99139622	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181670.2	-1	validated	p.I476	1.000	69	0%	52	46.2%	1	100%	-	-	-	NULL
ANKS1B	56899	genome.wustl.edu	37	12	99192773	99192773	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152788.3	-1	validated	p.S1069Y	1.000	267	0%	89	43.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
ANKS1B	56899	genome.wustl.edu	37	12	100166797	100166797	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152788.3	-1	validated	p.S344L	1.000	479	0%	202	45.5%	0	-	probably_damaging(0.988)	deleterious(0.05)	deleterious(0.783)	NULL
SLC17A8	246213	genome.wustl.edu	37	12	100796206	100796206	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139319.2	+1	reviewed	p.K284N	0.970	304	0%	151	47%	0	-	unknown(0)	tolerated(0.12)	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
NR1H4	9971	genome.wustl.edu	37	12	100887150	100887150	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005123.2	+1	provisional	p.D17Y	0.979	339	0%	80	40%	0	-	possibly_damaging(0.586)	deleterious(0)	deleterious(0.647)	NULL
GAS2L3	283431	genome.wustl.edu	37	12	101018313	101018313	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174942.1	+1	provisional	p.K577R	0.000	96	0%	47	42.6%	2	50%	benign(0.017)	tolerated(0.06)	neutral(0.323)	NULL
ANO4	121601	genome.wustl.edu	37	12	101491440	101491440	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178826.3	+1	validated	p.H586R	1.000	277	0%	87	40.2%	0	-	benign(0)	tolerated(0.53)	neutral(0.007)	NULL
ANO4	121601	genome.wustl.edu	37	12	101505475	101505475	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178826.3	+1	validated	p.E778*	1.000	184	0%	64	43.8%	1	0%	-	-	-	HMMPfam_DUF590
ANO4	121601	genome.wustl.edu	37	12	101510498	101510498	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178826.3	+1	validated	p.R796Q	0.989	198	0%	93	40.9%	2	0%	benign(0.001)	deleterious(0.04)	neutral(0.349)	HMMPfam_DUF590
SYCP3	50511	genome.wustl.edu	37	12	102125434	102125434	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153694.4	-1	reviewed	p.R155Q	1.000	227	0%	71	50.7%	0	-	possibly_damaging(0.925)	tolerated(0.46)	neutral(0.386)	HMMPfam_Cor1
GNPTAB	79158	genome.wustl.edu	37	12	102147161	102147161	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024312.4	-1	reviewed	p.E1197D	1.000	178	0%	85	52.9%	29	41.3%	possibly_damaging(0.719)	tolerated(0.45)	neutral(0.273)	NULL
DRAM1	55332	genome.wustl.edu	37	12	102313971	102313971	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018370.2	+1	reviewed	p.D222Y	0.998	706	0%	234	37.6%	8	37.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Frag1
CCDC53	51019	genome.wustl.edu	37	12	102455121	102455121	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016053.2	-1	validated	p.P19S	1.000	222	0%	123	40.7%	23	56.5%	probably_damaging(0.954)	tolerated(0.16)	neutral(0.457)	NULL
NUP37	79023	genome.wustl.edu	37	12	102468795	102468795	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024057.2	-1	provisional	p.H284R	1.000	158	0%	49	42.9%	55	47.2%	unknown(0)	deleterious(0)	-	superfamily_WD40 repeat-like
PARPBP	55010	genome.wustl.edu	37	12	102542129	102542129	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017915.2	+1	predicted	p.R11K	0.291	288	0%	112	39.3%	11	36.3%	benign(0.004)	tolerated(0.76)	neutral(0.001)	NULL
PAH	5053	genome.wustl.edu	37	12	103245488	103245488	+	Missense_Mutation	SNP	G	G	A	rs62642945		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000307000	-1	known	p.R297C	1.000	135	0%	57	38.6%	0	-	possibly_damaging(0.939)	deleterious(0)	deleterious(0.829)	HMMPfam_Biopterin_H,superfamily_Aaa_hydroxylase
STAB2	55576	genome.wustl.edu	37	12	104142892	104142892	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017564.9	+1	reviewed	p.N2132	0.905	8	0.000	14	0.571	0	-	-	-	-	HMMSmart_EGF,superfamily_SSF57196
HCFC2	29915	genome.wustl.edu	37	12	104461792	104461792	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013320.2	+1	reviewed	p.R127Q	1.000	340	0%	223	22.4%	7	42.8%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_2
EID3	493861	genome.wustl.edu	37	12	104698629	104698629	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008394.1	+1	provisional	p.V306A	0.687	242	0%	129	41.9%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Nse4
TXNRD1	7296	genome.wustl.edu	37	12	104721449	104721449	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000429002	+1	known	p.K518N	1.000	94	0%	80	18.8%	31	29%	possibly_damaging(0.718)	tolerated(0.27)	neutral(0.293)	NULL
SLC41A2	84102	genome.wustl.edu	37	12	105322299	105322299	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032148.3	-1	validated	p.N3D	1.000	61	0%	24	33.3%	8	87.5%	benign(0.308)	tolerated(0.16)	neutral(0.155)	NULL
ALDH1L2	160428	genome.wustl.edu	37	12	105428095	105428095	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034173.3	-1	reviewed	p.E743K	1.000	103	0%	36	36.1%	3	66.6%	benign(0.008)	tolerated(0.12)	neutral(0.261)	HMMPfam_Aldedh,superfamily_ALDH-like
ALDH1L2	160428	genome.wustl.edu	37	12	105451902	105451902	+	Silent	SNP	G	G	A	rs139997614	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034173.3	-1	reviewed	p.V412	0.117	261	0%	106	44.3%	2	100%	-	-	-	NULL
KIAA1033	23325	genome.wustl.edu	37	12	105534820	105534820	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015275.1	+1	validated	p.Q568	0.992	253	0%	139	56.1%	2	50%	-	-	-	NULL
KIAA1033	23325	genome.wustl.edu	37	12	105536271	105536271	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015275.1	+1	validated	p.R610*	1.000	294	0%	149	34.9%	1	0%	-	-	-	NULL
KIAA1033	23325	genome.wustl.edu	37	12	105540892	105540892	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015275.1	+1	validated	p.R828*	1.000	290	0%	96	43.8%	2	0%	-	-	-	NULL
APPL2	55198	genome.wustl.edu	37	12	105569833	105569833	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018171.3	-1	validated	p.E614*	1.000	343	0%	106	42.5%	25	56%	-	-	-	superfamily_SSF50729
APPL2	55198	genome.wustl.edu	37	12	105591646	105591646	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018171.3	-1	validated	p.V317M	1.000	70	1.4%	47	51.1%	23	52.1%	probably_damaging(0.99)	tolerated(0.05)	deleterious(0.787)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
NUAK1	9891	genome.wustl.edu	37	12	106477662	106477662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014840.2	-1	validated	p.D187N	1.000	99	0%	63	39.7%	3	66.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
NUAK1	9891	genome.wustl.edu	37	12	106480586	106480586	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014840.2	-1	validated	p.R147W	1.000	53	0%	36	50%	5	20%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
LOC100130905	100130905	genome.wustl.edu	37	12	106633423	106633423	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001715433.1	+1	model	p.R161*	0.000	7	0.000	13	0.385	126	39.6%	-	-	-	NULL
TCP11L2	255394	genome.wustl.edu	37	12	106717377	106717377	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152772.1	+1	provisional	p.V242A	1.000	65	0%	31	12.9%	8	12.5%	possibly_damaging(0.832)	deleterious(0)	deleterious(0.762)	HMMPfam_Tcp11
RFX4	5992	genome.wustl.edu	37	12	107048039	107048039	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213594.1	+1	reviewed	p.V75	0.979	89	0%	50	40%	0	-	-	-	-	HMMPfam_RFX_DNA_binding,superfamily_SSF46785
RFX4	5992	genome.wustl.edu	37	12	107080780	107080780	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213594.1	+1	reviewed	p.V166M	1.000	108	0%	65	46.2%	0	-	probably_damaging(0.997)	tolerated(0.11)	deleterious(0.738)	NULL
RIC8B	55188	genome.wustl.edu	37	12	107245259	107245259	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018157.2	+1	validated	p.R398Q	1.000	145	0%	74	45.9%	15	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_ARM-type_fold,HMMPfam_Ric8
MTERFD3	80298	genome.wustl.edu	37	12	107371512	107371512	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033050.1	-1	validated	p.P327	1.000	395	0%	203	38.9%	15	40%	-	-	-	HMMPfam_mTERF
MTERFD3	80298	genome.wustl.edu	37	12	107371730	107371730	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033050.1	-1	validated	p.L255I	1.000	137	0%	68	42.6%	8	50%	benign(0.003)	tolerated(0.88)	-	HMMPfam_mTERF
MTERFD3	80298	genome.wustl.edu	37	12	107372326	107372326	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033050.1	-1	validated	p.S56*	0.988	462	0%	222	42.8%	6	16.6%	-	-	-	HMMPfam_mTERF
CRY1	1407	genome.wustl.edu	37	12	107393731	107393731	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004075.3	-1	validated	p.L272I	1.000	156	0%	76	43.4%	16	62.5%	benign(0.269)	tolerated(0.48)	neutral(0.039)	HMMPfam_FAD_binding_7,superfamily_Cryptochrome/photolyase FAD-binding domain
BTBD11	121551	genome.wustl.edu	37	12	107914389	107914389	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001018072.1	+1	validated	p.R421C	1.000	15	0%	26	61.5%	1	100%	probably_damaging(0.997)	tolerated(1)	neutral(0.466)	NULL
BTBD11	121551	genome.wustl.edu	37	12	108013884	108013884	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001018072.1	+1	validated	p.T858	0.523	101	0%	74	41.9%	0	-	-	-	-	NULL
PWP1	11137	genome.wustl.edu	37	12	108105983	108105983	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007062.1	+1	provisional	p.P498T	0.118	210	0%	61	34.4%	46	50%	benign(0)	deleterious(0)	neutral(0.445)	NULL
PRDM4	11108	genome.wustl.edu	37	12	108128014	108128014	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012406.3	-1	reviewed	p.A793	0.000	243	0%	112	40.2%	13	46.1%	-	-	-	NULL
PRDM4	11108	genome.wustl.edu	37	12	108145395	108145395	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012406.3	-1	reviewed	p.N308S	1.000	71	0%	50	40%	23	47.8%	benign(0.001)	tolerated(0.17)	neutral(0.059)	NULL
PRDM4	11108	genome.wustl.edu	37	12	108150609	108150609	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012406.3	-1	reviewed	p.G49C	1.000	20	0%	24	41.7%	25	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CMKLR1	1240	genome.wustl.edu	37	12	108686453	108686453	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142343.1	-1	validated	p.I96T	0.991	78	0%	60	30%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FICD	11153	genome.wustl.edu	37	12	108912396	108912396	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007076.2	+1	validated	p.E174A	1.000	27	0%	27	40.7%	10	50%	benign(0)	tolerated(0.13)	neutral(0.253)	superfamily_SSF48452
CORO1C	23603	genome.wustl.edu	37	12	109046051	109046051	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014325.2	-1	reviewed	p.A333V	1.000	153	0%	109	43.1%	62	46.7%	probably_damaging(1)	tolerated(0.81)	deleterious(0.500)	HMMPfam_DUF1900
CORO1C	23603	genome.wustl.edu	37	12	109055882	109055882	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014325.2	-1	reviewed	p.V124A	1.000	75	0%	56	44.6%	73	49.3%	probably_damaging(0.987)	tolerated(0.06)	deleterious(0.759)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
SSH1	54434	genome.wustl.edu	37	12	109182812	109182812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018984.3	-1	validated	p.P701L	0.000	33	0%	32	37.5%	9	33.3%	benign(0)	tolerated(0.86)	neutral(0.001)	NULL
SSH1	54434	genome.wustl.edu	37	12	109198847	109198847	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000360239	-1	known	p.S17L	0.999	233	0%	103	28.2%	4	75%	benign(0.001)	deleterious(0)	neutral(0.445)	HMMSmart_DSPc
DAO	1610	genome.wustl.edu	37	12	109290788	109290788	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001917.4	+1	reviewed	p.A207T	0.992	76	0%	47	40.4%	0	-	possibly_damaging(0.817)	deleterious(0)	deleterious(0.754)	HMMPfam_DAO,superfamily_Nucleotide-binding domain,superfamily_FAD-linked reductases C-terminal domain
ACACB	32	genome.wustl.edu	37	12	109671823	109671823	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001093.3	+1	reviewed	p.P1440	0.000	79	0%	60	46.7%	1	100%	-	-	-	HMMPfam_ACC_central
MYO1H	283446	genome.wustl.edu	37	12	109879449	109879449	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101421.3	+1	provisional	p.I850	0.768	215	0%	103	45.6%	0	-	-	-	-	HMMPfam_Myosin_TH1
MYO1H	283446	genome.wustl.edu	37	12	109881329	109881329	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101421.3	+1	provisional	p.P894L	0.990	55	0%	32	37.5%	0	-	possibly_damaging(0.892)	tolerated(0.53)	neutral(0.359)	HMMPfam_Myosin_TH1
MYO1H	283446	genome.wustl.edu	37	12	109882290	109882290	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101421.3	+1	provisional	p.V977	0.971	256	0%	138	42%	1	0%	-	-	-	HMMPfam_Myosin_TH1
KCTD10	83892	genome.wustl.edu	37	12	109895865	109895865	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031954.3	-1	provisional	p.P136S	1.000	275	0.4%	147	40.8%	16	43.7%	possibly_damaging(0.892)	deleterious(0.04)	deleterious(0.700)	NULL
UBE3B	89910	genome.wustl.edu	37	12	109958988	109958988	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130466.2	+1	reviewed	p.H704	0.951	76	0%	55	54.5%	18	38.8%	-	-	-	HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
UBE3B	89910	genome.wustl.edu	37	12	109971273	109971273	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130466.2	+1	reviewed	p.F975	1.000	19	0%	28	50%	8	50%	-	-	-	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
MVK	4598	genome.wustl.edu	37	12	110024570	110024570	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000431.2	+1	reviewed	p.R215*	0.966	70	0%	53	47.2%	10	10%	-	-	-	superfamily_Ribosomal protein S5 domain 2-like
C12orf34	84915	genome.wustl.edu	37	12	110205823	110205823	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032829.2	+1	validated	p.A30V	0.953	10	0.000	8	0.500	7	57.1%	benign(0.001)	deleterious(0.04)	neutral(0.349)	NULL
TRPV4	59341	genome.wustl.edu	37	12	110232160	110232160	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021625.4	-1	reviewed	p.A489T	1.000	14	0%	18	50%	18	33.3%	probably_damaging(0.995)	deleterious(0.04)	deleterious(0.806)	NULL
TRPV4	59341	genome.wustl.edu	37	12	110240847	110240847	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021625.4	-1	reviewed	p.G221S	0.999	17	0%	16	50%	23	56.5%	probably_damaging(0.995)	tolerated(0.08)	deleterious(0.758)	superfamily_Ankyrin repeat
TCHP	84260	genome.wustl.edu	37	12	110340896	110340896	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143852.1	+1	validated	p.R22Q	0.736	15	0%	16	50%	9	66.6%	possibly_damaging(0.829)	deleterious(0)	deleterious(0.759)	NULL
ANKRD13A	88455	genome.wustl.edu	37	12	110456189	110456189	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033121.1	+1	validated	p.R147H	1.000	186	0%	116	51.7%	5	40%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
ATP2A2	488	genome.wustl.edu	37	12	110777126	110777126	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170665.3	+1	reviewed	p.F487C	1.000	266	0%	146	36.3%	126	54.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hydrolase,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M
ANAPC7	51434	genome.wustl.edu	37	12	110819628	110819628	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000452721	-1	known	p.E381*	1.000	110	0%	61	50.8%	35	42.8%	possibly_damaging(0.702)	deleterious(0.01)	deleterious(0.658)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
ANAPC7	51434	genome.wustl.edu	37	12	110834074	110834074	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016238.2	-1	reviewed	p.S129R	0.981	227	0.4%	111	42.3%	13	69.2%	benign(0.264)	tolerated(0.55)	neutral(0.035)	superfamily_TPR-like
VPS29	51699	genome.wustl.edu	37	12	110930881	110930881	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_057180.1	-1	reviewed	p.H121	1.000	271	0%	118	47.5%	101	34.6%	-	-	-	HMMPfam_Metallophos,superfamily_SSF56300
CCDC63	160762	genome.wustl.edu	37	12	111321848	111321848	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152591.1	+1	provisional	p.K290Q	0.777	160	0%	84	33.3%	0	-	possibly_damaging(0.767)	tolerated(0.23)	neutral(0.326)	NULL
ENSG00000238168	0	genome.wustl.edu	37	12	112019424	112019424	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000423386	+1	known	p.S74	0.786	23	0%	16	37.5%	0	-	-	-	-	HMMPfam_CD225
MAPKAPK5	8550	genome.wustl.edu	37	12	112323839	112323839	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139078.1	+1	reviewed	p.K323T	1.000	121	0%	69	42%	51	43.1%	possibly_damaging(0.898)	tolerated(0.05)	deleterious(0.700)	superfamily_Protein kinase-like (PK-like)
NAA25	80018	genome.wustl.edu	37	12	112492313	112492313	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024953.3	-1	reviewed	p.P503S	1.000	95	0%	52	26.9%	6	50%	benign(0.231)	tolerated(0.22)	neutral(0.065)	HMMPfam_NatB_MDM20,superfamily_TPR-like
NAA25	80018	genome.wustl.edu	37	12	112528641	112528641	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024953.3	-1	reviewed	p.T58A	1.000	86	1.2%	46	32.6%	2	100%	benign(0.06)	tolerated(0.24)	neutral(0.041)	superfamily_TPR-like
TRAFD1	10906	genome.wustl.edu	37	12	112578747	112578747	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143906.1	+1	validated	p.R121H	1.000	112	0%	67	40.3%	27	40.7%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	NULL
C12orf51	283450	genome.wustl.edu	37	12	112616818	112616818	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109662.2	-1	validated	p.E3338	1.000	19	0%	29	31%	10	40%	-	-	-	NULL
C12orf51	283450	genome.wustl.edu	37	12	112622425	112622425	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109662.2	-1	validated	p.E3027K	0.996	40	0%	73	13.7%	12	8.3%	benign(0.301)	-	-	NULL
C12orf51	283450	genome.wustl.edu	37	12	112645713	112645713	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109662.2	-1	validated	p.S2277L	1.000	110	0%	59	44.1%	5	60%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
C12orf51	283450	genome.wustl.edu	37	12	112669480	112669480	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109662.2	-1	validated	p.A1591T	1.000	44	0%	24	50%	1	0%	probably_damaging(0.98)	-	-	NULL
C12orf51	283450	genome.wustl.edu	37	12	112674831	112674831	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109662.2	-1	validated	p.R1366*	1.000	15	0%	10	50%	8	25%	-	-	-	NULL
PTPN11	5781	genome.wustl.edu	37	12	112892383	112892383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002834.3	+1	reviewed	p.V181I	1.000	232	0%	102	44.1%	42	45.2%	benign(0.007)	tolerated(0.54)	neutral(0.007)	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
PTPN11	5781	genome.wustl.edu	37	12	112926254	112926254	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002834.3	+1	reviewed	p.I463L	1.000	169	0%	111	35.1%	57	45.6%	possibly_damaging(0.653)	deleterious(0.02)	deleterious(0.613)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II
OAS2	4939	genome.wustl.edu	37	12	113440811	113440811	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016817.2	+1	reviewed	p.C361*	0.123	144	0%	76	38.2%	6	0%	-	-	-	superfamily_Nucleotidyltransferase
DTX1	1840	genome.wustl.edu	37	12	113532909	113532909	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004416.2	+1	reviewed	p.P483	0.068	19	0%	20	30%	2	0%	-	-	-	superfamily_SSF57850
RASAL1	8437	genome.wustl.edu	37	12	113552692	113552692	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004658.1	-1	reviewed	p.E365G	1.000	21	0%	25	40%	8	62.5%	possibly_damaging(0.796)	tolerated(0.38)	neutral(0.317)	HMMPfam_RasGAP,HMMSmart_SM00323,superfamily_GTPase activation domain GAP
RASAL1	8437	genome.wustl.edu	37	12	113554900	113554900	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004658.1	-1	reviewed	p.P237T	0.987	33	0%	27	18.5%	5	60%	possibly_damaging(0.913)	tolerated(0.53)	neutral(0.372)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
DDX54	79039	genome.wustl.edu	37	12	113616989	113616989	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111322.1	-1	reviewed	p.T175A	1.000	17	0%	21	57.1%	87	51.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
TPCN1	53373	genome.wustl.edu	37	12	113727975	113727975	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143819.1	+1	validated	p.T685	0.000	101	0%	80	46.3%	20	40%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SDS	10993	genome.wustl.edu	37	12	113831740	113831740	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006843.2	-1	reviewed	p.V245	0.000	24	0%	22	54.5%	0	-	-	-	-	HMMPfam_PALP,superfamily_PyrdxlP-dep_enz_bsu
LHX5	64211	genome.wustl.edu	37	12	113906192	113906192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022363.2	-1	reviewed	p.R139C	1.000	21	0%	39	41%	0	-	probably_damaging(0.965)	tolerated(0.05)	deleterious(0.752)	NULL
RBM19	9904	genome.wustl.edu	37	12	114383708	114383708	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016196.3	-1	reviewed	p.L517	0.995	41	0%	47	10.6%	12	8.3%	-	-	-	NULL
RBM19	9904	genome.wustl.edu	37	12	114384264	114384264	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016196.3	-1	reviewed	p.V475G	0.455	48	0%	38	44.7%	15	60%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMSmart_SM00360,HMMSmart_SM00361,superfamily_RNA-binding domain RBD
TBX3	6926	genome.wustl.edu	37	12	115114128	115114128	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016569.3	-1	reviewed	p.S363	0.054	58	0%	41	41.5%	7	85.7%	-	-	-	NULL
FBXO21	23014	genome.wustl.edu	37	12	117627047	117627047	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033624.2	-1	reviewed	p.R120	1.000	151	0%	124	41.9%	21	23.8%	-	-	-	superfamily_F-box domain
NOS1	4842	genome.wustl.edu	37	12	117672461	117672461	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000620.2	-1	reviewed	p.L1048	0.709	12	0%	13	61.5%	0	-	-	-	-	HMMPfam_FAD_binding_1,superfamily_Riboflavin synthase domain-like
NOS1	4842	genome.wustl.edu	37	12	117672548	117672548	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000620.2	-1	reviewed	p.F1019	0.991	21	0.000	9	0.444	0	-	-	-	-	HMMPfam_FAD_binding_1,superfamily_Riboflavin synthase domain-like
KSR2	283455	genome.wustl.edu	37	12	118020137	118020137	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173598.4	-1	validated	p.P371L	0.998	43	0%	29	51.7%	0	-	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	superfamily_Cysteine-rich domain
VSIG10	54621	genome.wustl.edu	37	12	118517221	118517221	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019086.5	-1	validated	p.G285	1.000	67	0%	52	13.5%	4	0%	-	-	-	superfamily_Immunoglobulin
TAOK3	51347	genome.wustl.edu	37	12	118671522	118671522	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016281.3	-1	validated	p.G200	0.906	292	0%	103	47.6%	6	33.3%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
SUDS3	64426	genome.wustl.edu	37	12	118828932	118828932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022491.2	+1	validated	p.T121N	1.000	142	0%	78	38.5%	18	33.3%	probably_damaging(0.959)	deleterious(0.03)	deleterious(0.767)	HMMPfam_Sds3
SUDS3	64426	genome.wustl.edu	37	12	118841298	118841298	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022491.2	+1	validated	p.G260D	1.000	63	0%	26	34.6%	28	42.8%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
CCDC60	160777	genome.wustl.edu	37	12	119954454	119954454	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178499.3	+1	validated	p.R304W	0.979	107	2.8%	44	52.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
PRKAB1	5564	genome.wustl.edu	37	12	120106178	120106178	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006253.4	+1	reviewed	p.D43	1.000	9	0.000	20	0.350	13	30.7%	-	-	-	NULL
CIT	11113	genome.wustl.edu	37	12	120156569	120156569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007174.1	-1	validated	p.R1271H	1.000	48	2.1%	52	15.4%	5	0%	possibly_damaging(0.707)	tolerated(0.15)	deleterious(0.496)	NULL
GCN1L1	10985	genome.wustl.edu	37	12	120584904	120584904	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006836.1	-1	validated	p.K1633N	1.000	64	0%	51	39.2%	55	38.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HEAT,superfamily_ARM repeat
GCN1L1	10985	genome.wustl.edu	37	12	120594723	120594723	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006836.1	-1	validated	p.R1054H	1.000	20	0%	14	57.1%	24	41.6%	possibly_damaging(0.903)	deleterious(0.02)	deleterious(0.741)	superfamily_ARM repeat
GCN1L1	10985	genome.wustl.edu	37	12	120611576	120611576	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006836.1	-1	validated	p.R416Q	0.997	72	0%	53	45.3%	18	27.7%	possibly_damaging(0.782)	tolerated(0.19)	neutral(0.342)	superfamily_ARM repeat
GCN1L1	10985	genome.wustl.edu	37	12	120628113	120628113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006836.1	-1	validated	p.V37I	0.998	217	0%	112	33%	3	33.3%	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
RPLP0	6175	genome.wustl.edu	37	12	120637264	120637264	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002.3	-1	reviewed	p.C27R	1.000	45	0%	39	48.7%	2309	50.3%	possibly_damaging(0.609)	deleterious(0)	deleterious(0.655)	HMMPfam_Ribosomal_L10
PXN	5829	genome.wustl.edu	37	12	120650200	120650200	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080855.1	-1	validated	p.L565I	1.000	45	0%	49	32.7%	98	33.6%	probably_damaging(0.982)	deleterious(0.03)	deleterious(0.791)	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
POP5	51367	genome.wustl.edu	37	12	121017688	121017688	+	Nonsense_Mutation	SNP	G	G	A	rs151192790	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015918.3	-1	validated	p.R68*	1.000	146	0%	94	43.6%	32	28.1%	-	-	-	HMMPfam_RNase_P_Rpp14
CABP1	9478	genome.wustl.edu	37	12	121099017	121099017	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033677.1	+1	reviewed	p.F361	1.000	80	0%	43	20.9%	0	-	-	-	-	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
P2RX4	5025	genome.wustl.edu	37	12	121670288	121670288	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002560.2	+1	reviewed	p.F319C	1.000	18	0%	23	52.2%	29	24.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_P2X_receptor
CAMKK2	10645	genome.wustl.edu	37	12	121691198	121691198	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006549.3	-1	reviewed	p.A329T	0.999	140	0%	116	43.1%	19	31.5%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ANAPC5	51433	genome.wustl.edu	37	12	121746433	121746433	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016237.4	-1	reviewed	p.C706	1.000	64	0%	28	60.7%	147	47.6%	-	-	-	superfamily_TPR-like
ANAPC5	51433	genome.wustl.edu	37	12	121766228	121766228	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016237.4	-1	reviewed	p.M399L	1.000	103	0%	78	42.3%	124	42.7%	-	-	-	superfamily_TPR-like
TMEM120B	144404	genome.wustl.edu	37	12	122186262	122186262	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080825.2	+1	validated	p.A73	0.091	8	0.000	18	0.444	18	66.6%	-	-	-	HMMPfam_TMPIT
WDR66	144406	genome.wustl.edu	37	12	122395030	122395030	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144668.4	+1	validated	p.T529I	0.002	225	0%	135	17.8%	2	50%	benign(0.281)	tolerated(0.18)	neutral(0.142)	superfamily_WD40 repeat-like
WDR66	144406	genome.wustl.edu	37	12	122396269	122396269	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144668.4	+1	validated	p.A608T	0.754	106	0%	83	10.8%	7	0%	possibly_damaging(0.756)	tolerated(0.09)	deleterious(0.576)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
KNTC1	9735	genome.wustl.edu	37	12	123075235	123075235	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014708.4	+1	reviewed	p.L1361I	1.000	355	0%	232	45.7%	5	40%	possibly_damaging(0.603)	tolerated(0.16)	neutral(0.268)	NULL
HCAR2	338442	genome.wustl.edu	37	12	123187642	123187642	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177551.3	-1	validated	p.R63	0.999	77	0%	59	18.6%	1	0%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
HCAR2	338442	genome.wustl.edu	37	12	123187643	123187643	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177551.3	-1	validated	p.R63Q	0.998	75	0%	59	35.6%	1	0%	probably_damaging(0.965)	tolerated(0.1)	deleterious(0.694)	HMMPfam_7tm_1,superfamily_SSF81321
CCDC62	84660	genome.wustl.edu	37	12	123270314	123270314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201435.3	+1	validated	p.V149I	1.000	164	0%	103	48.5%	0	-	possibly_damaging(0.465)	tolerated(0.3)	neutral(0.181)	NULL
CCDC62	84660	genome.wustl.edu	37	12	123276620	123276620	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201435.3	+1	validated	p.R242C	1.000	150	0%	80	53.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HIP1R	9026	genome.wustl.edu	37	12	123333391	123333391	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003959.1	+1	validated	p.D117Y	0.877	18	0%	19	47.4%	17	35.2%	benign(0.359)	deleterious(0.02)	deleterious(0.497)	superfamily_ENTH_VHS,HMMPfam_ANTH,HMMSmart_ENTH
HIP1R	9026	genome.wustl.edu	37	12	123340438	123340438	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003959.1	+1	validated	p.K372	1.000	29	0%	38	52.6%	36	47.2%	-	-	-	NULL
ABCB9	23457	genome.wustl.edu	37	12	123424797	123424797	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019625.3	-1	reviewed	p.T535M	1.000	15	0.000	7	0.714	12	25%	probably_damaging(0.992)	deleterious(0.03)	deleterious(0.812)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCB9	23457	genome.wustl.edu	37	12	123433338	123433338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019625.3	-1	reviewed	p.V296I	1.000	16	0%	17	41.2%	15	66.6%	possibly_damaging(0.67)	tolerated(0.28)	neutral(0.269)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ARL6IP4	51329	genome.wustl.edu	37	12	123466037	123466037	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000392433	+1	known	p.R225H	0.000	18	0%	10	50%	5	80%	-	-	-	HMMPfam_SR-25
SBNO1	55206	genome.wustl.edu	37	12	123829963	123829963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018183.3	-1	validated	p.R130H	0.998	546	0%	361	40.4%	12	33.3%	possibly_damaging(0.742)	tolerated(0.11)	deleterious(0.544)	NULL
SNRNP35	11066	genome.wustl.edu	37	12	123950575	123950575	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_180699.2	+1	reviewed	p.R168Q	0.966	27	0%	21	52.4%	26	46.1%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
RILPL1	353116	genome.wustl.edu	37	12	123983294	123983294	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178314.3	-1	validated	p.R200W	0.994	24	0%	26	42.3%	26	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ATP6V0A2	23545	genome.wustl.edu	37	12	124209257	124209257	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012463.3	+1	reviewed	p.K117N	1.000	198	0%	77	45.5%	10	50%	possibly_damaging(0.762)	tolerated(0.51)	neutral(0.291)	HMMPfam_V_ATPase_I
ATP6V0A2	23545	genome.wustl.edu	37	12	124229211	124229211	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012463.3	+1	reviewed	p.G465D	1.000	108	0%	70	50%	10	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_V_ATPase_I
ATP6V0A2	23545	genome.wustl.edu	37	12	124233256	124233256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012463.3	+1	reviewed	p.A620V	1.000	344	0%	184	46.2%	4	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_V_ATPase_I
DNAH10	196385	genome.wustl.edu	37	12	124247079	124247079	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.E5K	1.000	17	0%	25	36%	5	80%	unknown(0)	-	-	NULL
DNAH10	196385	genome.wustl.edu	37	12	124252191	124252191	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.E24*	0.324	277	0%	139	38.8%	0	-	-	-	-	NULL
DNAH10	196385	genome.wustl.edu	37	12	124257389	124257389	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.A74	0.000	106	0%	63	47.6%	0	-	-	-	-	NULL
DNAH10	196385	genome.wustl.edu	37	12	124285846	124285846	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.Q709H	0.096	134	0%	89	47.2%	0	-	benign(0.003)	tolerated(0.15)	neutral(0.241)	HMMPfam_DHC_N1
DNAH10	196385	genome.wustl.edu	37	12	124323053	124323053	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.A1533	0.993	75	0%	39	35.9%	0	-	-	-	-	HMMPfam_DHC_N2
DNAH10	196385	genome.wustl.edu	37	12	124323098	124323098	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.E1548D	1.000	108	0%	49	42.9%	0	-	benign(0.033)	tolerated(0.61)	neutral(0.005)	HMMPfam_DHC_N2
DNAH10	196385	genome.wustl.edu	37	12	124330326	124330326	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.P1729L	0.000	79	0%	73	49.3%	0	-	benign(0.408)	deleterious(0.01)	deleterious(0.538)	NULL
DNAH10	196385	genome.wustl.edu	37	12	124352578	124352578	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.R2359	0.558	69	0%	50	48%	0	-	-	-	-	NULL
DNAH10	196385	genome.wustl.edu	37	12	124358140	124358140	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.T2489	0.020	116	0%	52	50%	0	-	-	-	-	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH10	196385	genome.wustl.edu	37	12	124377927	124377927	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.V2930A	1.000	36	0%	42	45.2%	0	-	possibly_damaging(0.929)	tolerated(0.06)	deleterious(0.699)	NULL
DNAH10	196385	genome.wustl.edu	37	12	124382368	124382368	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.V2993A	0.989	125	0.8%	84	13.1%	0	-	benign(0.091)	deleterious(0.01)	neutral(0.412)	NULL
DNAH10	196385	genome.wustl.edu	37	12	124409685	124409685	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.R3834H	1.000	248	0%	147	38.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Dynein_heavy
DNAH10	196385	genome.wustl.edu	37	12	124411191	124411191	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207437.3	+1	validated	p.Q3859*	1.000	159	0%	137	57.7%	5	40%	-	-	-	HMMPfam_Dynein_heavy
CCDC92	80212	genome.wustl.edu	37	12	124422150	124422150	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025140.1	-1	provisional	p.R151W	1.000	95	0%	106	41.5%	29	44.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZNF664	144348	genome.wustl.edu	37	12	124496843	124496843	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152437.1	+1	provisional	p.R51K	1.000	198	0%	82	40.2%	26	53.8%	benign(0.025)	tolerated(0.12)	neutral(0.262)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SCARB1	949	genome.wustl.edu	37	12	125284671	125284671	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005505.4	-1	validated	p.P376L	1.000	72	0%	49	46.9%	39	84.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CD36
SCARB1	949	genome.wustl.edu	37	12	125298796	125298796	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005505.4	-1	validated	p.Y194*	0.611	59	1.7%	55	30.9%	27	14.8%	-	-	-	HMMPfam_CD36
SCARB1	949	genome.wustl.edu	37	12	125298947	125298947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005505.4	-1	validated	p.A144V	0.141	24	0%	38	28.9%	26	7.6%	possibly_damaging(0.575)	tolerated(0.14)	neutral(0.447)	HMMPfam_CD36
LOC100288312	100288312	genome.wustl.edu	37	12	125396863	125396863	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343222.1	+1	model	p.L249F	1.000	284	0%	200	27.5%	2329	13.5%	-	-	-	NULL
AACS	65985	genome.wustl.edu	37	12	125561100	125561100	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023928.3	+1	validated	p.Y101H	1.000	118	0%	81	30.9%	24	58.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_Acetyl-CoA synthetase-like
TMEM132B	114795	genome.wustl.edu	37	12	126135254	126135254	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052907.2	+1	provisional	p.D552Y	1.000	27	0%	23	26.1%	0	-	benign(0.408)	deleterious(0.02)	deleterious(0.515)	NULL
TMEM132C	92293	genome.wustl.edu	37	12	129100821	129100821	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136103.2	+1	provisional	p.A304T	0.021	66	0%	48	31.2%	0	-	benign(0.001)	tolerated(0.14)	neutral(0.249)	NULL
TMEM132C	92293	genome.wustl.edu	37	12	129178397	129178397	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136103.2	+1	provisional	p.I379	1.000	76	0%	31	74.2%	1	0%	-	-	-	NULL
TMEM132C	92293	genome.wustl.edu	37	12	129180507	129180507	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136103.2	+1	provisional	p.P484	0.044	26	0%	25	52%	0	-	-	-	-	NULL
SLC15A4	121260	genome.wustl.edu	37	12	129278782	129278782	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145648.3	-1	validated	p.R565*	0.958	122	0%	55	49.1%	19	47.3%	-	-	-	NULL
SLC15A4	121260	genome.wustl.edu	37	12	129285463	129285463	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145648.3	-1	validated	p.S450	0.001	123	0%	80	21.2%	14	14.2%	-	-	-	HMMPfam_PTR2,superfamily_MFS general substrate transporter
GLT1D1	144423	genome.wustl.edu	37	12	129429901	129429901	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144669.1	+1	provisional	p.A136T	0.062	124	0%	73	43.8%	0	-	possibly_damaging(0.815)	tolerated(0.57)	neutral(0.314)	superfamily_SSF53756
TMEM132D	121256	genome.wustl.edu	37	12	129558525	129558525	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133448.2	-1	validated	p.I1065	0.000	183	0%	127	39.4%	0	-	-	-	-	NULL
TMEM132D	121256	genome.wustl.edu	37	12	129559215	129559215	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133448.2	-1	validated	p.G835	0.000	133	0%	111	42.3%	0	-	-	-	-	NULL
TMEM132D	121256	genome.wustl.edu	37	12	130184915	130184915	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133448.2	-1	validated	p.D136	0.000	90	0%	51	35.3%	0	-	-	-	-	NULL
FZD10	11211	genome.wustl.edu	37	12	130648362	130648362	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007197.2	+1	reviewed	p.R292Q	1.000	13	0%	26	19.2%	6	0%	possibly_damaging(0.549)	tolerated(0.26)	neutral(0.221)	HMMPfam_Frizzled
PIWIL1	9271	genome.wustl.edu	37	12	130833783	130833783	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004764.3	+1	reviewed	e7-1	1.000	194	0%	88	17%	0	-	-	-	-	-
PIWIL1	9271	genome.wustl.edu	37	12	130847361	130847361	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004764.3	+1	reviewed	p.G674E	1.000	219	0.5%	104	39.4%	0	-	benign(0.364)	tolerated(0.48)	neutral(0.127)	HMMPfam_Piwi,superfamily_Ribonuclease H-like
RIMBP2	23504	genome.wustl.edu	37	12	130935764	130935764	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015347.4	-1	validated	p.S143	1.000	17	0%	21	47.6%	0	-	-	-	-	NULL
STX2	2054	genome.wustl.edu	37	12	131297503	131297503	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194356.1	-1	reviewed	p.K93N	0.476	735	0.1%	324	42%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Syntaxin,HMMSmart_SM00503,superfamily_t-snare proteins
GPR133	283383	genome.wustl.edu	37	12	131471825	131471825	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198827.3	+1	validated	p.D226N	1.000	87	0%	63	50.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Concanavalin A-like lectins/glucanases
SFSWAP	6433	genome.wustl.edu	37	12	132241120	132241120	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004592.2	+1	reviewed	p.R551W	0.356	14	0%	12	41.7%	22	45.4%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SFSWAP	6433	genome.wustl.edu	37	12	132250770	132250770	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004592.2	+1	reviewed	p.A687T	1.000	174	0%	93	36.6%	20	30%	unknown(0)	deleterious(0.01)	-	NULL
PUS1	80324	genome.wustl.edu	37	12	132428117	132428117	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025215.5	+1	reviewed	p.G424R	0.407	20	0%	28	42.9%	57	52.6%	probably_damaging(0.959)	deleterious(0.02)	deleterious(0.786)	NULL
EP400	57634	genome.wustl.edu	37	12	132446191	132446191	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015409.3	+1	validated	p.G343R	0.284	123	0%	91	35.2%	6	33.3%	unknown(0)	-	-	NULL
EP400	57634	genome.wustl.edu	37	12	132539724	132539724	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015409.3	+1	validated	p.A2618T	0.988	18	0%	30	53.3%	8	62.5%	probably_damaging(0.998)	-	-	NULL
EP400NL	347918	genome.wustl.edu	37	12	132589080	132589080	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000376625	+1	known	p.S172I	1.000	21	0%	27	25.9%	4	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
DDX51	317781	genome.wustl.edu	37	12	132626884	132626884	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175066.3	-1	validated	p.L252I	1.000	14	0%	16	43.8%	15	46.6%	benign(0.076)	tolerated(1)	neutral(0.005)	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
NOC4L	79050	genome.wustl.edu	37	12	132635895	132635895	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024078.1	+1	provisional	p.D352G	0.987	19	0%	24	50%	74	43.2%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	HMMPfam_CBF
GALNT9	50614	genome.wustl.edu	37	12	132839143	132839143	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000328957	-1	known	p.A163V	1.000	11	0%	10	40%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
POLE	5426	genome.wustl.edu	37	12	133201524	133201524	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006231.2	-1	validated	p.C2238	0.981	27	0%	26	61.5%	54	51.8%	-	-	-	NULL
POLE	5426	genome.wustl.edu	37	12	133214643	133214643	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006231.2	-1	validated	p.R1879C	0.962	52	1.9%	58	25.9%	42	38%	possibly_damaging(0.936)	tolerated(0.05)	deleterious(0.727)	HMMPfam_DUF1744
POLE	5426	genome.wustl.edu	37	12	133219469	133219469	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006231.2	-1	validated	p.V1555	0.997	50	0%	46	50%	37	62.1%	-	-	-	HMMPfam_DUF1744
POLE	5426	genome.wustl.edu	37	12	133225574	133225574	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006231.2	-1	validated	p.R1364C	1.000	16	0%	12	83.3%	39	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
POLE	5426	genome.wustl.edu	37	12	133238265	133238265	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006231.2	-1	validated	p.G904	1.000	80	0%	50	26%	10	60%	-	-	-	HMMPfam_DNA_pol_B,superfamily_SSF56672
POLE	5426	genome.wustl.edu	37	12	133250289	133250289	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006231.2	-1	validated	p.V411L	1.000	25	0%	20	60%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DNA_pol_B_exo,HMMSmart_POLBc,superfamily_RNaseH_fold
ANKLE2	23141	genome.wustl.edu	37	12	133324765	133324765	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015114.1	-1	validated	p.R334W	1.000	114	0%	75	12%	41	9.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Ankyrin repeat
GOLGA3	2802	genome.wustl.edu	37	12	133372630	133372630	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005895.3	-1	reviewed	p.G759	0.057	27	0%	22	27.3%	35	14.2%	-	-	-	NULL
GOLGA3	2802	genome.wustl.edu	37	12	133385084	133385084	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005895.3	-1	reviewed	p.L191I	1.000	76	2.6%	55	12.7%	26	23%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
CHFR	55743	genome.wustl.edu	37	12	133425242	133425242	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018223.2	-1	validated	p.L492M	1.000	14	0%	17	64.7%	19	52.6%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	NULL
ZNF10	7556	genome.wustl.edu	37	12	133732377	133732377	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015394.4	+1	reviewed	p.R182I	0.003	181	0%	70	37.1%	3	33.3%	possibly_damaging(0.449)	tolerated(0.08)	neutral(0.447)	NULL
ZNF268	10795	genome.wustl.edu	37	12	133758594	133758594	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003415.2	+1	validated	p.R4M	0.038	126	0%	81	24.7%	3	0%	possibly_damaging(0.776)	-	-	NULL
ZNF268	10795	genome.wustl.edu	37	12	133780453	133780453	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003415.2	+1	validated	p.R727	0.001	122	0%	41	43.9%	10	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000187721	0	genome.wustl.edu	37	13	19600470	19600470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000340284	-1	known	p.D112N	0.970	35	0%	15	86.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GTF2I
TUBA3C	7278	genome.wustl.edu	37	13	19753621	19753621	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006001.1	-1	reviewed	p.G29E	1.000	147	0%	103	45.6%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like
TPTE2	93492	genome.wustl.edu	37	13	20024448	20024448	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199254.2	-1	validated	p.R280M	1.000	479	0%	138	45.7%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_(Phosphotyrosine protein) phosphatases II
TPTE2	93492	genome.wustl.edu	37	13	20048166	20048166	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199254.2	-1	validated	p.D94N	0.004	171	0%	87	33.3%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	superfamily_Voltage-gated potassium channels
PSPC1	55269	genome.wustl.edu	37	13	20304406	20304406	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042414.1	-1	validated	p.E377D	0.978	245	0%	150	18%	107	27.1%	benign(0.001)	tolerated(0.07)	neutral(0.319)	NULL
ZMYM5	9205	genome.wustl.edu	37	13	20398871	20398871	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142684.1	-1	validated	p.D586Y	1.000	177	0%	90	47.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZMYM2	7750	genome.wustl.edu	37	13	20567420	20567420	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003453.2	+1	validated	p.P70S	1.000	175	0%	96	45.8%	10	40%	benign(0.003)	tolerated(0.27)	neutral(0.034)	NULL
ZMYM2	7750	genome.wustl.edu	37	13	20601372	20601372	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003453.2	+1	validated	p.R589*	1.000	426	0%	209	45%	13	15.3%	-	-	-	HMMPfam_zf-FCS,HMMSmart_TRASH
CRYL1	51084	genome.wustl.edu	37	13	20978842	20978842	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015974.2	-1	reviewed	p.K260Q	0.962	160	0.6%	102	42.2%	32	53.1%	benign(0.012)	tolerated(0.3)	neutral(0.029)	HMMPfam_3HCDH,superfamily_6-phosphogluconate dehydrogenase C-terminal domain-like
IFT88	8100	genome.wustl.edu	37	13	21172880	21172880	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175605.3	+1	reviewed	p.F238L	1.000	262	0%	121	48.8%	11	27.2%	possibly_damaging(0.468)	deleterious(0.01)	deleterious(0.559)	HMMSmart_SM00028,superfamily_TPR-like
N6AMT2	221143	genome.wustl.edu	37	13	21331636	21331636	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174928.1	-1	provisional	p.G34	0.008	357	0.3%	221	41.6%	6	0%	-	-	-	NULL
XPO4	64328	genome.wustl.edu	37	13	21374323	21374323	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022459.4	-1	validated	p.L707F	1.000	165	0%	69	47.8%	10	40%	probably_damaging(0.981)	tolerated(0.39)	neutral(0.442)	superfamily_ARM-type_fold
LATS2	26524	genome.wustl.edu	37	13	21555749	21555749	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014572.2	-1	reviewed	p.L841F	1.000	18	0%	18	38.9%	7	57.1%	benign(0.096)	tolerated(0.76)	neutral(0.008)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
LATS2	26524	genome.wustl.edu	37	13	21557528	21557528	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014572.2	-1	reviewed	p.A773T	1.000	54	0%	50	42%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
LATS2	26524	genome.wustl.edu	37	13	21557768	21557768	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014572.2	-1	reviewed	p.L693M	0.958	70	0%	45	11.1%	11	18.1%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
LATS2	26524	genome.wustl.edu	37	13	21562246	21562246	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014572.2	-1	reviewed	p.R558H	0.979	95	0%	88	50%	8	25%	benign(0)	tolerated(0.2)	neutral(0.049)	NULL
SACS	26278	genome.wustl.edu	37	13	23904403	23904403	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014363.4	-1	reviewed	p.Y4538H	0.997	324	0%	139	46%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00748,superfamily_Nucleotidyltransferase substrate binding subunit/domain
SACS	26278	genome.wustl.edu	37	13	23909298	23909298	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014363.4	-1	reviewed	p.R2906Q	0.991	229	0%	93	44.1%	5	0%	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	NULL
SACS	26278	genome.wustl.edu	37	13	23912295	23912295	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014363.4	-1	reviewed	p.R1907Q	0.958	292	0%	123	43.9%	3	33.3%	benign(0.011)	tolerated(0.39)	neutral(0.017)	NULL
SACS	26278	genome.wustl.edu	37	13	23915259	23915259	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014363.4	-1	reviewed	p.R919I	1.000	360	0%	135	43.7%	0	-	benign(0.038)	tolerated(0.11)	neutral(0.274)	NULL
C1QTNF9B	387911	genome.wustl.edu	37	13	24468289	24468289	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007537.1	-1	provisional	p.K73T	1.000	189	0%	156	41%	0	-	possibly_damaging(0.919)	tolerated(0.27)	neutral(0.403)	HMMPfam_Collagen
C1QTNF9	338872	genome.wustl.edu	37	13	24893007	24893007	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178540.3	+1	validated	p.K73T	1.000	709	0.1%	476	15.1%	0	-	probably_damaging(0.961)	tolerated(0.15)	deleterious(0.645)	HMMPfam_Collagen
PARP4	143	genome.wustl.edu	37	13	25005580	25005580	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006437.3	-1	reviewed	p.L1594R	0.026	385	0%	138	21%	13	23%	possibly_damaging(0.688)	tolerated(0.85)	neutral(0.246)	NULL
PARP4	143	genome.wustl.edu	37	13	25027741	25027741	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006437.3	-1	reviewed	p.A937V	0.000	199	0%	118	44.1%	24	33.3%	benign(0.035)	deleterious(0.04)	neutral(0.351)	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
PARP4	143	genome.wustl.edu	37	13	25030506	25030506	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006437.3	-1	reviewed	p.V845	0.922	139	0%	89	39.3%	30	50%	-	-	-	NULL
ATP12A	479	genome.wustl.edu	37	13	25266591	25266591	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001676.5	+1	reviewed	p.R365W	1.000	24	0%	29	34.5%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M
ATP12A	479	genome.wustl.edu	37	13	25274961	25274961	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001676.5	+1	reviewed	p.P594	0.963	250	0%	121	43%	8	87.5%	-	-	-	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M
RNF17	56163	genome.wustl.edu	37	13	25378532	25378532	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031277.2	+1	reviewed	p.H686Y	1.000	422	0%	144	39.6%	0	-	benign(0)	tolerated(0.19)	neutral(0.050)	HMMPfam_TUDOR
CENPJ	55835	genome.wustl.edu	37	13	25457411	25457411	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018451.3	-1	reviewed	p.T1307	0.995	392	0.3%	192	40.6%	31	41.9%	-	-	-	HMMPfam_Tcp10_C
CENPJ	55835	genome.wustl.edu	37	13	25480926	25480926	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018451.3	-1	reviewed	p.R417I	0.554	302	0%	146	22.6%	1	100%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
CENPJ	55835	genome.wustl.edu	37	13	25484020	25484020	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018451.3	-1	reviewed	p.R258H	0.164	171	0%	95	31.6%	4	75%	benign(0.22)	tolerated(0.5)	neutral(0.032)	NULL
MTMR6	9107	genome.wustl.edu	37	13	25831890	25831890	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004685.3	-1	validated	p.A318V	1.000	184	0%	64	34.4%	14	50%	possibly_damaging(0.795)	tolerated(0.16)	neutral(0.358)	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
NUPL1	9818	genome.wustl.edu	37	13	25883397	25883397	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014089.3	+1	reviewed	p.T88I	1.000	507	0%	191	37.7%	11	0%	possibly_damaging(0.45)	deleterious(0.04)	deleterious(0.496)	NULL
NUPL1	9818	genome.wustl.edu	37	13	25901075	25901075	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014089.3	+1	reviewed	p.Q351	1.000	197	0%	84	16.7%	21	9.5%	-	-	-	NULL
ATP8A2	51761	genome.wustl.edu	37	13	26151236	26151236	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016529.4	+1	validated	p.R581Q	1.000	217	0.5%	70	31.4%	0	-	possibly_damaging(0.902)	deleterious(0.05)	deleterious(0.702)	superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N
GPR12	2835	genome.wustl.edu	37	13	27333387	27333387	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005288.3	-1	validated	p.P193L	1.000	17	0%	21	47.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR12	2835	genome.wustl.edu	37	13	27333601	27333601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005288.3	-1	validated	p.A122T	1.000	38	0%	23	21.7%	0	-	benign(0.017)	tolerated(0.15)	neutral(0.241)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
USP12	219333	genome.wustl.edu	37	13	27645275	27645275	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182488.2	-1	provisional	p.R315Q	1.000	208	0%	110	48.2%	8	37.5%	possibly_damaging(0.85)	tolerated(0.09)	deleterious(0.623)	HMMPfam_UCH,PatternScan_UCH_2_2,superfamily_SSF54001
GTF3A	2971	genome.wustl.edu	37	13	28006937	28006937	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002097.2	+1	reviewed	p.H186	0.312	37	0%	36	47.2%	131	41.9%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LNX2	222484	genome.wustl.edu	37	13	28155465	28155465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153371.3	-1	validated	p.R126C	0.996	78	0%	45	51.1%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FLT3	2322	genome.wustl.edu	37	13	28578214	28578214	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004119.2	-1	reviewed	p.P986L	0.020	107	0%	60	18.3%	0	-	possibly_damaging(0.889)	deleterious(0)	deleterious(0.794)	NULL
FLT3	2322	genome.wustl.edu	37	13	28626755	28626755	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004119.2	-1	reviewed	p.A181T	0.237	291	0.7%	150	42%	0	-	benign(0.366)	tolerated(0.7)	neutral(0.119)	NULL
FLT1	2321	genome.wustl.edu	37	13	28919630	28919630	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002019.4	-1	reviewed	p.A769	0.317	147	0%	67	58.2%	1	0%	-	-	-	NULL
FLT1	2321	genome.wustl.edu	37	13	28919631	28919631	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002019.4	-1	reviewed	p.A769V	1.000	145	0%	66	31.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC46A3	283537	genome.wustl.edu	37	13	29287604	29287604	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135919.1	-1	validated	p.L91	0.130	86	0%	54	51.9%	2	0%	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
SLC46A3	283537	genome.wustl.edu	37	13	29292047	29292047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135919.1	-1	validated	p.R30Q	0.856	295	0%	172	33.7%	1	0%	possibly_damaging(0.834)	tolerated(0.31)	neutral(0.345)	HMMPfam_MFS_1
MTUS2	23281	genome.wustl.edu	37	13	29598882	29598882	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033602.2	+1	validated	p.R26Q	0.034	32	0%	22	50%	0	-	benign(0.26)	tolerated(0.36)	neutral(0.047)	NULL
MTUS2	23281	genome.wustl.edu	37	13	29600115	29600115	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033602.2	+1	validated	p.S437F	0.002	66	0%	35	48.6%	0	-	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	NULL
SLC7A1	6541	genome.wustl.edu	37	13	30098269	30098269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003045.4	-1	validated	p.G276S	1.000	11	0%	10	60%	70	54.2%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_AA_permease
HMGB1	3146	genome.wustl.edu	37	13	31037387	31037387	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002128.4	-1	validated	p.T85A	1.000	302	0%	183	12%	455	17.5%	benign(0.005)	tolerated(0.39)	neutral(0.016)	NULL
HSPH1	10808	genome.wustl.edu	37	13	31726972	31726972	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000439123	-1	known	p.F79	0.000	151	0%	52	44.2%	4	25%	-	-	-	NULL
HSPH1	10808	genome.wustl.edu	37	13	31727058	31727058	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006644.2	-1	validated	p.R154*	1.000	123	0%	53	13.2%	34	8.8%	-	-	-	HMMPfam_HSP70,superfamily_Actin-like ATPase domain
B3GALTL	145173	genome.wustl.edu	37	13	31897937	31897937	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194318.3	+1	reviewed	p.R412*	0.841	112	0%	59	55.9%	9	22.2%	-	-	-	HMMPfam_Fringe
RXFP2	122042	genome.wustl.edu	37	13	32366825	32366825	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130806.3	+1	reviewed	p.C462	1.000	138	0%	72	44.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RXFP2	122042	genome.wustl.edu	37	13	32367033	32367033	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130806.3	+1	reviewed	p.R532*	0.997	120	0%	71	33.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FRY	10129	genome.wustl.edu	37	13	32759149	32759149	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023037.2	+1	validated	p.L1061	0.786	171	0.6%	96	42.7%	0	-	-	-	-	NULL
FRY	10129	genome.wustl.edu	37	13	32813884	32813884	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023037.2	+1	validated	p.L2185I	1.000	71	0%	34	47.1%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FRY	10129	genome.wustl.edu	37	13	32836460	32836460	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023037.2	+1	validated	p.L2543F	0.999	134	0%	72	45.8%	2	100%	possibly_damaging(0.948)	tolerated(0.31)	neutral(0.418)	NULL
ZAR1L	646799	genome.wustl.edu	37	13	32885904	32885904	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136571.1	-1	reviewed	p.A53	0.000	9	0.000	14	0.500	0	-	-	-	-	NULL
BRCA2	675	genome.wustl.edu	37	13	32912067	32912067	+	Missense_Mutation	SNP	T	T	G	rs80358606		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000059.3	+1	reviewed	p.F1192C	0.000	155	0%	53	35.8%	2	50%	probably_damaging(0.954)	deleterious(0.01)	deleterious(0.803)	NULL
BRCA2	675	genome.wustl.edu	37	13	32913732	32913732	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000059.3	+1	reviewed	p.N1747S	0.402	127	0%	47	46.8%	3	33.3%	probably_damaging(0.989)	tolerated(0.19)	deleterious(0.489)	NULL
BRCA2	675	genome.wustl.edu	37	13	32929304	32929304	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000059.3	+1	reviewed	p.D2438	0.000	146	0%	73	42.5%	0	-	-	-	-	NULL
BRCA2	675	genome.wustl.edu	37	13	32937470	32937470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000059.3	+1	reviewed	p.A2711T	0.001	270	0%	98	37.8%	2	0%	benign(0.153)	tolerated(0.56)	neutral(0.020)	HMMPfam_BRCA-2_OB1,superfamily_Nucleic_acid_OB
BRCA2	675	genome.wustl.edu	37	13	32945129	32945129	+	Missense_Mutation	SNP	C	C	T	rs80359104		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000059.3	+1	reviewed	p.R2842C	1.000	202	0%	76	35.5%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tower,superfamily_Nucleic_acid_OB,superfamily_SSF81878
BRCA2	675	genome.wustl.edu	37	13	32972391	32972391	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000059.3	+1	reviewed	p.Q3247H	0.185	252	0%	114	36.8%	2	100%	possibly_damaging(0.923)	tolerated(0.14)	deleterious(0.622)	NULL
N4BP2L2	10443	genome.wustl.edu	37	13	33017158	33017158	+	Missense_Mutation	SNP	G	G	A	rs17077569	byCluster;byFrequency;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033111.3	-1	validated	p.R506C	0.000	699	0.3%	346	52%	2	0%	benign(0.016)	tolerated(0.13)	neutral(0.253)	NULL
N4BP2L2	10443	genome.wustl.edu	37	13	33017924	33017924	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033111.3	-1	validated	p.K250N	0.000	348	0%	174	41.4%	4	50%	possibly_damaging(0.895)	deleterious(0)	deleterious(0.797)	NULL
N4BP2L2	10443	genome.wustl.edu	37	13	33111043	33111043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014887.2	-1	validated	p.A41V	0.000	232	0%	146	47.9%	16	43.7%	possibly_damaging(0.49)	tolerated(0.07)	deleterious(0.482)	NULL
PDS5B	23047	genome.wustl.edu	37	13	33327533	33327533	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015032.3	+1	reviewed	p.R934W	1.000	246	0%	124	47.6%	12	58.3%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	superfamily_ARM repeat
STARD13	90627	genome.wustl.edu	37	13	33679773	33679773	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178006.3	-1	validated	p.S1100Y	1.000	93	1.1%	59	55.9%	11	36.3%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_START,HMMSmart_SM00234
STARD13	90627	genome.wustl.edu	37	13	33684878	33684878	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178006.3	-1	validated	p.F925Y	1.000	161	0%	90	47.8%	6	66.6%	benign(0.316)	tolerated(0.22)	neutral(0.141)	HMMPfam_START,HMMSmart_SM00234,superfamily_Bet v1-like
STARD13	90627	genome.wustl.edu	37	13	33701540	33701540	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178006.3	-1	validated	p.H631R	1.000	18	0%	15	53.3%	6	16.6%	benign(0.052)	deleterious(0)	neutral(0.448)	NULL
STARD13	90627	genome.wustl.edu	37	13	33703314	33703314	+	Silent	SNP	G	G	A	rs192691086	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178006.3	-1	validated	p.V500	0.871	82	0%	81	44.4%	5	0%	-	-	-	NULL
NBEA	26960	genome.wustl.edu	37	13	35733340	35733340	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015678.4	+1	validated	p.S1011I	1.000	139	0%	61	47.5%	4	75%	benign(0.004)	tolerated(0.19)	neutral(0.050)	superfamily_ARM repeat
NBEA	26960	genome.wustl.edu	37	13	35770406	35770406	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015678.4	+1	validated	p.A1778D	0.987	114	0%	45	42.2%	3	33.3%	possibly_damaging(0.748)	tolerated(0.19)	neutral(0.324)	superfamily_ARM repeat
NBEA	26960	genome.wustl.edu	37	13	35785283	35785283	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015678.4	+1	validated	p.A1872V	1.000	209	0%	60	46.7%	3	100%	possibly_damaging(0.455)	tolerated(0.26)	neutral(0.183)	superfamily_ARM repeat
MAB21L1	4081	genome.wustl.edu	37	13	36049406	36049406	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005584.4	-1	reviewed	p.D290	1.000	56	0%	71	43.7%	1	100%	-	-	-	HMMPfam_Mab-21
NBEA	26960	genome.wustl.edu	37	13	36229024	36229024	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015678.4	+1	validated	p.T2669A	1.000	225	0%	106	47.2%	10	70%	benign(0.02)	tolerated(0.06)	neutral(0.324)	HMMSmart_SM00320,superfamily_WD40 repeat-like
NBEA	26960	genome.wustl.edu	37	13	36229853	36229853	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015678.4	+1	validated	p.R2756W	0.968	106	0%	82	42.7%	11	72.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_WD40 repeat-like
SOHLH2	54937	genome.wustl.edu	37	13	36764166	36764166	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017826.2	-1	validated	p.G186	0.020	464	0%	152	39.5%	0	-	-	-	-	NULL
CCNA1	8900	genome.wustl.edu	37	13	37014167	37014167	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003914.3	+1	reviewed	p.T315	0.000	194	0%	78	39.7%	23	30.4%	-	-	-	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like
FAM48A	55578	genome.wustl.edu	37	13	37596174	37596174	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000469488	-1	known	p.T100I	1.000	157	0%	52	51.9%	45	48.8%	-	-	-	NULL
CSNK1A1L	122011	genome.wustl.edu	37	13	37678626	37678626	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145203.5	-1	validated	p.F256	1.000	254	0%	225	45.3%	0	-	-	-	-	superfamily_Kinase_like
POSTN	10631	genome.wustl.edu	37	13	38164595	38164595	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006475.2	-1	validated	p.A119T	0.999	182	0%	116	46.6%	16	6.2%	benign(0.001)	tolerated(0.45)	neutral(0.012)	HMMPfam_Fasciclin,superfamily_FAS1 domain
TRPC4	7223	genome.wustl.edu	37	13	38225514	38225514	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003306.1	-1	validated	p.P656L	1.000	315	0%	150	44.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TRPC4	7223	genome.wustl.edu	37	13	38266310	38266310	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003306.1	-1	validated	p.P354S	1.000	160	0%	123	40.7%	1	0%	benign(0)	tolerated(0.5)	neutral(0.010)	NULL
FREM2	341640	genome.wustl.edu	37	13	39425912	39425912	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207361.4	+1	reviewed	p.R2278C	1.000	105	1%	57	26.3%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Calx-beta,HMMSmart_SM00237
FREM2	341640	genome.wustl.edu	37	13	39438677	39438677	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207361.4	+1	reviewed	p.F2639	1.000	109	0%	71	57.7%	5	100%	-	-	-	NULL
STOML3	161003	genome.wustl.edu	37	13	39544411	39544411	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145286.2	-1	validated	p.L143M	1.000	83	0%	42	40.5%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Band_7,HMMSmart_PHB
PROSER1	80209	genome.wustl.edu	37	13	39586248	39586248	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025138.3	-1	validated	p.A895V	1.000	122	0%	69	52.2%	42	47.6%	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	NULL
PROSER1	80209	genome.wustl.edu	37	13	39591666	39591666	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025138.3	-1	validated	p.S249L	0.998	385	0%	111	36%	33	39.3%	possibly_damaging(0.454)	deleterious(0)	deleterious(0.593)	NULL
COG6	57511	genome.wustl.edu	37	13	40298669	40298669	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020751.2	+1	reviewed	p.L573I	0.981	209	0%	64	39.1%	44	50%	possibly_damaging(0.454)	tolerated(0.76)	neutral(0.149)	HMMPfam_COG6
SLC25A15	10166	genome.wustl.edu	37	13	41382629	41382629	+	Silent	SNP	G	G	A	rs183697658	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014252.3	+1	reviewed	p.A226	0.950	351	0%	196	12.8%	8	0%	-	-	-	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
WBP4	11193	genome.wustl.edu	37	13	41650291	41650291	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007187.3	+1	reviewed	p.S225L	0.984	163	0%	86	44.2%	16	18.7%	possibly_damaging(0.821)	tolerated(0.07)	deleterious(0.629)	NULL
KBTBD7	84078	genome.wustl.edu	37	13	41767917	41767917	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032138.4	-1	provisional	p.A159	1.000	44	0%	42	47.6%	21	47.6%	-	-	-	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
KIAA0564	23078	genome.wustl.edu	37	13	42161751	42161751	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015058.1	-1	validated	p.G1723D	1.000	71	0%	51	49%	7	71.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00327,superfamily_vWA-like
AKAP11	11215	genome.wustl.edu	37	13	42876971	42876971	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016248.2	+1	reviewed	p.I1363	1.000	131	0%	61	45.9%	6	50%	-	-	-	NULL
EPSTI1	94240	genome.wustl.edu	37	13	43474496	43474496	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002264.1	-1	validated	p.R266	0.001	565	0%	255	47.1%	5	0%	-	-	-	NULL
CCDC122	160857	genome.wustl.edu	37	13	44443504	44443504	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144974.3	-1	validated	p.D3E	0.011	864	0%	270	36.3%	1	100%	benign(0.001)	deleterious(0.01)	neutral(0.406)	NULL
LACC1	144811	genome.wustl.edu	37	13	44455495	44455495	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128303.1	+1	validated	p.D125V	1.000	310	0%	165	41.2%	0	-	benign(0.167)	deleterious(0.02)	neutral(0.398)	NULL
FAM194B	220081	genome.wustl.edu	37	13	46154761	46154761	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182542.2	-1	predicted	p.T299I	0.000	586	0%	312	38.5%	0	-	possibly_damaging(0.733)	tolerated(0.21)	neutral(0.312)	NULL
SIAH3	283514	genome.wustl.edu	37	13	46357723	46357723	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198849.2	-1	validated	p.R202H	1.000	15	0%	21	57.1%	0	-	probably_damaging(0.983)	deleterious(0.01)	deleterious(0.835)	superfamily_Traf_like,HMMPfam_Sina
ZC3H13	23091	genome.wustl.edu	37	13	46542960	46542960	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015070.3	-1	validated	p.S1240I	0.969	276	0%	97	41.2%	16	56.2%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
ZC3H13	23091	genome.wustl.edu	37	13	46563203	46563203	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015070.3	-1	validated	p.S325F	1.000	283	0%	117	42.7%	25	52%	unknown(0)	deleterious(0.01)	-	NULL
CPB2	1361	genome.wustl.edu	37	13	46629969	46629969	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001872.3	-1	reviewed	p.E339*	0.997	176	0%	87	46%	0	-	-	-	-	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
NUDT15	55270	genome.wustl.edu	37	13	48619867	48619867	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018283.1	+1	provisional	p.E143*	1.000	261	0.4%	95	47.4%	5	20%	-	-	-	HMMPfam_NUDIX,superfamily_Nudix
ITM2B	9445	genome.wustl.edu	37	13	48830448	48830448	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021999.4	+1	reviewed	p.E128K	1.000	180	0%	105	47.6%	352	35.7%	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	NULL
RB1	5925	genome.wustl.edu	37	13	48919278	48919278	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000321.2	+1	reviewed	p.M148T	1.000	487	0%	173	11%	14	0%	benign(0.003)	tolerated(0.35)	neutral(0.021)	NULL
RB1	5925	genome.wustl.edu	37	13	48954342	48954342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000321.2	+1	reviewed	p.A488V	1.000	192	0%	139	43.9%	15	46.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_RB_A,superfamily_Cyclin-like
RB1	5925	genome.wustl.edu	37	13	49037929	49037929	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000321.2	+1	reviewed	p.I723	0.986	251	0%	116	37.9%	24	45.8%	-	-	-	HMMPfam_RB_B,HMMSmart_SM00385,superfamily_Cyclin-like
RCBTB2	1102	genome.wustl.edu	37	13	49096035	49096035	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001268.2	-1	reviewed	p.K14R	1.000	131	0%	68	51.5%	0	-	benign(0.02)	tolerated(0.3)	neutral(0.030)	NULL
FNDC3A	22862	genome.wustl.edu	37	13	49781280	49781280	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079673.1	+1	validated	p.F1116V	1.000	123	0%	77	49.4%	41	51.2%	benign(0.008)	tolerated(0.33)	neutral(0.024)	HMMSmart_SM00060,superfamily_Fibronectin type III
SETDB2	83852	genome.wustl.edu	37	13	50042039	50042039	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031915.2	+1	validated	p.S95F	0.006	312	0%	104	43.3%	3	66.6%	probably_damaging(0.98)	tolerated(0.1)	deleterious(0.710)	NULL
SETDB2	83852	genome.wustl.edu	37	13	50050914	50050914	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031915.2	+1	validated	p.N215T	1.000	165	0%	79	49.4%	6	33.3%	probably_damaging(0.995)	tolerated(0.28)	deleterious(0.489)	HMMPfam_MBD,HMMSmart_SM00391,superfamily_DNA-binding domain
SETDB2	83852	genome.wustl.edu	37	13	50050947	50050947	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031915.2	+1	validated	p.T226N	1.000	198	0%	87	11.5%	5	0%	probably_damaging(1)	tolerated(0.31)	deleterious(0.527)	HMMPfam_MBD,HMMSmart_SM00391,superfamily_DNA-binding domain
PHF11	51131	genome.wustl.edu	37	13	50102647	50102647	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000426879	+1	known	p.Q236*	0.071	140	0%	73	43.8%	10	20%	benign(0.01)	tolerated(0.75)	neutral(0.002)	NULL
RCBTB1	55213	genome.wustl.edu	37	13	50123608	50123608	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018191.3	-1	reviewed	p.R344H	1.000	28	0%	26	26.9%	13	53.8%	benign(0.149)	tolerated(0.24)	neutral(0.050)	NULL
RCBTB1	55213	genome.wustl.edu	37	13	50129671	50129671	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018191.3	-1	reviewed	p.A195S	1.000	190	0%	113	41.6%	13	61.5%	probably_damaging(0.968)	deleterious(0.03)	deleterious(0.774)	superfamily_RCC1/BLIP-II
KCNRG	283518	genome.wustl.edu	37	13	50589840	50589840	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173605.1	+1	validated	p.L71V	0.784	300	0%	116	48.3%	1	0%	benign(0.051)	tolerated(0.6)	neutral(0.007)	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
GUCY1B2	2974	genome.wustl.edu	37	13	51591063	51591063	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000389600	-1	known	p.A329T	0.029	136	0.7%	72	37.5%	0	-	-	-	-	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
SERPINE3	647174	genome.wustl.edu	37	13	51935993	51935993	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101320.1	+1	validated	p.R379W	1.000	263	1.1%	69	53.6%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN,superfamily_Serpins
WDFY2	115825	genome.wustl.edu	37	13	52313269	52313269	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052950.3	+1	reviewed	p.I228T	1.000	102	0%	51	41.2%	8	50%	possibly_damaging(0.83)	deleterious(0)	deleterious(0.760)	superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1
ATP7B	540	genome.wustl.edu	37	13	52548680	52548680	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000053.2	-1	reviewed	p.R226W	0.063	49	0%	30	33.3%	10	40%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
NEK5	341676	genome.wustl.edu	37	13	52661584	52661584	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199289.1	-1	provisional	p.R428C	0.999	291	0.3%	178	42.7%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NEK3	4752	genome.wustl.edu	37	13	52707938	52707938	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000258597	-1	known	p.F442L	0.961	73	0%	41	36.6%	5	40%	benign(0.271)	tolerated(0.14)	neutral(0.279)	NULL
NEK3	4752	genome.wustl.edu	37	13	52710259	52710259	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000452082	-1	known	p.R185*	0.001	252	0.4%	130	45.4%	10	40%	-	-	-	NULL
THSD1	55901	genome.wustl.edu	37	13	52952397	52952397	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018676.3	-1	reviewed	p.A570T	0.000	20	0%	19	47.4%	0	-	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
THSD1	55901	genome.wustl.edu	37	13	52952547	52952547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018676.3	-1	reviewed	p.A520T	0.736	31	0%	25	40%	0	-	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	NULL
VPS36	51028	genome.wustl.edu	37	13	53000136	53000136	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016075.2	-1	validated	p.Y235	0.968	247	0%	142	44.4%	14	42.8%	-	-	-	"HMMPfam_EAP30,superfamily_""Winged helix"" DNA-binding domain"
PCDH17	27253	genome.wustl.edu	37	13	58209061	58209061	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040429.2	+1	reviewed	p.S794Y	1.000	19	0%	32	43.8%	4	0%	probably_damaging(0.99)	tolerated(0.1)	deleterious(0.728)	NULL
PCDH17	27253	genome.wustl.edu	37	13	58298910	58298910	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040429.2	+1	reviewed	p.E988K	1.000	190	0%	82	40.2%	1	0%	probably_damaging(0.965)	tolerated(0.08)	deleterious(0.707)	NULL
DIAPH3	81624	genome.wustl.edu	37	13	60348872	60348872	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042517.1	-1	validated	p.P1083	0.441	102	0%	54	42.6%	15	46.6%	-	-	-	NULL
DIAPH3	81624	genome.wustl.edu	37	13	60407354	60407354	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042517.1	-1	validated	p.E972K	1.000	433	0.2%	80	46.3%	16	50%	benign(0.003)	tolerated(0.9)	-	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
PCDH20	64881	genome.wustl.edu	37	13	61987036	61987036	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022843.3	-1	validated	p.L399R	1.000	98	0%	62	56.5%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_CA,superfamily_Cadherin
PCDH9	5101	genome.wustl.edu	37	13	66878839	66878839	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203487.2	-1	reviewed	p.S1221Y	1.000	166	0%	43	58.1%	0	-	benign(0.223)	deleterious(0.02)	neutral(0.405)	NULL
PCDH9	5101	genome.wustl.edu	37	13	67205533	67205533	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203487.2	-1	reviewed	p.R1050H	1.000	47	0%	13	53.8%	0	-	benign(0.058)	deleterious(0)	neutral(0.448)	NULL
PCDH9	5101	genome.wustl.edu	37	13	67800835	67800835	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203487.2	-1	reviewed	p.F580V	1.000	113	0%	62	38.7%	1	0%	possibly_damaging(0.804)	deleterious(0.05)	deleterious(0.648)	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDH9	5101	genome.wustl.edu	37	13	67801427	67801427	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203487.2	-1	reviewed	p.K382	1.000	200	0%	104	42.3%	3	0%	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
KLHL1	57626	genome.wustl.edu	37	13	70370969	70370969	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020866.2	-1	validated	p.R514*	1.000	243	0%	113	40.7%	0	-	-	-	-	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
KLHL1	57626	genome.wustl.edu	37	13	70681446	70681446	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020866.2	-1	validated	p.V129A	0.995	20	0%	16	37.5%	0	-	benign(0.003)	tolerated(0.61)	neutral(0.004)	NULL
DACH1	1602	genome.wustl.edu	37	13	72063207	72063207	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080759.4	-1	reviewed	p.P548	0.998	105	0%	39	33.3%	2	50%	-	-	-	NULL
DACH1	1602	genome.wustl.edu	37	13	72147081	72147081	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080759.4	-1	reviewed	p.S397Y	1.000	160	0%	59	11.9%	4	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
DIS3	22894	genome.wustl.edu	37	13	73351615	73351615	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014953.3	-1	validated	p.K199	1.000	486	0.2%	214	42.1%	18	50%	-	-	-	superfamily_PIN domain-like
KLF12	11278	genome.wustl.edu	37	13	74420289	74420289	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007249.4	-1	validated	p.T115	1.000	154	0%	78	44.9%	4	75%	-	-	-	NULL
TBC1D4	9882	genome.wustl.edu	37	13	75898521	75898521	+	Nonsense_Mutation	SNP	G	G	A	rs61736969	byCluster;byFrequency;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014832.2	-1	validated	p.R684*	0.991	244	0%	146	42.5%	0	-	-	-	-	NULL
TBC1D4	9882	genome.wustl.edu	37	13	75915349	75915349	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014832.2	-1	validated	p.Q508R	1.000	135	0%	79	44.3%	6	66.6%	benign(0.004)	deleterious(0.01)	neutral(0.406)	NULL
TBC1D4	9882	genome.wustl.edu	37	13	75936237	75936237	+	Silent	SNP	C	C	T	rs145011623	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014832.2	-1	validated	p.P335	0.031	16	0%	19	36.8%	12	50%	-	-	-	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
LMO7	4008	genome.wustl.edu	37	13	76370831	76370831	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005358.5	+1	reviewed	p.G188	0.997	261	0%	98	14.3%	11	27.2%	-	-	-	superfamily_Calponin-homology
LMO7	4008	genome.wustl.edu	37	13	76397787	76397787	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000447038	+1	known	p.G585R	0.000	57	0%	42	47.6%	28	28.5%	-	-	-	NULL
MYCBP2	23077	genome.wustl.edu	37	13	77662983	77662983	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015057.4	-1	validated	p.R3532Q	1.000	185	0%	56	37.5%	5	20%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MYCBP2	23077	genome.wustl.edu	37	13	77730338	77730338	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015057.4	-1	validated	e46-1	1.000	162	0%	82	42.7%	0	-	-	-	-	-
MYCBP2	23077	genome.wustl.edu	37	13	77740507	77740507	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015057.4	-1	validated	p.F2061L	1.000	196	0%	101	36.6%	2	0%	possibly_damaging(0.891)	tolerated(0.17)	neutral(0.409)	NULL
EDNRB	1910	genome.wustl.edu	37	13	78474023	78474023	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000115.2	-1	reviewed	p.V389M	1.000	274	0%	45	42.2%	0	-	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	superfamily_Family A G protein-coupled receptor-like
EDNRB	1910	genome.wustl.edu	37	13	78492427	78492427	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000115.2	-1	reviewed	p.I94	0.074	63	0%	45	46.7%	2	0%	-	-	-	superfamily_Family A G protein-coupled receptor-like
RNF219	79596	genome.wustl.edu	37	13	79189919	79189919	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024546.3	-1	validated	p.S659	0.910	153	0%	52	44.2%	7	71.4%	-	-	-	NULL
RNF219	79596	genome.wustl.edu	37	13	79189972	79189972	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024546.3	-1	validated	p.P642S	0.819	103	1%	46	52.2%	4	25%	possibly_damaging(0.586)	tolerated(0.07)	deleterious(0.521)	NULL
RBM26	64062	genome.wustl.edu	37	13	79911257	79911257	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022118.3	-1	validated	p.D878Y	1.000	121	0%	61	41%	43	34.8%	benign(0.195)	deleterious(0)	neutral(0.463)	superfamily_SSF54928
RBM26	64062	genome.wustl.edu	37	13	79933756	79933756	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022118.3	-1	validated	p.G495S	1.000	456	0%	154	46.1%	10	40%	probably_damaging(0.998)	tolerated(0.5)	deleterious(0.484)	NULL
RBM26	64062	genome.wustl.edu	37	13	79939715	79939715	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022118.3	-1	validated	p.R472I	1.000	267	0%	133	49.6%	13	76.9%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
RBM26	64062	genome.wustl.edu	37	13	79945256	79945256	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022118.3	-1	validated	p.R153I	1.000	231	0%	101	37.6%	8	50%	unknown(0)	deleterious(0)	-	NULL
NDFIP2	54602	genome.wustl.edu	37	13	80107533	80107533	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019080.2	+1	validated	p.E188A	1.000	162	0%	53	43.4%	11	45.4%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_DUF2370
SLITRK1	114798	genome.wustl.edu	37	13	84454666	84454666	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052910.1	-1	reviewed	p.A326V	0.842	88	0%	80	46.3%	0	-	benign(0.005)	tolerated(0.39)	neutral(0.016)	NULL
SLITRK1	114798	genome.wustl.edu	37	13	84455428	84455428	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052910.1	-1	reviewed	p.R72Q	1.000	97	0%	69	39.1%	0	-	possibly_damaging(0.71)	tolerated(0.22)	neutral(0.298)	superfamily_SSF52058
SLITRK1	114798	genome.wustl.edu	37	13	84455562	84455562	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052910.1	-1	reviewed	p.K27N	1.000	92	0%	69	44.9%	0	-	benign(0.003)	tolerated(0.62)	neutral(0.004)	NULL
SLITRK6	84189	genome.wustl.edu	37	13	86368840	86368840	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032229.2	-1	validated	p.T602A	0.998	260	0%	69	50.7%	6	66.6%	benign(0.004)	tolerated(0.93)	-	NULL
SLITRK6	84189	genome.wustl.edu	37	13	86370210	86370210	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032229.2	-1	validated	p.N145T	1.000	235	0%	45	48.9%	5	40%	benign(0.004)	deleterious(0.03)	neutral(0.364)	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
GPC5	2262	genome.wustl.edu	37	13	92345670	92345670	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004466.4	+1	reviewed	p.D185	0.998	224	0%	76	44.7%	0	-	-	-	-	HMMPfam_Glypican
ABCC4	10257	genome.wustl.edu	37	13	95724074	95724074	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005845.3	-1	reviewed	p.D1018Y	0.993	150	0%	90	44.4%	21	38%	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC4	10257	genome.wustl.edu	37	13	95726537	95726537	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005845.3	-1	reviewed	p.V950I	0.995	92	0%	44	45.5%	34	52.9%	possibly_damaging(0.796)	tolerated(0.09)	deleterious(0.595)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC4	10257	genome.wustl.edu	37	13	95829990	95829990	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005845.3	-1	reviewed	p.D566	1.000	112	0%	64	29.7%	18	27.7%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC4	10257	genome.wustl.edu	37	13	95840721	95840721	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005845.3	-1	reviewed	p.V447M	1.000	131	0%	87	16.1%	15	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,superfamily_P-loop containing nucleoside triphosphate hydrolases
DZIP1	22873	genome.wustl.edu	37	13	96274644	96274644	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198968.2	-1	validated	p.P355S	0.299	430	0%	173	45.7%	13	53.8%	benign(0.021)	tolerated(0.15)	neutral(0.242)	NULL
DNAJC3	5611	genome.wustl.edu	37	13	96439348	96439348	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006260.3	+1	reviewed	p.K432N	1.000	172	0%	83	43.4%	20	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain
UGGT2	55757	genome.wustl.edu	37	13	96579309	96579309	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020121.3	-1	validated	p.K725Q	0.932	321	0%	144	45.1%	0	-	benign(0.174)	tolerated(0.17)	neutral(0.075)	NULL
UGGT2	55757	genome.wustl.edu	37	13	96675300	96675300	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020121.3	-1	validated	p.A160V	0.981	356	0%	152	35.5%	8	12.5%	benign(0.001)	tolerated(0.32)	neutral(0.024)	NULL
MBNL2	10150	genome.wustl.edu	37	13	98009078	98009078	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000376679	+1	known	p.R11Q	1.000	14	0%	11	45.5%	5	20%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
LOC121906	121906	genome.wustl.edu	37	13	98128417	98128417	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344083.1	+1	model	p.F188S	1.000	98	0%	27	55.6%	0	-	-	-	-	HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)
FARP1	10160	genome.wustl.edu	37	13	99099047	99099047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005766.2	+1	reviewed	p.A1011V	1.000	59	0%	51	39.2%	100	38%	possibly_damaging(0.72)	deleterious(0)	deleterious(0.706)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
STK24	8428	genome.wustl.edu	37	13	99114060	99114060	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003576.3	-1	validated	p.A353S	0.999	76	0%	63	50.8%	101	42.5%	benign(0.005)	tolerated(0.25)	neutral(0.037)	NULL
STK24	8428	genome.wustl.edu	37	13	99118752	99118752	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003576.3	-1	validated	p.E233K	1.000	139	0%	109	45.9%	129	51.1%	benign(0.072)	deleterious(0)	neutral(0.450)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SLC15A1	6564	genome.wustl.edu	37	13	99376274	99376274	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005073.3	-1	reviewed	p.S86L	0.017	136	0%	60	43.3%	5	60%	benign(0.001)	tolerated(0.11)	neutral(0.272)	HMMPfam_PTR2,superfamily_MFS general substrate transporter,PatternScan_PTR2_1
DOCK9	23348	genome.wustl.edu	37	13	99519785	99519785	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130049.1	-1	validated	p.L1061	0.997	242	0%	127	15.7%	9	22.2%	-	-	-	NULL
GPR183	1880	genome.wustl.edu	37	13	99947534	99947534	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004951.4	-1	reviewed	p.S289Y	1.000	149	0%	64	42.2%	3	0%	possibly_damaging(0.893)	deleterious(0.03)	deleterious(0.716)	HMMPfam_7tm_1,superfamily_SSF81321
TM9SF2	9375	genome.wustl.edu	37	13	100201465	100201465	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004800.1	+1	provisional	p.F439L	1.000	540	0%	176	43.2%	101	46.5%	benign(0)	tolerated(1)	-	HMMPfam_EMP70
TMTC4	84899	genome.wustl.edu	37	13	101289892	101289892	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032813.2	-1	validated	p.A300V	0.035	11	0%	17	64.7%	54	55.5%	benign(0)	tolerated(1)	-	NULL
NALCN	259232	genome.wustl.edu	37	13	101717868	101717868	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052867.2	-1	validated	p.R1498C	1.000	36	0%	30	50%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TPP2	7174	genome.wustl.edu	37	13	103286379	103286379	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003291.2	+1	reviewed	p.T442A	1.000	85	0%	34	50%	18	55.5%	benign(0.039)	tolerated(0.29)	neutral(0.031)	HMMPfam_Peptidase_S8,superfamily_Pept_S8_S53
METTL21C	196541	genome.wustl.edu	37	13	103338505	103338505	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010977.1	-1	predicted	p.K224T	1.000	103	0%	66	60.6%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Methyltransf_16,superfamily_SSF53335
LOC643677	643677	genome.wustl.edu	37	13	103381858	103381858	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.S6911	0.000	122	0%	47	48.9%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103381916	103381916	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.R6892I	0.354	147	0%	60	43.3%	0	-	unknown(0)	deleterious(0.03)	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103384540	103384540	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.I6017	0.000	444	0%	118	45.8%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103387547	103387547	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.S5015L	0.000	133	0%	41	34.1%	0	-	probably_damaging(0.987)	tolerated(0.14)	deleterious(0.686)	NULL
LOC643677	643677	genome.wustl.edu	37	13	103387755	103387755	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.A4946T	0.000	197	0%	60	38.3%	0	-	unknown(0)	tolerated(0.31)	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103388707	103388707	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.K4628N	0.001	181	0%	54	46.3%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
LOC643677	643677	genome.wustl.edu	37	13	103389712	103389712	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.L4293F	0.000	315	0%	77	41.6%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103391528	103391528	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.T3769M	0.000	372	0%	60	40%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103395303	103395303	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.L2511I	0.001	134	0.7%	42	50%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103397636	103397636	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.D1733G	0.002	146	0%	33	45.5%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103397913	103397913	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344085.1	-1	model	p.A1641S	0.749	325	0%	79	26.6%	0	-	-	-	-	NULL
ERCC5	2073	genome.wustl.edu	37	13	103514840	103514840	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000123.2	+1	reviewed	p.A447	0.000	76	0%	30	43.3%	22	59%	-	-	-	superfamily_PIN domain-like
ARGLU1	55082	genome.wustl.edu	37	13	107211797	107211797	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018011.3	-1	validated	p.A186T	1.000	147	0.7%	83	20.5%	75	36%	possibly_damaging(0.507)	deleterious(0.01)	deleterious(0.575)	NULL
LIG4	3981	genome.wustl.edu	37	13	108861415	108861415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098268.1	-1	reviewed	p.S734R	0.658	76	0%	51	27.5%	7	28.5%	benign(0)	tolerated(1)	-	superfamily_BRCT
MYO16	23026	genome.wustl.edu	37	13	109379794	109379794	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015011.1	+1	validated	p.R102W	1.000	313	0%	110	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
MYO16	23026	genome.wustl.edu	37	13	109610116	109610116	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015011.1	+1	validated	p.R647Q	1.000	136	0%	86	51.2%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO16	23026	genome.wustl.edu	37	13	109661382	109661382	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015011.1	+1	validated	p.L838F	1.000	188	0%	78	46.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO16	23026	genome.wustl.edu	37	13	109779740	109779740	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015011.1	+1	validated	p.S1276L	0.939	24	0%	20	45%	0	-	benign(0.018)	deleterious(0.05)	neutral(0.346)	NULL
MYO16	23026	genome.wustl.edu	37	13	109831917	109831917	+	Missense_Mutation	SNP	G	G	A	rs188457804	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015011.1	+1	validated	p.R1762Q	0.000	175	0%	80	36.2%	0	-	possibly_damaging(0.863)	deleterious(0)	deleterious(0.778)	NULL
COL4A1	1282	genome.wustl.edu	37	13	110835388	110835388	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001845.4	-1	reviewed	p.A683T	0.007	19	0%	12	33.3%	58	10.3%	benign(0.004)	tolerated(0.51)	neutral(0.009)	HMMPfam_Collagen
ING1	3621	genome.wustl.edu	37	13	111371953	111371953	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005537.3	+1	reviewed	p.A315T	0.976	11	0%	22	22.7%	57	40.3%	benign(0)	tolerated(0.58)	neutral(0.005)	NULL
ARHGEF7	8874	genome.wustl.edu	37	13	111896229	111896229	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113511.1	+1	reviewed	p.N278T	1.000	140	0%	44	40.9%	16	18.7%	benign(0.238)	deleterious(0.01)	neutral(0.430)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),superfamily_SH3-domain
TUBGCP3	10426	genome.wustl.edu	37	13	113170825	113170825	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006322.4	-1	provisional	p.R672Q	1.000	107	0%	81	40.7%	22	31.8%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Spc97_Spc98
TUBGCP3	10426	genome.wustl.edu	37	13	113173318	113173318	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006322.4	-1	provisional	p.D641N	1.000	185	0%	95	41.1%	21	42.8%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	HMMPfam_Spc97_Spc98
C13orf35	400165	genome.wustl.edu	37	13	113333848	113333848	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207440.1	+1	provisional	p.P52L	0.000	10	0%	11	63.6%	0	-	possibly_damaging(0.877)	-	-	NULL
ATP11A	23250	genome.wustl.edu	37	13	113439524	113439524	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032189.3	+1	reviewed	p.A39T	1.000	55	0%	55	34.5%	10	50%	benign(0.17)	tolerated(0.16)	neutral(0.075)	NULL
F10	2159	genome.wustl.edu	37	13	113803344	113803344	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000504.3	+1	reviewed	p.R327Q	0.001	20	0%	19	36.8%	0	-	probably_damaging(0.968)	tolerated(0.6)	neutral(0.414)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
F10	2159	genome.wustl.edu	37	13	113803457	113803457	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000504.3	+1	reviewed	p.G365R	1.000	12	0%	11	45.5%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
PCID2	55795	genome.wustl.edu	37	13	113854824	113854824	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127202.1	-1	validated	p.E15K	1.000	100	0%	45	44.4%	16	62.5%	benign(0.002)	tolerated(0.43)	neutral(0.013)	NULL
TFDP1	7027	genome.wustl.edu	37	13	114277538	114277538	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007111.4	+1	reviewed	p.P41	0.001	73	0%	53	34%	75	48%	-	-	-	NULL
TFDP1	7027	genome.wustl.edu	37	13	114287535	114287535	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007111.4	+1	reviewed	p.E137K	1.000	41	0%	40	52.5%	84	52.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_E2F_TDP,superfamily_SSF46785
POTEG	404785	genome.wustl.edu	37	14	19553822	19553822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005356.2	+1	validated	p.R136C	0.000	177	0%	148	25.7%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	superfamily_Ankyrin repeat
POTEG	404785	genome.wustl.edu	37	14	19574307	19574307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005356.2	+1	validated	p.P455L	0.000	507	0%	226	24.3%	0	-	probably_damaging(0.957)	tolerated(0.19)	neutral(0.450)	NULL
OR11H2	79334	genome.wustl.edu	37	14	20181452	20181452	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000334072	-1	known	p.P208	0.076	335	0%	128	28.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR4Q3	441669	genome.wustl.edu	37	14	20215665	20215665	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172194.1	+1	provisional	p.L27I	0.727	515	0%	145	46.9%	0	-	probably_damaging(0.998)	tolerated(0.33)	deleterious(0.498)	superfamily_SSF81321
OR4M1	441670	genome.wustl.edu	37	14	20249045	20249045	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005500.1	+1	provisional	p.A188	0.997	402	0%	174	44.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4N2	390429	genome.wustl.edu	37	14	20295622	20295622	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004723.1	+1	provisional	p.N5	0.019	221	0%	90	21.1%	0	-	-	-	-	superfamily_SSF81321
OR4K14	122740	genome.wustl.edu	37	14	20482529	20482529	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004712.1	-1	provisional	p.F275C	0.992	51	0%	30	66.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR4K13	390433	genome.wustl.edu	37	14	20502501	20502501	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004714.1	-1	provisional	p.R139	0.000	72	0%	34	41.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR4L1	122742	genome.wustl.edu	37	14	20528858	20528858	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004717.1	+1	provisional	p.I219V	0.232	339	0%	123	34.1%	0	-	benign(0)	tolerated(0.87)	neutral(0.001)	HMMPfam_7tm_1,superfamily_SSF81321
OR4L1	122742	genome.wustl.edu	37	14	20529009	20529009	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004717.1	+1	provisional	p.K269T	0.472	192	0%	56	41.1%	0	-	benign(0.025)	deleterious(0.04)	neutral(0.350)	HMMPfam_7tm_1,superfamily_SSF81321
OR11H4	390442	genome.wustl.edu	37	14	20711857	20711857	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004479.1	+1	provisional	p.R303C	0.996	145	0%	51	39.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Family A G protein-coupled receptor-like
CCNB1IP1	57820	genome.wustl.edu	37	14	20779835	20779835	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021178.3	-1	validated	p.R236	1.000	144	0%	97	40.2%	66	40.9%	-	-	-	NULL
PARP2	10038	genome.wustl.edu	37	14	20813188	20813188	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005484.3	+1	reviewed	p.K48N	0.665	183	0%	98	18.4%	20	40%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
PARP2	10038	genome.wustl.edu	37	14	20820469	20820469	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005484.3	+1	reviewed	p.Y201C	1.000	260	0%	141	45.4%	28	46.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TEP1	7011	genome.wustl.edu	37	14	20863739	20863739	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007110.4	-1	reviewed	p.R600	0.004	134	0%	98	41.8%	3	0%	-	-	-	HMMPfam_TROVE
TEP1	7011	genome.wustl.edu	37	14	20864865	20864865	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007110.4	-1	reviewed	p.A525V	1.000	56	0%	42	42.9%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_TROVE
OSGEP	55644	genome.wustl.edu	37	14	20916318	20916318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017807.2	-1	validated	p.R217W	0.993	208	0.5%	132	45.5%	58	31%	probably_damaging(0.953)	deleterious(0)	deleterious(0.841)	HMMPfam_Peptidase_M22,superfamily_SSF53067
RNASE10	338879	genome.wustl.edu	37	14	20979225	20979225	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012975.1	+1	provisional	p.K199Q	0.030	69	0%	49	40.8%	0	-	probably_damaging(0.986)	deleterious(0.02)	deleterious(0.818)	HMMPfam_RnaseA,HMMSmart_SM00092,superfamily_RNase A-like
RNASE9	390443	genome.wustl.edu	37	14	21024654	21024654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001673.3	-1	provisional	p.R192I	0.001	159	0%	66	48.5%	0	-	possibly_damaging(0.92)	deleterious(0.01)	deleterious(0.776)	NULL
RNASE9	390443	genome.wustl.edu	37	14	21024773	21024773	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001673.3	-1	provisional	p.A152	0.000	201	0%	78	44.9%	0	-	-	-	-	superfamily_RNase A-like
OR6S1	341799	genome.wustl.edu	37	14	21109828	21109828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001968.1	-1	provisional	p.S8I	0.985	33	0%	15	40%	0	-	possibly_damaging(0.948)	deleterious(0.03)	deleterious(0.756)	NULL
EDDM3A	10876	genome.wustl.edu	37	14	21215846	21215846	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006683.4	+1	validated	p.L36R	0.006	143	0%	67	38.8%	0	-	possibly_damaging(0.797)	tolerated(0.7)	neutral(0.301)	superfamily_RNaseA
EDDM3A	10876	genome.wustl.edu	37	14	21216048	21216048	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006683.4	+1	validated	p.L103	0.062	120	0%	48	39.6%	0	-	-	-	-	superfamily_RNaseA
EDDM3B	64184	genome.wustl.edu	37	14	21238527	21238527	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022360.4	+1	validated	p.W73*	0.082	155	0%	61	47.5%	0	-	-	-	-	superfamily_RNaseA
RNASE1	6035	genome.wustl.edu	37	14	21270187	21270187	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002933.4	-1	reviewed	p.V14A	0.004	29	0%	25	16%	20	0%	possibly_damaging(0.646)	tolerated(1)	neutral(0.227)	NULL
METTL17	64745	genome.wustl.edu	37	14	21463353	21463353	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029991.1	+1	validated	p.G302	0.990	288	0%	151	42.4%	43	30.2%	-	-	-	HMMPfam_Rsm22
RNASE7	84659	genome.wustl.edu	37	14	21511215	21511215	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032572.3	+1	validated	p.A22S	0.002	38	0%	29	51.7%	0	-	benign(0.005)	tolerated(0.17)	neutral(0.059)	NULL
RNASE7	84659	genome.wustl.edu	37	14	21511407	21511407	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032572.3	+1	validated	p.P86S	0.001	65	0%	41	65.9%	0	-	benign(0)	deleterious(0.01)	neutral(0.406)	HMMPfam_RnaseA,HMMSmart_SM00092,superfamily_RNase A-like
ARHGEF40	55701	genome.wustl.edu	37	14	21542278	21542278	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018071.3	+1	validated	p.R130Q	0.975	19	0%	13	46.2%	7	57.1%	probably_damaging(0.988)	tolerated(0.29)	neutral(0.467)	NULL
HNRNPC	3183	genome.wustl.edu	37	14	21681171	21681171	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077442.1	-1	reviewed	p.K170N	1.000	185	0%	61	34.4%	582	40.7%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
RPGRIP1	57096	genome.wustl.edu	37	14	21798506	21798506	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020366.3	+1	reviewed	p.H1066	0.007	279	0%	110	47.3%	0	-	-	-	-	NULL
SUPT16H	11198	genome.wustl.edu	37	14	21820963	21820963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007192.3	-1	reviewed	p.R1005C	1.000	185	0.5%	92	41.3%	71	46.4%	possibly_damaging(0.936)	deleterious(0.05)	deleterious(0.727)	NULL
CHD8	57680	genome.wustl.edu	37	14	21859717	21859717	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020920.3	-1	reviewed	p.T2045A	1.000	47	0%	18	50%	74	40.5%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_BRK,HMMSmart_SM00592
CHD8	57680	genome.wustl.edu	37	14	21859990	21859990	+	Splice_Site	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020920.3	-1	reviewed	e34+2	1.000	407	0%	206	43.2%	0	-	-	-	-	-
CHD8	57680	genome.wustl.edu	37	14	21868659	21868659	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020920.3	-1	reviewed	p.R1216C	1.000	104	0%	57	12.3%	17	35.2%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_P-loop containing nucleoside triphosphate hydrolases
CHD8	57680	genome.wustl.edu	37	14	21873401	21873401	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020920.3	-1	reviewed	p.R813C	1.000	169	0%	98	45.9%	14	35.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF2_N
METTL3	56339	genome.wustl.edu	37	14	21969242	21969242	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019852.3	-1	reviewed	p.S310Y	1.000	100	0%	30	16.7%	46	34.7%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
OR10G3	26533	genome.wustl.edu	37	14	22038083	22038083	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005465.1	-1	validated	p.T265A	0.940	60	0%	43	44.2%	0	-	benign(0.002)	tolerated(0.13)	neutral(0.253)	HMMPfam_7tm_1,superfamily_SSF81321
ABHD4	63874	genome.wustl.edu	37	14	23070609	23070609	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022060.2	+1	validated	p.R21C	1.000	58	0%	46	45.7%	25	52%	unknown(0)	deleterious(0.01)	-	NULL
LRP10	26020	genome.wustl.edu	37	14	23345402	23345402	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014045.3	+1	validated	p.T415	0.003	46	0%	43	27.9%	98	40.8%	-	-	-	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module
REM2	161253	genome.wustl.edu	37	14	23354209	23354209	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173527.2	+1	validated	p.E144K	0.984	15	0%	15	46.7%	2	100%	possibly_damaging(0.831)	tolerated(0.07)	deleterious(0.635)	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,superfamily_P-loop containing nucleoside triphosphate hydrolases
REM2	161253	genome.wustl.edu	37	14	23355347	23355347	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173527.2	+1	validated	p.R212W	0.993	14	0%	14	50%	7	57.1%	probably_damaging(0.999)	tolerated(0.17)	deleterious(0.549)	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
PRMT5	10419	genome.wustl.edu	37	14	23397378	23397378	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006109.3	-1	validated	p.R91H	0.990	113	0%	68	23.5%	56	17.8%	benign(0.004)	tolerated(0.16)	neutral(0.059)	NULL
SLC22A17	51310	genome.wustl.edu	37	14	23817804	23817804	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020372.2	-1	provisional	p.F201	1.000	30	0%	28	53.6%	6	33.3%	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
EFS	10278	genome.wustl.edu	37	14	23828094	23828094	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005864.2	-1	reviewed	p.P414	0.000	10	0%	17	29.4%	5	40%	-	-	-	NULL
EFS	10278	genome.wustl.edu	37	14	23829477	23829477	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005864.2	-1	reviewed	p.P104L	1.000	39	0%	54	42.6%	7	14.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CMTM5	116173	genome.wustl.edu	37	14	23847620	23847620	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138460.2	+1	reviewed	p.A63	0.021	96	0%	93	45.2%	0	-	-	-	-	HMMPfam_MARVEL
MYH7	4625	genome.wustl.edu	37	14	23885403	23885403	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000257.2	-1	reviewed	p.R1588H	1.000	111	0%	96	33.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_tail_1
MYH7	4625	genome.wustl.edu	37	14	23897768	23897768	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000257.2	-1	reviewed	p.E507K	1.000	192	0%	160	38.8%	0	-	benign(0.04)	deleterious(0.03)	neutral(0.367)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH7	4625	genome.wustl.edu	37	14	23902875	23902875	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000257.2	-1	reviewed	p.R23W	1.000	24	0%	20	40%	0	-	probably_damaging(0.986)	deleterious(0.01)	deleterious(0.840)	NULL
NGDN	25983	genome.wustl.edu	37	14	23946717	23946717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042635.1	+1	validated	p.Q292H	1.000	165	0%	103	43.7%	30	36.6%	probably_damaging(0.981)	tolerated(0.06)	deleterious(0.748)	NULL
ENSG00000246609	0	genome.wustl.edu	37	14	24035764	24035764	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000502153	+1	known	NULL	0.955	120	0%	92	45.7%	5	40%	-	-	-	-
DHRS4L1	728635	genome.wustl.edu	37	14	24518540	24518540	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001082488.1	+1	provisional	p.R241Q	0.000	325	0%	188	37.8%	4	25%	benign(0.002)	tolerated(0.7)	neutral(0.002)	superfamily_NAD(P)-binding Rossmann-fold domains
LRRC16B	90668	genome.wustl.edu	37	14	24529234	24529234	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138360.3	+1	validated	p.R642C	1.000	20	0%	15	33.3%	2	50%	unknown(0)	deleterious(0)	-	NULL
FITM1	161247	genome.wustl.edu	37	14	24601466	24601466	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203402.2	+1	validated	p.G105S	0.999	80	0%	66	42.4%	0	-	benign(0.236)	tolerated(0.53)	neutral(0.031)	HMMPfam_Scs3p
RNF31	55072	genome.wustl.edu	37	14	24619303	24619303	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017999.4	+1	validated	p.S281	0.000	35	0%	43	53.5%	15	46.6%	-	-	-	NULL
RNF31	55072	genome.wustl.edu	37	14	24620580	24620580	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017999.4	+1	validated	p.R577*	0.954	58	0%	51	43.1%	24	25%	-	-	-	NULL
RNF31	55072	genome.wustl.edu	37	14	24629127	24629127	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017999.4	+1	validated	p.A985V	1.000	31	0%	22	22.7%	36	72.2%	probably_damaging(0.998)	tolerated(1)	deleterious(0.474)	NULL
IRF9	10379	genome.wustl.edu	37	14	24632351	24632351	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006084.4	+1	validated	p.I119	0.000	70	0%	55	50.9%	23	43.4%	-	-	-	NULL
IRF9	10379	genome.wustl.edu	37	14	24633100	24633100	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006084.4	+1	validated	p.A170V	0.001	28	0%	26	53.8%	13	38.4%	benign(0.02)	tolerated(0.5)	neutral(0.011)	NULL
GMPR2	51292	genome.wustl.edu	37	14	24704989	24704989	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016576.3	+1	validated	p.W103S	1.000	284	0%	172	42.4%	36	47.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IMPDH,superfamily_Inosine monophosphate dehydrogenase (IMPDH)
TINF2	26277	genome.wustl.edu	37	14	24711353	24711353	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099274.1	-1	reviewed	p.K62N	0.998	26	0%	30	26.7%	21	14.2%	benign(0.009)	deleterious(0.01)	neutral(0.406)	NULL
TGM1	7051	genome.wustl.edu	37	14	24728341	24728341	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000359.2	-1	reviewed	p.R367C	0.517	20	0%	26	69.2%	3	33.3%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_SSF54001
RABGGTA	5875	genome.wustl.edu	37	14	24735637	24735637	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004581.3	-1	validated	p.N518	1.000	46	0%	46	34.8%	43	39.5%	-	-	-	superfamily_SSF52058
RABGGTA	5875	genome.wustl.edu	37	14	24736874	24736874	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004581.3	-1	validated	p.A449T	0.979	27	0%	18	33.3%	57	50.8%	benign(0.001)	tolerated(0.21)	neutral(0.044)	superfamily_SSF52058
ADCY4	196883	genome.wustl.edu	37	14	24788594	24788594	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139247.2	-1	reviewed	p.G928S	0.993	114	0%	94	54.3%	3	0%	possibly_damaging(0.939)	deleterious(0.01)	deleterious(0.790)	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
ADCY4	196883	genome.wustl.edu	37	14	24792648	24792648	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139247.2	-1	reviewed	p.T687A	0.316	76	0%	68	29.4%	6	16.6%	benign(0)	tolerated(0.38)	neutral(0.018)	NULL
NYNRIN	57523	genome.wustl.edu	37	14	24877150	24877150	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025081.2	+1	validated	p.L92I	0.451	21	0%	22	59.1%	10	60%	possibly_damaging(0.945)	deleterious(0.01)	deleterious(0.795)	NULL
KHNYN	23351	genome.wustl.edu	37	14	24905652	24905652	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015299.2	+1	validated	p.R582*	0.945	81	0%	64	26.6%	31	16.1%	-	-	-	NULL
NOVA1	4857	genome.wustl.edu	37	14	26918116	26918116	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002515.2	-1	reviewed	p.G191	1.000	139	0%	93	43%	0	-	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
NOVA1	4857	genome.wustl.edu	37	14	27064628	27064628	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002515.2	-1	reviewed	p.D90Y	1.000	361	0%	230	43.9%	0	-	unknown(0)	deleterious(0)	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
PRKD1	5587	genome.wustl.edu	37	14	30100089	30100089	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002742.2	-1	validated	p.S511P	0.436	197	0%	67	14.9%	11	45.4%	benign(0)	tolerated(0.19)	neutral(0.050)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
PRKD1	5587	genome.wustl.edu	37	14	30105519	30105519	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002742.2	-1	validated	p.H389	0.006	159	0%	80	50%	8	50%	-	-	-	NULL
G2E3	55632	genome.wustl.edu	37	14	31055950	31055950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017769.3	+1	validated	p.D22N	1.000	150	0%	38	34.2%	3	66.6%	benign(0.037)	tolerated(0.41)	neutral(0.017)	NULL
G2E3	55632	genome.wustl.edu	37	14	31061585	31061585	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017769.3	+1	validated	p.C98	1.000	344	0%	119	36.1%	4	75%	-	-	-	HMMSmart_PHD,PatternScan_ZF_PHD_1
G2E3	55632	genome.wustl.edu	37	14	31061590	31061590	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017769.3	+1	validated	p.R100Q	1.000	342	0%	121	49.6%	4	25%	possibly_damaging(0.855)	tolerated(0.21)	neutral(0.374)	HMMSmart_PHD,PatternScan_ZF_PHD_1
STRN3	29966	genome.wustl.edu	37	14	31404447	31404447	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083893.1	-1	validated	p.E304*	1.000	318	0.3%	162	48.1%	10	20%	-	-	-	NULL
HEATR5A	25938	genome.wustl.edu	37	14	31813183	31813183	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015473.2	-1	validated	p.A756	0.982	91	0%	38	52.6%	9	0%	-	-	-	superfamily_ARM repeat
C14orf126	112487	genome.wustl.edu	37	14	31917608	31917608	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080664.2	-1	validated	p.V78	0.959	327	0%	173	41%	13	53.8%	-	-	-	HMMPfam_Tyr_Deacylase,superfamily_DTyrtRNA_deacyls
ARHGAP5	394	genome.wustl.edu	37	14	32563438	32563438	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001030055.1	+1	reviewed	p.R1188I	1.000	215	0%	75	50.7%	7	57.1%	benign(0.062)	deleterious(0)	neutral(0.449)	NULL
AKAP6	9472	genome.wustl.edu	37	14	33004863	33004863	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004274.4	+1	reviewed	p.D143G	1.000	56	0%	27	51.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AKAP6	9472	genome.wustl.edu	37	14	33292209	33292209	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004274.4	+1	reviewed	p.S1730	0.114	78	0%	39	17.9%	1	0%	-	-	-	NULL
NPAS3	64067	genome.wustl.edu	37	14	33684531	33684531	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173159.2	+1	reviewed	p.R65Q	1.000	151	0%	59	47.5%	6	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
BAZ1A	11177	genome.wustl.edu	37	14	35243583	35243583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013448.2	-1	validated	p.L983I	1.000	348	0%	123	39%	14	50%	benign(0.024)	tolerated(1)	neutral(0.001)	NULL
RALGAPA1	253959	genome.wustl.edu	37	14	36096435	36096435	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194301.2	-1	provisional	p.E1734*	1.000	458	0%	206	45.6%	3	66.6%	-	-	-	superfamily_SSF111347
RALGAPA1	253959	genome.wustl.edu	37	14	36097066	36097066	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194301.2	-1	provisional	p.S1523	0.995	98	0%	65	27.7%	4	50%	-	-	-	NULL
RALGAPA1	253959	genome.wustl.edu	37	14	36103902	36103902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194301.2	-1	provisional	p.S1452N	1.000	164	0%	79	11.4%	2	0%	possibly_damaging(0.479)	tolerated(0.33)	neutral(0.182)	NULL
RALGAPA1	253959	genome.wustl.edu	37	14	36143908	36143908	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194301.2	-1	provisional	p.S1038	1.000	69	0%	36	52.8%	5	60%	-	-	-	NULL
RALGAPA1	253959	genome.wustl.edu	37	14	36230194	36230194	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194301.2	-1	provisional	p.R130C	1.000	177	0.6%	66	50%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PAX9	5083	genome.wustl.edu	37	14	37145483	37145483	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006194.3	+1	reviewed	p.S284	0.993	89	0%	55	49.1%	16	50%	unknown(0)	-	-	NULL
PAX9	5083	genome.wustl.edu	37	14	37145591	37145591	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006194.3	+1	reviewed	p.S320	0.997	48	0%	33	51.5%	15	60%	-	-	-	NULL
SEC23A	10484	genome.wustl.edu	37	14	39536499	39536499	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006364.2	-1	reviewed	p.G369R	1.000	191	0%	87	27.6%	28	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sec23_trunk,superfamily_SSF53300,superfamily_SSF81995
GEMIN2	8487	genome.wustl.edu	37	14	39597505	39597505	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003616.2	+1	reviewed	p.E196*	1.000	481	0%	217	15.2%	5	0%	-	-	-	HMMPfam_SIP1
PNN	5411	genome.wustl.edu	37	14	39648300	39648300	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002687.3	+1	validated	p.K168	0.999	215	0%	126	48.4%	56	48.2%	-	-	-	HMMPfam_Pinin_SDK_memA
LRFN5	145581	genome.wustl.edu	37	14	42356332	42356332	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152447.3	+1	validated	p.E168D	1.000	158	0%	71	42.3%	0	-	benign(0.429)	tolerated(0.54)	neutral(0.147)	HMMPfam_LRR_1,superfamily_SSF52058
FSCB	84075	genome.wustl.edu	37	14	44973760	44973760	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032135.3	-1	validated	p.E811*	0.010	195	0%	72	33.3%	0	-	-	-	-	NULL
FAM179B	23116	genome.wustl.edu	37	14	45433477	45433477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015091.2	+1	validated	p.R618I	1.000	77	0%	45	42.2%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_ARM repeat
FANCM	57697	genome.wustl.edu	37	14	45605329	45605329	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020937.2	+1	reviewed	p.P32L	0.986	8	0.000	10	0.500	3	33.3%	benign(0.244)	deleterious(0)	deleterious(0.469)	NULL
FANCM	57697	genome.wustl.edu	37	14	45645454	45645454	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020937.2	+1	reviewed	p.A1166V	0.000	240	0%	90	43.3%	2	50%	possibly_damaging(0.8)	tolerated(1)	neutral(0.301)	NULL
FANCM	57697	genome.wustl.edu	37	14	45667953	45667953	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020937.2	+1	reviewed	p.T1941	0.928	188	0%	99	37.4%	7	28.5%	benign(0)	tolerated(0.61)	neutral(0.004)	superfamily_Restriction endonuclease-like
MIS18BP1	55320	genome.wustl.edu	37	14	45693531	45693531	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018353.4	-1	validated	p.K753N	0.367	397	0%	163	50.3%	7	28.5%	possibly_damaging(0.586)	deleterious(0)	deleterious(0.647)	NULL
MDGA2	161357	genome.wustl.edu	37	14	47530477	47530477	+	Silent	SNP	G	G	A	rs137900737	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113498.1	-1	validated	p.I431	0.996	132	0%	45	48.9%	0	-	-	-	-	superfamily_SSF48726
DNAAF2	55172	genome.wustl.edu	37	14	50100137	50100137	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018139.2	-1	reviewed	p.E577D	0.708	154	0%	106	40.6%	13	30.7%	possibly_damaging(0.579)	tolerated(0.61)	neutral(0.203)	NULL
KLHDC2	23588	genome.wustl.edu	37	14	50249147	50249147	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014315.2	+1	validated	p.A339V	1.000	342	0%	161	43.5%	72	43%	probably_damaging(0.994)	tolerated(0.09)	deleterious(0.748)	superfamily_Galactose oxidase central domain
NEMF	9147	genome.wustl.edu	37	14	50267233	50267233	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004713.3	-1	validated	p.K759N	0.129	458	0%	245	43.7%	12	16.6%	benign(0)	tolerated(0.5)	neutral(0.010)	NULL
NEMF	9147	genome.wustl.edu	37	14	50298052	50298052	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004713.3	-1	validated	p.E304*	1.000	800	0%	353	38%	3	33.3%	-	-	-	NULL
NEMF	9147	genome.wustl.edu	37	14	50304857	50304857	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004713.3	-1	validated	p.P192S	1.000	148	0%	106	35.8%	15	60%	benign(0.023)	tolerated(0.34)	neutral(0.024)	NULL
C14orf182	283551	genome.wustl.edu	37	14	50472409	50472409	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012706.1	-1	validated	p.E37K	0.012	185	0%	144	39.6%	0	-	possibly_damaging(0.615)	-	-	NULL
MAP4K5	11183	genome.wustl.edu	37	14	50904246	50904246	+	Silent	SNP	G	G	A	rs191525698	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006575.3	-1	reviewed	p.F610	0.994	346	0%	92	44.6%	27	40.7%	-	-	-	HMMPfam_CNH,HMMSmart_SM00036
MAP4K5	11183	genome.wustl.edu	37	14	50941832	50941832	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006575.3	-1	reviewed	p.I169V	1.000	404	0%	200	41%	20	45%	benign(0)	tolerated(0.31)	neutral(0.027)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ABHD12B	145447	genome.wustl.edu	37	14	51345506	51345506	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000337334	+1	known	p.K92N	0.758	171	0.6%	78	42.3%	1	0%	probably_damaging(0.999)	-	-	NULL
PYGL	5836	genome.wustl.edu	37	14	51376642	51376642	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002863.4	-1	reviewed	p.I716M	1.000	152	0%	108	30.6%	112	49.1%	benign(0.003)	deleterious(0)	neutral(0.445)	HMMPfam_Phosphorylase,superfamily_SSF53756
ENSG00000251771	0	genome.wustl.edu	37	14	52071561	52071561	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000515962	-1	novel	NULL	0.165	31	0.000	9	0.444	0	-	-	-	-	-
FRMD6	122786	genome.wustl.edu	37	14	52169305	52169305	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042481.1	+1	validated	p.S116G	1.000	349	0.3%	85	14.1%	3	33.3%	benign(0)	tolerated(0.15)	neutral(0.241)	HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41
ERO1L	30001	genome.wustl.edu	37	14	53119836	53119836	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014584.1	-1	provisional	p.Q336*	0.620	221	0%	65	44.6%	23	13%	-	-	-	HMMPfam_ERO1,superfamily_ERO1
STYX	6815	genome.wustl.edu	37	14	53237817	53237817	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130701.1	+1	validated	p.N222T	1.000	286	0%	92	44.6%	22	54.5%	possibly_damaging(0.454)	deleterious(0.01)	deleterious(0.554)	NULL
FERMT2	10979	genome.wustl.edu	37	14	53331496	53331496	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134999.1	-1	validated	p.G450D	1.000	357	0%	147	40.1%	28	50%	possibly_damaging(0.769)	tolerated(0.06)	deleterious(0.608)	HMMPfam_PH,HMMSmart_PH,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41,superfamily_SSF50729
BMP4	652	genome.wustl.edu	37	14	54417210	54417210	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001202.3	-1	reviewed	p.R256Q	1.000	14	0%	23	39.1%	8	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TGFb_propeptide
CNIH	10175	genome.wustl.edu	37	14	54897091	54897091	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005776.2	-1	validated	p.G99*	1.000	266	0%	123	43.9%	78	16.6%	-	-	-	HMMPfam_Cornichon
SAMD4A	23034	genome.wustl.edu	37	14	55215638	55215638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015589.4	+1	validated	p.A361V	1.000	35	0%	30	53.3%	2	100%	probably_damaging(0.955)	tolerated(0.13)	deleterious(0.651)	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
WDHD1	11169	genome.wustl.edu	37	14	55429826	55429826	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007086.2	-1	reviewed	p.A792D	1.000	214	0.9%	101	39.6%	7	71.4%	possibly_damaging(0.916)	tolerated(0.08)	deleterious(0.667)	superfamily_WD40_like
WDHD1	11169	genome.wustl.edu	37	14	55453891	55453891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007086.2	-1	reviewed	p.E581K	1.000	136	0%	56	44.6%	9	44.4%	benign(0.058)	tolerated(0.29)	neutral(0.033)	superfamily_WD40_like
FBXO34	55030	genome.wustl.edu	37	14	55818564	55818564	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017943.3	+1	validated	p.P486S	0.354	102	0%	54	48.1%	15	26.6%	benign(0.002)	tolerated(1)	-	NULL
NAA30	122830	genome.wustl.edu	37	14	57876173	57876173	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001011713.2	+1	validated	p.R343M	1.000	315	0%	100	42%	7	42.8%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Acyl-CoA N-acyltransferases (Nat)
SLC35F4	341880	genome.wustl.edu	37	14	58060744	58060744	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080455.1	-1	provisional	p.E104K	0.982	121	0%	61	47.5%	0	-	benign(0.243)	tolerated(0.1)	neutral(0.311)	NULL
ARID4A	5926	genome.wustl.edu	37	14	58771701	58771701	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002892.3	+1	reviewed	p.D53Y	1.000	323	0%	136	41.2%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KIAA0586	9786	genome.wustl.edu	37	14	58927740	58927740	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014749.3	+1	validated	p.D565Y	0.999	276	0%	93	40.9%	9	33.3%	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	NULL
DACT1	51339	genome.wustl.edu	37	14	59112127	59112127	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016651.5	+1	validated	p.N262	1.000	122	0%	79	34.2%	8	12.5%	-	-	-	NULL
DAAM1	23002	genome.wustl.edu	37	14	59789674	59789674	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014992.1	+1	reviewed	p.D169Y	1.000	142	0%	82	40.2%	15	20%	unknown(0)	deleterious(0.01)	-	HMMPfam_Drf_GBD
DAAM1	23002	genome.wustl.edu	37	14	59790858	59790858	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014992.1	+1	reviewed	p.D263N	1.000	436	0.2%	181	40.3%	19	42.1%	unknown(0)	tolerated(0.24)	-	HMMPfam_Drf_FH3
DAAM1	23002	genome.wustl.edu	37	14	59792771	59792771	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014992.1	+1	reviewed	p.L384	1.000	125	0%	77	51.9%	27	40.7%	-	-	-	HMMPfam_Drf_FH3
C14orf149	112849	genome.wustl.edu	37	14	59945931	59945931	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144581.1	-1	provisional	p.A216V	1.000	82	0%	59	44.1%	10	10%	benign(0.031)	deleterious(0.01)	neutral(0.407)	HMMPfam_Pro_racemase,superfamily_Diaminopimelate epimerase-like
C14orf149	112849	genome.wustl.edu	37	14	59946069	59946069	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144581.1	-1	provisional	p.D170G	1.000	86	0%	54	14.8%	3	0%	benign(0.271)	deleterious(0.03)	neutral(0.394)	HMMPfam_Pro_racemase,superfamily_Diaminopimelate epimerase-like
JKAMP	51528	genome.wustl.edu	37	14	59953512	59953512	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016475.3	+1	validated	p.G29E	1.000	558	0%	282	35.5%	23	30.4%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMPfam_DUF766
JKAMP	51528	genome.wustl.edu	37	14	59961837	59961837	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016475.3	+1	validated	p.R118H	1.000	441	0.2%	210	48.1%	41	53.6%	benign(0.016)	tolerated(0.49)	neutral(0.011)	HMMPfam_DUF766
C14orf38	729665	genome.wustl.edu	37	14	60039508	60039508	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000281581	-1	known	p.I89	0.883	580	0.2%	283	48.8%	0	-	-	-	-	NULL
LOC100289241	100289241	genome.wustl.edu	37	14	60976116	60976116	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343304.1	-1	model	p.I59	1.000	7	0.000	6	0.667	0	-	-	-	-	NULL
ENSG00000184902	0	genome.wustl.edu	37	14	61247047	61247047	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000331888	+1	known	p.E77D	1.000	396	0%	203	45.3%	0	-	-	-	-	NULL
HIF1A	3091	genome.wustl.edu	37	14	62194334	62194334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001530.3	+1	validated	p.R245Q	1.000	147	0.7%	60	35%	91	43.9%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain)
HIF1A	3091	genome.wustl.edu	37	14	62211492	62211492	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001530.3	+1	validated	p.K721N	1.000	175	0%	68	55.9%	144	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HIF1A	3091	genome.wustl.edu	37	14	62212433	62212433	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001530.3	+1	validated	p.D743N	0.911	275	0%	159	44%	152	35.5%	possibly_damaging(0.922)	tolerated(0.13)	deleterious(0.624)	NULL
SNAPC1	6617	genome.wustl.edu	37	14	62233995	62233995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003082.3	+1	validated	p.Q118H	0.990	221	0%	133	45.9%	8	25%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMPfam_SNAPc_SNAP43
KCNH5	27133	genome.wustl.edu	37	14	63447745	63447745	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139318.3	-1	reviewed	p.V263I	1.000	141	0%	59	42.4%	0	-	possibly_damaging(0.917)	tolerated(0.35)	neutral(0.389)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
PPP2R5E	5529	genome.wustl.edu	37	14	63920492	63920492	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006246.2	-1	reviewed	p.R90H	1.000	294	0%	162	47.5%	20	45%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_B56,superfamily_ARM repeat
SYNE2	23224	genome.wustl.edu	37	14	64421548	64421548	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182914.2	+1	reviewed	p.K234N	0.016	287	0.3%	118	44.9%	9	55.5%	probably_damaging(0.978)	-	-	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology
SYNE2	23224	genome.wustl.edu	37	14	64461780	64461780	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182914.2	+1	reviewed	p.S934P	0.987	214	0%	59	33.9%	4	75%	probably_damaging(0.99)	-	-	NULL
SYNE2	23224	genome.wustl.edu	37	14	64522810	64522810	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182914.2	+1	reviewed	p.R3298Q	0.092	99	0%	61	45.9%	8	25%	benign(0.282)	-	-	superfamily_Spectrin
ZBTB1	22890	genome.wustl.edu	37	14	64989717	64989717	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123329.1	+1	validated	p.E499K	0.996	192	0%	88	36.4%	17	41.1%	possibly_damaging(0.475)	deleterious(0.03)	deleterious(0.521)	NULL
HSPA2	3306	genome.wustl.edu	37	14	65008734	65008734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021979.3	+1	validated	p.E389D	1.000	9	0.000	10	0.500	15	20%	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_HSP70,superfamily_SSF100920
PLEKHG3	26030	genome.wustl.edu	37	14	65198173	65198173	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015549.1	+1	validated	p.R259H	1.000	49	0%	33	51.5%	20	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
SPTB	6710	genome.wustl.edu	37	14	65253154	65253154	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024858.2	-1	reviewed	p.A1177T	1.000	21	0%	22	36.4%	0	-	benign(0.109)	tolerated(0.17)	neutral(0.068)	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
SPTB	6710	genome.wustl.edu	37	14	65262277	65262277	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024858.2	-1	reviewed	p.Y474	0.580	14	0%	23	21.7%	1	100%	-	-	-	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
MAX	4149	genome.wustl.edu	37	14	65544747	65544747	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002382.3	-1	reviewed	p.R60Q	1.000	271	0%	190	48.9%	61	44.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
MPP5	64398	genome.wustl.edu	37	14	67779415	67779415	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022474.2	+1	validated	p.G405R	1.000	208	0%	102	50%	8	50%	probably_damaging(0.992)	deleterious(0.04)	deleterious(0.796)	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2
MPP5	64398	genome.wustl.edu	37	14	67799567	67799567	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022474.2	+1	validated	p.T641M	0.999	158	0%	68	26.5%	10	30%	benign(0.008)	tolerated(0.36)	neutral(0.020)	HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
PLEKHH1	57475	genome.wustl.edu	37	14	68045266	68045266	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020715.2	+1	validated	p.A923T	1.000	24	0%	18	38.9%	13	61.5%	possibly_damaging(0.872)	deleterious(0.02)	deleterious(0.722)	HMMPfam_MyTH4,HMMSmart_SM00139
PLEKHH1	57475	genome.wustl.edu	37	14	68048887	68048887	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020715.2	+1	validated	p.N1129S	1.000	48	0%	41	46.3%	7	42.8%	benign(0.022)	tolerated(0.9)	neutral(0.001)	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
PIGH	5283	genome.wustl.edu	37	14	68060483	68060483	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004569.3	-1	reviewed	p.V123I	1.000	147	0%	74	37.8%	18	38.8%	benign(0.007)	tolerated(0.35)	neutral(0.021)	HMMPfam_PIG-H
VTI1B	10490	genome.wustl.edu	37	14	68126447	68126447	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006370.2	-1	validated	e3+1	1.000	99	0%	73	35.6%	0	-	-	-	-	-
RDH12	145226	genome.wustl.edu	37	14	68191275	68191275	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152443.2	+1	reviewed	p.G52C	1.000	239	0%	168	39.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
ZFYVE26	23503	genome.wustl.edu	37	14	68220452	68220452	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015346.3	-1	reviewed	p.G2387D	1.000	154	0%	77	31.2%	9	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZFYVE26	23503	genome.wustl.edu	37	14	68221958	68221958	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015346.3	-1	reviewed	p.R2266W	1.000	185	0%	109	37.6%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ACTN1	87	genome.wustl.edu	37	14	69392303	69392303	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130004.1	-1	reviewed	p.K64N	1.000	42	0%	39	48.7%	140	42.8%	benign(0.009)	tolerated(0.6)	neutral(0.005)	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology
EXD2	55218	genome.wustl.edu	37	14	69697307	69697307	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018199.2	+1	provisional	p.E112*	0.998	232	0%	150	48.7%	10	10%	-	-	-	HMMPfam_3_5_exonuc,superfamily_RNaseH_fold
GALNTL1	57452	genome.wustl.edu	37	14	69791495	69791495	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020692.2	+1	validated	p.R141H	1.000	45	0%	34	35.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
SLC8A3	6547	genome.wustl.edu	37	14	70527551	70527551	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183002.1	-1	reviewed	e2+2	1.000	347	0%	186	46.8%	0	-	-	-	-	-
SLC8A3	6547	genome.wustl.edu	37	14	70635054	70635054	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183002.1	-1	reviewed	p.R29Q	1.000	45	0%	14	64.3%	0	-	benign(0)	tolerated(0.62)	neutral(0.004)	NULL
ADAM21	8747	genome.wustl.edu	37	14	70925425	70925425	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003813.2	+1	reviewed	p.I403	0.000	192	0%	81	40.7%	0	-	-	-	-	NULL
ADAM21	8747	genome.wustl.edu	37	14	70925547	70925547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003813.2	+1	reviewed	p.A444V	0.168	93	0%	43	37.2%	0	-	possibly_damaging(0.943)	deleterious(0)	deleterious(0.832)	HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin)
ADAM21	8747	genome.wustl.edu	37	14	70925576	70925576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003813.2	+1	reviewed	p.D454Y	0.973	80	0%	40	45%	0	-	benign(0.407)	tolerated(0.16)	neutral(0.191)	HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1
ADAM20	8748	genome.wustl.edu	37	14	70991044	70991044	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003814.4	-1	reviewed	p.E194A	1.000	100	0%	40	55%	1	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Pep_M12B_propep
TTC9	23508	genome.wustl.edu	37	14	71134409	71134409	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015351.1	+1	reviewed	p.D179Y	1.000	159	0%	89	47.2%	18	61.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
MAP3K9	4293	genome.wustl.edu	37	14	71199829	71199829	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033141.2	-1	validated	p.L767M	1.000	8	0.000	16	0.500	3	33.3%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
PCNX	22990	genome.wustl.edu	37	14	71434932	71434932	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014982.2	+1	validated	p.S162	1.000	434	0%	135	23%	3	0%	-	-	-	NULL
PCNX	22990	genome.wustl.edu	37	14	71444033	71444033	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014982.2	+1	validated	p.E327*	1.000	156	0.6%	77	49.4%	2	0%	-	-	-	NULL
PCNX	22990	genome.wustl.edu	37	14	71444272	71444272	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014982.2	+1	validated	p.S406R	1.000	71	0%	31	38.7%	11	45.4%	unknown(0)	deleterious(0.01)	-	NULL
PCNX	22990	genome.wustl.edu	37	14	71514568	71514568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014982.2	+1	validated	p.R1402Q	1.000	441	0.7%	193	43%	7	71.4%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	NULL
SIPA1L1	26037	genome.wustl.edu	37	14	72176348	72176348	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015556.1	+1	provisional	p.T1413I	0.999	54	0%	27	37%	29	48.2%	benign(0.002)	tolerated(0.08)	neutral(0.300)	NULL
SIPA1L1	26037	genome.wustl.edu	37	14	72196849	72196849	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015556.1	+1	provisional	p.S1585	0.781	89	1.1%	60	41.7%	38	50%	-	-	-	NULL
DPF3	8110	genome.wustl.edu	37	14	73137874	73137874	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012074.3	-1	provisional	p.S348	0.835	57	0%	31	19.4%	0	-	-	-	-	NULL
RBM25	58517	genome.wustl.edu	37	14	73544218	73544218	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021239.2	+1	validated	p.D100Y	1.000	306	0%	152	42.8%	19	57.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
RBM25	58517	genome.wustl.edu	37	14	73570131	73570131	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021239.2	+1	validated	p.R367C	1.000	95	0%	67	49.3%	52	65.3%	unknown(0)	deleterious(0.01)	-	superfamily_RNA-binding domain RBD
RBM25	58517	genome.wustl.edu	37	14	73577664	73577664	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021239.2	+1	validated	p.E606	0.991	72	0%	54	42.6%	52	44.2%	-	-	-	NULL
RBM25	58517	genome.wustl.edu	37	14	73586487	73586487	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021239.2	+1	validated	p.A836S	1.000	515	0%	260	38.1%	18	55.5%	unknown(0)	deleterious(0)	-	HMMPfam_PWI,HMMSmart_SM00311,superfamily_PWI domain
PSEN1	5663	genome.wustl.edu	37	14	73673138	73673138	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000021.3	+1	reviewed	p.A305T	1.000	225	0%	149	10.7%	33	24.2%	benign(0)	tolerated(0.31)	neutral(0.027)	HMMPfam_Presenilin,HMMSmart_SM00730
PSEN1	5663	genome.wustl.edu	37	14	73685880	73685880	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000021.3	+1	reviewed	p.K429N	1.000	445	0%	234	47.4%	44	40.9%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Presenilin,HMMSmart_SM00730
NUMB	8650	genome.wustl.edu	37	14	73763985	73763985	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005743.1	-1	reviewed	p.K81N	1.000	350	0.3%	143	39.2%	16	37.5%	possibly_damaging(0.863)	deleterious(0.01)	deleterious(0.739)	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
HEATR4	399671	genome.wustl.edu	37	14	73964872	73964872	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203309.1	-1	provisional	p.D798N	0.479	104	0%	71	45.1%	0	-	benign(0)	tolerated(0.1)	neutral(0.286)	superfamily_ARM-type_fold
HEATR4	399671	genome.wustl.edu	37	14	73987610	73987610	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203309.1	-1	provisional	p.A292S	0.988	151	0%	107	41.1%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
ACOT6	641372	genome.wustl.edu	37	14	74086504	74086504	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037162.1	+1	validated	p.H195	0.994	66	0%	22	31.8%	0	-	-	-	-	HMMPfam_BAAT_C,superfamily_SSF53474
ALDH6A1	4329	genome.wustl.edu	37	14	74538914	74538914	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005589.2	-1	reviewed	p.E114*	1.000	121	0%	42	38.1%	19	10.5%	-	-	-	HMMPfam_Aldedh,superfamily_ALDH-like
LTBP2	4053	genome.wustl.edu	37	14	74968224	74968224	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000428.2	-1	reviewed	p.R1747H	1.000	22	0%	19	36.8%	4	25%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
LTBP2	4053	genome.wustl.edu	37	14	74970012	74970012	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000428.2	-1	reviewed	p.R1600C	0.939	29	0%	43	53.5%	4	25%	possibly_damaging(0.532)	tolerated(0.12)	neutral(0.441)	HMMPfam_TB,superfamily_TB module/8-cys domain
LTBP2	4053	genome.wustl.edu	37	14	74976539	74976539	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000428.2	-1	reviewed	p.A1059T	0.819	45	0%	25	48%	5	0%	benign(0.001)	tolerated(0.58)	neutral(0.005)	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Growth factor receptor domain,HMMPfam_EGF_CA,PatternScan_EGF_CA
LTBP2	4053	genome.wustl.edu	37	14	75022360	75022360	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000428.2	-1	reviewed	p.Q289H	1.000	13	0%	20	50%	2	0%	benign(0)	deleterious(0)	neutral(0.445)	NULL
DLST	1743	genome.wustl.edu	37	14	75359606	75359606	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001933.4	+1	validated	p.A171V	0.039	36	0%	27	44.4%	66	45.4%	benign(0.003)	tolerated(0.25)	neutral(0.037)	NULL
ZC2HC1C	79696	genome.wustl.edu	37	14	75537605	75537605	+	Missense_Mutation	SNP	C	C	T	rs150713060	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024643.2	+1	validated	p.S110L	0.005	131	0.8%	67	46.3%	2	50%	benign(0.001)	tolerated(0.16)	neutral(0.059)	NULL
ZC2HC1C	79696	genome.wustl.edu	37	14	75538582	75538582	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024643.2	+1	validated	p.Y436H	1.000	25	0%	13	46.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NEK9	91754	genome.wustl.edu	37	14	75573211	75573211	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033116.4	-1	validated	p.E508K	1.000	95	0%	84	48.8%	16	25%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	HMMPfam_RCC1,superfamily_RCC1/BLIP-II
ENSG00000119660	0	genome.wustl.edu	37	14	75759031	75759031	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000238638	-1	known	p.M60I	0.001	8	0.000	12	0.417	0	-	benign(0.001)	tolerated(0.3)	neutral(0.029)	NULL
FLVCR2	55640	genome.wustl.edu	37	14	76045533	76045533	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017791.2	+1	validated	p.E73A	0.000	47	0%	52	34.6%	1	0%	benign(0.056)	tolerated(0.11)	neutral(0.275)	superfamily_MFS_gen_substrate_transporter
FLVCR2	55640	genome.wustl.edu	37	14	76088480	76088480	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017791.2	+1	validated	p.R243Q	0.000	319	0.6%	132	49.2%	2	0%	benign(0)	tolerated(0.58)	neutral(0.005)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
FLVCR2	55640	genome.wustl.edu	37	14	76100017	76100017	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017791.2	+1	validated	p.R333H	1.000	250	0%	127	41.7%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
TTLL5	23093	genome.wustl.edu	37	14	76147918	76147918	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015072.4	+1	reviewed	p.R71Q	1.000	297	0%	98	57.1%	14	35.7%	benign(0.209)	tolerated(0.49)	neutral(0.031)	NULL
TTLL5	23093	genome.wustl.edu	37	14	76149960	76149960	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015072.4	+1	reviewed	p.R111H	1.000	196	0%	94	35.1%	10	60%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	HMMPfam_TTL
TTLL5	23093	genome.wustl.edu	37	14	76184216	76184216	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015072.4	+1	reviewed	p.V251	1.000	80	0%	31	19.4%	12	25%	-	-	-	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like
TTLL5	23093	genome.wustl.edu	37	14	76238150	76238150	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015072.4	+1	reviewed	p.G697S	0.948	123	0%	48	41.7%	10	70%	benign(0.001)	tolerated(0.37)	neutral(0.019)	NULL
TGFB3	7043	genome.wustl.edu	37	14	76446944	76446944	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003239.2	-1	reviewed	p.S98L	1.000	135	0%	135	38.5%	4	25%	benign(0.205)	tolerated(0.07)	neutral(0.339)	HMMPfam_TGFb_propeptide
IFT43	112752	genome.wustl.edu	37	14	76542990	76542990	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052873.2	+1	validated	p.K89T	0.000	76	0%	41	43.9%	3	100%	benign(0)	tolerated(0.14)	neutral(0.249)	NULL
ESRRB	2103	genome.wustl.edu	37	14	76906045	76906045	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004452.3	+1	reviewed	p.V117M	1.000	18	0%	18	38.9%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_ZnF_C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_SSF57716
ANGEL1	23357	genome.wustl.edu	37	14	77275817	77275817	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015305.3	-1	validated	p.E78D	0.989	29	0%	30	30%	5	20%	benign(0)	tolerated(0.18)	neutral(0.056)	NULL
C14orf166B	145497	genome.wustl.edu	37	14	77294867	77294867	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000216453	+1	known	p.R65W	0.000	6	0.000	11	0.455	0	-	unknown(0)	-	-	NULL
IRF2BPL	64207	genome.wustl.edu	37	14	77491830	77491830	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024496.2	-1	validated	p.S769L	1.000	16	0%	23	43.5%	72	41.6%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
IRF2BPL	64207	genome.wustl.edu	37	14	77493003	77493003	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024496.2	-1	validated	p.T378M	1.000	6	0.000	6	0.833	84	47.6%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
TMEM63C	57156	genome.wustl.edu	37	14	77686430	77686430	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020431.2	+1	validated	p.K104N	1.000	23	0%	45	24.4%	2	0%	benign(0.286)	tolerated(0.57)	neutral(0.094)	NULL
C14orf133	63894	genome.wustl.edu	37	14	77896104	77896104	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022067.2	-1	provisional	p.L396M	1.000	116	0%	59	44.1%	12	66.6%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_Golgin_A5
AHSA1	10598	genome.wustl.edu	37	14	77934519	77934519	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012111.2	+1	validated	p.T262A	0.692	108	0.9%	71	46.5%	246	54.4%	benign(0.012)	tolerated(0.71)	neutral(0.002)	HMMPfam_AHSA1,superfamily_Bet v1-like
ISM2	145501	genome.wustl.edu	37	14	77942294	77942294	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199296.2	-1	reviewed	p.R454W	0.791	5	0.000	7	0.571	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_AMOP,HMMSmart_SM00723
SNW1	22938	genome.wustl.edu	37	14	78221346	78221346	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012245.2	-1	reviewed	p.Y44	0.992	233	0.9%	114	48.2%	48	47.9%	unknown(0)	-	-	NULL
ADCK1	57143	genome.wustl.edu	37	14	78353558	78353558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020421.3	+1	validated	p.R183Q	1.000	25	0%	32	40.6%	4	50%	benign(0)	tolerated(0.6)	neutral(0.004)	HMMPfam_ABC1,superfamily_Kinase_like
NRXN3	9369	genome.wustl.edu	37	14	79175585	79175585	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004796.4	+1	reviewed	p.R43H	1.000	142	0%	55	52.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_ConA_like_lec_gl
NRXN3	9369	genome.wustl.edu	37	14	79181260	79181260	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004796.4	+1	reviewed	p.V235M	1.000	16	0%	10	60%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
NRXN3	9369	genome.wustl.edu	37	14	79181455	79181455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004796.4	+1	reviewed	p.G300R	1.000	11	0.000	8	0.625	0	-	probably_damaging(0.995)	tolerated(0.07)	deleterious(0.776)	HMMPfam_EGF,HMMSmart_EGF,superfamily_ConA_like_lec_gl
NRXN3	9369	genome.wustl.edu	37	14	80164138	80164138	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004796.4	+1	reviewed	p.R888Q	1.000	93	0%	17	23.5%	1	100%	probably_damaging(0.969)	tolerated(0.46)	neutral(0.423)	NULL
DIO2	1734	genome.wustl.edu	37	14	80669165	80669165	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007023.2	-1	reviewed	p.V266A	1.000	117	0%	67	43.3%	5	20%	probably_damaging(0.974)	deleterious(0.01)	deleterious(0.822)	HMMPfam_T4_deiodinase
CEP128	145508	genome.wustl.edu	37	14	80993260	80993260	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152446.3	-1	validated	p.L1009F	0.993	346	0%	126	42.9%	1	0%	unknown(0)	tolerated(0.05)	-	NULL
CEP128	145508	genome.wustl.edu	37	14	81251483	81251483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152446.3	-1	validated	p.R656I	0.933	171	0%	90	41.1%	6	33.3%	unknown(0)	tolerated(0.16)	-	NULL
CEP128	145508	genome.wustl.edu	37	14	81259158	81259158	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152446.3	-1	validated	p.R502	0.672	225	0%	91	30.8%	5	20%	-	-	-	NULL
CEP128	145508	genome.wustl.edu	37	14	81382743	81382743	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152446.3	-1	validated	e1+2	1.000	200	0%	69	43.5%	0	-	-	-	-	-
SEL1L	6400	genome.wustl.edu	37	14	81943522	81943522	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005065.4	-1	validated	p.R727*	1.000	82	0%	48	39.6%	16	31.2%	-	-	-	NULL
SEL1L	6400	genome.wustl.edu	37	14	81946066	81946066	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005065.4	-1	validated	p.R689C	1.000	91	0%	68	16.2%	28	17.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sel1,HMMSmart_SM00671,superfamily_HCP-like
FLRT2	23768	genome.wustl.edu	37	14	86088723	86088723	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013231.4	+1	reviewed	p.R289W	1.000	63	0%	37	45.9%	1	100%	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058
GALC	2581	genome.wustl.edu	37	14	88442730	88442730	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000153.2	-1	reviewed	p.E242K	0.976	187	0%	72	43.1%	4	50%	possibly_damaging(0.731)	tolerated(0.16)	neutral(0.327)	HMMPfam_Glyco_hydro_59,superfamily_(Trans)glycosidases
GPR65	8477	genome.wustl.edu	37	14	88477671	88477671	+	Silent	SNP	C	C	T	rs139775422	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003608.3	+1	validated	p.C160	0.000	110	0%	50	48%	1	0%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR65	8477	genome.wustl.edu	37	14	88477997	88477997	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003608.3	+1	validated	p.Y269C	0.580	312	0%	78	29.5%	1	0%	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
KCNK10	54207	genome.wustl.edu	37	14	88693832	88693832	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138317.2	-1	reviewed	p.I190V	1.000	193	0%	81	38.3%	0	-	benign(0.141)	tolerated(0.15)	neutral(0.253)	HMMPfam_Ion_trans_2,superfamily_Voltage-gated potassium channels
TTC8	123016	genome.wustl.edu	37	14	89307768	89307768	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144596.2	+1	reviewed	e6-1	1.000	380	0%	128	42.2%	0	-	-	-	-	-
C14orf102	55051	genome.wustl.edu	37	14	90755053	90755053	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017970.2	-1	validated	p.S889N	0.007	43	0%	34	44.1%	3	0%	benign(0.08)	tolerated(0.41)	neutral(0.020)	NULL
CALM1	801	genome.wustl.edu	37	14	90870756	90870756	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006888.4	+1	reviewed	p.R107C	1.000	269	0.7%	147	42.9%	381	38.5%	benign(0.124)	deleterious(0.01)	neutral(0.416)	HMMSmart_SM00054,HMMPfam_efhand,superfamily_EF-hand
TTC7B	145567	genome.wustl.edu	37	14	91110408	91110408	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010854.1	-1	provisional	p.Y579H	1.000	90	0%	43	60.5%	29	55.1%	benign(0.027)	tolerated(0.37)	neutral(0.021)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
C14orf159	80017	genome.wustl.edu	37	14	91633643	91633643	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102368.1	+1	validated	p.T60A	0.012	64	0%	47	34%	27	62.9%	benign(0.25)	tolerated(0.08)	neutral(0.326)	NULL
C14orf159	80017	genome.wustl.edu	37	14	91671103	91671103	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102368.1	+1	validated	p.R500G	0.996	40	0%	38	28.9%	70	32.8%	benign(0.042)	deleterious(0.04)	neutral(0.351)	NULL
CCDC88C	440193	genome.wustl.edu	37	14	91739599	91739599	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080414.2	-1	validated	p.E1819	0.992	7	0.000	7	0.714	14	35.7%	-	-	-	NULL
CCDC88C	440193	genome.wustl.edu	37	14	91745647	91745647	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080414.2	-1	validated	p.S1568L	0.960	167	0%	128	40.6%	21	61.9%	possibly_damaging(0.685)	deleterious(0.01)	deleterious(0.650)	NULL
CATSPERB	79820	genome.wustl.edu	37	14	92195794	92195794	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024764.2	-1	validated	p.V10	0.015	204	0%	58	27.6%	0	-	-	-	-	NULL
TRIP11	9321	genome.wustl.edu	37	14	92436023	92436023	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004239.3	-1	reviewed	p.K1978N	1.000	45	0%	20	40%	18	55.5%	possibly_damaging(0.773)	deleterious(0.04)	deleterious(0.636)	NULL
TRIP11	9321	genome.wustl.edu	37	14	92436220	92436220	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004239.3	-1	reviewed	p.S1913P	0.009	146	0%	51	39.2%	13	46.1%	benign(0.08)	tolerated(0.2)	neutral(0.054)	NULL
TRIP11	9321	genome.wustl.edu	37	14	92469840	92469840	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004239.3	-1	reviewed	p.R1494*	0.699	505	0%	257	13.2%	11	0%	-	-	-	NULL
TRIP11	9321	genome.wustl.edu	37	14	92470807	92470807	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004239.3	-1	reviewed	p.I1171	0.983	177	0%	80	47.5%	1	100%	-	-	-	NULL
NDUFB1	4707	genome.wustl.edu	37	14	92583949	92583949	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004545.3	-1	validated	p.H58Q	1.000	217	0%	112	49.1%	303	43.2%	benign(0.002)	tolerated(0.19)	neutral(0.050)	HMMPfam_NADH_oxidored
LGMN	5641	genome.wustl.edu	37	14	93179217	93179217	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008530.1	-1	reviewed	e7-1	1.000	31	0%	19	73.7%	0	-	-	-	-	-
GOLGA5	9950	genome.wustl.edu	37	14	93301954	93301954	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005113.2	+1	reviewed	p.L666M	0.669	221	0%	80	38.8%	28	46.4%	benign(0.002)	tolerated(0.08)	neutral(0.300)	HMMPfam_Golgin_A5
UBR7	55148	genome.wustl.edu	37	14	93676168	93676168	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175748.3	+1	validated	e2-2	0.997	197	0%	97	45.4%	0	-	-	-	-	-
BTBD7	55727	genome.wustl.edu	37	14	93760516	93760516	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002860.2	-1	validated	p.R284W	1.000	119	0%	73	41.1%	7	42.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
UNC79	57578	genome.wustl.edu	37	14	94039109	94039109	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020818.3	+1	validated	p.R496W	1.000	445	0%	168	49.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
UNC79	57578	genome.wustl.edu	37	14	94156462	94156462	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020818.3	+1	validated	e43-1	1.000	140	0%	77	11.7%	0	-	-	-	-	-
LINC00521	256369	genome.wustl.edu	37	14	94467722	94467722	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024182.1	+1	validated	NULL	0.001	10	0%	12	75%	0	-	-	-	-	-
DDX24	57062	genome.wustl.edu	37	14	94528875	94528875	+	Missense_Mutation	SNP	C	C	T	rs149296999	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020414.3	-1	reviewed	p.E271K	0.002	49	0%	21	61.9%	82	47.5%	benign(0)	tolerated(0.31)	neutral(0.027)	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
IFI27	3429	genome.wustl.edu	37	14	94582185	94582185	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005532.3	+1	provisional	p.S60	0.000	12	0%	13	61.5%	69	4.3%	-	-	-	HMMPfam_Ifi-6-16
PPP4R4	57718	genome.wustl.edu	37	14	94696943	94696943	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058237.1	+1	reviewed	p.G105E	1.000	84	0%	57	54.4%	0	-	benign(0.002)	tolerated(0.3)	neutral(0.029)	superfamily_ARM repeat
PPP4R4	57718	genome.wustl.edu	37	14	94700006	94700006	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058237.1	+1	reviewed	p.V178A	1.000	197	0%	109	46.8%	1	100%	possibly_damaging(0.595)	deleterious(0.02)	deleterious(0.589)	superfamily_ARM repeat
SERPINA11	256394	genome.wustl.edu	37	14	94914890	94914890	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080451.1	-1	provisional	p.F74L	1.000	56	0%	34	44.1%	0	-	benign(0.004)	tolerated(0.82)	neutral(0.001)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
SERPINA9	327657	genome.wustl.edu	37	14	94933679	94933679	+	Silent	SNP	C	C	T	rs149130980	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175739.3	-1	validated	p.K241	0.000	53	0%	35	51.4%	0	-	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SERPINA12	145264	genome.wustl.edu	37	14	94962747	94962747	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173850.2	-1	provisional	p.D290N	0.060	187	0%	114	37.7%	0	-	benign(0.356)	deleterious(0.02)	deleterious(0.496)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
SERPINA12	145264	genome.wustl.edu	37	14	94964620	94964620	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173850.2	-1	provisional	p.W39R	0.000	79	0%	45	44.4%	0	-	benign(0.079)	tolerated(0.23)	neutral(0.047)	superfamily_Prot_inh_serpin
SERPINA5	5104	genome.wustl.edu	37	14	95054272	95054272	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000624.4	+1	validated	p.L191	0.117	41	0%	29	41.4%	3	66.6%	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SERPINA5	5104	genome.wustl.edu	37	14	95054287	95054287	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000624.4	+1	validated	p.V196	0.104	47	0%	29	34.5%	2	0%	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SERPINA3	12	genome.wustl.edu	37	14	95081287	95081287	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085.4	+1	reviewed	p.F170S	1.000	74	0%	45	48.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
DICER1	23405	genome.wustl.edu	37	14	95569912	95569912	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030621.3	-1	reviewed	p.R1274M	0.000	131	0%	60	35%	8	25%	benign(0.017)	deleterious(0.03)	neutral(0.365)	superfamily_RNase_III
DICER1	23405	genome.wustl.edu	37	14	95574253	95574253	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030621.3	-1	reviewed	p.A872T	1.000	324	0%	157	44.6%	9	55.5%	probably_damaging(0.99)	tolerated(0.72)	neutral(0.443)	NULL
C14orf49	161176	genome.wustl.edu	37	14	95932292	95932292	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152592.3	-1	validated	p.Y201	0.659	61	0%	51	41.2%	0	-	-	-	-	superfamily_Spectrin repeat
ATG2B	55102	genome.wustl.edu	37	14	96752104	96752104	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018036.5	-1	validated	p.H2075	0.053	75	0%	40	42.5%	26	34.6%	-	-	-	NULL
ATG2B	55102	genome.wustl.edu	37	14	96756790	96756790	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018036.5	-1	validated	p.M1947V	1.000	41	0%	15	40%	7	42.8%	benign(0.02)	tolerated(0.17)	neutral(0.060)	NULL
ATG2B	55102	genome.wustl.edu	37	14	96769450	96769450	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018036.5	-1	validated	p.F1662C	1.000	250	0%	150	50%	6	66.6%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
AK7	122481	genome.wustl.edu	37	14	96924551	96924551	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152327.2	+1	validated	e12+2	0.980	69	0%	26	38.5%	0	-	-	-	-	-
VRK1	7443	genome.wustl.edu	37	14	97321592	97321592	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003384.2	+1	reviewed	p.R203Q	1.000	486	0%	202	42.6%	27	81.4%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	superfamily_Kinase_like
VRK1	7443	genome.wustl.edu	37	14	97321652	97321652	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003384.2	+1	reviewed	p.G223D	1.000	233	0%	103	42.7%	36	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Kinase_like
VRK1	7443	genome.wustl.edu	37	14	97326983	97326983	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003384.2	+1	reviewed	p.G327*	1.000	420	0%	146	46.6%	23	26%	-	-	-	superfamily_Kinase_like
BCL11B	64919	genome.wustl.edu	37	14	99723922	99723922	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138576.2	-1	reviewed	p.E105K	1.000	14	0%	24	58.3%	1	0%	benign(0.005)	tolerated(0.05)	neutral(0.345)	NULL
SETD3	84193	genome.wustl.edu	37	14	99865085	99865085	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032233.2	-1	validated	p.Q572H	0.028	265	0%	159	39%	41	41.4%	benign(0.01)	deleterious(0.04)	neutral(0.349)	NULL
CCNK	8812	genome.wustl.edu	37	14	99973458	99973458	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099402.1	+1	reviewed	p.P364L	1.000	224	0%	170	40.6%	103	45.6%	unknown(0)	tolerated(0.11)	-	NULL
CCDC85C	317762	genome.wustl.edu	37	14	99988506	99988506	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144995.1	-1	validated	p.A313	0.025	28	0%	25	60%	38	39.4%	-	-	-	NULL
HHIPL1	84439	genome.wustl.edu	37	14	100134587	100134587	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127258.1	+1	validated	p.E559	0.632	49	0%	37	29.7%	0	-	-	-	-	NULL
CYP46A1	10858	genome.wustl.edu	37	14	100158180	100158180	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380228	+1	known	p.R45Q	0.937	202	0%	119	47.9%	3	33.3%	-	-	-	NULL
EML1	2009	genome.wustl.edu	37	14	100363557	100363557	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008707.1	+1	reviewed	p.A270	0.214	58	0%	44	40.9%	7	71.4%	-	-	-	HMMPfam_HELP
EML1	2009	genome.wustl.edu	37	14	100376630	100376630	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008707.1	+1	reviewed	p.D450N	1.000	210	0%	119	40.3%	5	40%	possibly_damaging(0.565)	tolerated(0.07)	deleterious(0.512)	HMMSmart_WD40,superfamily_WD40_like
EML1	2009	genome.wustl.edu	37	14	100406344	100406344	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008707.1	+1	reviewed	p.G800	0.052	28	0%	43	48.8%	10	40%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
MIR342	442909	genome.wustl.edu	37	14	100576072	100576072	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000362212	+1	known	NULL	1.000	80	0%	59	52.5%	0	-	-	-	-	-
BEGAIN	57596	genome.wustl.edu	37	14	101006837	101006837	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020836.3	-1	validated	p.S144F	1.000	8	0.000	17	0.412	0	-	possibly_damaging(0.613)	deleterious(0)	deleterious(0.657)	NULL
RTL1	388015	genome.wustl.edu	37	14	101350508	101350508	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134888.2	-1	reviewed	p.F206L	0.694	87	0%	88	46.6%	0	-	possibly_damaging(0.892)	deleterious(0)	deleterious(0.796)	NULL
MIR543	100126335	genome.wustl.edu	37	14	101498369	101498369	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390751	+1	known	NULL	1.000	355	0%	264	43.6%	0	-	-	-	-	-
MIR154	406946	genome.wustl.edu	37	14	101526141	101526141	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000385243	+1	known	NULL	0.991	270	0%	165	53.9%	0	-	-	-	-	-
MIR410	574434	genome.wustl.edu	37	14	101532271	101532271	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000362222	+1	known	NULL	1.000	114	0%	71	38%	0	-	-	-	-	-
PPP2R5C	5527	genome.wustl.edu	37	14	102391579	102391579	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002719.3	+1	reviewed	p.A515	0.995	11	0%	16	25%	19	47.3%	-	-	-	NULL
DYNC1H1	1778	genome.wustl.edu	37	14	102483797	102483797	+	Silent	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001376.4	+1	reviewed	p.A2711	0.991	129	0%	99	46.5%	36	16.6%	-	-	-	HMMSmart_AAA,HMMPfam_AAA_5,superfamily_SSF52540
DYNC1H1	1778	genome.wustl.edu	37	14	102499638	102499638	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001376.4	+1	reviewed	p.E3410D	1.000	90	0%	53	17%	75	5.3%	benign(0.01)	tolerated(0.45)	neutral(0.013)	NULL
DYNC1H1	1778	genome.wustl.edu	37	14	102505514	102505514	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001376.4	+1	reviewed	p.E3795*	1.000	36	0%	41	51.2%	114	13.1%	-	-	-	NULL
HSP90AA1	3320	genome.wustl.edu	37	14	102551127	102551127	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017963.2	-1	validated	p.N413S	1.000	688	0%	427	43.8%	664	45.1%	possibly_damaging(0.857)	deleterious(0)	deleterious(0.776)	HMMPfam_HSP90
MOK	5891	genome.wustl.edu	37	14	102698893	102698893	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014226.1	-1	provisional	p.H282R	1.000	101	0%	96	47.9%	10	60%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ZNF839	55778	genome.wustl.edu	37	14	102792616	102792616	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018335.3	+1	validated	p.A195S	0.004	35	2.9%	41	41.5%	4	50%	possibly_damaging(0.677)	tolerated(0.14)	deleterious(0.490)	NULL
ZNF839	55778	genome.wustl.edu	37	14	102798056	102798056	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018335.3	+1	validated	p.A430V	0.000	49	0%	27	44.4%	7	28.5%	benign(0.1)	tolerated(0.27)	neutral(0.041)	NULL
TECPR2	9895	genome.wustl.edu	37	14	102901144	102901144	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014844.3	+1	validated	p.L664	0.002	11	0%	17	64.7%	7	42.8%	-	-	-	NULL
CDC42BPB	9578	genome.wustl.edu	37	14	103418911	103418911	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006035.3	-1	reviewed	p.S1032	1.000	90	0%	74	44.6%	83	51.8%	-	-	-	HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_SSF57889
MARK3	4140	genome.wustl.edu	37	14	103941462	103941462	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128918.1	+1	validated	p.A466D	0.476	79	0%	46	34.8%	48	58.3%	benign(0)	tolerated(0.12)	neutral(0.261)	NULL
MARK3	4140	genome.wustl.edu	37	14	103958316	103958316	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128918.1	+1	validated	p.R597*	1.000	77	0%	65	50.8%	40	17.5%	-	-	-	NULL
MARK3	4140	genome.wustl.edu	37	14	103969222	103969222	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128918.1	+1	validated	p.R640	1.000	77	0%	39	28.2%	57	22.8%	-	-	-	superfamily_Kinase associated domain 1 KA1
ASPG	374569	genome.wustl.edu	37	14	104561877	104561877	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080464.1	+1	provisional	p.E105K	0.459	25	0%	17	52.9%	0	-	benign(0.004)	tolerated(0.33)	neutral(0.024)	HMMPfam_Asparaginase,superfamily_Glutaminase/Asparaginase
INF2	64423	genome.wustl.edu	37	14	105175987	105175987	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022489.3	+1	validated	p.R695*	0.027	2	0.000	11	0.727	36	13.8%	-	-	-	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
ADSSL1	122622	genome.wustl.edu	37	14	105209467	105209467	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199165.1	+1	validated	p.R381C	1.000	21	0%	19	26.3%	18	38.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Adenylsucc_synt,HMMSmart_Adenylsucc_synt,superfamily_SSF52540
KIAA0284	283638	genome.wustl.edu	37	14	105344260	105344260	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001112726.1	+1	validated	p.Y78	1.000	19	0%	29	62.1%	42	52.3%	-	-	-	HMMPfam_FHA,superfamily_SMAD_FHA
AHNAK2	113146	genome.wustl.edu	37	14	105405237	105405237	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.G5517	0.903	116	0%	81	23.5%	12	16.6%	-	-	-	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105407765	105407765	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.G4675S	0.000	84	0%	40	40%	13	46.1%	probably_damaging(0.985)	tolerated(0.49)	neutral(0.443)	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105408450	105408450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.E4446D	0.000	62	0%	79	41.8%	10	60%	benign(0.042)	tolerated(0.27)	neutral(0.036)	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105410997	105410997	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.V3597	0.018	59	0%	70	40%	7	71.4%	-	-	-	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105411354	105411354	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.F3478	1.000	102	0%	85	41.2%	7	57.1%	-	-	-	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105414255	105414255	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.P2511	0.033	46	0%	74	36.5%	1	0%	-	-	-	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105416895	105416895	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.P1631	0.000	86	0%	85	42.4%	3	66.6%	-	-	-	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105420401	105420401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.A463T	0.008	32	0%	36	47.2%	6	83.3%	benign(0.29)	deleterious(0)	deleterious(0.534)	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105421098	105421098	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138420.2	-1	validated	p.T230	0.000	22	0%	21	42.9%	6	33.3%	-	-	-	NULL
BRF1	2972	genome.wustl.edu	37	14	105677502	105677502	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001519.2	-1	reviewed	p.D651	0.775	15	0%	14	28.6%	64	12.5%	-	-	-	NULL
BRF1	2972	genome.wustl.edu	37	14	105739058	105739058	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001519.2	-1	reviewed	p.H147Y	0.999	7	0.000	14	0.357	25	36%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMSmart_SM00385,superfamily_Cyclin-like,HMMPfam_TFIIB
PACS2	23241	genome.wustl.edu	37	14	105859581	105859581	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100913.1	+1	validated	p.A824	0.946	28	0%	20	70%	98	50%	-	-	-	HMMPfam_Pacs-1
MTA1	9112	genome.wustl.edu	37	14	105924658	105924658	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004689.3	+1	reviewed	p.A201V	0.974	8	0.000	11	0.455	118	53.3%	benign(0.124)	deleterious(0)	neutral(0.455)	HMMPfam_ELM2
IGHD	3495	genome.wustl.edu	37	14	106307519	106307519	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390556	-1	known	p.*173	0.008	15	0%	12	50%	2	0%	benign(0.001)	tolerated(0.37)	neutral(0.019)	superfamily_Immunoglobulin
IGHD	3495	genome.wustl.edu	37	14	106311962	106311962	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390556	-1	known	p.T17A	0.000	95	0%	104	37.5%	1	0%	unknown(0)	deleterious(0.05)	-	HMMPfam_C1-set,superfamily_Immunoglobulin
IGHM	3507	genome.wustl.edu	37	14	106320562	106320562	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390558	-1	known	p.P412L	0.157	30	0%	26	42.3%	125	0.8%	-	-	-	PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin
IGHM	3507	genome.wustl.edu	37	14	106321299	106321299	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390558	-1	known	p.P226H	0.000	79	0%	92	60.9%	157	0%	-	-	-	HMMPfam_C1-set,superfamily_Immunoglobulin
IGHJ3	28479	genome.wustl.edu	37	14	106330825	106330825	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000463911	-1	known	p.G7	0.992	93	0%	89	40.4%	49	0%	-	-	-	NULL
IGHV6-1	28385	genome.wustl.edu	37	14	106405813	106405813	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390593	-1	known	p.A54D	0.000	78	0%	70	45.7%	5	0%	probably_damaging(0.973)	deleterious(0.02)	deleterious(0.798)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
IGHV4-31	28396	genome.wustl.edu	37	14	106805600	106805600	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000438142	-1	known	p.R15S	0.004	789	0%	606	11.7%	17	0%	probably_damaging(0.977)	tolerated(0.63)	neutral(0.422)	NULL
IGHV3-33	28434	genome.wustl.edu	37	14	106815884	106815884	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390615	-1	known	p.G63	0.996	517	0%	371	22.6%	9	0%	-	-	-	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
IGHV3-49	28423	genome.wustl.edu	37	14	107013129	107013129	+	Missense_Mutation	SNP	A	A	G	rs2073674	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390625	-1	known	p.F56L	0.999	106	0%	69	39.1%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGHV5-51	28388	genome.wustl.edu	37	14	107034966	107034966	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390626	-1	known	p.K38N	0.000	26	0%	23	47.8%	2	0%	benign(0.259)	deleterious(0.01)	neutral(0.433)	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
ENSG00000215407	0	genome.wustl.edu	37	15	20434029	20434029	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000400226	-1	known	p.I531	0.998	198	0%	114	19.3%	0	-	-	-	-	NULL
GOLGA6L6	727832	genome.wustl.edu	37	15	20739697	20739697	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145004.1	-1	inferred	p.R685W	0.760	17	0%	21	57.1%	0	-	unknown(0)	deleterious(0.05)	-	NULL
OR4M2	390538	genome.wustl.edu	37	15	22369069	22369069	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004719.2	+1	validated	p.R165Q	0.012	537	0%	165	27.9%	0	-	benign(0.242)	tolerated(1)	neutral(0.025)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4N4	283694	genome.wustl.edu	37	15	22383369	22383369	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005241.1	+1	provisional	p.K299	0.998	96	0%	43	11.6%	0	-	-	-	-	superfamily_SSF81321
CYFIP1	23191	genome.wustl.edu	37	15	22935949	22935949	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014608.2	+1	validated	p.I295	0.130	319	0%	203	44.3%	51	49%	-	-	-	HMMPfam_FragX_IP
ENSG00000140181	0	genome.wustl.edu	37	15	23300085	23300085	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000454333	-1	known	p.P64H	0.994	14	0%	19	36.8%	54	37%	-	-	-	NULL
ENSG00000223681	0	genome.wustl.edu	37	15	23326296	23326296	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000422607	-1	known	p.I171M	1.000	209	0%	121	22.3%	4	50%	benign(0.427)	tolerated(0.17)	neutral(0.198)	NULL
LOC653061	653061	genome.wustl.edu	37	15	23605922	23605922	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343324.1	+1	model	p.E282D	0.873	314	0%	181	43.1%	0	-	-	-	-	NULL
MAGEL2	54551	genome.wustl.edu	37	15	23889185	23889185	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019066.4	-1	reviewed	p.T632	0.000	38	0%	34	47.1%	0	-	-	-	-	NULL
MAGEL2	54551	genome.wustl.edu	37	15	23890195	23890195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019066.4	-1	reviewed	p.R296C	0.000	58	0%	68	52.9%	0	-	benign(0)	tolerated(0.3)	neutral(0.029)	NULL
C15orf2	23742	genome.wustl.edu	37	15	24924140	24924140	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018958.2	+1	reviewed	p.Q1042	0.000	30	0%	38	34.2%	0	-	-	-	-	NULL
ATP10A	57194	genome.wustl.edu	37	15	25953381	25953381	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024490.3	-1	reviewed	p.A804V	1.000	83	0%	76	47.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF56784,superfamily_SSF81660
ATP10A	57194	genome.wustl.edu	37	15	25963534	25963534	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024490.3	-1	reviewed	p.A459V	1.000	5	0.000	11	0.545	0	-	possibly_damaging(0.446)	tolerated(0.09)	neutral(0.443)	superfamily_SSF56784
GABRA5	2558	genome.wustl.edu	37	15	27128556	27128556	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000810.3	+1	reviewed	p.R117C	1.000	59	0%	36	11.1%	0	-	probably_damaging(0.997)	deleterious(0.04)	deleterious(0.815)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
OCA2	4948	genome.wustl.edu	37	15	28000554	28000554	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000275.2	-1	reviewed	p.V833M	0.283	177	0%	95	45.3%	1	0%	probably_damaging(0.986)	tolerated(0.07)	deleterious(0.754)	NULL
HERC2	8924	genome.wustl.edu	37	15	28362399	28362399	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000429795	-1	known	p.G81S	0.000	6	0.000	11	0.455	1	0%	-	-	-	NULL
HERC2	8924	genome.wustl.edu	37	15	28366536	28366536	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004667.4	-1	reviewed	p.R4410C	1.000	79	0%	58	41.4%	21	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HERC2	8924	genome.wustl.edu	37	15	28369219	28369219	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004667.4	-1	reviewed	p.F4384	0.999	79	1.3%	53	39.6%	19	52.6%	-	-	-	NULL
HERC2	8924	genome.wustl.edu	37	15	28397830	28397830	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004667.4	-1	reviewed	p.K3631N	0.999	43	0%	32	53.1%	20	55%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
HERC2	8924	genome.wustl.edu	37	15	28419642	28419642	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004667.4	-1	reviewed	p.S3319F	0.998	49	0%	31	29%	8	50%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_RCC1,superfamily_RCC1/BLIP-II
HERC2	8924	genome.wustl.edu	37	15	28436304	28436304	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004667.4	-1	reviewed	p.P2846	0.221	227	0%	107	17.8%	11	18.1%	-	-	-	superfamily_Galactose-binding domain-like
HERC2	8924	genome.wustl.edu	37	15	28474704	28474704	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004667.4	-1	reviewed	p.T1674	0.149	291	0%	177	41.2%	4	50%	-	-	-	NULL
HERC2	8924	genome.wustl.edu	37	15	28501325	28501325	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004667.4	-1	reviewed	p.A886T	0.998	8	0.000	11	0.364	2	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
LOC728310	728310	genome.wustl.edu	37	15	29092235	29092235	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_078490.1	-1	model	NULL	0.053	14	0%	11	45.5%	0	-	-	-	-	-
APBA2	321	genome.wustl.edu	37	15	29393984	29393984	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005503.3	+1	reviewed	p.E507D	1.000	28	0%	25	44%	13	53.8%	possibly_damaging(0.845)	tolerated(0.26)	neutral(0.358)	HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729
TJP1	7082	genome.wustl.edu	37	15	29997787	29997787	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003257.3	-1	validated	p.I1671	1.000	126	0%	64	45.3%	35	31.4%	-	-	-	HMMPfam_ZU5,HMMSmart_SM00218
TJP1	7082	genome.wustl.edu	37	15	30012584	30012584	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003257.3	-1	validated	p.G914E	1.000	281	0%	137	46%	15	53.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ARHGAP11B	89839	genome.wustl.edu	37	15	30926531	30926531	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039841.1	+1	provisional	p.K152N	0.996	351	0%	182	47.8%	4	75%	possibly_damaging(0.655)	deleterious(0.02)	deleterious(0.614)	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
LOC100288637	100288637	genome.wustl.edu	37	15	31042657	31042657	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343359.1	+1	model	p.A17S	1.000	47	0%	39	20.5%	1	0%	-	-	-	NULL
MTMR10	54893	genome.wustl.edu	37	15	31269066	31269066	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017762.2	-1	validated	p.N72D	1.000	330	0%	119	46.2%	5	60%	probably_damaging(0.99)	tolerated(0.21)	deleterious(0.485)	superfamily_PH domain-like
TRPM1	4308	genome.wustl.edu	37	15	31294220	31294220	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002420.4	-1	reviewed	p.P1539	0.058	236	0%	122	12.3%	0	-	-	-	-	NULL
TRPM1	4308	genome.wustl.edu	37	15	31294496	31294496	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002420.4	-1	reviewed	p.K1447N	0.518	91	0%	64	32.8%	0	-	benign(0.083)	deleterious(0.03)	neutral(0.370)	NULL
TRPM1	4308	genome.wustl.edu	37	15	31294929	31294929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002420.4	-1	reviewed	p.S1303F	1.000	122	0%	72	38.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TRPM1	4308	genome.wustl.edu	37	15	31295230	31295230	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002420.4	-1	reviewed	p.E1203K	1.000	49	0%	35	34.3%	0	-	probably_damaging(0.957)	tolerated(0.07)	deleterious(0.720)	NULL
OTUD7A	161725	genome.wustl.edu	37	15	31776536	31776536	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130901.1	-1	provisional	p.T581M	1.000	11	0%	12	33.3%	2	0%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	NULL
OTUD7A	161725	genome.wustl.edu	37	15	31779425	31779425	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130901.1	-1	provisional	p.T441M	1.000	43	0%	32	34.4%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
OTUD7A	161725	genome.wustl.edu	37	15	31822981	31822981	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130901.1	-1	provisional	p.T194M	0.980	73	0%	60	23.3%	0	-	possibly_damaging(0.87)	tolerated(0.1)	deleterious(0.625)	NULL
ARHGAP11A	9824	genome.wustl.edu	37	15	32917393	32917393	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014783.3	+1	validated	p.R222*	0.973	217	0%	107	44.9%	9	11.1%	-	-	-	HMMSmart_RhoGAP,superfamily_Rho_GAP
ARHGAP11A	9824	genome.wustl.edu	37	15	32929649	32929649	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014783.3	+1	validated	p.S892Y	0.003	137	0%	92	47.8%	15	26.6%	possibly_damaging(0.873)	deleterious(0.02)	deleterious(0.722)	NULL
FMN1	342184	genome.wustl.edu	37	15	33359153	33359153	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001103184.2	-1	validated	p.T311	0.986	38	0%	23	39.1%	1	0%	-	-	-	NULL
RYR3	6263	genome.wustl.edu	37	15	33895487	33895487	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001036.3	+1	validated	p.G696C	1.000	119	0%	70	31.4%	1	100%	probably_damaging(1)	-	-	HMMPfam_SPRY,HMMSmart_SM00449
RYR3	6263	genome.wustl.edu	37	15	33922217	33922217	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001036.3	+1	validated	p.N919S	1.000	338	0%	134	10.4%	0	-	possibly_damaging(0.95)	-	-	HMMPfam_RyR
RYR3	6263	genome.wustl.edu	37	15	34119425	34119425	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001036.3	+1	validated	p.Q3757H	1.000	51	0%	35	28.6%	2	50%	probably_damaging(0.999)	-	-	HMMPfam_RIH_assoc
RYR3	6263	genome.wustl.edu	37	15	34130272	34130272	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001036.3	+1	validated	p.R4031C	0.997	68	0%	54	48.1%	0	-	probably_damaging(1)	-	-	NULL
RYR3	6263	genome.wustl.edu	37	15	34147073	34147073	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001036.3	+1	validated	p.L4656P	0.989	196	0%	136	16.9%	2	0%	probably_damaging(0.998)	-	-	HMMPfam_Ion_trans
PGBD4	161779	genome.wustl.edu	37	15	34395939	34395939	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152595.4	+1	validated	p.T403S	0.094	66	0%	64	45.3%	0	-	possibly_damaging(0.789)	tolerated(0.99)	neutral(0.296)	NULL
PGBD4	161779	genome.wustl.edu	37	15	34395982	34395982	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152595.4	+1	validated	p.R417M	0.041	48	0%	51	13.7%	1	0%	benign(0.163)	deleterious(0)	neutral(0.459)	NULL
SLC12A6	9990	genome.wustl.edu	37	15	34528258	34528258	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133647.1	-1	reviewed	p.A1062V	1.000	200	0%	116	47.4%	11	36.3%	benign(0)	tolerated(0.32)	neutral(0.024)	NULL
SLC12A6	9990	genome.wustl.edu	37	15	34536247	34536247	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133647.1	-1	reviewed	p.V657A	1.000	166	0%	79	16.5%	5	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_AA_permease
LPCAT4	254531	genome.wustl.edu	37	15	34651801	34651801	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153613.2	-1	validated	p.G463D	1.000	12	0%	14	28.6%	55	18.1%	possibly_damaging(0.804)	tolerated(0.63)	neutral(0.306)	NULL
LPCAT4	254531	genome.wustl.edu	37	15	34657824	34657824	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153613.2	-1	validated	p.A65T	1.000	70	0%	58	20.7%	13	7.6%	probably_damaging(0.967)	deleterious(0.04)	deleterious(0.758)	NULL
AQR	9716	genome.wustl.edu	37	15	35155083	35155083	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014691.2	-1	validated	p.F1338	1.000	200	0%	57	29.8%	19	47.3%	-	-	-	NULL
ZNF770	54989	genome.wustl.edu	37	15	35275308	35275308	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014106.2	-1	validated	p.N110H	1.000	181	0%	69	37.7%	8	37.5%	benign(0.02)	tolerated(0.12)	neutral(0.262)	superfamily_SSF57667
TMCO5A	145942	genome.wustl.edu	37	15	38234435	38234435	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152453.2	+1	provisional	p.A183V	0.989	306	0%	78	39.7%	0	-	benign(0.006)	tolerated(1)	-	NULL
SPRED1	161742	genome.wustl.edu	37	15	38643813	38643813	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152594.2	+1	reviewed	p.R428H	1.000	59	1.7%	20	30%	27	44.4%	unknown(0)	tolerated(0.57)	-	HMMPfam_Sprouty
FAM98B	283742	genome.wustl.edu	37	15	38762459	38762459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173611.2	+1	validated	p.Q128H	1.000	152	1.3%	34	32.4%	20	55%	possibly_damaging(0.801)	deleterious(0.02)	deleterious(0.684)	HMMPfam_DUF2465
RASGRP1	10125	genome.wustl.edu	37	15	38818585	38818585	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005739.3	-1	reviewed	p.R81*	1.000	154	0%	52	34.6%	1	0%	-	-	-	HMMPfam_RasGEF_N,HMMSmart_SM00229,superfamily_Ras GEF
THBS1	7057	genome.wustl.edu	37	15	39885651	39885651	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003246.2	+1	reviewed	p.E1017K	1.000	81	0%	60	40%	14	0%	benign(0.158)	tolerated(0.11)	neutral(0.286)	HMMPfam_TSP_C,superfamily_Concanavalin A-like lectins/glucanases
FSIP1	161835	genome.wustl.edu	37	15	40018812	40018812	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152597.4	-1	validated	p.R343I	0.002	166	0%	75	54.7%	0	-	probably_damaging(0.981)	tolerated(0.11)	deleterious(0.697)	NULL
FSIP1	161835	genome.wustl.edu	37	15	40034088	40034088	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152597.4	-1	validated	p.E191D	0.001	353	0%	134	36.6%	0	-	benign(0.14)	tolerated(0.17)	neutral(0.071)	NULL
PLCB2	5330	genome.wustl.edu	37	15	40590454	40590454	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004573.2	-1	validated	p.G375	0.999	23	0%	37	48.6%	0	-	-	-	-	HMMPfam_PI-PLC-X,HMMSmart_SM00148,superfamily_PLC-like phosphodiesterases
BAHD1	22893	genome.wustl.edu	37	15	40752064	40752064	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014952.3	+1	validated	p.G467	0.976	21	0%	30	40%	12	41.6%	-	-	-	NULL
BAHD1	22893	genome.wustl.edu	37	15	40754326	40754326	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014952.3	+1	validated	p.R550C	1.000	9	0.000	13	0.308	20	45%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BAHD1	22893	genome.wustl.edu	37	15	40754425	40754425	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014952.3	+1	validated	p.R583C	0.024	6	0.000	6	0.667	13	61.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C15orf62	643338	genome.wustl.edu	37	15	41062839	41062839	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130448.2	+1	validated	p.R49Q	0.974	22	0%	12	33.3%	1	0%	possibly_damaging(0.516)	deleterious(0)	deleterious(0.618)	NULL
VPS18	57617	genome.wustl.edu	37	15	41192066	41192066	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020857.2	+1	reviewed	p.T350	0.002	10	0%	18	44.4%	14	35.7%	-	-	-	HMMPfam_Pep3_Vps18
DLL4	54567	genome.wustl.edu	37	15	41228944	41228944	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019074.2	+1	reviewed	p.N587H	1.000	26	0%	19	63.2%	8	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
INO80	54617	genome.wustl.edu	37	15	41339650	41339650	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017553.1	-1	reviewed	p.S897	0.973	248	0%	105	37.1%	8	62.5%	-	-	-	NULL
FAM92A1P1	729073	genome.wustl.edu	37	15	41456206	41456206	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000287660	+1	known	p.Q179H	0.998	244	0%	161	42.2%	13	0%	-	-	-	HMMPfam_DUF1208
NUSAP1	51203	genome.wustl.edu	37	15	41667960	41667960	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016359.3	+1	validated	p.N353D	0.023	390	0%	192	20.3%	64	18.7%	benign(0.132)	tolerated(0.26)	neutral(0.045)	NULL
RTF1	23168	genome.wustl.edu	37	15	41758373	41758373	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015138.4	+1	validated	p.R271Q	1.000	193	0%	118	45.8%	28	46.4%	probably_damaging(0.998)	tolerated(0.59)	deleterious(0.479)	NULL
RPAP1	26015	genome.wustl.edu	37	15	41822148	41822148	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015540.2	-1	reviewed	p.E325*	1.000	26	0%	24	16.7%	12	0%	-	-	-	NULL
MGA	23269	genome.wustl.edu	37	15	41991100	41991100	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080541.2	+1	validated	p.E685*	1.000	155	0%	84	47.6%	2	50%	-	-	-	NULL
MGA	23269	genome.wustl.edu	37	15	42003031	42003031	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080541.2	+1	validated	p.Q856	1.000	228	0%	125	12%	3	33.3%	-	-	-	NULL
MGA	23269	genome.wustl.edu	37	15	42028385	42028385	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080541.2	+1	validated	p.S1308N	1.000	82	0%	49	44.9%	2	50%	benign(0.01)	deleterious(0)	neutral(0.445)	NULL
MGA	23269	genome.wustl.edu	37	15	42041535	42041535	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080541.2	+1	validated	p.Q1959	0.390	164	0%	71	9.9%	3	66.6%	-	-	-	NULL
MGA	23269	genome.wustl.edu	37	15	42058209	42058209	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080541.2	+1	validated	p.D2692	0.993	66	0%	33	33.3%	9	77.7%	-	-	-	NULL
MAPKBP1	23005	genome.wustl.edu	37	15	42104718	42104718	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128608.1	+1	validated	p.N168S	1.000	59	0%	41	58.5%	5	40%	benign(0.018)	tolerated(0.08)	neutral(0.300)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
MAPKBP1	23005	genome.wustl.edu	37	15	42107505	42107505	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128608.1	+1	validated	p.S413P	1.000	58	0%	60	36.7%	4	50%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
JMJD7	100137047	genome.wustl.edu	37	15	42129292	42129292	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114632.1	+1	validated	p.D297N	1.000	56	1.8%	67	35.8%	24	45.8%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00558,superfamily_Clavaminate synthase-like
JMJD7-PLA2G4B	8681	genome.wustl.edu	37	15	42131206	42131206	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_015346.1	+1	validated	NULL	0.000	15	0%	20	45%	3	33.3%	-	-	-	-
JMJD7-PLA2G4B	8681	genome.wustl.edu	37	15	42133048	42133048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005090.3	+1	validated	p.A330V	0.403	54	0%	82	45.1%	18	33.3%	benign(0)	tolerated(1)	-	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SPTBN5	51332	genome.wustl.edu	37	15	42144455	42144455	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016642.2	-1	validated	p.S3468	0.000	19	0%	13	38.5%	9	66.6%	-	-	-	HMMSmart_SM00150
PLA2G4D	283748	genome.wustl.edu	37	15	42361087	42361087	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178034.3	-1	validated	p.G761	0.000	10	0%	10	50%	1	100%	-	-	-	superfamily_FabD/lysophospholipase-like
PLA2G4D	283748	genome.wustl.edu	37	15	42363440	42363440	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178034.3	-1	validated	p.A586V	0.928	13	0%	14	50%	0	-	benign(0.025)	deleterious(0.03)	neutral(0.365)	HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like
PLA2G4D	283748	genome.wustl.edu	37	15	42363662	42363662	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178034.3	-1	validated	p.K554T	0.202	39	0%	51	43.1%	0	-	benign(0.01)	tolerated(0.28)	neutral(0.032)	HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like
GANC	2595	genome.wustl.edu	37	15	42622813	42622813	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198141.2	+1	reviewed	p.G562W	1.000	355	0%	127	40.2%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases
GANC	2595	genome.wustl.edu	37	15	42630590	42630590	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198141.2	+1	reviewed	p.A582V	1.000	109	0%	44	38.6%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases
CAPN3	825	genome.wustl.edu	37	15	42681142	42681142	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000070.2	+1	reviewed	p.E217K	1.000	82	0%	43	30.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_C2,HMMSmart_SM00230,superfamily_Cysteine proteinases
ZFP106	64397	genome.wustl.edu	37	15	42729518	42729518	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022473.1	-1	provisional	p.H1530R	1.000	327	0%	178	38.2%	10	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
ZFP106	64397	genome.wustl.edu	37	15	42731344	42731344	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022473.1	-1	provisional	p.K1454N	0.992	466	0%	218	44%	11	27.2%	benign(0.025)	deleterious(0.02)	neutral(0.384)	NULL
LRRC57	255252	genome.wustl.edu	37	15	42839521	42839521	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153260.2	-1	validated	p.R144*	1.000	90	0%	49	36.7%	9	33.3%	-	-	-	HMMPfam_LRR_1,superfamily_SSF52058
STARD9	57519	genome.wustl.edu	37	15	42973735	42973735	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001129482.3	+1	model	p.I616L	0.037	36	0%	38	44.7%	1	0%	benign(0.144)	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42984415	42984415	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001129482.3	+1	model	p.N3461H	0.034	26	0%	17	29.4%	3	0%	possibly_damaging(0.745)	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42985145	42985145	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001129482.3	+1	model	p.T3704I	0.000	50	0%	31	54.8%	0	-	possibly_damaging(0.846)	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42985380	42985380	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001129482.3	+1	model	p.G3782	0.000	59	0%	41	36.6%	2	50%	-	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	43010377	43010377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001129482.3	+1	model	p.V4502M	1.000	21	0%	20	35%	3	33.3%	probably_damaging(0.981)	-	-	superfamily_Bet v1-like
CDAN1	146059	genome.wustl.edu	37	15	43021251	43021251	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138477.2	-1	reviewed	p.R872I	1.000	88	0%	54	46.3%	7	14.2%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
UBR1	197131	genome.wustl.edu	37	15	43296048	43296048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174916.2	-1	reviewed	p.V1166M	0.996	104	0%	67	44.8%	5	40%	benign(0.198)	tolerated(0.1)	neutral(0.305)	NULL
UBR1	197131	genome.wustl.edu	37	15	43318806	43318806	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174916.2	-1	reviewed	p.D830Y	1.000	530	0.2%	194	36.1%	5	80%	possibly_damaging(0.819)	deleterious(0.01)	deleterious(0.715)	NULL
UBR1	197131	genome.wustl.edu	37	15	43347006	43347006	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174916.2	-1	reviewed	p.K458T	1.000	401	0%	173	37.6%	9	55.5%	benign(0.046)	tolerated(0.28)	neutral(0.034)	NULL
TGM7	116179	genome.wustl.edu	37	15	43574124	43574124	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052955.2	-1	validated	p.S423	0.000	32	0%	41	63.4%	1	100%	-	-	-	superfamily_SSF54001
LCMT2	9836	genome.wustl.edu	37	15	43621880	43621880	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014793.3	-1	reviewed	p.D270N	1.000	15	0%	18	55.6%	4	25%	benign(0.09)	tolerated(0.2)	neutral(0.056)	HMMPfam_LCM,superfamily_SSF53335
ZSCAN29	146050	genome.wustl.edu	37	15	43656579	43656579	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152455.3	-1	validated	p.G408	1.000	33	0%	24	33.3%	5	40%	-	-	-	NULL
ZSCAN29	146050	genome.wustl.edu	37	15	43658653	43658653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152455.3	-1	validated	p.R293W	1.000	48	0%	44	18.2%	4	0%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
MAP1A	4130	genome.wustl.edu	37	15	43818161	43818161	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002373.5	+1	reviewed	p.K1497T	0.000	116	0%	91	22%	1	100%	benign(0.079)	deleterious(0.02)	neutral(0.389)	NULL
MAP1A	4130	genome.wustl.edu	37	15	43818871	43818871	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002373.5	+1	reviewed	p.P1734T	0.793	22	0%	22	22.7%	2	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
CATSPER2	117155	genome.wustl.edu	37	15	43940191	43940191	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172095.1	-1	reviewed	p.I23	0.993	68	0%	54	20.4%	1	100%	-	-	-	NULL
PDIA3	2923	genome.wustl.edu	37	15	44061728	44061728	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005313.4	+1	reviewed	p.E384*	1.000	728	0%	339	43.7%	173	2.3%	-	-	-	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin
SERINC4	619189	genome.wustl.edu	37	15	44088416	44088416	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000299969	-1	known	p.P285H	0.998	160	0%	103	50.5%	1	0%	benign(0.001)	tolerated(0.09)	neutral(0.296)	NULL
CASC4	113201	genome.wustl.edu	37	15	44695087	44695087	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138423.2	+1	reviewed	p.R359*	1.000	138	0%	66	53%	23	13%	-	-	-	NULL
CTDSPL2	51496	genome.wustl.edu	37	15	44776447	44776447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016396.2	+1	validated	p.R71Q	1.000	288	0%	114	50%	10	20%	possibly_damaging(0.754)	tolerated(0.3)	neutral(0.307)	NULL
SPG11	80208	genome.wustl.edu	37	15	44881584	44881584	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025137.3	-1	reviewed	p.P1591H	0.001	68	0%	48	45.8%	9	22.2%	benign(0.123)	tolerated(0.33)	neutral(0.034)	NULL
SPG11	80208	genome.wustl.edu	37	15	44891005	44891005	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025137.3	-1	reviewed	p.V1239A	0.000	141	0.7%	81	37%	10	60%	benign(0.013)	tolerated(0.89)	neutral(0.001)	NULL
SPG11	80208	genome.wustl.edu	37	15	44921531	44921531	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025137.3	-1	reviewed	p.S597	0.997	368	0%	159	34%	6	50%	-	-	-	NULL
SPG11	80208	genome.wustl.edu	37	15	44951472	44951472	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025137.3	-1	reviewed	p.S158P	1.000	232	0%	99	41.4%	5	20%	probably_damaging(1)	tolerated(0.22)	deleterious(0.542)	NULL
PATL2	197135	genome.wustl.edu	37	15	44960623	44960623	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145112.1	-1	validated	p.E428K	0.967	167	0%	98	91.8%	0	-	benign(0.007)	tolerated(0.73)	neutral(0.002)	HMMPfam_PAT1
SORD	6652	genome.wustl.edu	37	15	45357548	45357548	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003104.4	+1	validated	p.G169R	1.000	69	0%	39	43.6%	37	5.4%	possibly_damaging(0.443)	tolerated(0.14)	neutral(0.394)	superfamily_GroES-like,superfamily_NAD(P)-binding Rossmann-fold domains
SORD	6652	genome.wustl.edu	37	15	45360378	45360378	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003104.4	+1	validated	e6-1	1.000	179	0%	130	35.4%	0	-	-	-	-	-
DUOX2	50506	genome.wustl.edu	37	15	45388081	45388081	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014080.4	-1	reviewed	p.R1342H	0.999	34	0%	27	40.7%	0	-	possibly_damaging(0.73)	tolerated(0.11)	deleterious(0.538)	HMMPfam_FAD_binding_8,superfamily_Riboflavin synthase domain-like
DUOX2	50506	genome.wustl.edu	37	15	45399567	45399567	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014080.4	-1	reviewed	p.P557S	0.577	80	0%	55	34.5%	1	0%	benign(0)	tolerated(0.56)	neutral(0.006)	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
DUOXA2	405753	genome.wustl.edu	37	15	45406943	45406943	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207581.3	+1	reviewed	p.G47D	1.000	79	0%	66	39.4%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_DuoxA
DUOXA1	90527	genome.wustl.edu	37	15	45413285	45413285	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144565.2	-1	provisional	p.G114R	1.000	30	0%	33	45.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_DuoxA
DUOX1	53905	genome.wustl.edu	37	15	45430172	45430172	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017434.3	+1	reviewed	p.S358F	0.998	43	0%	40	57.5%	1	0%	benign(0.001)	tolerated(0.45)	neutral(0.012)	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
GATM	2628	genome.wustl.edu	37	15	45658378	45658378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001482.2	-1	reviewed	p.R282C	1.000	169	0%	104	52.9%	16	43.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Amidinotransf,superfamily_Pentein
SPATA5L1	79029	genome.wustl.edu	37	15	45702632	45702632	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024063.2	+1	validated	p.P446	0.467	402	0%	171	40.4%	6	33.3%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
PLDN	26258	genome.wustl.edu	37	15	45895322	45895322	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012388.2	+1	reviewed	p.D83	0.897	384	0%	122	37.7%	8	12.5%	-	-	-	NULL
SQRDL	58472	genome.wustl.edu	37	15	45954319	45954319	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021199.2	+1	provisional	p.E134G	1.000	70	0%	55	36.4%	29	41.3%	benign(0.004)	tolerated(0.39)	neutral(0.016)	HMMPfam_Pyr_redox_2,superfamily_SSF51905
SEMA6D	80031	genome.wustl.edu	37	15	48057119	48057119	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153618.1	+1	reviewed	p.G431	0.979	109	0%	43	18.6%	1	0%	-	-	-	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
SEMA6D	80031	genome.wustl.edu	37	15	48058065	48058065	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153618.1	+1	reviewed	e13-1	1.000	155	0%	51	41.2%	0	-	-	-	-	-
SLC24A5	283652	genome.wustl.edu	37	15	48413266	48413266	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_205850.2	+1	reviewed	p.W9G	0.018	30	0%	18	38.9%	0	-	possibly_damaging(0.78)	deleterious(0)	deleterious(0.736)	NULL
MYEF2	50804	genome.wustl.edu	37	15	48435178	48435178	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016132.3	-1	validated	p.K577T	1.000	465	0%	173	45.7%	13	53.8%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
SLC12A1	6557	genome.wustl.edu	37	15	48500038	48500038	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000338.2	+1	reviewed	p.D41G	1.000	174	0%	80	35%	0	-	benign(0.268)	tolerated(0.08)	neutral(0.329)	NULL
SLC12A1	6557	genome.wustl.edu	37	15	48518752	48518752	+	Silent	SNP	C	C	T	rs141106709	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000338.2	+1	reviewed	p.N236	1.000	328	0%	126	43.7%	0	-	-	-	-	HMMPfam_AA_permease
SLC12A1	6557	genome.wustl.edu	37	15	48521466	48521466	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000338.2	+1	reviewed	p.A269T	1.000	341	0%	161	40.4%	0	-	benign(0.202)	tolerated(0.2)	neutral(0.069)	HMMPfam_AA_permease
SLC12A1	6557	genome.wustl.edu	37	15	48593527	48593527	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000338.2	+1	reviewed	p.R1038*	1.000	138	0.7%	76	47.4%	0	-	-	-	-	NULL
FBN1	2200	genome.wustl.edu	37	15	48725105	48725105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000138.4	-1	reviewed	p.P2233S	1.000	108	0%	34	38.2%	6	16.6%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin
FBN1	2200	genome.wustl.edu	37	15	48741037	48741037	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000138.4	-1	reviewed	p.D1867N	1.000	230	0%	63	57.1%	6	16.6%	probably_damaging(1)	tolerated(0.7)	deleterious(0.502)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN1	2200	genome.wustl.edu	37	15	48741073	48741073	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000138.4	-1	reviewed	p.E1855*	1.000	197	0.5%	56	26.8%	4	0%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
CEP152	22995	genome.wustl.edu	37	15	49033889	49033889	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014985.2	-1	provisional	p.K1278N	1.000	408	0%	240	48.7%	3	33.3%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
SHC4	399694	genome.wustl.edu	37	15	49127057	49127057	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203349.3	-1	validated	p.R549Q	1.000	109	0%	72	37.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
SECISBP2L	9728	genome.wustl.edu	37	15	49292062	49292062	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014701.2	-1	provisional	p.V746I	1.000	103	0%	41	41.5%	15	53.3%	probably_damaging(0.974)	tolerated(0.1)	deleterious(0.702)	HMMPfam_Ribosomal_L7Ae,superfamily_SSF55315
SLC27A2	11001	genome.wustl.edu	37	15	50474951	50474951	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003645.3	+1	reviewed	p.L109	0.996	5	0.000	20	0.500	2	50%	-	-	-	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
HDC	3067	genome.wustl.edu	37	15	50535043	50535043	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002112.2	-1	validated	p.R468Q	0.295	23	0%	19	68.4%	0	-	benign(0.001)	tolerated(0.54)	neutral(0.007)	superfamily_PyrdxlP-dep_Trfase_major
GABPB1	2553	genome.wustl.edu	37	15	50570858	50570858	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005254.5	-1	reviewed	p.R387C	0.697	473	0%	199	40.2%	8	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GABPB1	2553	genome.wustl.edu	37	15	50593480	50593480	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005254.5	-1	reviewed	p.G186E	1.000	292	0%	161	17.4%	23	8.6%	possibly_damaging(0.659)	tolerated(0.2)	neutral(0.282)	NULL
USP8	9101	genome.wustl.edu	37	15	50751275	50751275	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128610.1	+1	validated	p.R138	0.972	341	0%	161	36.6%	10	30%	-	-	-	NULL
USP8	9101	genome.wustl.edu	37	15	50790820	50790820	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128610.1	+1	validated	p.Q1022H	0.997	272	0%	100	44%	23	39.1%	benign(0.222)	deleterious(0.01)	neutral(0.428)	HMMPfam_UCH,superfamily_SSF54001
TRPM7	54822	genome.wustl.edu	37	15	50884331	50884331	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017672.4	-1	reviewed	p.Q1367H	0.989	120	0%	76	39.5%	7	42.8%	benign(0)	deleterious(0.04)	neutral(0.349)	NULL
CYP19A1	1588	genome.wustl.edu	37	15	51510814	51510814	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000103.3	-1	reviewed	p.A223T	1.000	242	0%	89	39.3%	0	-	probably_damaging(1)	tolerated(1)	deleterious(0.500)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP19A1	1588	genome.wustl.edu	37	15	51535062	51535062	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000103.3	-1	reviewed	p.I16	0.999	195	0%	110	57.3%	0	-	-	-	-	NULL
DMXL2	23312	genome.wustl.edu	37	15	51773042	51773042	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015263.3	-1	validated	p.I2087M	0.994	193	0%	83	42.2%	3	66.6%	unknown(0)	tolerated(0.1)	-	superfamily_WD40 repeat-like
DMXL2	23312	genome.wustl.edu	37	15	51828437	51828437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015263.3	-1	validated	p.R747Q	1.000	132	0.8%	65	36.9%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00320
DMXL2	23312	genome.wustl.edu	37	15	51839487	51839487	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015263.3	-1	validated	p.L229S	1.000	208	0%	63	17.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
SCG3	29106	genome.wustl.edu	37	15	51975512	51975512	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013243.3	+1	reviewed	p.S93F	0.397	311	0%	111	53.2%	0	-	benign(0.057)	deleterious(0)	neutral(0.448)	NULL
TMOD2	29767	genome.wustl.edu	37	15	52075002	52075002	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014548.3	+1	reviewed	p.R237C	1.000	46	0%	37	51.4%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Tropomodulin,superfamily_SSF52047
MAPK6	5597	genome.wustl.edu	37	15	52350869	52350869	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002748.3	+1	reviewed	p.S247Y	1.000	148	0%	63	49.2%	19	36.8%	probably_damaging(1)	tolerated(0.4)	deleterious(0.516)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MYO5C	55930	genome.wustl.edu	37	15	52486116	52486116	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018728.2	-1	validated	p.F1738V	1.000	217	0%	92	44.6%	13	61.5%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	NULL
ONECUT1	3175	genome.wustl.edu	37	15	53049780	53049780	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004498.1	-1	provisional	p.S457Y	1.000	274	0%	110	37.3%	0	-	possibly_damaging(0.8)	deleterious(0)	deleterious(0.746)	superfamily_Homeodomain-like
ONECUT1	3175	genome.wustl.edu	37	15	53081406	53081406	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004498.1	-1	provisional	p.L226F	1.000	8	0.000	26	0.346	0	-	possibly_damaging(0.91)	tolerated(0.11)	deleterious(0.634)	NULL
UNC13C	440279	genome.wustl.edu	37	15	54306861	54306861	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080534.1	+1	provisional	p.W587*	1.000	117	0%	50	28%	0	-	-	-	-	NULL
UNC13C	440279	genome.wustl.edu	37	15	54435232	54435232	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080534.1	+1	provisional	p.E1001*	1.000	606	0%	210	44.3%	0	-	-	-	-	NULL
UNC13C	440279	genome.wustl.edu	37	15	54586098	54586098	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080534.1	+1	provisional	p.C1275Y	1.000	339	0%	172	40.1%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
UNC13C	440279	genome.wustl.edu	37	15	54792347	54792347	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080534.1	+1	provisional	p.A1711T	1.000	317	0.6%	89	44.9%	0	-	possibly_damaging(0.762)	deleterious(0)	deleterious(0.727)	NULL
UNC13C	440279	genome.wustl.edu	37	15	54825157	54825157	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080534.1	+1	provisional	p.F1863	0.605	291	0%	75	56%	0	-	-	-	-	NULL
PIGB	9488	genome.wustl.edu	37	15	55613570	55613570	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004855.4	+1	reviewed	p.K133N	0.429	368	0%	179	44.1%	4	75%	benign(0.067)	deleterious(0.04)	neutral(0.353)	HMMPfam_Glyco_transf_22
CCPG1	9236	genome.wustl.edu	37	15	55657465	55657465	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004748.3	-1	validated	p.I250T	0.694	272	0%	73	13.7%	17	23.5%	unknown(0)	tolerated(0.36)	-	NULL
DYX1C1	161582	genome.wustl.edu	37	15	55731679	55731679	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130810.2	-1	reviewed	p.D295G	1.000	422	0%	200	37.5%	2	50%	possibly_damaging(0.767)	deleterious(0.02)	deleterious(0.667)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
DYX1C1	161582	genome.wustl.edu	37	15	55789941	55789941	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130810.2	-1	reviewed	p.A80	0.000	217	0.5%	158	15.8%	8	0%	unknown(0)	-	-	superfamily_HSP20-like chaperones
PYGO1	26108	genome.wustl.edu	37	15	55881017	55881017	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015617.1	-1	provisional	p.K12*	0.897	43	0%	27	40.7%	0	-	-	-	-	NULL
RFX7	64864	genome.wustl.edu	37	15	56387374	56387374	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022841.5	-1	validated	p.S851Y	1.000	190	1.1%	76	43.4%	8	37.5%	probably_damaging(0.966)	deleterious(0.01)	deleterious(0.814)	NULL
ZNF280D	54816	genome.wustl.edu	37	15	56946659	56946659	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017661.2	-1	validated	p.D700	1.000	269	0%	87	18.4%	5	0%	-	-	-	HMMSmart_SM00355
ZNF280D	54816	genome.wustl.edu	37	15	56970870	56970870	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017661.2	-1	validated	p.E385G	1.000	199	0%	90	47.8%	3	0%	benign(0.024)	deleterious(0.04)	neutral(0.350)	NULL
ZNF280D	54816	genome.wustl.edu	37	15	56993109	56993109	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002844.1	-1	validated	p.R135W	0.944	176	0%	91	18.7%	0	-	-	-	-	NULL
TCF12	6938	genome.wustl.edu	37	15	57524985	57524985	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207036.1	+1	reviewed	p.S301R	1.000	188	0%	60	26.7%	97	17.5%	possibly_damaging(0.667)	tolerated(0.08)	deleterious(0.536)	NULL
TCF12	6938	genome.wustl.edu	37	15	57526290	57526290	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207036.1	+1	reviewed	p.G340	0.998	256	0%	62	35.5%	80	55%	-	-	-	NULL
TCF12	6938	genome.wustl.edu	37	15	57545514	57545514	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207036.1	+1	reviewed	p.R439W	0.971	113	0%	44	47.7%	78	48.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CGNL1	84952	genome.wustl.edu	37	15	57734610	57734610	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032866.3	+1	validated	p.N579	1.000	207	0%	88	14.8%	6	16.6%	-	-	-	NULL
HSP90AB4P	664618	genome.wustl.edu	37	15	58983612	58983612	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380522	-1	known	p.A403V	1.000	49	0%	29	31%	1	100%	-	-	-	superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_HSP90
FAM63B	54629	genome.wustl.edu	37	15	59064077	59064077	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040450.1	+1	validated	p.C161	1.000	7	0.000	10	0.800	7	42.8%	-	-	-	NULL
SLTM	79811	genome.wustl.edu	37	15	59182632	59182632	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024755.2	-1	validated	p.R643*	1.000	112	0%	54	50%	27	0%	-	-	-	NULL
RNF111	54778	genome.wustl.edu	37	15	59383284	59383284	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017610.6	+1	reviewed	p.L890F	1.000	273	0%	96	16.7%	10	20%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
CCNB2	9133	genome.wustl.edu	37	15	59415775	59415775	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004701.2	+1	reviewed	p.Q345	1.000	146	0%	68	50%	114	47.3%	-	-	-	HMMPfam_Cyclin_C,HMMSmart_SM00385,superfamily_Cyclin-like
LDHAL6B	92483	genome.wustl.edu	37	15	59499541	59499541	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033195.1	+1	provisional	p.V134	0.985	115	0%	111	38.7%	1	100%	-	-	-	HMMPfam_Ldh_1_N,superfamily_NAD(P)-bd
LOC100130107	100130107	genome.wustl.edu	37	15	60060891	60060891	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001719310.2	-1	model	p.D119G	1.000	98	0%	27	29.6%	1221	0.3%	-	-	-	NULL
ANXA2	302	genome.wustl.edu	37	15	60656636	60656636	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002858.2	-1	reviewed	p.T97A	1.000	120	0%	62	12.9%	837	6.6%	benign(0.248)	tolerated(0.51)	neutral(0.034)	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_SM00335
NARG2	79664	genome.wustl.edu	37	15	60741288	60741288	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024611.4	-1	validated	p.E626D	0.676	212	0%	92	39.1%	8	87.5%	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	NULL
VPS13C	54832	genome.wustl.edu	37	15	62160127	62160127	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001018088.1	-1	validated	p.E3628G	1.000	280	0%	86	41.9%	0	-	probably_damaging(0.98)	deleterious(0.01)	deleterious(0.830)	NULL
VPS13C	54832	genome.wustl.edu	37	15	62170930	62170930	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020821.1	-1	validated	p.S3340P	1.000	180	0%	43	37.2%	18	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
VPS13C	54832	genome.wustl.edu	37	15	62204163	62204163	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020821.1	-1	validated	p.R2864Q	1.000	228	0%	94	41.5%	8	25%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_DUF1162
VPS13C	54832	genome.wustl.edu	37	15	62219413	62219413	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020821.1	-1	validated	p.S2131	0.028	90	0%	47	51.1%	10	50%	-	-	-	NULL
VPS13C	54832	genome.wustl.edu	37	15	62233987	62233987	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020821.1	-1	validated	p.E1810K	0.784	152	0%	60	48.3%	7	57.1%	benign(0.002)	tolerated(0.44)	neutral(0.013)	NULL
VPS13C	54832	genome.wustl.edu	37	15	62273647	62273647	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020821.1	-1	validated	p.V687A	0.993	165	0%	83	33.7%	5	60%	possibly_damaging(0.781)	deleterious(0)	deleterious(0.737)	NULL
LOC100289289	100289289	genome.wustl.edu	37	15	62539291	62539291	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343368.1	-1	model	p.E1104	0.945	37	0%	31	41.9%	0	-	-	-	-	NULL
TLN2	83660	genome.wustl.edu	37	15	62948248	62948248	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015059.2	+1	reviewed	p.S208L	1.000	109	0%	57	49.1%	4	50%	probably_damaging(0.964)	deleterious(0.01)	deleterious(0.812)	HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41
TLN2	83660	genome.wustl.edu	37	15	63000913	63000913	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015059.2	+1	reviewed	p.G795	0.268	15	0%	36	27.8%	6	50%	-	-	-	superfamily_SSF109885
TLN2	83660	genome.wustl.edu	37	15	63112737	63112737	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015059.2	+1	reviewed	p.L2310	0.976	72	0%	48	45.8%	11	54.5%	-	-	-	superfamily_SSF109885
LACTB	114294	genome.wustl.edu	37	15	63419597	63419597	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032857.2	+1	reviewed	p.R221C	1.000	117	0%	50	44%	14	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Beta-lactamase,superfamily_beta-lactamase/transpeptidase-like
CA12	771	genome.wustl.edu	37	15	63638889	63638889	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001218.3	-1	reviewed	p.S42	0.991	68	0%	52	15.4%	23	13%	-	-	-	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase
USP3	9960	genome.wustl.edu	37	15	63883013	63883013	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006537.2	+1	validated	p.S517	0.000	63	0%	61	27.9%	39	35.8%	-	-	-	NULL
HERC1	8925	genome.wustl.edu	37	15	63908817	63908817	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003922.3	-1	reviewed	p.L4585V	1.000	51	0%	26	46.2%	8	25%	probably_damaging(0.971)	-	-	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
HERC1	8925	genome.wustl.edu	37	15	63918247	63918247	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003922.3	-1	reviewed	p.L4404	0.039	44	0%	27	33.3%	15	80%	-	-	-	NULL
HERC1	8925	genome.wustl.edu	37	15	63921012	63921012	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003922.3	-1	reviewed	p.L4323	0.731	77	0%	63	36.5%	16	56.2%	-	-	-	HMMPfam_RCC1,superfamily_RCC1/BLIP-II
HERC1	8925	genome.wustl.edu	37	15	63935704	63935704	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003922.3	-1	reviewed	p.R3744W	0.656	131	0%	67	49.3%	15	40%	probably_damaging(0.998)	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
HERC1	8925	genome.wustl.edu	37	15	63970057	63970057	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003922.3	-1	reviewed	p.E2353*	1.000	70	0%	35	42.9%	6	50%	-	-	-	NULL
HERC1	8925	genome.wustl.edu	37	15	64008586	64008586	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003922.3	-1	reviewed	p.E1355	1.000	279	0.4%	161	44.7%	1	100%	-	-	-	NULL
FAM96A	84191	genome.wustl.edu	37	15	64381017	64381017	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032231.4	-1	validated	p.P53L	1.000	304	0%	163	11%	50	4%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMPfam_DUF59
SNX1	6642	genome.wustl.edu	37	15	64410413	64410413	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003099.3	+1	reviewed	p.N123K	1.000	140	0%	65	27.7%	54	29.6%	benign(0.004)	tolerated(0.45)	neutral(0.012)	HMMPfam_Sorting_nexin
CSNK1G1	53944	genome.wustl.edu	37	15	64495339	64495339	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022048.3	-1	validated	p.T350N	1.000	182	0%	140	53.6%	6	66.6%	benign(0.062)	tolerated(0.62)	neutral(0.008)	NULL
ZNF609	23060	genome.wustl.edu	37	15	64970406	64970406	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015042.1	+1	provisional	p.R1165H	1.000	36	0%	15	60%	22	72.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PLEKHO2	80301	genome.wustl.edu	37	15	65147205	65147205	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025201.4	+1	validated	p.R83H	0.954	53	0%	48	43.8%	12	41.6%	probably_damaging(1)	tolerated(0.28)	deleterious(0.531)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
MTFMT	123263	genome.wustl.edu	37	15	65295439	65295439	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139242.3	-1	validated	p.K377	0.000	392	0%	166	38%	13	69.2%	-	-	-	NULL
CILP	8483	genome.wustl.edu	37	15	65489304	65489304	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003613.3	-1	reviewed	p.M1107T	1.000	28	0%	20	25%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CILP	8483	genome.wustl.edu	37	15	65490936	65490936	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003613.3	-1	reviewed	p.A563V	0.998	60	0%	41	41.5%	0	-	probably_damaging(0.99)	tolerated(0.07)	deleterious(0.760)	superfamily_Carboxypeptidase regulatory domain
IGDCC3	9543	genome.wustl.edu	37	15	65623788	65623788	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004884.3	-1	validated	p.E453A	1.000	4	0.000	12	0.333	0	-	benign(0.075)	tolerated(0.22)	neutral(0.047)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
SLC24A1	9187	genome.wustl.edu	37	15	65917311	65917311	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004727.2	+1	validated	p.L298S	0.000	40	0%	33	36.4%	3	33.3%	unknown(0)	deleterious(0)	-	NULL
SLC24A1	9187	genome.wustl.edu	37	15	65917658	65917658	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004727.2	+1	validated	p.A414S	0.000	44	0%	44	56.8%	3	100%	unknown(0)	tolerated(0.25)	-	NULL
DENND4A	10260	genome.wustl.edu	37	15	65957686	65957686	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144823.1	-1	validated	p.H1785Y	1.000	215	0%	95	37.9%	4	50%	benign(0)	tolerated(0.81)	neutral(0.001)	NULL
DIS3L	115752	genome.wustl.edu	37	15	66615856	66615856	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133375.3	+1	validated	p.R451C	0.999	159	0%	110	13.6%	16	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RNB
LCTL	197021	genome.wustl.edu	37	15	66853433	66853433	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207338.2	-1	validated	p.A206T	0.976	22	0%	26	65.4%	0	-	benign(0.01)	tolerated(0.06)	neutral(0.323)	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
LCTL	197021	genome.wustl.edu	37	15	66853434	66853434	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207338.2	-1	validated	p.M205I	0.963	23	0%	26	26.9%	0	-	benign(0.005)	tolerated(0.63)	neutral(0.004)	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
SMAD3	4088	genome.wustl.edu	37	15	67430400	67430400	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145103.1	+1	reviewed	p.G12	0.000	76	0%	59	22%	0	-	-	-	-	HMMPfam_MH1,HMMSmart_DWA
SMAD3	4088	genome.wustl.edu	37	15	67462911	67462911	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005902.3	+1	reviewed	p.P209	0.998	88	0%	72	38.9%	31	45.1%	-	-	-	superfamily_SMAD/FHA domain
SKOR1	390598	genome.wustl.edu	37	15	68118312	68118312	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031807.1	+1	provisional	p.P40L	0.998	6	0.000	13	0.385	0	-	possibly_damaging(0.671)	deleterious(0)	deleterious(0.682)	NULL
SKOR1	390598	genome.wustl.edu	37	15	68118905	68118905	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031807.1	+1	provisional	p.R238C	1.000	11	0%	31	51.6%	0	-	possibly_damaging(0.806)	deleterious(0.01)	deleterious(0.709)	superfamily_SAND_like,HMMPfam_c-SKI_SMAD_bind
FEM1B	10116	genome.wustl.edu	37	15	68582661	68582661	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015322.3	+1	provisional	p.D322A	1.000	81	0%	50	38%	16	56.2%	possibly_damaging(0.907)	deleterious(0.03)	deleterious(0.725)	superfamily_ANK
ITGA11	22801	genome.wustl.edu	37	15	68596195	68596195	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004439.1	-1	reviewed	p.D1137G	0.930	16	0%	15	53.3%	1	0%	possibly_damaging(0.653)	tolerated(0.2)	neutral(0.279)	superfamily_Integrin domains
ITGA11	22801	genome.wustl.edu	37	15	68617542	68617542	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004439.1	-1	reviewed	p.V750A	0.002	33	0%	34	50%	9	0%	benign(0.002)	deleterious(0.01)	neutral(0.406)	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
ITGA11	22801	genome.wustl.edu	37	15	68643055	68643055	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004439.1	-1	reviewed	p.I320	1.000	141	0%	97	37.1%	3	0%	-	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like,superfamily_Integrin alpha N-terminal domain
CORO2B	10391	genome.wustl.edu	37	15	68937509	68937509	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000261861	+1	known	p.R9H	1.000	18	0%	27	33.3%	0	-	benign(0.033)	tolerated(0.18)	neutral(0.058)	NULL
CORO2B	10391	genome.wustl.edu	37	15	68937670	68937670	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000261861	+1	known	p.G63S	0.998	16	0%	17	58.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40 repeat-like,HMMPfam_DUF1899
NOX5	79400	genome.wustl.edu	37	15	69331281	69331281	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024505.3	+1	validated	p.R468C	0.275	103	0%	73	43.8%	1	100%	probably_damaging(0.992)	deleterious(0.04)	deleterious(0.796)	HMMPfam_FAD_binding_8,superfamily_Riboflavin_synthase_like_b-brl
NOX5	79400	genome.wustl.edu	37	15	69348991	69348991	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024505.3	+1	validated	p.G733	0.961	124	0%	79	39.2%	0	-	-	-	-	HMMPfam_NAD_binding_6,superfamily_SSF52343
PAQR5	54852	genome.wustl.edu	37	15	69677068	69677068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001104554.1	+1	validated	p.D78N	1.000	86	0%	67	20.9%	1	0%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	HMMPfam_HlyIII
KIF23	9493	genome.wustl.edu	37	15	69737221	69737221	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138555.1	+1	reviewed	p.P824	0.621	48	0%	30	46.7%	37	35.1%	-	-	-	NULL
TLE3	7090	genome.wustl.edu	37	15	70349824	70349824	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005078.2	-1	validated	p.R412*	1.000	13	0%	14	35.7%	17	11.7%	-	-	-	NULL
TLE3	7090	genome.wustl.edu	37	15	70366931	70366931	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005078.2	-1	validated	p.A105T	1.000	48	0%	53	50.9%	26	53.8%	benign(0.358)	tolerated(0.22)	neutral(0.155)	HMMPfam_TLE_N
LRRC49	54839	genome.wustl.edu	37	15	71272451	71272451	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017691.2	+1	validated	p.R311	1.000	298	0%	90	48.9%	3	33.3%	-	-	-	NULL
NR2E3	10002	genome.wustl.edu	37	15	72109971	72109971	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014249.2	+1	reviewed	p.K393N	1.000	141	0.7%	109	54.1%	0	-	possibly_damaging(0.582)	deleterious(0.01)	deleterious(0.606)	HMMPfam_Hormone_recep,superfamily_Nuclear receptor ligand-binding domain
MYO9A	4649	genome.wustl.edu	37	15	72154896	72154896	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006901.2	-1	validated	p.Y2012	1.000	412	0%	178	38.2%	7	42.8%	-	-	-	HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_Cysteine-rich domain
MYO9A	4649	genome.wustl.edu	37	15	72192172	72192172	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006901.2	-1	validated	p.R1109I	0.998	87	0%	43	46.5%	2	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_P-loop containing nucleoside triphosphate hydrolases
PKM2	5315	genome.wustl.edu	37	15	72492041	72492041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002654.3	-1	reviewed	p.R516C	1.000	25	0%	15	46.7%	1566	46.2%	benign(0.093)	deleterious(0)	neutral(0.452)	HMMPfam_PK_C,superfamily_PK C-terminal domain-like
ENSG00000246762	0	genome.wustl.edu	37	15	72643212	72643212	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000498972	+1	known	NULL	0.001	8	0.000	7	0.571	0	-	-	-	-	-
GOLGA6B	55889	genome.wustl.edu	37	15	72954931	72954931	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018652.4	+1	reviewed	p.R396*	0.991	148	0%	138	31.2%	0	-	-	-	-	NULL
BBS4	585	genome.wustl.edu	37	15	73029923	73029923	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033028.3	+1	reviewed	p.K519E	0.304	137	0%	79	45.6%	14	71.4%	benign(0.002)	tolerated(0.65)	neutral(0.003)	NULL
LOC100287587	100287587	genome.wustl.edu	37	15	74032558	74032558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343351.1	+1	model	p.V34I	1.000	17	0%	28	53.6%	11	45.4%	-	-	-	NULL
LOXL1	4016	genome.wustl.edu	37	15	74239516	74239516	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005576.2	+1	reviewed	p.T486	1.000	41	0%	36	47.2%	27	29.6%	-	-	-	HMMPfam_Lysyl_oxidase
PML	5371	genome.wustl.edu	37	15	74290677	74290677	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033238.2	+1	reviewed	p.A154	0.426	15	0%	15	60%	39	41%	-	-	-	HMMPfam_zf-B_box,HMMSmart_SM00336
PML	5371	genome.wustl.edu	37	15	74327566	74327566	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033239.2	+1	reviewed	p.S588	0.000	13	0%	13	61.5%	29	41.3%	-	-	-	NULL
ENSG00000188447	0	genome.wustl.edu	37	15	74355185	74355185	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000339692	+1	known	p.E33D	1.000	11	0%	11	36.4%	0	-	-	-	-	HMMPfam_GED
CCDC33	80125	genome.wustl.edu	37	15	74626275	74626275	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000321374	+1	known	p.R290C	0.001	31	0%	26	19.2%	0	-	-	-	-	NULL
CYP11A1	1583	genome.wustl.edu	37	15	74636264	74636264	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000781.2	-1	reviewed	p.R232Q	0.977	37	0%	36	52.8%	1	100%	benign(0.052)	tolerated(0.12)	neutral(0.264)	HMMPfam_p450,superfamily_Cytochrome P450
SEMA7A	8482	genome.wustl.edu	37	15	74709958	74709958	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003612.3	-1	reviewed	p.D175G	0.176	12	0%	11	45.5%	7	28.5%	benign(0.014)	tolerated(0.09)	neutral(0.297)	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
CYP1A2	1544	genome.wustl.edu	37	15	75043555	75043555	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000761.3	+1	reviewed	p.A286D	1.000	29	0%	22	31.8%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_p450,superfamily_Cytochrome_P450
CSK	1445	genome.wustl.edu	37	15	75094141	75094141	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127190.1	+1	validated	p.S331	1.000	28	0%	25	60%	99	42.4%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
SCAMP2	10066	genome.wustl.edu	37	15	75143796	75143796	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005697.3	-1	reviewed	p.P124S	1.000	35	0%	24	45.8%	113	44.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SCAMP
MPI	4351	genome.wustl.edu	37	15	75185124	75185124	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002435.1	+1	reviewed	p.E156	1.000	33	0%	28	32.1%	43	39.5%	-	-	-	HMMPfam_PMI_typeI,superfamily_RmlC-like cupins
SIN3A	25942	genome.wustl.edu	37	15	75684802	75684802	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145357.1	-1	reviewed	p.G878*	1.000	385	0%	170	42.9%	10	30%	-	-	-	NULL
SNUPN	10073	genome.wustl.edu	37	15	75901916	75901916	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042581.1	-1	reviewed	p.R162Q	0.280	117	0%	76	42.1%	40	40%	benign(0.013)	tolerated(0.28)	neutral(0.032)	NULL
SNX33	257364	genome.wustl.edu	37	15	75942574	75942574	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153271.1	+1	provisional	p.R377	0.136	25	0%	13	30.8%	15	40%	-	-	-	HMMPfam_BAR_3_WASP_bdg
CSPG4	1464	genome.wustl.edu	37	15	75980982	75980982	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001897.4	-1	reviewed	p.E808D	0.988	9	0.000	9	0.667	3	0%	probably_damaging(0.992)	tolerated(0.43)	neutral(0.461)	NULL
ENSG00000187812	0	genome.wustl.edu	37	15	76073134	76073134	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000395215	+1	known	p.D128N	0.987	142	0.7%	108	44.4%	0	-	benign(0)	tolerated(1)	-	NULL
NRG4	145957	genome.wustl.edu	37	15	76254276	76254276	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138573.3	-1	validated	p.V48	0.998	154	0%	81	44.4%	0	-	-	-	-	superfamily_SSF57196
C15orf27	123591	genome.wustl.edu	37	15	76452494	76452494	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152335.2	+1	validated	p.S147	0.066	241	0%	197	37.6%	0	-	-	-	-	NULL
ETFA	2108	genome.wustl.edu	37	15	76588065	76588065	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000126.3	-1	reviewed	p.R18Q	0.999	94	0%	73	43.8%	39	35.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SCAPER	49855	genome.wustl.edu	37	15	77176169	77176169	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000303521	-1	known	p.E51D	0.002	613	0%	251	45.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LINGO1	84894	genome.wustl.edu	37	15	77907693	77907693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032808.5	-1	validated	p.A186T	1.000	20	0%	29	51.7%	28	32.1%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
CIB2	10518	genome.wustl.edu	37	15	78398116	78398116	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006383.2	-1	validated	p.F169	0.985	39	0%	38	42.1%	43	37.2%	-	-	-	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473
ACSBG1	23205	genome.wustl.edu	37	15	78463792	78463792	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015162.3	-1	reviewed	p.K723N	0.000	205	0%	116	35.3%	1	100%	possibly_damaging(0.602)	deleterious(0.01)	deleterious(0.614)	NULL
WDR61	80349	genome.wustl.edu	37	15	78578400	78578400	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025234.1	-1	provisional	p.D244	1.000	69	0%	25	60%	108	52.7%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
IREB2	3658	genome.wustl.edu	37	15	78790409	78790409	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004136.2	+1	validated	p.S939L	0.262	249	0%	125	52.8%	24	54.1%	benign(0)	deleterious(0.02)	neutral(0.383)	superfamily_Aconitase
RASGRF1	5923	genome.wustl.edu	37	15	79277428	79277428	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002891.4	-1	reviewed	p.A1128V	0.994	81	0%	34	32.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
RASGRF1	5923	genome.wustl.edu	37	15	79282603	79282603	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002891.4	-1	reviewed	p.G1064	0.899	208	0%	137	35.8%	1	0%	-	-	-	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
RASGRF1	5923	genome.wustl.edu	37	15	79324605	79324605	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002891.4	-1	reviewed	p.R338C	0.991	53	0%	46	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
ANKRD34C	390616	genome.wustl.edu	37	15	79585826	79585826	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343327.1	+1	model	p.M67T	1.000	75	0%	47	14.9%	0	-	possibly_damaging(0.475)	deleterious(0.04)	deleterious(0.505)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ARNT2	9915	genome.wustl.edu	37	15	80762590	80762590	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014862.3	+1	reviewed	p.R76W	1.000	27	0%	25	48%	10	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
ARNT2	9915	genome.wustl.edu	37	15	80806724	80806724	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014862.3	+1	reviewed	p.Y285	1.000	77	0%	56	44.6%	8	75%	-	-	-	NULL
ARNT2	9915	genome.wustl.edu	37	15	80845055	80845055	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014862.3	+1	reviewed	p.S343	0.114	83	0%	55	36.4%	16	37.5%	-	-	-	HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain)
ARNT2	9915	genome.wustl.edu	37	15	80867351	80867351	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014862.3	+1	reviewed	p.A471	0.000	192	0.5%	132	12.9%	32	9.3%	-	-	-	NULL
KIAA1199	57214	genome.wustl.edu	37	15	81229053	81229053	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018689.1	+1	validated	p.M1016I	1.000	189	0%	123	37.4%	4	50%	possibly_damaging(0.448)	tolerated(0.11)	neutral(0.418)	NULL
C15orf26	161502	genome.wustl.edu	37	15	81427691	81427691	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173528.2	+1	predicted	p.L50	0.569	159	0%	76	44.7%	2	0%	-	-	-	NULL
TMC3	342125	genome.wustl.edu	37	15	81625494	81625494	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080532.1	-1	provisional	p.R857*	0.972	115	0%	63	49.2%	2	50%	-	-	-	NULL
MEX3B	84206	genome.wustl.edu	37	15	82335533	82335533	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032246.3	-1	provisional	p.A560T	0.997	12	0%	11	45.5%	21	38%	possibly_damaging(0.706)	tolerated(0.61)	neutral(0.258)	superfamily_RING/U-box
MEX3B	84206	genome.wustl.edu	37	15	82335683	82335683	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032246.3	-1	provisional	p.L510I	1.000	15	0%	14	42.9%	23	52.1%	benign(0.073)	tolerated(0.2)	neutral(0.054)	superfamily_RING/U-box
MEX3B	84206	genome.wustl.edu	37	15	82336602	82336602	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032246.3	-1	provisional	p.P203	0.010	11	0%	13	61.5%	30	53.3%	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
EFTUD1	79631	genome.wustl.edu	37	15	82456239	82456239	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024580.5	-1	validated	p.E613K	1.000	186	0%	100	49%	11	54.5%	possibly_damaging(0.905)	tolerated(0.9)	neutral(0.359)	superfamily_EF-G C-terminal domain-like
EFTUD1	79631	genome.wustl.edu	37	15	82512525	82512525	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024580.5	-1	validated	p.R446	0.822	100	0%	43	32.6%	15	53.3%	-	-	-	superfamily_Translation proteins
FAM154B	283726	genome.wustl.edu	37	15	82563946	82563946	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008226.1	+1	predicted	p.S19L	0.994	228	0%	69	43.5%	0	-	benign(0.287)	deleterious(0.03)	neutral(0.453)	NULL
CPEB1	64506	genome.wustl.edu	37	15	83240227	83240227	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030594.3	-1	reviewed	p.A82	1.000	95	0%	74	50%	0	-	-	-	-	NULL
FSD2	123722	genome.wustl.edu	37	15	83434736	83434736	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007122.2	-1	provisional	p.P534L	0.994	8	0.000	9	0.444	0	-	possibly_damaging(0.631)	tolerated(0.12)	deleterious(0.481)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
HOMER2	9455	genome.wustl.edu	37	15	83523469	83523469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199330.1	-1	reviewed	p.S204L	0.998	9	0.000	12	0.417	103	44.6%	possibly_damaging(0.68)	deleterious(0)	deleterious(0.687)	NULL
SH3GL3	6457	genome.wustl.edu	37	15	84286968	84286968	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003027.3	+1	validated	p.G325*	1.000	118	0%	61	47.5%	1	0%	-	-	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
ADAMTSL3	57188	genome.wustl.edu	37	15	84651311	84651311	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207517.2	+1	validated	p.I977	0.828	32	0%	24	45.8%	1	0%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
ZSCAN2	54993	genome.wustl.edu	37	15	85164586	85164586	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181877.3	+1	reviewed	p.E387V	1.000	38	0%	25	44%	5	20%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_C2H2 and C2HC zinc fingers
ZSCAN2	54993	genome.wustl.edu	37	15	85165019	85165019	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181877.3	+1	reviewed	p.K531N	0.000	28	0%	23	52.2%	5	60%	benign(0.004)	deleterious(0.03)	neutral(0.364)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ALPK3	57538	genome.wustl.edu	37	15	85383337	85383337	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020778.4	+1	validated	p.T478I	0.997	40	0%	41	48.8%	5	0%	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	NULL
ALPK3	57538	genome.wustl.edu	37	15	85400448	85400448	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020778.4	+1	validated	p.V1029L	0.001	22	0%	23	43.5%	9	0%	benign(0.079)	-	-	NULL
PDE8A	5151	genome.wustl.edu	37	15	85664247	85664247	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002605.2	+1	validated	e18+2	0.997	107	0%	52	13.5%	0	-	-	-	-	-
AKAP13	11214	genome.wustl.edu	37	15	86251288	86251288	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006738.4	+1	reviewed	p.L1839	1.000	296	0%	142	40.8%	17	35.2%	-	-	-	HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_SSF57889
KLHL25	64410	genome.wustl.edu	37	15	86312633	86312633	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022480.3	-1	validated	p.A137T	0.996	23	0%	38	28.9%	9	44.4%	benign(0.127)	deleterious(0)	neutral(0.455)	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB
NTRK3	4916	genome.wustl.edu	37	15	88576229	88576229	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012338.1	-1	reviewed	p.H482Y	1.000	17	0%	12	33.3%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
NTRK3	4916	genome.wustl.edu	37	15	88680697	88680697	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012338.1	-1	reviewed	p.L187P	1.000	42	0%	45	15.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00082
DET1	55070	genome.wustl.edu	37	15	89074352	89074352	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017996.3	-1	validated	p.I206	1.000	31	0%	21	52.4%	6	33.3%	-	-	-	HMMPfam_Det1
MIR1179	100302235	genome.wustl.edu	37	15	89151400	89151400	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000408703	+1	known	NULL	0.997	424	0%	241	42.7%	0	-	-	-	-	-
ACAN	176	genome.wustl.edu	37	15	89400158	89400158	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013227.3	+1	reviewed	p.I1333V	0.001	172	0%	82	35.4%	1	0%	benign(0.004)	tolerated(0.64)	neutral(0.003)	NULL
C15orf42	90381	genome.wustl.edu	37	15	90127527	90127527	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152259.3	+1	validated	p.E315D	0.095	80	0%	47	38.3%	0	-	benign(0.094)	tolerated(0.57)	neutral(0.013)	NULL
C15orf42	90381	genome.wustl.edu	37	15	90143853	90143853	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152259.3	+1	validated	p.K697T	1.000	136	0%	41	58.5%	3	66.6%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
C15orf42	90381	genome.wustl.edu	37	15	90167098	90167098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152259.3	+1	validated	p.T1186I	0.024	93	0%	57	47.4%	6	83.3%	possibly_damaging(0.809)	tolerated(0.1)	deleterious(0.591)	NULL
KIF7	374654	genome.wustl.edu	37	15	90176162	90176162	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198525.2	-1	validated	p.A928	0.784	18	0%	17	70.6%	15	33.3%	-	-	-	NULL
KIF7	374654	genome.wustl.edu	37	15	90177075	90177075	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198525.2	-1	validated	p.S812P	1.000	15	0%	10	40%	13	46.1%	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	NULL
KIF7	374654	genome.wustl.edu	37	15	90191960	90191960	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198525.2	-1	validated	p.I323	0.934	11	0%	10	40%	14	64.2%	-	-	-	HMMPfam_Kinesin,HMMSmart_KISc,superfamily_SSF52540
PEX11A	8800	genome.wustl.edu	37	15	90227074	90227074	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003847.1	-1	provisional	p.R93H	1.000	80	0%	61	42.6%	18	27.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PEX11
ANPEP	290	genome.wustl.edu	37	15	90349598	90349598	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001150.2	-1	reviewed	p.R73C	0.046	51	0%	41	12.2%	2	0%	probably_damaging(0.968)	deleterious(0.02)	deleterious(0.793)	superfamily_SSF63737
C15orf38	348110	genome.wustl.edu	37	15	90451588	90451588	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182616.2	-1	validated	p.D75	0.931	64	0%	42	42.9%	43	53.4%	-	-	-	HMMPfam_UPF0552
C15orf38	348110	genome.wustl.edu	37	15	90451591	90451591	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182616.2	-1	validated	p.F74	0.470	60	0%	42	42.9%	43	34.8%	-	-	-	HMMPfam_UPF0552
C15orf38	348110	genome.wustl.edu	37	15	90454039	90454039	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182616.2	-1	validated	p.V35	0.996	64	0%	31	58.1%	11	54.5%	-	-	-	HMMPfam_UPF0552
ZNF710	374655	genome.wustl.edu	37	15	90610810	90610810	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198526.2	+1	validated	p.C147	0.829	25	0%	34	47.1%	7	57.1%	-	-	-	NULL
CIB1	10519	genome.wustl.edu	37	15	90774721	90774721	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006384.3	-1	validated	p.R72*	0.996	45	0%	54	42.6%	262	17.5%	-	-	-	superfamily_EF-hand
NGRN	51335	genome.wustl.edu	37	15	90814781	90814781	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033088.1	+1	validated	p.E213*	0.031	69	0%	28	35.7%	83	37.3%	-	-	-	HMMPfam_Neugrin
LOC728477	728477	genome.wustl.edu	37	15	90836945	90836945	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343383.1	+1	model	p.A51V	0.749	10	0.000	7	0.571	0	-	-	-	-	NULL
IQGAP1	8826	genome.wustl.edu	37	15	90996120	90996120	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003870.3	+1	reviewed	p.A426T	1.000	102	0%	50	54%	31	74.1%	possibly_damaging(0.858)	tolerated(0.07)	deleterious(0.650)	NULL
IQGAP1	8826	genome.wustl.edu	37	15	91025277	91025277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003870.3	+1	reviewed	p.R1139W	1.000	58	0%	33	36.4%	40	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_RasGAP,HMMSmart_SM00323,superfamily_GTPase activation domain GAP
CRTC3	64784	genome.wustl.edu	37	15	91147672	91147672	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022769.3	+1	validated	p.L157I	1.000	211	0%	155	45.2%	11	54.5%	possibly_damaging(0.942)	deleterious(0.02)	deleterious(0.770)	NULL
CRTC3	64784	genome.wustl.edu	37	15	91161163	91161163	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022769.3	+1	validated	p.P221L	0.995	231	0%	135	44.4%	13	15.3%	probably_damaging(0.999)	tolerated(0.27)	deleterious(0.524)	NULL
BLM	641	genome.wustl.edu	37	15	91312735	91312735	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000057.2	+1	reviewed	p.P825Q	1.000	91	0%	40	42.5%	5	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
FES	2242	genome.wustl.edu	37	15	91433159	91433159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002005.3	+1	reviewed	p.R339Q	0.000	8	0.000	13	0.538	4	0%	benign(0.002)	tolerated(0.59)	neutral(0.004)	NULL
MAN2A2	4122	genome.wustl.edu	37	15	91454463	91454463	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006122.2	+1	validated	p.S646	0.207	32	0%	27	55.6%	20	50%	-	-	-	superfamily_Gal_mut_like
PRC1	9055	genome.wustl.edu	37	15	91513664	91513664	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003981.2	-1	reviewed	p.P514	0.043	104	0%	58	10.3%	72	5.5%	-	-	-	HMMPfam_MAP65_ASE1
SV2B	9899	genome.wustl.edu	37	15	91795081	91795081	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014848.4	+1	validated	p.A162T	0.999	50	0%	34	50%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
CHD2	1106	genome.wustl.edu	37	15	93482841	93482841	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001271.3	+1	reviewed	p.P195	0.006	145	0.7%	78	29.5%	15	26.6%	-	-	-	NULL
CHD2	1106	genome.wustl.edu	37	15	93486101	93486101	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001271.3	+1	reviewed	p.A285	0.003	150	0%	64	37.5%	8	25%	-	-	-	HMMSmart_SM00298
CHD2	1106	genome.wustl.edu	37	15	93540224	93540224	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001271.3	+1	reviewed	p.K1211N	1.000	266	0%	129	42.6%	12	41.6%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MCTP2	55784	genome.wustl.edu	37	15	95019952	95019952	+	Missense_Mutation	SNP	G	G	A	rs187187495		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018349.3	+1	validated	p.R833Q	1.000	274	0%	86	47.7%	2	100%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	NULL
FAM169B	283777	genome.wustl.edu	37	15	98984374	98984374	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182562.2	-1	validated	p.E129K	0.066	68	0%	42	47.6%	0	-	benign(0)	tolerated(0.23)	neutral(0.042)	NULL
IGF1R	3480	genome.wustl.edu	37	15	99467225	99467225	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000875.3	+1	reviewed	p.Y869C	0.998	74	0%	47	46.8%	3	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
IGF1R	3480	genome.wustl.edu	37	15	99486276	99486276	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000875.3	+1	reviewed	p.D1194	0.366	41	0%	27	29.6%	4	75%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
IGF1R	3480	genome.wustl.edu	37	15	99500337	99500337	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000875.3	+1	reviewed	p.P1257H	1.000	45	0%	35	22.9%	13	38.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
SYNM	23336	genome.wustl.edu	37	15	99671320	99671320	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000336292	+1	known	p.E918K	0.031	37	0%	33	42.4%	1	0%	benign(0.04)	tolerated(0.19)	neutral(0.052)	NULL
LRRC28	123355	genome.wustl.edu	37	15	99796166	99796166	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144598.2	+1	provisional	p.A2S	1.000	129	0%	77	10.4%	2	50%	possibly_damaging(0.706)	tolerated(0.14)	deleterious(0.504)	NULL
LRRC28	123355	genome.wustl.edu	37	15	99874197	99874197	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144598.2	+1	provisional	p.R152K	1.000	215	0%	90	27.8%	7	42.8%	benign(0)	tolerated(0.23)	neutral(0.042)	HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like
ENSG00000214394	0	genome.wustl.edu	37	15	100332499	100332499	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398270	+1	known	p.H66	0.998	33	0%	41	36.6%	0	-	-	-	-	NULL
ADAMTS17	170691	genome.wustl.edu	37	15	100533313	100533313	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139057.2	-1	reviewed	p.A963	0.193	22	0%	27	37%	0	-	-	-	-	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
CHSY1	22856	genome.wustl.edu	37	15	101717611	101717611	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000254190	-1	known	p.G797	1.000	141	0%	87	52.9%	11	54.5%	-	-	-	NULL
CHSY1	22856	genome.wustl.edu	37	15	101718489	101718489	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000254190	-1	known	p.S505P	1.000	162	0%	102	51%	37	24.3%	probably_damaging(0.957)	tolerated(0.06)	deleterious(0.723)	HMMPfam_CHGN,superfamily_SSF53448
PCSK6	5046	genome.wustl.edu	37	15	101905181	101905181	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138325.2	-1	reviewed	p.S642Y	0.000	156	0%	96	47.9%	0	-	unknown(0)	deleterious(0.02)	-	NULL
TARSL2	123283	genome.wustl.edu	37	15	102252083	102252083	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152334.2	-1	validated	p.R271I	1.000	95	0%	37	40.5%	2	50%	benign(0.125)	deleterious(0.05)	neutral(0.356)	superfamily_ThrRS/AlaRS common domain
OR4F15	390649	genome.wustl.edu	37	15	102358676	102358676	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001674.1	+1	provisional	p.G96E	0.002	161	0%	92	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
NPRL3	8131	genome.wustl.edu	37	16	148286	148286	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000399953	-1	known	p.L261M	0.960	17	0%	16	37.5%	37	54%	possibly_damaging(0.778)	tolerated(0.55)	neutral(0.298)	HMMPfam_UPF0171
LUC7L	55692	genome.wustl.edu	37	16	240106	240106	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201412.1	-1	validated	p.R279W	1.000	10	0%	13	38.5%	126	41.2%	unknown(0)	tolerated(0.07)	-	NULL
ITFG3	83986	genome.wustl.edu	37	16	311465	311465	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032039.2	+1	validated	p.D220	0.000	15	0.000	7	0.857	79	44.3%	-	-	-	NULL
RGS11	8786	genome.wustl.edu	37	16	321556	321556	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183337.1	-1	reviewed	p.D224Y	0.237	111	0%	91	35.2%	3	100%	possibly_damaging(0.818)	deleterious(0)	deleterious(0.754)	HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain
PDIA2	64714	genome.wustl.edu	37	16	334573	334573	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006849.2	+1	validated	p.T129M	0.293	13	0%	15	60%	4	25%	possibly_damaging(0.78)	tolerated(0.07)	deleterious(0.611)	superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin
NME4	4833	genome.wustl.edu	37	16	454983	454983	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444498	+1	known	p.A214V	0.834	122	0%	122	19.7%	16	31.2%	unknown(0)	-	-	NULL
WDR90	197335	genome.wustl.edu	37	16	703745	703745	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145294.4	+1	provisional	e13-1	1.000	15	0%	15	26.7%	0	-	-	-	-	-
WDR24	84219	genome.wustl.edu	37	16	737359	737359	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032259.2	-1	provisional	p.T239	0.000	12	0%	12	33.3%	18	0%	-	-	-	superfamily_WD40 repeat-like
FAM173A	65990	genome.wustl.edu	37	16	772356	772356	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023933.1	+1	predicted	p.A169	0.992	9	0.000	8	0.500	44	61.3%	-	-	-	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
GNG13	51764	genome.wustl.edu	37	16	848773	848773	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016541.2	-1	validated	p.P50	0.790	48	0%	58	32.8%	0	-	-	-	-	HMMPfam_G-gamma,HMMSmart_GGL,superfamily_G-protein_gamma-like
CACNA1H	8912	genome.wustl.edu	37	16	1254131	1254131	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021098.2	+1	reviewed	p.E708D	0.958	3	0.000	7	0.571	1	0%	benign(0.001)	tolerated(0.53)	neutral(0.007)	NULL
CACNA1H	8912	genome.wustl.edu	37	16	1255242	1255242	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021098.2	+1	reviewed	p.F860	0.899	25	0%	23	52.2%	1	0%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
UBE2I	7329	genome.wustl.edu	37	16	1370573	1370573	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000402301	+1	known	p.G156	0.000	23	0%	23	43.5%	2	100%	-	-	-	NULL
C16orf91	283951	genome.wustl.edu	37	16	1470575	1470575	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010878.1	-1	provisional	p.R181Q	0.002	17	0%	18	44.4%	22	45.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CLCN7	1186	genome.wustl.edu	37	16	1499063	1499063	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001287.4	-1	reviewed	p.T567	0.002	18	0.000	8	0.500	56	37.5%	-	-	-	HMMPfam_Voltage_CLC,superfamily_Cl-channel_core
TELO2	9894	genome.wustl.edu	37	16	1552987	1552987	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016111.3	+1	reviewed	p.R609H	1.000	53	0%	47	48.9%	51	39.2%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Telomere_reg-2
TMEM204	79652	genome.wustl.edu	37	16	1604800	1604800	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024600.4	+1	provisional	p.G152R	1.000	58	0%	60	43.3%	13	7.6%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	NULL
CRAMP1L	57585	genome.wustl.edu	37	16	1716082	1716082	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020825.3	+1	validated	p.S921T	0.985	21	0%	26	34.6%	8	37.5%	possibly_damaging(0.621)	tolerated(0.51)	neutral(0.226)	NULL
TSC2	7249	genome.wustl.edu	37	16	2108765	2108765	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000548.3	+1	reviewed	p.A289V	1.000	38	0%	36	44.4%	17	29.4%	benign(0.106)	tolerated(0.24)	neutral(0.045)	superfamily_ARM repeat
TRAF7	84231	genome.wustl.edu	37	16	2221578	2221578	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032271.2	+1	validated	p.T149	0.255	15	0%	22	40.9%	66	48.4%	-	-	-	HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box
TRAF7	84231	genome.wustl.edu	37	16	2223261	2223261	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032271.2	+1	validated	p.L291	1.000	26	0%	22	31.8%	65	49.2%	-	-	-	superfamily_TRAF domain-like
E4F1	1877	genome.wustl.edu	37	16	2283011	2283011	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004424.3	+1	reviewed	e7-1	0.282	24	0%	18	66.7%	9	100%	-	-	-	-
ABCA3	21	genome.wustl.edu	37	16	2367711	2367711	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001089.2	-1	reviewed	p.L310I	1.000	39	2.6%	37	37.8%	6	50%	benign(0.008)	tolerated(1)	-	NULL
TBC1D24	57465	genome.wustl.edu	37	16	2546985	2546985	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020705.1	+1	provisional	p.T279M	0.139	11	0%	12	41.7%	10	40%	possibly_damaging(0.861)	tolerated(0.09)	deleterious(0.629)	superfamily_RabGAP_TBC
KCTD5	54442	genome.wustl.edu	37	16	2747978	2747978	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018992.3	+1	validated	p.R145*	1.000	217	0%	120	36.7%	13	0%	-	-	-	HMMSmart_BTB,superfamily_BTB/POZ_fold
KCTD5	54442	genome.wustl.edu	37	16	2752415	2752415	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018992.3	+1	validated	p.V204G	1.000	29	0%	34	38.2%	34	85.2%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	NULL
SRRM2	23524	genome.wustl.edu	37	16	2807474	2807474	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016333.3	+1	validated	p.Y82H	1.000	96	0%	55	32.7%	66	33.3%	unknown(0)	-	-	HMMPfam_cwf21
SRRM2	23524	genome.wustl.edu	37	16	2811914	2811914	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016333.3	+1	validated	p.R462H	1.000	43	0%	53	35.8%	79	51.8%	unknown(0)	-	-	NULL
SRRM2	23524	genome.wustl.edu	37	16	2819228	2819228	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016333.3	+1	validated	p.G2655V	0.999	63	0%	69	40.6%	327	47.4%	probably_damaging(1)	-	-	NULL
PRSS41	360226	genome.wustl.edu	37	16	2854547	2854547	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135086.1	+1	provisional	p.K246N	0.171	98	0%	75	38.7%	0	-	-	-	-	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys,PatternScan_TRYPSIN_SER
PKMYT1	9088	genome.wustl.edu	37	16	3026881	3026881	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004203.3	-1	reviewed	p.P54	1.000	7	0.000	10	0.500	43	37.2%	-	-	-	NULL
OR1F1	4992	genome.wustl.edu	37	16	3254945	3254945	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012360.1	+1	provisional	p.G233	0.003	129	0%	73	45.2%	1	100%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
MEFV	4210	genome.wustl.edu	37	16	3304166	3304166	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000243.2	-1	reviewed	p.S301L	0.001	37	0%	43	60.5%	0	-	benign(0.011)	deleterious(0)	neutral(0.445)	NULL
ZNF75A	7627	genome.wustl.edu	37	16	3367379	3367379	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153028.2	+1	validated	p.R134I	0.826	216	0%	128	46.9%	4	25%	possibly_damaging(0.669)	tolerated(0.05)	deleterious(0.583)	NULL
OR2C1	4993	genome.wustl.edu	37	16	3406817	3406817	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012368.2	+1	validated	p.R293W	0.988	12	0%	18	50%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_Family A G protein-coupled receptor-like
ZNF434	54925	genome.wustl.edu	37	16	3434673	3434673	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017810.2	-1	provisional	p.G128	0.585	55	0%	36	13.9%	2	0%	-	-	-	NULL
NLRC3	197358	genome.wustl.edu	37	16	3611706	3611706	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178844.2	-1	validated	p.I671T	1.000	19	0%	30	40%	0	-	possibly_damaging(0.768)	deleterious(0.01)	deleterious(0.691)	HMMSmart_SM00368,superfamily_RNI-like
SLX4	84464	genome.wustl.edu	37	16	3641304	3641304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032444.2	-1	provisional	p.V779M	0.018	53	0%	69	53.6%	4	50%	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
SLX4	84464	genome.wustl.edu	37	16	3645678	3645678	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032444.2	-1	provisional	p.P647	0.000	11	0%	23	52.2%	4	50%	-	-	-	NULL
SLX4	84464	genome.wustl.edu	37	16	3658652	3658652	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032444.2	-1	provisional	p.G105V	0.002	161	0%	157	13.4%	4	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DNASE1	1773	genome.wustl.edu	37	16	3706644	3706644	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005223.3	+1	reviewed	p.D109G	0.111	10	0%	16	43.8%	10	70%	benign(0.235)	tolerated(0.07)	neutral(0.343)	HMMPfam_Exo_endo_phos,superfamily_DNase I-like,HMMSmart_SM00476
ADCY9	115	genome.wustl.edu	37	16	4016628	4016628	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001116.2	-1	reviewed	p.F1070L	1.000	37	0%	30	43.3%	13	76.9%	possibly_damaging(0.823)	tolerated(0.45)	neutral(0.324)	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
ADCY9	115	genome.wustl.edu	37	16	4024697	4024697	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001116.2	-1	reviewed	p.S948L	0.027	204	0%	93	54.8%	10	10%	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
ADCY9	115	genome.wustl.edu	37	16	4164162	4164162	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001116.2	-1	reviewed	p.R428C	1.000	46	0%	55	43.6%	4	25%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
ADCY9	115	genome.wustl.edu	37	16	4164166	4164166	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001116.2	-1	reviewed	p.F426	0.823	40	0%	53	45.3%	7	57.1%	-	-	-	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
ADCY9	115	genome.wustl.edu	37	16	4164296	4164296	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001116.2	-1	reviewed	p.R383H	1.000	170	0%	111	41.4%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
ADCY9	115	genome.wustl.edu	37	16	4165068	4165068	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001116.2	-1	reviewed	p.A126T	1.000	14	0%	12	50%	5	40%	possibly_damaging(0.952)	tolerated(0.1)	deleterious(0.682)	NULL
SRL	6345	genome.wustl.edu	37	16	4242360	4242360	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098814.1	-1	validated	p.G406S	1.000	52	0%	50	60%	0	-	probably_damaging(0.987)	tolerated(0.59)	neutral(0.441)	NULL
GLIS2	84662	genome.wustl.edu	37	16	4385069	4385069	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032575.2	+1	reviewed	p.Q177H	1.000	15	0%	38	39.5%	11	36.3%	benign(0.01)	tolerated(0.15)	neutral(0.241)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
MGRN1	23295	genome.wustl.edu	37	16	4736259	4736259	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142290.1	+1	validated	e17-1	1.000	14	0%	19	52.6%	2	50%	-	-	-	-
NUDT16L1	84309	genome.wustl.edu	37	16	4745040	4745040	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032349.2	+1	provisional	p.V166M	0.987	14	0%	13	38.5%	87	44.8%	benign(0.189)	deleterious(0.01)	neutral(0.423)	NULL
ANKS3	124401	genome.wustl.edu	37	16	4747400	4747400	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133450.2	-1	provisional	p.A610S	0.002	16	0%	11	36.4%	13	46.1%	benign(0.059)	tolerated(0.05)	neutral(0.349)	NULL
GLYR1	84656	genome.wustl.edu	37	16	4867625	4867625	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032569.3	-1	validated	p.T294A	1.000	93	0%	70	20%	50	30%	probably_damaging(0.979)	tolerated(0.05)	deleterious(0.767)	HMMPfam_NAD_binding_2,superfamily_NAD(P)-binding Rossmann-fold domains
UBN1	29855	genome.wustl.edu	37	16	4910906	4910906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079514.1	+1	validated	p.A305T	0.998	59	0%	56	30.4%	15	20%	possibly_damaging(0.896)	tolerated(0.06)	deleterious(0.676)	NULL
UBN1	29855	genome.wustl.edu	37	16	4924785	4924785	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079514.1	+1	validated	p.G792R	0.010	19	0%	26	61.5%	26	50%	possibly_damaging(0.808)	deleterious(0.04)	deleterious(0.653)	NULL
UBN1	29855	genome.wustl.edu	37	16	4925134	4925134	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079514.1	+1	validated	p.I908T	0.799	38	0%	27	59.3%	13	38.4%	benign(0.006)	deleterious(0.04)	neutral(0.349)	NULL
SEC14L5	9717	genome.wustl.edu	37	16	5040864	5040864	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014692.1	+1	validated	p.A148T	1.000	38	0%	28	28.6%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PRELI
SEC14L5	9717	genome.wustl.edu	37	16	5046855	5046855	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014692.1	+1	validated	e7-1	1.000	163	0%	141	38.3%	0	-	-	-	-	-
RBFOX1	54715	genome.wustl.edu	37	16	7680678	7680678	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145891.2	+1	reviewed	p.T270	1.000	195	0%	97	39.2%	0	-	-	-	-	NULL
GRIN2A	2903	genome.wustl.edu	37	16	9928046	9928046	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000833.3	-1	reviewed	p.L565M	1.000	155	0%	63	49.2%	0	-	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	HMMPfam_Lig_chan,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II
TEKT5	146279	genome.wustl.edu	37	16	10788326	10788326	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144674.1	-1	provisional	p.E135D	0.999	11	0%	21	23.8%	0	-	benign(0.002)	tolerated(0.61)	neutral(0.004)	HMMPfam_Tektin
NUBP1	4682	genome.wustl.edu	37	16	10846484	10846484	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002484.2	+1	validated	p.I92	0.121	349	0%	205	44.4%	10	20%	-	-	-	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
NUBP1	4682	genome.wustl.edu	37	16	10850599	10850599	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002484.2	+1	validated	p.P138H	1.000	169	0%	118	37.3%	28	50%	probably_damaging(1)	tolerated(0.12)	deleterious(0.760)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
CIITA	4261	genome.wustl.edu	37	16	10996533	10996533	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000246.3	+1	reviewed	p.S216L	0.005	75	0%	55	47.3%	4	0%	benign(0.001)	tolerated(0.17)	neutral(0.059)	NULL
CIITA	4261	genome.wustl.edu	37	16	11000518	11000518	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000246.3	+1	reviewed	p.R390Q	1.000	3	0.000	8	0.625	0	-	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	NULL
CLEC16A	23274	genome.wustl.edu	37	16	11114164	11114164	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015226.2	+1	validated	p.E473fs	0.132	-	-	-	-	-	-	-	-	-	NULL
PRM3	58531	genome.wustl.edu	37	16	11367182	11367182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021247.1	-1	provisional	p.E91K	0.000	13	0%	14	50%	0	-	benign(0.224)	tolerated(0.35)	neutral(0.042)	NULL
TXNDC11	51061	genome.wustl.edu	37	16	11829887	11829887	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015914.5	-1	provisional	p.R153W	0.651	43	0%	29	13.8%	23	17.3%	possibly_damaging(0.871)	tolerated(0.13)	deleterious(0.591)	superfamily_Thiordxn-like_fd
TNFRSF17	608	genome.wustl.edu	37	16	12060077	12060077	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001192.2	+1	reviewed	p.T52	0.000	362	0%	193	42.5%	0	-	-	-	-	NULL
SHISA9	729993	genome.wustl.edu	37	16	13297323	13297323	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145204.2	+1	validated	p.P296L	1.000	96	1%	53	43.4%	3	0%	probably_damaging(1)	tolerated(0.7)	deleterious(0.502)	NULL
ERCC4	2072	genome.wustl.edu	37	16	14042107	14042107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005236.2	+1	reviewed	p.T885M	0.001	104	0%	62	11.3%	1	0%	benign(0.18)	tolerated(0.07)	neutral(0.336)	NULL
MKL2	57496	genome.wustl.edu	37	16	14306212	14306212	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014048.3	+1	validated	p.P74	0.924	300	0%	106	32.1%	8	62.5%	-	-	-	HMMSmart_RPEL
MKL2	57496	genome.wustl.edu	37	16	14340434	14340434	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014048.3	+1	validated	p.S439	0.000	40	2.5%	30	60%	7	42.8%	-	-	-	superfamily_SSF68906
MKL2	57496	genome.wustl.edu	37	16	14340952	14340952	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014048.3	+1	validated	p.R612Q	0.841	15	6.7%	15	40%	7	42.8%	possibly_damaging(0.798)	tolerated(0.6)	neutral(0.305)	NULL
MKL2	57496	genome.wustl.edu	37	16	14354882	14354882	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014048.3	+1	validated	p.Q911*	1.000	92	0%	42	33.3%	9	44.4%	-	-	-	NULL
PARN	5073	genome.wustl.edu	37	16	14722027	14722027	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002582.2	-1	reviewed	e3+2	0.997	243	0%	131	25.2%	0	-	-	-	-	-
PDXDC1	23042	genome.wustl.edu	37	16	15129390	15129390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015027.2	+1	validated	p.R696H	0.002	39	0%	29	17.2%	69	21.7%	benign(0.037)	tolerated(0.23)	neutral(0.044)	NULL
C16orf45	89927	genome.wustl.edu	37	16	15661905	15661905	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033201.2	+1	validated	p.A99V	1.000	57	0%	32	43.8%	2	0%	possibly_damaging(0.778)	tolerated(0.23)	neutral(0.332)	NULL
KIAA0430	9665	genome.wustl.edu	37	16	15695932	15695932	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014647.3	-1	validated	p.A1514	1.000	184	0%	113	38.9%	8	37.5%	-	-	-	NULL
KIAA0430	9665	genome.wustl.edu	37	16	15709801	15709801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014647.3	-1	validated	p.G1047C	0.988	122	0%	72	40.3%	9	22.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA0430	9665	genome.wustl.edu	37	16	15714314	15714314	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014647.3	-1	validated	p.E905G	1.000	126	0%	51	52.9%	11	54.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA0430	9665	genome.wustl.edu	37	16	15719457	15719457	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000344181	-1	known	e6+2	0.997	232	0%	105	45.7%	5	40%	-	-	-	-
NDE1	54820	genome.wustl.edu	37	16	15785181	15785181	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143979.1	+1	reviewed	e5+1	1.000	16	0%	10	50%	2	100%	-	-	-	-
MYH11	4629	genome.wustl.edu	37	16	15814849	15814849	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040114.1	-1	reviewed	p.T1553	0.045	49	0%	38	44.7%	6	0%	-	-	-	HMMPfam_Myosin_tail_1
MYH11	4629	genome.wustl.edu	37	16	15835377	15835377	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040114.1	-1	reviewed	p.E941D	1.000	54	0%	31	45.2%	3	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
MYH11	4629	genome.wustl.edu	37	16	15835508	15835508	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040114.1	-1	reviewed	p.L898	0.998	42	0%	31	32.3%	0	-	-	-	-	NULL
MYH11	4629	genome.wustl.edu	37	16	15854402	15854402	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040114.1	-1	reviewed	p.E422*	1.000	287	0%	199	41.7%	1	0%	-	-	-	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH11	4629	genome.wustl.edu	37	16	15872638	15872638	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040114.1	-1	reviewed	p.T270	0.723	76	0%	50	52%	2	0%	-	-	-	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
FOPNL	123811	genome.wustl.edu	37	16	15967362	15967362	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144600.2	-1	provisional	p.R145I	0.017	103	0%	43	41.9%	13	53.8%	benign(0.314)	tolerated(0.16)	neutral(0.158)	NULL
ABCC1	4363	genome.wustl.edu	37	16	16165547	16165547	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004996.3	+1	reviewed	p.L625M	1.000	69	0%	52	19.2%	13	15.3%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC6	368	genome.wustl.edu	37	16	16315587	16315587	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001171.5	-1	reviewed	p.V46	1.000	49	0%	38	42.1%	2	50%	-	-	-	NULL
SMG1	23049	genome.wustl.edu	37	16	18849402	18849402	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015092.4	-1	reviewed	p.Q2449	1.000	23	0%	17	64.7%	12	50%	-	-	-	HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like)
SMG1	23049	genome.wustl.edu	37	16	18851222	18851222	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015092.4	-1	reviewed	p.R2248H	1.000	141	0%	64	21.9%	12	41.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like)
SMG1	23049	genome.wustl.edu	37	16	18902198	18902198	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015092.4	-1	reviewed	p.V199M	1.000	354	0%	167	18%	6	0%	possibly_damaging(0.684)	deleterious(0.05)	deleterious(0.589)	superfamily_ARM repeat
SMG1	23049	genome.wustl.edu	37	16	18903639	18903639	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015092.4	-1	reviewed	p.S150	1.000	158	0%	97	44.3%	2	50%	-	-	-	superfamily_ARM repeat
TMC7	79905	genome.wustl.edu	37	16	19067985	19067985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024847.3	+1	validated	p.E665K	1.000	57	0%	37	35.1%	5	60%	possibly_damaging(0.598)	tolerated(0.14)	neutral(0.457)	NULL
SYT17	51760	genome.wustl.edu	37	16	19195144	19195144	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016524.2	+1	validated	p.R209M	0.360	19	0%	24	25%	18	44.4%	benign(0.269)	deleterious(0.05)	neutral(0.374)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
SYT17	51760	genome.wustl.edu	37	16	19236146	19236146	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016524.2	+1	validated	p.S405N	1.000	132	0%	59	33.9%	8	50%	probably_damaging(0.998)	tolerated(0.05)	deleterious(0.820)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
GDE1	51573	genome.wustl.edu	37	16	19533212	19533212	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016641.3	-1	validated	p.T25	0.963	5	0.000	7	0.571	32	40.6%	-	-	-	NULL
CCP110	9738	genome.wustl.edu	37	16	19552005	19552005	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014711.4	+1	validated	p.M649V	0.998	228	0%	76	34.2%	8	12.5%	benign(0.001)	tolerated(0.05)	neutral(0.345)	NULL
C16orf88	400506	genome.wustl.edu	37	16	19725739	19725739	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012991.2	-1	provisional	p.E207*	0.924	102	0%	88	48.9%	8	0%	-	-	-	NULL
IQCK	124152	genome.wustl.edu	37	16	19867828	19867828	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153208.1	+1	provisional	p.D274	0.004	217	0%	129	45%	26	53.8%	-	-	-	NULL
GPRC5B	51704	genome.wustl.edu	37	16	19883882	19883882	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016235.1	-1	reviewed	p.H96Y	0.995	12	0%	15	40%	29	58.6%	benign(0.141)	tolerated(1)	neutral(0.012)	HMMPfam_7tm_3
GPR139	124274	genome.wustl.edu	37	16	20043823	20043823	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002911.2	-1	validated	p.V99A	0.381	109	0%	52	36.5%	0	-	benign(0)	tolerated(0.51)	neutral(0.009)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR139	124274	genome.wustl.edu	37	16	20084873	20084873	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002911.2	-1	validated	p.A22	0.999	5	0.000	9	0.778	0	-	-	-	-	NULL
PDILT	204474	genome.wustl.edu	37	16	20371961	20371961	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174924.1	-1	provisional	p.E479*	0.963	271	0%	116	37.9%	0	-	-	-	-	superfamily_Thiordxn-like_fd
PDILT	204474	genome.wustl.edu	37	16	20380850	20380850	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174924.1	-1	provisional	p.K360	0.109	228	0%	121	43.8%	0	-	-	-	-	superfamily_Thiordxn-like_fd
PDILT	204474	genome.wustl.edu	37	16	20380971	20380971	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174924.1	-1	provisional	p.G320E	0.000	156	0%	90	37.8%	0	-	benign(0.43)	tolerated(1)	neutral(0.140)	superfamily_Thiordxn-like_fd
ACSM5	54988	genome.wustl.edu	37	16	20432611	20432611	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017888.2	+1	validated	p.T219A	0.986	42	0%	24	37.5%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSM2A	123876	genome.wustl.edu	37	16	20482950	20482950	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010845.2	+1	validated	p.A278G	0.000	280	0%	124	36.3%	0	-	benign(0)	tolerated(0.57)	neutral(0.006)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSM2B	348158	genome.wustl.edu	37	16	20556547	20556547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105069.1	-1	validated	p.G405S	0.511	133	0%	73	43.8%	0	-	possibly_damaging(0.899)	deleterious(0.02)	deleterious(0.739)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSM2B	348158	genome.wustl.edu	37	16	20566602	20566602	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105069.1	-1	validated	p.K195N	0.019	182	0%	97	37.1%	0	-	benign(0.01)	tolerated(0.36)	neutral(0.021)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSM1	116285	genome.wustl.edu	37	16	20682914	20682914	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052956.2	-1	validated	p.G231C	0.995	51	0%	33	39.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like
ACSM3	6296	genome.wustl.edu	37	16	20807698	20807698	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005622.3	+1	validated	p.K521Q	1.000	438	0%	119	39.5%	8	62.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Acetyl-CoA synthetase-like
DCUN1D3	123879	genome.wustl.edu	37	16	20871221	20871221	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173475.2	-1	validated	p.E301A	1.000	59	0%	55	12.7%	6	16.6%	possibly_damaging(0.454)	deleterious(0.05)	deleterious(0.494)	NULL
DNAH3	55567	genome.wustl.edu	37	16	20952755	20952755	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017539.1	-1	provisional	p.T3874	0.301	113	0%	54	46.3%	0	-	-	-	-	HMMPfam_Dynein_heavy
DNAH3	55567	genome.wustl.edu	37	16	21063000	21063000	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017539.1	-1	provisional	p.R1410H	1.000	17	0%	25	60%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH3	55567	genome.wustl.edu	37	16	21080840	21080840	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017539.1	-1	provisional	p.L1093	1.000	225	0%	116	25%	0	-	-	-	-	HMMPfam_DHC_N2
DNAH3	55567	genome.wustl.edu	37	16	21123343	21123343	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017539.1	-1	provisional	p.E631*	0.859	157	0%	59	47.5%	0	-	-	-	-	NULL
DNAH3	55567	genome.wustl.edu	37	16	21132082	21132082	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017539.1	-1	provisional	p.A560T	0.132	52	0%	41	12.2%	0	-	unknown(0)	-	-	NULL
DNAH3	55567	genome.wustl.edu	37	16	21136675	21136675	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017539.1	-1	provisional	p.A409T	1.000	55	0%	37	43.2%	0	-	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	NULL
DNAH3	55567	genome.wustl.edu	37	16	21147693	21147693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017539.1	-1	provisional	p.V280M	0.000	120	0%	64	39.1%	0	-	benign(0)	tolerated(0.12)	neutral(0.261)	NULL
ENSG00000217794	0	genome.wustl.edu	37	16	21558782	21558782	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000403120	-1	known	p.L72	0.714	27	0%	25	32%	0	-	-	-	-	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase
ENSG00000179038	0	genome.wustl.edu	37	16	21809069	21809069	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000314442	-1	known	e4+2	1.000	88	0%	33	57.6%	0	-	-	-	-	-
UQCRC2	7385	genome.wustl.edu	37	16	21983356	21983356	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003366.2	+1	validated	p.L293	0.719	40	0%	33	42.4%	386	43.2%	-	-	-	HMMPfam_Peptidase_M16_C,superfamily_LuxS/MPP-like metallohydrolase
VWA3A	146177	genome.wustl.edu	37	16	22128141	22128141	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173615.3	+1	validated	p.L293I	0.005	110	0%	54	48.1%	0	-	benign(0.271)	tolerated(0.44)	neutral(0.042)	NULL
VWA3A	146177	genome.wustl.edu	37	16	22134429	22134429	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173615.3	+1	validated	p.W460*	1.000	75	0%	39	33.3%	0	-	-	-	-	NULL
VWA3A	146177	genome.wustl.edu	37	16	22145716	22145716	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173615.3	+1	validated	p.S699F	0.113	81	0%	60	13.3%	0	-	benign(0.001)	tolerated(0.15)	neutral(0.241)	NULL
RRN3P3	100131998	genome.wustl.edu	37	16	22447069	22447069	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000415797	-1	known	p.I22T	1.000	103	0%	64	57.8%	1	0%	-	-	-	HMMPfam_RRN3
HS3ST2	9956	genome.wustl.edu	37	16	22926795	22926795	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006043.1	+1	reviewed	p.P339H	0.748	201	0%	132	11.4%	0	-	possibly_damaging(0.823)	deleterious(0.01)	deleterious(0.717)	HMMPfam_Sulfotransfer_1,superfamily_SSF52540
USP31	57478	genome.wustl.edu	37	16	23091401	23091401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020718.3	-1	validated	p.S681N	1.000	60	0%	46	45.7%	3	0%	benign(0.156)	tolerated(0.1)	neutral(0.300)	HMMPfam_UCH,superfamily_Cysteine proteinases
USP31	57478	genome.wustl.edu	37	16	23098488	23098488	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020718.3	-1	validated	p.R516H	1.000	50	0%	19	47.4%	3	33.3%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMPfam_UCH,superfamily_Cysteine proteinases
SCNN1G	6340	genome.wustl.edu	37	16	23200705	23200705	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039.3	+1	reviewed	p.R111C	0.677	32	0%	24	41.7%	7	28.5%	possibly_damaging(0.929)	deleterious(0)	deleterious(0.821)	HMMPfam_ASC
COG7	91949	genome.wustl.edu	37	16	23415063	23415063	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153603.3	-1	reviewed	p.S585	0.001	49	0%	27	40.7%	21	66.6%	-	-	-	HMMPfam_COG7
ENSG00000245868	0	genome.wustl.edu	37	16	23490043	23490043	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000498959	+1	novel	NULL	0.000	10	0%	10	60%	2	50%	unknown(0)	-	-	-
EARS2	124454	genome.wustl.edu	37	16	23536588	23536588	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083614.1	-1	provisional	p.R489W	0.997	162	0%	102	40.2%	19	36.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_tRNA-synt_bind
NDUFAB1	4706	genome.wustl.edu	37	16	23596714	23596714	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005003.2	-1	validated	p.L108M	1.000	175	0%	117	41.9%	190	47.3%	probably_damaging(0.999)	tolerated(0.09)	deleterious(0.787)	PatternScan_PHOSPHOPANTETHEINE,HMMPfam_PP-binding,superfamily_ACP-like
ERN2	10595	genome.wustl.edu	37	16	23707231	23707231	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033266.3	-1	validated	p.G580R	0.995	14	0%	17	35.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PRKCB	5579	genome.wustl.edu	37	16	24192159	24192159	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002738.6	+1	reviewed	p.K481	1.000	153	0%	72	38.9%	1	0%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PRKCB	5579	genome.wustl.edu	37	16	24202544	24202544	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002738.6	+1	reviewed	p.P619Q	1.000	128	0%	77	48.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00133,superfamily_Protein kinase-like (PK-like)
RBBP6	5930	genome.wustl.edu	37	16	24573339	24573339	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006910.4	+1	reviewed	p.P382	0.043	197	0%	97	42.3%	16	43.7%	-	-	-	NULL
RBBP6	5930	genome.wustl.edu	37	16	24581796	24581796	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006910.4	+1	reviewed	p.S1262I	1.000	339	0.3%	182	50.5%	30	53.3%	probably_damaging(0.996)	-	-	NULL
RBBP6	5930	genome.wustl.edu	37	16	24582255	24582255	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006910.4	+1	reviewed	p.R1290*	0.997	87	0%	41	46.3%	29	48.2%	-	-	-	NULL
ARHGAP17	55114	genome.wustl.edu	37	16	24953366	24953366	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006634.1	-1	validated	p.E478K	1.000	108	0%	69	49.3%	52	46.1%	probably_damaging(0.995)	tolerated(0.07)	deleterious(0.776)	NULL
ARHGAP17	55114	genome.wustl.edu	37	16	24955110	24955110	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006634.1	-1	validated	p.D439N	0.997	59	0%	26	42.3%	46	43.4%	benign(0.018)	deleterious(0.04)	neutral(0.349)	HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ARHGAP17	55114	genome.wustl.edu	37	16	24988630	24988630	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006634.1	-1	validated	p.R35H	1.000	12	0%	15	40%	12	33.3%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_BAR,HMMSmart_SM00721
ZKSCAN2	342357	genome.wustl.edu	37	16	25258226	25258226	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012981.4	-1	validated	p.R431C	0.933	151	0%	68	55.9%	2	50%	benign(0.265)	tolerated(0.08)	neutral(0.328)	NULL
HS3ST4	9951	genome.wustl.edu	37	16	26147534	26147534	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000331351	+1	known	p.D446Y	1.000	94	0%	37	37.8%	0	-	possibly_damaging(0.926)	deleterious(0)	deleterious(0.819)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
JMJD5	79831	genome.wustl.edu	37	16	27231783	27231783	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145348.1	+1	reviewed	p.H393Y	0.998	65	0%	53	45.3%	2	0%	benign(0.005)	deleterious(0.04)	neutral(0.349)	HMMSmart_JmjC,superfamily_SSF51197
JMJD5	79831	genome.wustl.edu	37	16	27232047	27232047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145348.1	+1	reviewed	p.S454L	1.000	82	0%	64	14.1%	2	0%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMSmart_JmjC
GTF3C1	2975	genome.wustl.edu	37	16	27509985	27509985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001520.3	-1	validated	p.R711C	0.999	55	0%	53	39.6%	24	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA0556	23247	genome.wustl.edu	37	16	27629821	27629821	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015202.2	+1	validated	p.R47W	1.000	108	0%	72	44.4%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA0556	23247	genome.wustl.edu	37	16	27761439	27761439	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015202.2	+1	validated	p.T1053M	1.000	32	0%	42	45.2%	6	50%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_Galactose-binding domain-like
KIAA0556	23247	genome.wustl.edu	37	16	27763188	27763188	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015202.2	+1	validated	p.A1165	0.329	17	0%	24	45.8%	7	42.8%	-	-	-	NULL
ENSG00000196585	0	genome.wustl.edu	37	16	28425324	28425324	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000357646	+1	known	p.V101M	0.976	109	0%	108	30.6%	1	0%	-	-	-	NULL
CLN3	1201	genome.wustl.edu	37	16	28493942	28493942	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000354630	-1	known	p.R281Q	0.013	76	0%	66	34.8%	4	50%	benign(0.001)	tolerated(0.31)	neutral(0.027)	HMMPfam_CLN3,superfamily_MFS_gen_substrate_transporter
CLN3	1201	genome.wustl.edu	37	16	28500631	28500631	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000086.2	-1	reviewed	p.T68A	0.165	94	0%	62	33.9%	67	43.2%	benign(0.02)	tolerated(1)	neutral(0.001)	HMMPfam_CLN3,superfamily_MFS general substrate transporter
APOBR	55911	genome.wustl.edu	37	16	28506979	28506979	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018690.2	+1	reviewed	p.T206M	0.000	108	0%	72	52.8%	2	0%	benign(0.191)	deleterious(0.02)	neutral(0.401)	NULL
ATXN2L	11273	genome.wustl.edu	37	16	28845676	28845676	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148414.1	+1	reviewed	p.Y729H	1.000	42	0%	47	27.7%	126	43.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ATP2A1	487	genome.wustl.edu	37	16	28895931	28895931	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173201.2	+1	reviewed	p.A167T	0.002	18	0%	17	23.5%	2	100%	benign(0)	tolerated(0.42)	neutral(0.014)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M
ATP2A1	487	genome.wustl.edu	37	16	28913586	28913586	+	Silent	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173201.2	+1	reviewed	p.G801	1.000	12	0%	20	35%	3	33.3%	-	-	-	HMMPfam_Cation_ATPase_C,superfamily_Calcium ATPase transmembrane domain M
CD19	930	genome.wustl.edu	37	16	28943908	28943908	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001770.5	+1	reviewed	p.G110	0.996	8	0.000	12	0.333	0	-	-	-	-	HMMSmart_IG,superfamily_SSF48726
SPNS1	83985	genome.wustl.edu	37	16	28992843	28992843	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142448.1	+1	validated	p.R239Q	0.820	33	0%	37	40.5%	45	53.3%	benign(0)	tolerated(0.67)	neutral(0.003)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
RRN3P2	653390	genome.wustl.edu	37	16	29107549	29107549	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000415221	+1	known	p.S295I	1.000	99	0%	41	9.8%	7	0%	benign(0.418)	deleterious(0)	deleterious(0.580)	HMMPfam_RRN3
MVP	9961	genome.wustl.edu	37	16	29851667	29851667	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005115.3	+1	reviewed	p.R360C	1.000	14	0%	17	52.9%	35	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Vault
MVP	9961	genome.wustl.edu	37	16	29853263	29853263	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005115.3	+1	reviewed	p.S488	0.001	14	0%	12	50%	57	26.3%	-	-	-	NULL
SEZ6L2	26470	genome.wustl.edu	37	16	29889645	29889645	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201575.2	-1	validated	p.V559I	1.000	36	0%	34	47.1%	36	38.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
TAOK2	9344	genome.wustl.edu	37	16	29990748	29990748	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016151.2	+1	validated	p.E192K	1.000	74	1.4%	81	48.1%	47	40.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
HIRIP3	8479	genome.wustl.edu	37	16	30004975	30004975	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003609.2	-1	reviewed	p.A465V	0.506	22	0%	30	33.3%	21	47.6%	possibly_damaging(0.721)	tolerated(0.15)	deleterious(0.502)	NULL
HIRIP3	8479	genome.wustl.edu	37	16	30006532	30006532	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003609.2	-1	reviewed	p.E65K	0.904	60	0%	74	48.6%	12	75%	benign(0.002)	tolerated(0.06)	neutral(0.323)	NULL
C16orf92	146378	genome.wustl.edu	37	16	30035061	30035061	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109660.1	+1	predicted	p.K48N	0.000	23	0%	39	46.2%	0	-	benign(0.15)	tolerated(0.16)	neutral(0.072)	NULL
TBX6	6911	genome.wustl.edu	37	16	30098117	30098117	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004608.3	-1	reviewed	p.E299*	0.726	17	0%	18	44.4%	1	100%	-	-	-	NULL
CORO1A	11151	genome.wustl.edu	37	16	30198425	30198425	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007074.2	+1	validated	p.E173*	0.751	23	0%	38	23.7%	51	0%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
TBC1D10B	26000	genome.wustl.edu	37	16	30369801	30369801	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015527.3	-1	validated	p.R631W	1.000	9	0.000	13	0.308	41	41.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TBC1D10B	26000	genome.wustl.edu	37	16	30369827	30369827	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015527.3	-1	validated	p.R622Q	1.000	13	0%	17	41.2%	40	50%	benign(0.164)	tolerated(0.13)	neutral(0.268)	NULL
ZNF48	197407	genome.wustl.edu	37	16	30409704	30409704	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152652.1	+1	provisional	p.R378H	0.966	15	0%	18	27.8%	27	37%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SEPHS2	22928	genome.wustl.edu	37	16	30456394	30456394	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418751	-1	known	p.P101S	1.000	44	0%	32	53.1%	63	47.6%	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	superfamily_PurM_N-like
ITGAL	3683	genome.wustl.edu	37	16	30486865	30486865	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002209.2	+1	reviewed	p.M97I	1.000	166	0%	106	43.4%	0	-	benign(0.283)	deleterious(0.01)	deleterious(0.493)	superfamily_Integrin alpha N-terminal domain
ITGAL	3683	genome.wustl.edu	37	16	30505636	30505636	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002209.2	+1	reviewed	p.P439	0.001	18	0.000	9	0.444	2	0%	-	-	-	HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
ZNF764	92595	genome.wustl.edu	37	16	30567240	30567240	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033410.3	-1	validated	p.V168I	0.813	5	0.000	10	0.500	4	75%	benign(0.051)	tolerated(1)	neutral(0.003)	NULL
SRCAP	10847	genome.wustl.edu	37	16	30718593	30718593	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006662.2	+1	validated	p.R132	0.991	33	0%	37	35.1%	24	45.8%	-	-	-	HMMPfam_HSA,HMMSmart_SM00573
SRCAP	10847	genome.wustl.edu	37	16	30740702	30740702	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006662.2	+1	validated	p.V1979A	1.000	35	0%	34	47.1%	38	34.2%	unknown(0)	-	-	NULL
SRCAP	10847	genome.wustl.edu	37	16	30747580	30747580	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006662.2	+1	validated	p.E2263	1.000	47	0%	28	14.3%	46	21.7%	-	-	-	NULL
FBXL19	54620	genome.wustl.edu	37	16	30953775	30953775	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000427128	+1	known	p.A427T	1.000	21	0%	18	55.6%	51	50.9%	-	-	-	superfamily_RNI-like
ORAI3	93129	genome.wustl.edu	37	16	30964650	30964650	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152288.2	+1	validated	p.A125S	1.000	26	0%	23	65.2%	46	43.4%	possibly_damaging(0.945)	tolerated(0.06)	deleterious(0.712)	HMMPfam_DUF1650
ORAI3	93129	genome.wustl.edu	37	16	30964667	30964667	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152288.2	+1	validated	p.H130	1.000	21	0%	28	32.1%	48	43.7%	-	-	-	HMMPfam_DUF1650
SETD1A	9739	genome.wustl.edu	37	16	30976167	30976167	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014712.1	+1	provisional	p.A368	0.950	78	0%	64	35.9%	14	28.5%	-	-	-	NULL
SETD1A	9739	genome.wustl.edu	37	16	30977237	30977237	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014712.1	+1	provisional	p.S679P	1.000	20	0%	13	46.2%	6	33.3%	possibly_damaging(0.903)	-	-	NULL
HSD3B7	80270	genome.wustl.edu	37	16	30998198	30998198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025193.3	+1	reviewed	p.R190H	1.000	7	0.000	18	0.278	26	26.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_3Beta_HSD,superfamily_NAD(P)-bd
STX4	6810	genome.wustl.edu	37	16	31045574	31045574	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004604.3	+1	provisional	p.K54E	0.709	49	0%	56	32.1%	44	38.6%	possibly_damaging(0.797)	tolerated(0.08)	deleterious(0.599)	HMMPfam_Syntaxin,HMMSmart_SynN,superfamily_t-snare
ZNF646	9726	genome.wustl.edu	37	16	31088823	31088823	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014699.3	+1	validated	p.R393Q	0.993	10	0%	12	66.7%	7	100%	probably_damaging(0.992)	tolerated(0.25)	deleterious(0.484)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF646	9726	genome.wustl.edu	37	16	31089102	31089102	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014699.3	+1	validated	p.S486N	1.000	19	0%	26	42.3%	8	62.5%	probably_damaging(0.989)	tolerated(0.06)	deleterious(0.762)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF646	9726	genome.wustl.edu	37	16	31091074	31091074	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014699.3	+1	validated	p.G1143	0.000	31	0%	20	60%	1	0%	-	-	-	NULL
ZNF646	9726	genome.wustl.edu	37	16	31092203	31092203	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014699.3	+1	validated	p.D1520Y	0.012	20	0%	37	54.1%	15	66.6%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
FUS	2521	genome.wustl.edu	37	16	31201716	31201716	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004960.3	+1	reviewed	p.N430T	1.000	124	0%	101	44.6%	490	46.1%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,superfamily_Znf265 first zinc-finger domain
ITGAM	3684	genome.wustl.edu	37	16	31273104	31273104	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000632.3	+1	reviewed	p.Q40	0.978	67	0%	40	52.5%	0	-	-	-	-	HMMSmart_Int_alpha,superfamily_SSF69318
ITGAM	3684	genome.wustl.edu	37	16	31282320	31282320	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000632.3	+1	reviewed	p.S158Y	1.000	145	0%	82	40.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300,superfamily_SSF69318
ITGAM	3684	genome.wustl.edu	37	16	31336030	31336030	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000632.3	+1	reviewed	p.G739E	0.997	37	0%	35	34.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Integrin_alpha2,superfamily_SSF69179
ITGAM	3684	genome.wustl.edu	37	16	31340591	31340591	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000632.3	+1	reviewed	p.E945D	0.993	136	0%	92	37%	4	0%	possibly_damaging(0.538)	tolerated(0.68)	neutral(0.184)	HMMPfam_Integrin_alpha2
ITGAX	3687	genome.wustl.edu	37	16	31368363	31368363	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000887.3	+1	reviewed	p.A87T	1.000	14	0%	17	47.1%	0	-	probably_damaging(0.996)	tolerated(0.34)	deleterious(0.485)	superfamily_SSF69318
ITGAD	3681	genome.wustl.edu	37	16	31426282	31426282	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005353.2	+1	validated	p.A751	0.001	49	0%	25	32%	0	-	-	-	-	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
TGFB1I1	7041	genome.wustl.edu	37	16	31485039	31485039	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042454.2	+1	reviewed	p.K56fs	1.000	-	-	-	-	-	-	-	-	-	NULL
C16orf58	64755	genome.wustl.edu	37	16	31502228	31502228	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022744.2	-1	validated	p.T445	0.014	38	0%	20	55%	53	16.9%	-	-	-	HMMPfam_DUF647
C16orf58	64755	genome.wustl.edu	37	16	31510621	31510621	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022744.2	-1	validated	e5+2	1.000	51	0%	42	42.9%	14	100%	-	-	-	-
IGHV3OR16-8	388255	genome.wustl.edu	37	16	33647503	33647503	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000438532	-1	known	p.P33S	1.000	128	0%	94	38.3%	0	-	possibly_damaging(0.898)	deleterious(0.02)	deleterious(0.738)	HMMPfam_V-set,superfamily_Immunoglobulin
ENSG00000226511	0	genome.wustl.edu	37	16	33741077	33741077	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000450856	-1	known	p.A31V	0.012	135	0%	95	26.3%	0	-	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_V-set,superfamily_Immunoglobulin
LOC100287647	100287647	genome.wustl.edu	37	16	33941905	33941905	+	Missense_Mutation	SNP	C	C	T	rs458474		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343473.1	+1	model	p.A116V	0.998	721	0%	389	11.3%	0	-	-	-	-	NULL
ENSG00000200434	0	genome.wustl.edu	37	16	33965444	33965444	+	RNA	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000363564	+1	novel	NULL	1.000	47	0%	27	14.8%	0	-	-	-	-	-
VPS35	55737	genome.wustl.edu	37	16	46712983	46712983	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018206.4	-1	reviewed	p.Q198*	1.000	549	0%	228	46.5%	45	4.4%	-	-	-	HMMPfam_Vps35
NETO2	81831	genome.wustl.edu	37	16	47162416	47162416	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018092.3	-1	reviewed	p.R101W	1.000	211	0%	88	46.6%	20	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
ABCC11	85320	genome.wustl.edu	37	16	48249202	48249202	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032583.3	-1	reviewed	p.S335	0.248	178	0.6%	102	41.2%	0	-	-	-	-	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
SIAH1	6477	genome.wustl.edu	37	16	48395905	48395905	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006610.1	-1	reviewed	p.M176I	1.000	134	0%	86	38.4%	47	38.2%	benign(0.003)	deleterious(0)	neutral(0.445)	superfamily_Traf_like,HMMPfam_Sina
N4BP1	9683	genome.wustl.edu	37	16	48577000	48577000	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153029.3	-1	validated	p.L836I	0.690	79	0%	68	38.2%	31	54.8%	possibly_damaging(0.737)	tolerated(0.12)	deleterious(0.530)	NULL
CBLN1	869	genome.wustl.edu	37	16	49314895	49314895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004352.3	-1	validated	p.R108H	1.000	188	0%	165	40.6%	2	100%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like
HEATR3	55027	genome.wustl.edu	37	16	50104111	50104111	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182922.2	+1	provisional	p.N141T	0.925	234	0%	121	37.2%	12	25%	possibly_damaging(0.923)	tolerated(0.44)	neutral(0.385)	superfamily_ARM repeat
ADCY7	113	genome.wustl.edu	37	16	50324514	50324514	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114.3	+1	reviewed	p.A106	0.104	36	0%	23	47.8%	19	52.6%	-	-	-	NULL
ADCY7	113	genome.wustl.edu	37	16	50326717	50326717	+	Missense_Mutation	SNP	G	G	A	rs141712991	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114.3	+1	reviewed	p.R223H	1.000	12	0%	15	53.3%	18	38.8%	possibly_damaging(0.938)	deleterious(0.01)	deleterious(0.789)	NULL
BRD7	29117	genome.wustl.edu	37	16	50367604	50367604	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013263.3	-1	validated	p.D298H	1.000	151	0%	89	43.8%	36	50%	possibly_damaging(0.948)	tolerated(0.11)	deleterious(0.663)	NULL
SNX20	124460	genome.wustl.edu	37	16	50702975	50702975	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153337.2	-1	validated	p.P123S	0.144	86	0%	79	34.2%	0	-	unknown(0)	-	-	NULL
NOD2	64127	genome.wustl.edu	37	16	50733842	50733842	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022162.1	+1	reviewed	p.P173S	1.000	20	0%	24	20.8%	2	50%	probably_damaging(1)	tolerated(0.2)	deleterious(0.549)	HMMPfam_CARD,superfamily_DEATH domain
NOD2	64127	genome.wustl.edu	37	16	50744526	50744526	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022162.1	+1	reviewed	p.R235H	1.000	31	0%	27	55.6%	0	-	benign(0.355)	tolerated(0.16)	neutral(0.172)	NULL
CYLD	1540	genome.wustl.edu	37	16	50785641	50785641	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015247.2	+1	reviewed	p.A211T	0.361	159	0%	94	11.7%	5	0%	benign(0)	tolerated(0.1)	neutral(0.286)	superfamily_Cap-Gly domain
TOX3	27324	genome.wustl.edu	37	16	52502440	52502440	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080430.2	-1	reviewed	p.A45V	0.999	217	0%	102	11.8%	12	8.3%	possibly_damaging(0.86)	tolerated(0.08)	deleterious(0.633)	NULL
CHD9	80205	genome.wustl.edu	37	16	53190477	53190477	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025134.4	+1	validated	p.H159R	1.000	111	0%	68	47.1%	6	83.3%	possibly_damaging(0.918)	tolerated(0.75)	neutral(0.370)	NULL
CHD9	80205	genome.wustl.edu	37	16	53190576	53190576	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025134.4	+1	validated	p.S192Y	1.000	186	0%	101	52.5%	1	0%	possibly_damaging(0.902)	deleterious(0)	deleterious(0.801)	NULL
CHD9	80205	genome.wustl.edu	37	16	53307540	53307540	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025134.4	+1	validated	p.L1574I	0.900	97	0%	40	10%	3	33.3%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	superfamily_SSF52540
CHD9	80205	genome.wustl.edu	37	16	53330904	53330904	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025134.4	+1	validated	p.V1849	1.000	204	0%	102	20.6%	7	28.5%	-	-	-	superfamily_SSF52540
RBL2	5934	genome.wustl.edu	37	16	53476577	53476577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005611.3	+1	validated	p.E127K	1.000	138	0%	65	43.1%	4	75%	benign(0.406)	deleterious(0.03)	deleterious(0.495)	HMMSmart_CYCLIN
RBL2	5934	genome.wustl.edu	37	16	53480955	53480955	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005611.3	+1	validated	p.R192*	1.000	314	0.3%	171	50.3%	9	22.2%	-	-	-	NULL
RBL2	5934	genome.wustl.edu	37	16	53513805	53513805	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005611.3	+1	validated	p.R928K	1.000	278	0%	91	40.7%	20	15%	possibly_damaging(0.887)	deleterious(0.03)	deleterious(0.712)	HMMPfam_RB_B,HMMSmart_CYCLIN,superfamily_Cyclin_like
IRX3	79191	genome.wustl.edu	37	16	54317617	54317617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024336.2	-1	validated	p.S496L	0.993	63	0%	60	41.7%	7	14.2%	unknown(0)	deleterious(0)	-	NULL
IRX3	79191	genome.wustl.edu	37	16	54319273	54319273	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024336.2	-1	validated	p.V174M	1.000	60	0%	86	53.5%	28	39.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1
IRX5	10265	genome.wustl.edu	37	16	54966805	54966805	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005853.5	+1	validated	p.G215	0.963	18	0%	23	52.2%	21	52.3%	-	-	-	NULL
CES5A	221223	genome.wustl.edu	37	16	55883566	55883566	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143685.1	-1	validated	p.A465T	0.931	32	0%	15	26.7%	0	-	benign(0.344)	tolerated(0.12)	neutral(0.369)	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases
OGFOD1	55239	genome.wustl.edu	37	16	56504657	56504657	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018233.3	+1	validated	p.S413	0.000	133	0%	78	47.4%	36	52.7%	-	-	-	HMMPfam_Ofd1_CTDD
BBS2	583	genome.wustl.edu	37	16	56519641	56519641	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031885.3	-1	reviewed	p.M640I	1.000	204	0%	79	39.2%	16	50%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
NUP93	9688	genome.wustl.edu	37	16	56864471	56864471	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014669.3	+1	validated	p.A320V	1.000	43	0%	50	38%	42	64.2%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	HMMPfam_Nic96
SLC12A3	6559	genome.wustl.edu	37	16	56901108	56901108	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000339.2	+1	reviewed	p.G137S	1.000	23	0%	24	16.7%	0	-	possibly_damaging(0.951)	deleterious(0)	deleterious(0.839)	NULL
SLC12A3	6559	genome.wustl.edu	37	16	56906603	56906603	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000339.2	+1	reviewed	p.R334W	0.999	35	0%	41	19.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_AA_permease
CETP	1071	genome.wustl.edu	37	16	57009051	57009051	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000078.2	+1	reviewed	p.E323D	0.016	95	0%	81	54.3%	0	-	benign(0)	tolerated(0.34)	neutral(0.023)	HMMPfam_LBP_BPI_CETP_C,HMMSmart_SM00329,superfamily_Bactericidal permeability-increasing protein BPI
NLRC5	84166	genome.wustl.edu	37	16	57054763	57054763	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032206.3	+1	validated	p.T47S	0.000	41	0%	27	37%	1	0%	benign(0.013)	tolerated(0.26)	neutral(0.035)	NULL
NLRC5	84166	genome.wustl.edu	37	16	57075908	57075908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032206.3	+1	validated	p.A1015V	0.025	29	0%	16	37.5%	6	16.6%	possibly_damaging(0.513)	deleterious(0.02)	deleterious(0.555)	HMMSmart_SM00368,superfamily_RNI-like
NLRC5	84166	genome.wustl.edu	37	16	57103772	57103772	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000436936	+1	known	p.R1530*	0.004	18	0%	13	61.5%	3	0%	-	-	-	NULL
CPNE2	221184	genome.wustl.edu	37	16	57144820	57144820	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152727.4	+1	reviewed	p.G56S	0.999	65	0%	47	17%	55	12.7%	benign(0.015)	tolerated(0.11)	neutral(0.272)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
CPNE2	221184	genome.wustl.edu	37	16	57147257	57147257	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152727.4	+1	reviewed	p.V80M	0.243	41	0%	47	12.8%	69	4.3%	benign(0.017)	tolerated(0.1)	neutral(0.287)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
CX3CL1	6376	genome.wustl.edu	37	16	57416606	57416606	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002996.3	+1	provisional	p.V286I	0.000	5	0.000	11	0.455	10	30%	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
POLR2C	5432	genome.wustl.edu	37	16	57500137	57500137	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032940.2	+1	reviewed	p.R86W	0.997	529	0%	371	43.9%	53	62.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_RBP11-like subunits of RNA polymerase,HMMPfam_RNA_pol_L,HMMPfam_RNA_pol_A_bac,superfamily_Insert subdomain of RNA polymerase alpha subunit,HMMSmart_SM00662
DOK4	55715	genome.wustl.edu	37	16	57509835	57509835	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018110.3	-1	validated	p.S34F	1.000	20	0%	29	27.6%	15	60%	possibly_damaging(0.628)	deleterious(0.01)	deleterious(0.625)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
GPR114	221188	genome.wustl.edu	37	16	57601980	57601980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153837.1	+1	provisional	p.R345H	0.001	43	0%	33	30.3%	1	0%	benign(0.364)	tolerated(0.13)	neutral(0.368)	HMMPfam_7tm_2
GPR56	9289	genome.wustl.edu	37	16	57693377	57693377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145771.1	+1	reviewed	p.V453I	0.992	11	0.000	9	0.667	62	45.1%	benign(0.312)	tolerated(0.36)	neutral(0.118)	HMMPfam_7tm_2
GPR97	222487	genome.wustl.edu	37	16	57719669	57719669	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170776.4	+1	validated	p.I457	0.999	88	0%	92	41.3%	0	-	-	-	-	HMMPfam_7tm_2
CCDC135	84229	genome.wustl.edu	37	16	57738937	57738937	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032269.5	+1	validated	p.E283D	0.000	67	0%	59	30.5%	0	-	benign(0)	tolerated(0.46)	neutral(0.012)	NULL
KIFC3	3801	genome.wustl.edu	37	16	57794675	57794675	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005550.3	-1	validated	p.S732L	1.000	10	0%	11	45.5%	33	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIFC3	3801	genome.wustl.edu	37	16	57799532	57799532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005550.3	-1	validated	p.R451C	1.000	30	0%	25	60%	28	46.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
CNGB1	1258	genome.wustl.edu	37	16	57946870	57946870	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001297.4	-1	reviewed	p.R778H	1.000	83	0%	59	55.9%	0	-	benign(0.295)	tolerated(0.16)	neutral(0.151)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
C16orf57	79650	genome.wustl.edu	37	16	58054085	58054085	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024598.2	+1	validated	p.R245H	0.987	58	0%	65	56.9%	73	34.2%	probably_damaging(0.999)	tolerated(0.12)	deleterious(0.751)	HMMPfam_HVSL
CSNK2A2	1459	genome.wustl.edu	37	16	58201138	58201138	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001896.2	-1	validated	p.F233L	1.000	177	0%	93	47.3%	66	40.9%	possibly_damaging(0.922)	tolerated(0.09)	deleterious(0.668)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
GINS3	64785	genome.wustl.edu	37	16	58438569	58438569	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001126129.1	+1	reviewed	p.Q235R	1.000	110	0%	61	45.9%	12	58.3%	possibly_damaging(0.643)	tolerated(0.21)	neutral(0.270)	NULL
NDRG4	65009	genome.wustl.edu	37	16	58540317	58540317	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130487.1	+1	reviewed	p.G185	0.996	27	0%	26	34.6%	5	20%	-	-	-	HMMPfam_Ndr,superfamily_SSF53474
NDRG4	65009	genome.wustl.edu	37	16	58543254	58543254	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130487.1	+1	reviewed	p.Y340C	1.000	26	0%	32	46.9%	17	41.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ndr
CNOT1	23019	genome.wustl.edu	37	16	58557403	58557403	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016284.3	-1	validated	p.R2263H	1.000	243	0%	117	47%	178	43.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Not1
CNOT1	23019	genome.wustl.edu	37	16	58585702	58585702	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016284.3	-1	validated	p.S998P	1.000	119	0%	53	41.5%	40	52.5%	probably_damaging(0.986)	deleterious(0.02)	deleterious(0.818)	NULL
CDH8	1006	genome.wustl.edu	37	16	61687916	61687916	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001796.2	-1	reviewed	p.R666C	1.000	47	0%	53	43.4%	0	-	probably_damaging(0.999)	tolerated(0.11)	deleterious(0.762)	HMMPfam_Cadherin_C
CDH8	1006	genome.wustl.edu	37	16	61823268	61823268	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001796.2	-1	reviewed	p.I466L	0.996	329	0%	128	22.7%	0	-	benign(0.013)	deleterious(0.03)	neutral(0.365)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDH11	1009	genome.wustl.edu	37	16	64981697	64981697	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001797.2	-1	reviewed	p.A734T	1.000	97	0%	43	44.2%	20	65%	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	HMMPfam_Cadherin_C
CDH11	1009	genome.wustl.edu	37	16	64984859	64984859	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001797.2	-1	reviewed	p.L569I	1.000	14	0%	12	66.7%	27	48.1%	possibly_damaging(0.853)	tolerated(0.1)	deleterious(0.615)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
ENSG00000250685	0	genome.wustl.edu	37	16	65390367	65390367	+	RNA	SNP	T	T	A	rs144761927	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000505989	-1	known	NULL	0.005	213	0%	111	45.9%	0	-	-	-	-	-
DYNC1LI2	1783	genome.wustl.edu	37	16	66759788	66759788	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006141.2	-1	validated	p.T441A	1.000	85	0%	68	20.6%	28	17.8%	benign(0.378)	tolerated(0.06)	neutral(0.443)	HMMPfam_DLIC
CCDC79	283847	genome.wustl.edu	37	16	66812899	66812899	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136505.1	-1	provisional	p.F240	0.941	99	1%	56	42.9%	0	-	-	-	-	superfamily_ARM repeat
NAE1	8883	genome.wustl.edu	37	16	66839818	66839818	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003905.3	-1	reviewed	p.E481G	1.000	195	0%	99	13.1%	91	7.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Activating enzymes of the ubiquitin-like proteins
CA7	766	genome.wustl.edu	37	16	66880978	66880978	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005182.2	+1	reviewed	p.R29H	1.000	49	0%	41	22%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
CES2	8824	genome.wustl.edu	37	16	66969574	66969574	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003869.4	+1	reviewed	p.A76	0.000	10	0%	13	30.8%	19	57.8%	-	-	-	HMMPfam_COesterase
CES3	23491	genome.wustl.edu	37	16	66997089	66997089	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024922.4	+1	validated	p.E30D	0.000	11	0%	17	35.3%	8	25%	benign(0.323)	tolerated(0.62)	neutral(0.105)	HMMPfam_COesterase
CES3	23491	genome.wustl.edu	37	16	67000646	67000646	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024922.4	+1	validated	p.L314I	0.001	95	0%	72	12.5%	12	50%	benign(0.072)	tolerated(0.39)	neutral(0.021)	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases
C16orf70	80262	genome.wustl.edu	37	16	67165200	67165200	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025187.3	+1	provisional	p.V81	0.974	332	0%	128	49.2%	5	60%	-	-	-	HMMPfam_UPF0183
FBXL8	55336	genome.wustl.edu	37	16	67196917	67196917	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018378.2	+1	reviewed	p.R107C	0.969	4	0.000	12	0.667	5	60%	benign(0.003)	tolerated(0.09)	neutral(0.296)	superfamily_SSF52047
E2F4	1874	genome.wustl.edu	37	16	67226934	67226934	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001950.3	+1	reviewed	p.T90A	1.000	21	0%	12	33.3%	65	50.7%	possibly_damaging(0.804)	tolerated(0.13)	deleterious(0.555)	NULL
FHOD1	29109	genome.wustl.edu	37	16	67263546	67263546	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013241.2	-1	reviewed	p.E1163G	1.000	55	0%	46	52.2%	29	27.5%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
FHOD1	29109	genome.wustl.edu	37	16	67265194	67265194	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013241.2	-1	reviewed	p.R855H	1.000	32	0%	23	39.1%	13	61.5%	benign(0.134)	tolerated(1)	neutral(0.011)	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd
SLC9A5	6553	genome.wustl.edu	37	16	67298274	67298274	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004594.2	+1	validated	p.R621H	1.000	25	0%	16	43.8%	3	66.6%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
LRRC36	55282	genome.wustl.edu	37	16	67405132	67405132	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018296.5	+1	validated	p.A494D	0.912	103	0%	42	40.5%	0	-	-	-	-	NULL
ATP6V0D1	9114	genome.wustl.edu	37	16	67478481	67478481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004691.4	-1	reviewed	p.A144D	1.000	27	0%	20	40%	121	48.7%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_vATP-synt_AC39,superfamily_V-type ATP synthase subunit C
FAM65A	79567	genome.wustl.edu	37	16	67579662	67579662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024519.2	+1	validated	p.R1096W	0.998	24	0%	35	45.7%	89	46%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_ARM-type_fold
RANBP10	57610	genome.wustl.edu	37	16	67778252	67778252	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020850.1	-1	provisional	p.I169	0.981	40	0%	44	52.3%	8	37.5%	-	-	-	HMMPfam_SPRY,HMMSmart_SPRY
TSNAXIP1	55815	genome.wustl.edu	37	16	67855087	67855087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000415766	+1	known	p.A78V	0.997	22	0%	16	25%	2	100%	benign(0.045)	-	-	NULL
TSNAXIP1	55815	genome.wustl.edu	37	16	67859918	67859918	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018430.2	+1	validated	p.F307L	0.000	23	0%	19	36.8%	4	50%	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
EDC4	23644	genome.wustl.edu	37	16	67913644	67913644	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014329.3	+1	validated	p.D596	0.987	25	0%	23	47.8%	46	30.4%	-	-	-	NULL
EDC4	23644	genome.wustl.edu	37	16	67914116	67914116	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014329.3	+1	validated	p.G698	0.062	15	0%	12	66.7%	27	18.5%	-	-	-	NULL
EDC4	23644	genome.wustl.edu	37	16	67916231	67916231	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014329.3	+1	validated	e24+1	1.000	96	0%	89	50.6%	18	100%	-	-	-	-
PSKH1	5681	genome.wustl.edu	37	16	67943302	67943302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006742.2	+1	validated	p.R217Q	1.000	33	0%	28	35.7%	43	37.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_Pkinase
LCAT	3931	genome.wustl.edu	37	16	67974291	67974291	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000229.1	-1	reviewed	p.R280H	0.000	55	0%	48	52.1%	28	46.4%	benign(0)	tolerated(0.12)	neutral(0.261)	HMMPfam_LACT,superfamily_alpha/beta-Hydrolases
SLC12A4	6560	genome.wustl.edu	37	16	67985923	67985923	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005072.4	-1	validated	p.N312S	1.000	16	0%	28	64.3%	13	23%	possibly_damaging(0.948)	deleterious(0.02)	deleterious(0.774)	HMMPfam_AA_permease
DPEP3	64180	genome.wustl.edu	37	16	68012206	68012206	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022357.3	-1	reviewed	p.R242H	1.000	34	0%	27	44.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_RENAL_DIPEPTIDASE_1,HMMPfam_Peptidase_M19,superfamily_Metallo-dependent hydrolases
NFATC3	4775	genome.wustl.edu	37	16	68156610	68156610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173165.1	+1	reviewed	p.R275M	1.000	64	0%	49	44.9%	14	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NFATC3	4775	genome.wustl.edu	37	16	68225305	68225305	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173165.1	+1	reviewed	p.Q911H	0.007	102	0%	78	34.6%	30	36.6%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
SLC7A6	9057	genome.wustl.edu	37	16	68309060	68309060	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076785.1	+1	validated	p.A144V	1.000	70	0%	62	51.6%	9	55.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_AA_permease
PRMT7	54496	genome.wustl.edu	37	16	68363010	68363010	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019023.2	+1	validated	p.E108D	1.000	307	0%	159	45.9%	20	45%	possibly_damaging(0.719)	tolerated(0.4)	neutral(0.277)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
CDH3	1001	genome.wustl.edu	37	16	68716211	68716211	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001793.4	+1	reviewed	p.A335T	0.037	11	0%	17	70.6%	78	51.2%	benign(0.055)	tolerated(0.23)	neutral(0.045)	HMMPfam_Cadherin,superfamily_Cadherin-like
CDH3	1001	genome.wustl.edu	37	16	68716319	68716319	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001793.4	+1	reviewed	p.G371S	1.000	16	0%	26	19.2%	87	14.9%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
CDH3	1001	genome.wustl.edu	37	16	68732063	68732063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000429102	+1	known	p.R783H	0.000	7	0.000	14	0.500	5	20%	unknown(0)	-	-	NULL
CDH1	999	genome.wustl.edu	37	16	68857439	68857439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004360.3	+1	reviewed	p.A692T	0.004	69	0%	56	12.5%	113	6.1%	benign(0.114)	tolerated(0.19)	neutral(0.059)	superfamily_Cadherin-like
CDH1	999	genome.wustl.edu	37	16	68862192	68862192	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004360.3	+1	reviewed	p.G760	0.865	140	0%	88	34.1%	139	56.8%	-	-	-	HMMPfam_Cadherin_C
TMCO7	79613	genome.wustl.edu	37	16	68901117	68901117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024562.1	+1	validated	p.A330S	1.000	142	0%	76	19.7%	8	12.5%	possibly_damaging(0.903)	tolerated(0.86)	neutral(0.358)	NULL
TMCO7	79613	genome.wustl.edu	37	16	68961814	68961814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024562.1	+1	validated	p.S824I	0.001	97	0%	58	31%	4	25%	benign(0.014)	tolerated(0.29)	neutral(0.030)	superfamily_ARM repeat,HMMPfam_DUF2435
HAS3	3038	genome.wustl.edu	37	16	69143354	69143354	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005329.2	+1	reviewed	p.L19P	1.000	13	0%	16	62.5%	1	100%	benign(0.344)	deleterious(0)	deleterious(0.553)	NULL
HAS3	3038	genome.wustl.edu	37	16	69143446	69143446	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005329.2	+1	reviewed	p.A50T	1.000	16	0%	14	50%	10	60%	benign(0.193)	deleterious(0.02)	neutral(0.401)	NULL
CIRH1A	84916	genome.wustl.edu	37	16	69184774	69184774	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032830.2	+1	reviewed	p.Y323	0.253	96	0%	50	38%	51	60.7%	-	-	-	superfamily_WD40 repeat-like
NIP7	51388	genome.wustl.edu	37	16	69375221	69375221	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016101.3	+1	validated	p.L141V	0.787	120	0%	66	36.4%	21	57.1%	probably_damaging(0.978)	deleterious(0.01)	deleterious(0.826)	HMMSmart_SM00359,superfamily_PUA domain-like
NQO1	1728	genome.wustl.edu	37	16	69744945	69744945	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000903.2	-1	reviewed	p.G253	1.000	375	0%	188	41%	51	43.1%	-	-	-	superfamily_Flavoproteins
NQO1	1728	genome.wustl.edu	37	16	69752319	69752319	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000903.2	-1	reviewed	p.L42	0.967	72	0%	40	45%	76	40.7%	-	-	-	HMMPfam_Flavodoxin_2,superfamily_Flavoproteins
PDXDC2P	283970	genome.wustl.edu	37	16	70011824	70011824	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_003610.1	-1	provisional	NULL	0.001	72	0%	44	18.2%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	-
PDXDC2P	283970	genome.wustl.edu	37	16	70057361	70057361	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000325845	-1	known	p.S294N	1.000	137	0%	91	35.2%	45	2.2%	-	-	-	superfamily_PLP-dependent transferases
PDPR	55066	genome.wustl.edu	37	16	70166118	70166118	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017990.3	+1	validated	p.G304	0.995	125	0%	94	16%	4	0%	-	-	-	HMMPfam_DAO,superfamily_SSF51905,superfamily_SSF54373
AARS	16	genome.wustl.edu	37	16	70289731	70289731	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001605.2	-1	reviewed	p.R729Q	1.000	51	0%	39	23.1%	191	51.3%	benign(0)	tolerated(0.91)	-	HMMPfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit
DDX19A	55308	genome.wustl.edu	37	16	70400676	70400676	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018332.3	+1	provisional	p.V311G	1.000	99	0%	70	41.4%	33	42.4%	possibly_damaging(0.914)	deleterious(0)	deleterious(0.810)	superfamily_P-loop containing nucleoside triphosphate hydrolases
FUK	197258	genome.wustl.edu	37	16	70500904	70500904	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000428974	+1	known	p.Q160	0.000	21	0%	23	47.8%	1	0%	-	-	-	NULL
FUK	197258	genome.wustl.edu	37	16	70508202	70508202	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145059.2	+1	reviewed	p.V650M	0.998	12	0%	21	19%	16	18.7%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
COG4	25839	genome.wustl.edu	37	16	70516712	70516712	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015386.2	-1	validated	p.E614K	1.000	69	0%	63	47.6%	53	49%	benign(0.062)	tolerated(0.23)	neutral(0.045)	NULL
SF3B3	23450	genome.wustl.edu	37	16	70562880	70562880	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012426.4	+1	reviewed	p.F59V	1.000	159	0%	87	34.5%	56	55.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
HYDIN	54768	genome.wustl.edu	37	16	70954612	70954612	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032821.2	-1	validated	p.H2555R	0.941	55	0%	46	17.4%	0	-	benign(0.016)	tolerated(0.07)	neutral(0.320)	NULL
HYDIN	54768	genome.wustl.edu	37	16	71065710	71065710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032821.2	-1	validated	p.K880N	0.999	174	0%	89	34.8%	0	-	benign(0.218)	deleterious(0.03)	neutral(0.386)	NULL
HYDIN	54768	genome.wustl.edu	37	16	71127835	71127835	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032821.2	-1	validated	p.R444Q	1.000	119	0%	68	45.6%	3	0%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
FTSJD1	55783	genome.wustl.edu	37	16	71319160	71319160	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099642.1	-1	validated	p.F222V	0.993	129	0%	84	11.9%	7	14.2%	probably_damaging(0.977)	tolerated(0.53)	neutral(0.426)	HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
ZNF19	7567	genome.wustl.edu	37	16	71510014	71510014	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006961.3	-1	reviewed	p.N146H	0.010	330	0%	181	43.6%	1	0%	benign(0.282)	tolerated(0.15)	neutral(0.328)	NULL
TAT	6898	genome.wustl.edu	37	16	71609889	71609889	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000353.2	-1	reviewed	p.E92D	1.000	145	0%	92	43.5%	0	-	benign(0.002)	tolerated(0.55)	neutral(0.007)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
PHLPP2	23035	genome.wustl.edu	37	16	71683199	71683199	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015020.2	-1	validated	p.S1189Y	0.035	41	0%	37	48.6%	4	25%	possibly_damaging(0.502)	tolerated(0.06)	deleterious(0.490)	NULL
ZNF821	55565	genome.wustl.edu	37	16	71894169	71894169	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017530.1	-1	provisional	p.R289W	1.000	9	0.000	9	0.444	15	73.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LOC100130263	100130263	genome.wustl.edu	37	16	72038292	72038292	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001719547.1	-1	model	p.N86	1.000	117	0%	77	40.3%	0	-	-	-	-	HMMPfam_DUF814
DHODH	1723	genome.wustl.edu	37	16	72048450	72048450	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001361.3	+1	reviewed	p.D105Y	1.000	165	0%	118	43.2%	7	42.8%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_DHO_dh,superfamily_SSF51395
DHODH	1723	genome.wustl.edu	37	16	72055123	72055123	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001361.3	+1	reviewed	p.D206	1.000	10	0%	16	43.8%	9	33.3%	-	-	-	HMMPfam_DHO_dh,superfamily_SSF51395
DHODH	1723	genome.wustl.edu	37	16	72058060	72058060	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001361.3	+1	reviewed	p.G384R	0.019	153	0%	123	38.2%	13	46.1%	benign(0)	tolerated(0.11)	neutral(0.272)	superfamily_SSF51395
HPR	3250	genome.wustl.edu	37	16	72110692	72110692	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020995.3	+1	validated	p.T253	0.002	40	0%	37	54.1%	0	-	-	-	-	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
HPR	3250	genome.wustl.edu	37	16	72110870	72110870	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020995.3	+1	validated	p.A313T	0.988	143	0%	80	52.5%	0	-	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
PMFBP1	83449	genome.wustl.edu	37	16	72158827	72158827	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031293.2	-1	validated	p.A810T	0.038	33	0%	30	46.7%	1	0%	possibly_damaging(0.646)	tolerated(0.56)	neutral(0.233)	NULL
PMFBP1	83449	genome.wustl.edu	37	16	72174340	72174340	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031293.2	-1	validated	p.R260*	0.999	237	0%	114	47.4%	0	-	-	-	-	NULL
ZFHX3	463	genome.wustl.edu	37	16	72822728	72822728	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006885.3	-1	reviewed	p.P3149	1.000	14	0%	27	40.7%	27	66.6%	-	-	-	NULL
ZFHX3	463	genome.wustl.edu	37	16	72829144	72829144	+	Silent	SNP	C	C	T	rs182754861	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006885.3	-1	reviewed	p.S2479	0.000	70	0%	78	42.3%	16	43.7%	-	-	-	NULL
ZFHX3	463	genome.wustl.edu	37	16	72829797	72829797	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006885.3	-1	reviewed	p.D2262N	1.000	157	0%	104	56.7%	8	62.5%	unknown(0)	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
NPIPL2	440348	genome.wustl.edu	37	16	74419270	74419270	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344099.1	+1	model	p.R94*	0.003	760	0%	439	29.4%	1	0%	-	-	-	HMMPfam_NPIP
NPIPL2	440348	genome.wustl.edu	37	16	74423967	74423967	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344099.1	+1	model	p.L210	0.003	322	0%	169	37.3%	0	-	-	-	-	HMMPfam_NPIP
CLEC18B	497190	genome.wustl.edu	37	16	74444503	74444503	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001011880.2	-1	validated	p.S381F	0.950	84	0%	116	30.2%	2	0%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
GLG1	2734	genome.wustl.edu	37	16	74487011	74487011	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_027264.1	-1	validated	NULL	1.000	88	0%	77	49.4%	203	44.3%	-	-	-	-
ADAT1	23536	genome.wustl.edu	37	16	75634206	75634206	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012091.2	-1	reviewed	p.A473T	0.513	94	0%	48	39.6%	10	50%	probably_damaging(0.978)	deleterious(0.01)	deleterious(0.826)	HMMPfam_A_deamin,HMMSmart_SM00552
ADAT1	23536	genome.wustl.edu	37	16	75642165	75642165	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012091.2	-1	reviewed	p.P416S	0.998	187	0%	83	45.8%	4	25%	benign(0.002)	tolerated(0.12)	neutral(0.261)	HMMPfam_A_deamin,HMMSmart_SM00552
CNTNAP4	85445	genome.wustl.edu	37	16	76482082	76482082	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033401.3	+1	reviewed	p.E237D	0.188	265	0%	84	40.5%	0	-	-	-	-	NULL
CNTNAP4	85445	genome.wustl.edu	37	16	76483724	76483724	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000476707	+1	known	p.A350V	1.000	181	0%	67	49.3%	0	-	benign(0.082)	tolerated(0.1)	neutral(0.292)	NULL
CNTNAP4	85445	genome.wustl.edu	37	16	76528937	76528937	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138994.3	+1	validated	p.C664*	1.000	299	0%	134	47.8%	0	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
CNTNAP4	85445	genome.wustl.edu	37	16	76556147	76556147	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033401.3	+1	reviewed	p.S916F	0.962	43	0%	21	42.9%	0	-	-	-	-	NULL
MON1B	22879	genome.wustl.edu	37	16	77227453	77227453	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014940.2	+1	validated	p.P85L	0.058	39	0%	17	35.3%	22	45.4%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
ADAMTS18	170692	genome.wustl.edu	37	16	77398190	77398190	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199355.2	-1	reviewed	p.S289	0.004	184	0%	84	36.9%	0	-	-	-	-	"superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAMTS18	170692	genome.wustl.edu	37	16	77401474	77401474	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199355.2	-1	reviewed	p.Y214	0.001	78	0%	24	62.5%	0	-	-	-	-	NULL
NUDT7	283927	genome.wustl.edu	37	16	77775538	77775538	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105663.1	+1	reviewed	p.P136	0.756	54	0%	27	37%	9	77.7%	-	-	-	HMMPfam_NUDIX,superfamily_NUDIX_hydrolase
VAT1L	57687	genome.wustl.edu	37	16	77859146	77859146	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020927.1	+1	provisional	p.G123*	1.000	48	0%	31	29%	1	0%	-	-	-	superfamily_GroES_like,HMMPfam_ADH_N
VAT1L	57687	genome.wustl.edu	37	16	77859227	77859227	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020927.1	+1	provisional	p.P150T	1.000	69	0%	49	40.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_GroES_like
VAT1L	57687	genome.wustl.edu	37	16	77910270	77910270	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020927.1	+1	provisional	p.I242	1.000	252	0%	136	50%	0	-	-	-	-	HMMPfam_ADH_zinc_N,superfamily_NAD(P)-bd
VAT1L	57687	genome.wustl.edu	37	16	78011572	78011572	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020927.1	+1	provisional	p.R414W	1.000	151	0%	98	48%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DYNLRB2	83657	genome.wustl.edu	37	16	80583473	80583473	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130897.1	+1	provisional	p.R58C	1.000	266	0%	127	42.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Robl_LC7
ATMIN	23300	genome.wustl.edu	37	16	81077129	81077129	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015251.2	+1	validated	p.H342Q	0.928	43	0%	24	33.3%	14	35.7%	possibly_damaging(0.58)	tolerated(0.46)	neutral(0.211)	NULL
ATMIN	23300	genome.wustl.edu	37	16	81077136	81077136	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015251.2	+1	validated	p.P345T	1.000	41	0%	23	65.2%	14	64.2%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	NULL
GCSH	2653	genome.wustl.edu	37	16	81121253	81121253	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004483.4	-1	reviewed	p.V82A	1.000	331	0%	135	39.3%	38	39.4%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_GCV_H,superfamily_Single hybrid motif
PKD1L2	114780	genome.wustl.edu	37	16	81157262	81157262	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052892.3	-1	reviewed	p.A2159	0.068	31	0%	31	38.7%	0	-	-	-	-	NULL
PKD1L2	114780	genome.wustl.edu	37	16	81185371	81185371	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000360678	-1	known	e10+1	1.000	54	0%	26	50%	0	-	-	-	-	-
PKD1L2	114780	genome.wustl.edu	37	16	81185475	81185475	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052892.3	-1	reviewed	p.K1484E	1.000	74	0%	44	31.8%	1	0%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMPfam_PLAT,HMMSmart_SM00308,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)
PKD1L2	114780	genome.wustl.edu	37	16	81249946	81249946	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076780.1	-1	reviewed	p.A123T	0.000	15	0%	12	58.3%	0	-	benign(0.032)	tolerated(0.08)	neutral(0.301)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
CMIP	80790	genome.wustl.edu	37	16	81685821	81685821	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198390.2	+1	validated	p.K164T	1.000	81	0%	56	46.4%	28	39.2%	possibly_damaging(0.918)	deleterious(0.01)	deleterious(0.774)	NULL
PLCG2	5336	genome.wustl.edu	37	16	81979789	81979789	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002661.2	+1	validated	p.S1164F	1.000	138	0%	47	34%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_C2,superfamily_C2_CaLB
CDH13	1012	genome.wustl.edu	37	16	83520203	83520203	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001257.3	+1	reviewed	p.I301	1.000	40	0%	22	54.5%	1	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
MLYCD	23417	genome.wustl.edu	37	16	83948890	83948890	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012213.2	+1	reviewed	p.N426	0.998	10	0%	14	71.4%	9	33.3%	-	-	-	HMMPfam_MCD
OSGIN1	29948	genome.wustl.edu	37	16	83992869	83992869	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013370.3	+1	validated	p.N107	0.989	75	0%	60	38.3%	8	25%	-	-	-	superfamily_FAD/NAD(P)-binding domain
OSGIN1	29948	genome.wustl.edu	37	16	83994667	83994667	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013370.3	+1	validated	p.K243E	0.126	21	0%	11	54.5%	13	46.1%	benign(0.001)	tolerated(0.94)	-	superfamily_FAD/NAD(P)-binding domain
OSGIN1	29948	genome.wustl.edu	37	16	83999072	83999072	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013370.3	+1	validated	p.A381	0.727	8	0.000	10	0.400	6	66.6%	-	-	-	superfamily_FAD/NAD(P)-binding domain
MBTPS1	8720	genome.wustl.edu	37	16	84089719	84089719	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003791.2	-1	reviewed	p.K951N	1.000	98	0%	75	13.3%	94	23.4%	benign(0.112)	deleterious(0.02)	neutral(0.392)	NULL
TAF1C	9013	genome.wustl.edu	37	16	84215597	84215597	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005679.2	-1	reviewed	p.Q263H	1.000	21	0%	21	38.1%	30	50%	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	NULL
ADAD2	161931	genome.wustl.edu	37	16	84228703	84228703	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139174.3	+1	validated	p.C284	0.298	8	0.000	14	0.429	0	-	-	-	-	NULL
KCNG4	93107	genome.wustl.edu	37	16	84256451	84256451	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172347.1	-1	reviewed	p.A311V	0.002	35	0%	31	35.5%	0	-	benign(0)	tolerated(0.5)	neutral(0.010)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
KCNG4	93107	genome.wustl.edu	37	16	84256576	84256576	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172347.1	-1	reviewed	p.C269	0.993	33	0%	35	40%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
ATP2C2	9914	genome.wustl.edu	37	16	84449151	84449151	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014861.2	+1	validated	p.S193F	0.791	55	0%	56	26.8%	15	53.3%	benign(0.067)	tolerated(0.64)	neutral(0.007)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M
ENSG00000248612	0	genome.wustl.edu	37	16	84495475	84495475	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508094	-1	known	NULL	0.000	43	0%	68	41.2%	2	100%	-	-	-	-
ZDHHC7	55625	genome.wustl.edu	37	16	85012849	85012849	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145548.1	-1	validated	p.P198	0.235	356	0%	180	44.4%	27	51.8%	-	-	-	HMMPfam_zf-DHHC
KIAA0182	23199	genome.wustl.edu	37	16	85691111	85691111	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014615.2	+1	validated	p.Q514R	1.000	12	0%	11	45.5%	3	66.6%	probably_damaging(0.99)	tolerated(0.06)	deleterious(0.764)	NULL
KIAA0182	23199	genome.wustl.edu	37	16	85696594	85696594	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014615.2	+1	validated	p.Y756*	1.000	48	0%	38	50%	17	5.8%	-	-	-	NULL
GINS2	51659	genome.wustl.edu	37	16	85721125	85721125	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016095.2	-1	validated	p.A49V	0.968	84	0%	64	17.2%	19	36.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Psf2
IRF8	3394	genome.wustl.edu	37	16	85936688	85936688	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002163.2	+1	reviewed	p.Y23H	1.000	85	0%	64	32.8%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IRF,HMMSmart_IRF,superfamily_SSF46785
MTHFSD	64779	genome.wustl.edu	37	16	86580177	86580177	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022764.2	-1	validated	p.V143I	1.000	83	0%	56	50%	7	14.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_5-FTHF_cyc-lig,superfamily_SSF100950
FOXL1	2300	genome.wustl.edu	37	16	86612642	86612642	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005250.2	+1	validated	p.D105N	1.000	20	0%	33	18.2%	0	-	probably_damaging(0.963)	deleterious(0)	deleterious(0.850)	HMMPfam_Fork_head,HMMSmart_FH,superfamily_SSF46785
FBXO31	79791	genome.wustl.edu	37	16	87364778	87364778	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024568.1	-1	validated	NULL	0.000	12	0%	14	64.3%	15	40%	-	-	-	-
ZCCHC14	23174	genome.wustl.edu	37	16	87448933	87448933	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015144.2	-1	validated	p.S338F	1.000	324	0%	206	44.7%	4	50%	unknown(0)	deleterious(0)	-	HMMPfam_SAM_1,superfamily_SAM/Pointed domain
KLHDC4	54758	genome.wustl.edu	37	16	87799488	87799488	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017566.3	-1	validated	p.K3N	1.000	24	0%	44	40.9%	3	33.3%	benign(0.003)	-	-	NULL
SLC7A5	8140	genome.wustl.edu	37	16	87868147	87868147	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003486.5	-1	validated	p.I447	1.000	15	0%	15	60%	73	43.8%	-	-	-	HMMPfam_AA_permease
CA5A	763	genome.wustl.edu	37	16	87938412	87938412	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001739.1	-1	reviewed	p.G147S	0.214	61	0%	40	42.5%	0	-	benign(0)	tolerated(0.1)	neutral(0.286)	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase,PatternScan_ALPHA_CA_1
ZC3H18	124245	genome.wustl.edu	37	16	88665106	88665106	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144604.3	+1	validated	p.R306W	1.000	107	0%	65	38.5%	15	40%	unknown(0)	deleterious(0)	-	NULL
PIEZO1	9780	genome.wustl.edu	37	16	88787742	88787742	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000451779	-1	known	p.P1371S	0.001	13	0%	13	61.5%	6	0%	benign(0.025)	tolerated(0.23)	neutral(0.043)	NULL
PABPN1L	390748	genome.wustl.edu	37	16	88931486	88931486	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080487.1	-1	provisional	p.C170	0.227	6	0.000	13	0.385	0	-	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
CBFA2T3	863	genome.wustl.edu	37	16	88952428	88952428	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005187.4	-1	reviewed	p.I278	0.000	22	0%	13	38.5%	0	-	-	-	-	NULL
ZNF778	197320	genome.wustl.edu	37	16	89293933	89293933	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182531.2	+1	validated	p.R385*	0.654	176	0%	112	40.2%	7	14.2%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF778	197320	genome.wustl.edu	37	16	89294522	89294522	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182531.2	+1	validated	p.R581Q	0.363	99	0%	68	41.2%	8	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ANKRD11	29123	genome.wustl.edu	37	16	89345548	89345548	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013275.4	-1	validated	p.E2468K	1.000	22	0%	16	37.5%	68	39.7%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
DPEP1	1800	genome.wustl.edu	37	16	89704109	89704109	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128141.1	+1	validated	p.V308A	0.998	77	0%	51	45.1%	1	0%	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMPfam_Peptidase_M19,superfamily_SSF51556
ZNF276	92822	genome.wustl.edu	37	16	89804493	89804493	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113525.1	+1	validated	p.R562W	1.000	13	0%	21	23.8%	39	20.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
FANCA	2175	genome.wustl.edu	37	16	89842203	89842203	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000135.2	-1	reviewed	p.S616Y	0.026	75	0%	63	36.5%	7	14.2%	probably_damaging(0.959)	deleterious(0.01)	deleterious(0.808)	NULL
DEF8	54849	genome.wustl.edu	37	16	90030973	90030973	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207514.1	+1	validated	p.V476I	0.998	12	0.000	7	0.571	38	18.4%	probably_damaging(0.999)	tolerated(0.18)	deleterious(0.546)	HMMSmart_SM00109,superfamily_Cysteine-rich domain
DBNDD1	79007	genome.wustl.edu	37	16	90072799	90072799	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024043.2	-1	validated	p.R161W	1.000	20	0%	24	37.5%	35	65.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Dysbindin
GAS8	2622	genome.wustl.edu	37	16	90099228	90099228	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001481.2	+1	reviewed	p.H131Y	1.000	34	0%	39	25.6%	23	34.7%	benign(0.01)	tolerated(0.55)	neutral(0.007)	NULL
RNMTL1	55178	genome.wustl.edu	37	17	691223	691223	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018146.2	+1	provisional	p.D193G	1.000	178	0%	120	35%	16	68.7%	probably_damaging(0.975)	deleterious(0.01)	deleterious(0.823)	HMMPfam_SpoU_sub_bind,superfamily_SSF55315,superfamily_SSF75217
RNMTL1	55178	genome.wustl.edu	37	17	694838	694838	+	Silent	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018146.2	+1	provisional	p.P264	0.703	74	0%	71	38%	16	50%	-	-	-	HMMPfam_SpoU_methylase,superfamily_SSF75217
ABR	29	genome.wustl.edu	37	17	995089	995089	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021962.2	-1	reviewed	p.P116L	1.000	64	0%	63	38.1%	20	60%	possibly_damaging(0.8)	tolerated(0.32)	neutral(0.325)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
INPP5K	51763	genome.wustl.edu	37	17	1410318	1410318	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016532.3	-1	reviewed	p.P244	0.819	105	0%	97	44.3%	32	50%	-	-	-	HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like
PITPNA	5306	genome.wustl.edu	37	17	1437516	1437516	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006224.3	-1	reviewed	e10-1	1.000	84	0%	48	41.7%	1	100%	-	-	-	-
PITPNA	5306	genome.wustl.edu	37	17	1438748	1438748	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006224.3	-1	reviewed	p.G174D	1.000	89	0%	88	40.9%	25	12%	benign(0.092)	tolerated(0.24)	neutral(0.044)	HMMPfam_IP_trans,superfamily_SSF55961
RILP	83547	genome.wustl.edu	37	17	1550269	1550269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031430.2	-1	validated	p.G320D	0.212	59	0%	66	51.5%	21	66.6%	possibly_damaging(0.943)	tolerated(0.09)	deleterious(0.684)	NULL
PRPF8	10594	genome.wustl.edu	37	17	1561586	1561586	+	Silent	SNP	G	G	A	rs192097342	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006445.3	-1	reviewed	p.I1822	1.000	75	0%	87	46%	156	45.5%	-	-	-	NULL
PRPF8	10594	genome.wustl.edu	37	17	1579845	1579845	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006445.3	-1	reviewed	p.R781Q	1.000	43	0%	45	51.1%	62	51.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PROCN
PRPF8	10594	genome.wustl.edu	37	17	1585431	1585431	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006445.3	-1	reviewed	p.S142	0.997	198	0%	166	50.6%	56	51.7%	-	-	-	HMMPfam_PRO8NT
WDR81	124997	genome.wustl.edu	37	17	1628985	1628985	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000409644	+1	known	p.D244	0.995	15	0%	21	38.1%	7	42.8%	-	-	-	NULL
SERPINF2	5345	genome.wustl.edu	37	17	1648295	1648295	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000934.3	+1	reviewed	p.A2	0.824	48	0%	30	16.7%	2	0%	-	-	-	superfamily_Prot_inh_serpin
SERPINF1	5176	genome.wustl.edu	37	17	1675359	1675359	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002615.4	+1	validated	p.A211	0.932	74	0%	67	11.9%	32	3.1%	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SMYD4	114826	genome.wustl.edu	37	17	1704246	1704246	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052928.2	-1	validated	p.R148C	0.989	67	0%	42	40.5%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_TPR-like
RPA1	6117	genome.wustl.edu	37	17	1747885	1747885	+	Silent	SNP	G	G	A	rs189644474	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002945.3	+1	validated	p.A59	0.994	230	0.4%	149	36.9%	65	46.1%	-	-	-	HMMPfam_Rep-A_N,superfamily_Nucleic acid-binding proteins
DPH1	1801	genome.wustl.edu	37	17	1939913	1939913	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001383.3	+1	validated	p.R169H	1.000	54	0%	68	52.9%	34	52.9%	benign(0.308)	deleterious(0.05)	neutral(0.442)	HMMPfam_Diphthamide_syn
SMG6	23293	genome.wustl.edu	37	17	2203334	2203334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017575.4	-1	validated	p.P238L	0.004	81	0%	66	15.2%	8	25%	benign(0.004)	tolerated(0.93)	-	NULL
SMG6	23293	genome.wustl.edu	37	17	2203575	2203575	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017575.4	-1	validated	p.E158K	1.000	191	0%	126	48.4%	8	37.5%	benign(0.025)	deleterious(0)	neutral(0.446)	NULL
SMG6	23293	genome.wustl.edu	37	17	2203637	2203637	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017575.4	-1	validated	p.R137I	1.000	154	0%	110	43.6%	6	50%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
SMG6	23293	genome.wustl.edu	37	17	2203927	2203927	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017575.4	-1	validated	p.P40	0.977	63	0%	51	39.2%	3	33.3%	-	-	-	NULL
SGSM2	9905	genome.wustl.edu	37	17	2276317	2276317	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014853.2	+1	validated	p.V620A	1.000	30	0%	37	24.3%	42	45.2%	probably_damaging(0.99)	tolerated(0.12)	deleterious(0.702)	HMMSmart_TBC,superfamily_RabGAP_TBC
KIAA0664	23277	genome.wustl.edu	37	17	2603705	2603705	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015229.3	-1	validated	p.R375	1.000	5	0.000	18	0.444	77	36.3%	-	-	-	NULL
RAP1GAP2	23108	genome.wustl.edu	37	17	2866754	2866754	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015085.4	+1	reviewed	p.E93K	0.998	68	0%	53	41.5%	16	31.2%	probably_damaging(0.953)	deleterious(0)	deleterious(0.841)	NULL
OR1G1	8390	genome.wustl.edu	37	17	3030850	3030850	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000381953	-1	known	p.R37I	0.941	61	0%	44	22.7%	0	-	-	-	-	NULL
SPATA22	84690	genome.wustl.edu	37	17	3343569	3343569	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032598.4	-1	validated	p.K322E	1.000	87	0%	44	43.2%	0	-	benign(0.243)	tolerated(0.29)	neutral(0.054)	NULL
ASPA	443	genome.wustl.edu	37	17	3386854	3386854	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000049.2	+1	reviewed	p.A165V	1.000	268	0%	138	43.5%	0	-	benign(0.004)	tolerated(0.51)	neutral(0.009)	HMMPfam_AstE_AspA
TRPV3	162514	genome.wustl.edu	37	17	3458052	3458052	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145068.2	-1	reviewed	p.P31	0.000	20	0%	23	47.8%	1	100%	-	-	-	NULL
TAX1BP3	30851	genome.wustl.edu	37	17	3568031	3568031	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014604.2	-1	validated	p.G34E	1.000	104	0%	78	39.7%	76	27.6%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
GSG2	83903	genome.wustl.edu	37	17	3628176	3628176	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031965.2	+1	validated	p.A316V	0.000	22	0%	27	59.3%	10	60%	possibly_damaging(0.668)	deleterious(0.01)	deleterious(0.642)	NULL
CAMKK1	84254	genome.wustl.edu	37	17	3786350	3786350	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172207.2	-1	reviewed	p.V212I	1.000	26	0%	30	50%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
ATP2A3	489	genome.wustl.edu	37	17	3838545	3838545	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174953.1	-1	reviewed	p.A851T	1.000	18	0%	14	28.6%	11	27.2%	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	HMMPfam_Cation_ATPase_C,superfamily_Calcium ATPase transmembrane domain M
ZZEF1	23140	genome.wustl.edu	37	17	3917396	3917396	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015113.3	-1	validated	p.R2801W	0.599	27	0%	27	33.3%	15	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZZEF1	23140	genome.wustl.edu	37	17	3937466	3937466	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015113.3	-1	validated	p.L2143	0.970	49	0%	36	47.2%	18	27.7%	-	-	-	NULL
ZZEF1	23140	genome.wustl.edu	37	17	3953144	3953144	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015113.3	-1	validated	p.A1958V	0.980	59	0%	41	41.5%	7	42.8%	benign(0.152)	deleterious(0.02)	neutral(0.397)	NULL
ANKFY1	51479	genome.wustl.edu	37	17	4100813	4100813	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016376.3	-1	validated	p.L320V	0.231	63	0%	57	36.8%	18	44.4%	benign(0)	tolerated(0.43)	neutral(0.013)	HMMPfam_Ank,superfamily_ANK
SPNS2	124976	genome.wustl.edu	37	17	4435951	4435951	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001124758.1	+1	provisional	p.L303F	1.000	25	0%	32	31.2%	13	38.4%	benign(0.011)	tolerated(0.71)	neutral(0.002)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
MYBBP1A	10514	genome.wustl.edu	37	17	4445946	4445946	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105538.1	-1	validated	p.V995I	0.000	51	0%	56	37.5%	69	52.1%	benign(0.01)	tolerated(0.48)	neutral(0.011)	superfamily_ARM-type_fold
ALOX15	246	genome.wustl.edu	37	17	4535197	4535197	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001140.3	-1	validated	p.R599H	0.093	30	0%	19	47.4%	2	100%	benign(0.006)	tolerated(0.38)	neutral(0.018)	HMMPfam_Lipoxygenase,superfamily_Lipoxygenase
PELP1	27043	genome.wustl.edu	37	17	4574797	4574797	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014389.2	-1	validated	p.A1110	0.991	104	0%	86	41.9%	84	40.4%	-	-	-	NULL
ZMYND15	84225	genome.wustl.edu	37	17	4643965	4643965	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136046.1	+1	provisional	p.R41Q	0.490	72	0%	64	48.4%	0	-	benign(0.006)	deleterious(0)	neutral(0.445)	NULL
ZMYND15	84225	genome.wustl.edu	37	17	4647304	4647304	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136046.1	+1	provisional	p.Y466S	0.994	21	0%	26	42.3%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
VMO1	284013	genome.wustl.edu	37	17	4688807	4688807	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182566.2	-1	validated	p.Q153H	1.000	18	0%	26	57.7%	1	100%	possibly_damaging(0.66)	tolerated(0.09)	deleterious(0.529)	HMMPfam_VOMI,superfamily_VOMI
MINK1	50488	genome.wustl.edu	37	17	4799602	4799602	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153827.4	+1	reviewed	p.S1194T	1.000	47	0%	48	50%	70	35.7%	benign(0.017)	tolerated(0.07)	neutral(0.320)	HMMPfam_CNH,HMMSmart_SM00036
ENO3	2027	genome.wustl.edu	37	17	4858761	4858761	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001976.3	+1	reviewed	p.G243S	1.000	37	0%	22	45.5%	6	50%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	HMMPfam_Enolase_C,superfamily_Enolase C-terminal domain-like
CAMTA2	23125	genome.wustl.edu	37	17	4873250	4873250	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015099.3	-1	validated	p.R1046W	1.000	19	0%	33	42.4%	21	57.1%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_P-loop containing nucleoside triphosphate hydrolases
CAMTA2	23125	genome.wustl.edu	37	17	4877005	4877005	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015099.3	-1	validated	p.I692	1.000	17	0%	18	33.3%	17	29.4%	-	-	-	NULL
USP6	9098	genome.wustl.edu	37	17	5071302	5071302	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004505.2	+1	validated	p.R1038C	1.000	139	0%	77	39%	4	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_UCH,superfamily_Cysteine proteinases
ZNF594	84622	genome.wustl.edu	37	17	5084876	5084876	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000381752	-1	known	p.R104I	0.859	172	0%	107	55.1%	2	0%	possibly_damaging(0.806)	deleterious(0.04)	deleterious(0.652)	HMMPfam_zf-C2H2,superfamily_SSF57667
DHX33	56919	genome.wustl.edu	37	17	5364376	5364376	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020162.2	-1	reviewed	p.N244	0.944	41	0%	30	50%	8	62.5%	-	-	-	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
MIS12	79003	genome.wustl.edu	37	17	5392282	5392282	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024039.1	+1	provisional	p.E34*	1.000	69	0%	48	43.8%	23	34.7%	-	-	-	HMMPfam_Mis12
NLRP1	22861	genome.wustl.edu	37	17	5437235	5437235	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033004.3	-1	reviewed	p.R1012W	0.000	85	0%	68	48.5%	1	0%	probably_damaging(0.96)	deleterious(0)	deleterious(0.848)	NULL
PITPNM3	83394	genome.wustl.edu	37	17	6367615	6367615	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031220.3	-1	reviewed	p.E677	1.000	14	0.000	9	0.444	6	50%	-	-	-	NULL
PITPNM3	83394	genome.wustl.edu	37	17	6371654	6371654	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031220.3	-1	reviewed	p.R594H	0.991	26	0%	11	45.5%	10	40%	possibly_damaging(0.487)	tolerated(0.06)	deleterious(0.485)	HMMPfam_DDHD
SLC13A5	284111	genome.wustl.edu	37	17	6589619	6589619	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177550.3	-1	validated	p.F538L	0.080	149	0%	101	40.6%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Na_sulph_symp
SLC13A5	284111	genome.wustl.edu	37	17	6589624	6589624	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177550.3	-1	validated	p.V537F	0.909	145	0%	94	45.7%	0	-	possibly_damaging(0.772)	deleterious(0)	deleterious(0.732)	HMMPfam_Na_sulph_symp
FBXO39	162517	genome.wustl.edu	37	17	6684050	6684050	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153230.2	+1	validated	p.F288S	1.000	23	0%	21	28.6%	0	-	benign(0.109)	tolerated(0.23)	neutral(0.050)	superfamily_SSF52047
FBXO39	162517	genome.wustl.edu	37	17	6684067	6684067	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153230.2	+1	validated	p.K294E	1.000	23	0%	22	45.5%	0	-	probably_damaging(0.979)	tolerated(0.24)	neutral(0.459)	superfamily_SSF52047
TEKT1	83659	genome.wustl.edu	37	17	6722605	6722605	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053285.1	-1	reviewed	p.T88I	0.095	225	0%	102	34.3%	1	0%	benign(0.002)	tolerated(0.34)	neutral(0.023)	HMMPfam_Tektin
ALOX12	239	genome.wustl.edu	37	17	6902630	6902630	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000697.2	+1	validated	p.V218I	0.998	56	0%	56	51.8%	1	0%	possibly_damaging(0.863)	deleterious(0.01)	deleterious(0.739)	HMMPfam_Lipoxygenase,superfamily_Lipoxygenase
ENSG00000215067	0	genome.wustl.edu	37	17	6913184	6913184	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000399540	-1	known	p.A10T	0.077	63	0%	74	33.8%	15	53.3%	unknown(0)	-	-	NULL
C17orf49	124944	genome.wustl.edu	37	17	6920297	6920297	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142798.1	+1	validated	p.E160K	1.000	75	0%	60	38.3%	109	49.5%	possibly_damaging(0.675)	deleterious(0.05)	deleterious(0.585)	NULL
CLEC10A	10462	genome.wustl.edu	37	17	6981358	6981358	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182906.2	-1	reviewed	p.G48S	0.827	61	0%	60	56.7%	0	-	benign(0.003)	tolerated(0.95)	-	HMMPfam_Lectin_N
ASGR2	433	genome.wustl.edu	37	17	7010446	7010446	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001181.3	-1	reviewed	p.V179A	0.064	29	0%	40	37.5%	0	-	benign(0.085)	tolerated(0.52)	neutral(0.015)	HMMSmart_SM00034,superfamily_C-type lectin-like
ASGR2	433	genome.wustl.edu	37	17	7017475	7017475	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001181.3	-1	reviewed	p.R29C	0.000	104	1%	88	39.8%	0	-	benign(0.011)	tolerated(0.14)	neutral(0.250)	HMMPfam_Lectin_N
DLG4	1742	genome.wustl.edu	37	17	7106611	7106611	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001365.3	-1	reviewed	p.Q224	1.000	97	0%	87	20.7%	16	25%	-	-	-	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ
DLG4	1742	genome.wustl.edu	37	17	7107079	7107079	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001365.3	-1	reviewed	p.G132	0.991	23	0%	32	46.9%	9	66.6%	-	-	-	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ
DLG4	1742	genome.wustl.edu	37	17	7107530	7107530	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001365.3	-1	reviewed	p.E89D	1.000	205	0%	162	38.9%	10	20%	benign(0)	tolerated(0.47)	neutral(0.011)	HMMPfam_MAGUK_N_PEST
ACADVL	37	genome.wustl.edu	37	17	7127320	7127320	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000018.2	+1	reviewed	p.R456C	1.000	125	0.8%	97	44.3%	400	48%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Acyl-CoA_dh_1,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like
DVL2	1856	genome.wustl.edu	37	17	7137401	7137401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004422.2	-1	reviewed	p.D61N	1.000	23	0%	18	38.9%	23	56.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DIX,HMMSmart_SM00021
GABARAP	11337	genome.wustl.edu	37	17	7144227	7144227	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007278.1	-1	reviewed	p.E100D	1.000	136	0%	83	26.5%	727	26.2%	benign(0)	tolerated(1)	-	HMMPfam_MAP1_LC3,superfamily_Ubiquitin-like
SLC2A4	6517	genome.wustl.edu	37	17	7189942	7189942	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042.2	+1	reviewed	p.N508	0.996	47	0%	54	50%	0	-	-	-	-	NULL
EIF5A	1984	genome.wustl.edu	37	17	7213091	7213091	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143760.1	+1	validated	p.S76L	1.000	83	0%	82	45.1%	1184	46.1%	-	-	-	superfamily_Transl_SH3_like
NEURL4	84461	genome.wustl.edu	37	17	7226348	7226348	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032442.2	-1	validated	p.R838*	1.000	24	0%	21	52.4%	23	47.8%	-	-	-	HMMSmart_SM00588
NEURL4	84461	genome.wustl.edu	37	17	7226840	7226840	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032442.2	-1	validated	p.T794I	1.000	99	0%	91	42.9%	15	46.6%	possibly_damaging(0.662)	deleterious(0)	deleterious(0.678)	HMMSmart_SM00588
NEURL4	84461	genome.wustl.edu	37	17	7228684	7228684	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032442.2	-1	validated	p.R492H	1.000	33	0%	39	53.8%	12	58.3%	possibly_damaging(0.535)	tolerated(0.12)	neutral(0.442)	NULL
ACAP1	9744	genome.wustl.edu	37	17	7253451	7253451	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014716.3	+1	validated	p.A656D	1.000	20	0%	17	47.1%	6	50%	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
SPEM1	374768	genome.wustl.edu	37	17	7324802	7324802	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199339.2	+1	provisional	p.R270W	0.638	16	0%	18	55.6%	0	-	possibly_damaging(0.868)	deleterious(0)	deleterious(0.782)	NULL
C17orf74	201243	genome.wustl.edu	37	17	7330089	7330089	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175734.4	+1	validated	p.R260H	0.042	17	0%	17	41.2%	0	-	benign(0.006)	tolerated(0.12)	neutral(0.261)	NULL
CHRNB1	1140	genome.wustl.edu	37	17	7352061	7352061	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000747.2	+1	reviewed	p.L258	1.000	124	0%	102	40.2%	4	50%	-	-	-	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
POLR2A	5430	genome.wustl.edu	37	17	7400989	7400989	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000937.3	+1	validated	p.R334	0.582	48	0%	52	32.7%	76	48.6%	-	-	-	HMMPfam_RNA_pol_Rpb1_1,superfamily_SSF64484
POLR2A	5430	genome.wustl.edu	37	17	7401470	7401470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000937.3	+1	validated	p.R426C	1.000	62	0%	55	43.6%	83	45.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_RNA_pol_Rpb1_2,superfamily_SSF64484
TNFSF12-TNFSF13	407977	genome.wustl.edu	37	17	7463440	7463440	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172089.2	+1	reviewed	p.G234R	0.605	24	0%	36	38.9%	20	45%	possibly_damaging(0.846)	tolerated(0.69)	neutral(0.327)	HMMPfam_TNF,HMMSmart_TNF,superfamily_TNF_like
SENP3	26168	genome.wustl.edu	37	17	7473788	7473788	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000321337	+1	known	p.T486A	1.000	19	0%	35	31.4%	56	41%	possibly_damaging(0.862)	tolerated(0.07)	deleterious(0.652)	HMMPfam_Peptidase_C48,superfamily_SSF54001
EIF4A1	1973	genome.wustl.edu	37	17	7478520	7478520	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001416.2	+1	validated	p.D97N	1.000	121	0%	82	37.8%	614	46%	possibly_damaging(0.561)	tolerated(0.53)	neutral(0.199)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
TP53	7157	genome.wustl.edu	37	17	7574003	7574003	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000546.4	-1	reviewed	p.R342*	0.307	26	0%	15	53.3%	65	24.6%	-	-	-	HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain
EFNB3	1949	genome.wustl.edu	37	17	7611772	7611772	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001406.3	+1	reviewed	p.R145	0.987	32	0%	38	42.1%	15	53.3%	-	-	-	HMMPfam_Ephrin,superfamily_Cupredoxins
DNAH2	146754	genome.wustl.edu	37	17	7664229	7664229	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020877.2	+1	validated	p.S986Y	0.999	153	0%	104	51%	0	-	possibly_damaging(0.885)	tolerated(0.05)	deleterious(0.692)	NULL
DNAH2	146754	genome.wustl.edu	37	17	7678157	7678157	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020877.2	+1	validated	p.R1528*	1.000	265	0%	155	47.1%	0	-	-	-	-	HMMPfam_DHC_N2
DNAH2	146754	genome.wustl.edu	37	17	7683532	7683532	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020877.2	+1	validated	p.A1927V	1.000	119	0%	83	45.8%	0	-	possibly_damaging(0.772)	deleterious(0.01)	deleterious(0.693)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH2	146754	genome.wustl.edu	37	17	7691431	7691431	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020877.2	+1	validated	p.F2257L	1.000	45	0%	45	35.6%	0	-	benign(0.007)	tolerated(0.27)	neutral(0.034)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH2	146754	genome.wustl.edu	37	17	7695252	7695252	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020877.2	+1	validated	p.G2306	0.025	76	1.3%	88	35.2%	0	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH2	146754	genome.wustl.edu	37	17	7704989	7704989	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020877.2	+1	validated	p.E2931D	1.000	26	0%	32	71.9%	0	-	benign(0.202)	tolerated(0.61)	neutral(0.024)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH2	146754	genome.wustl.edu	37	17	7734128	7734128	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020877.2	+1	validated	p.F4066L	1.000	42	0%	27	55.6%	0	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_Dynein_heavy
KDM6B	23135	genome.wustl.edu	37	17	7751193	7751193	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080424.1	+1	provisional	p.P529	0.073	4	0.000	8	0.750	5	80%	-	-	-	NULL
KDM6B	23135	genome.wustl.edu	37	17	7755004	7755004	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080424.1	+1	provisional	p.A1352V	1.000	4	0.000	6	0.833	79	45.5%	benign(0.068)	tolerated(0.06)	neutral(0.327)	HMMSmart_SM00558
KDM6B	23135	genome.wustl.edu	37	17	7756402	7756402	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080424.1	+1	provisional	p.G1565	1.000	29	0%	31	29%	114	45.6%	-	-	-	NULL
TMEM88	92162	genome.wustl.edu	37	17	7758398	7758398	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203411.1	+1	validated	p.A2	0.994	23	0%	27	51.9%	3	66.6%	-	-	-	NULL
CHD3	1107	genome.wustl.edu	37	17	7797129	7797129	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005271.2	+1	reviewed	p.G326D	1.000	62	0%	39	53.8%	35	51.4%	probably_damaging(0.956)	-	-	NULL
CHD3	1107	genome.wustl.edu	37	17	7803219	7803219	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005271.2	+1	reviewed	p.E909D	0.996	93	0%	74	52.7%	103	50.4%	benign(0.004)	-	-	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
KCNAB3	9196	genome.wustl.edu	37	17	7826850	7826850	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004732.2	-1	reviewed	p.R354H	1.000	25	0%	12	50%	2	50%	benign(0.019)	deleterious(0.04)	neutral(0.350)	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red
CNTROB	116840	genome.wustl.edu	37	17	7839693	7839693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380262	+1	known	p.R202C	1.000	49	0%	53	47.2%	9	33.3%	possibly_damaging(0.938)	deleterious(0)	deleterious(0.828)	NULL
ALOX12B	242	genome.wustl.edu	37	17	7976235	7976235	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139.2	-1	reviewed	p.V654M	0.950	47	0%	57	49.1%	3	33.3%	benign(0.257)	deleterious(0.03)	neutral(0.391)	HMMPfam_Lipoxygenase,superfamily_Lipoxygenase
ALOX12B	242	genome.wustl.edu	37	17	7989523	7989523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139.2	-1	reviewed	p.V55M	0.226	23	0%	29	37.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PLAT,HMMSmart_LH2,superfamily_Lipase_LipOase
PFAS	5198	genome.wustl.edu	37	17	8161181	8161181	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012393.2	+1	reviewed	p.P378S	0.999	92	0%	91	49.5%	9	22.2%	possibly_damaging(0.946)	deleterious(0.02)	deleterious(0.773)	HMMPfam_AIRS,superfamily_PurM N-terminal domain-like
PFAS	5198	genome.wustl.edu	37	17	8166274	8166274	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012393.2	+1	reviewed	p.R458M	1.000	270	0.4%	244	43.4%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_AIRS_C,superfamily_PurM C-terminal domain-like
SLC25A35	399512	genome.wustl.edu	37	17	8194241	8194241	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201520.1	-1	provisional	p.G216	1.000	27	0%	24	50%	14	64.2%	-	-	-	superfamily_Mitoch_carrier
SLC25A35	399512	genome.wustl.edu	37	17	8195854	8195854	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_201520.1	-1	provisional	p.Q143P	1.000	144	0.7%	105	13.3%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Mitoch_carrier,HMMPfam_Mito_carr
ARHGEF15	22899	genome.wustl.edu	37	17	8219101	8219101	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173728.2	+1	reviewed	p.R484C	0.831	52	0%	46	39.1%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain
ARHGEF15	22899	genome.wustl.edu	37	17	8222360	8222360	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173728.2	+1	reviewed	p.R690H	1.000	38	0%	28	39.3%	1	0%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	superfamily_SSF50729
KRBA2	124751	genome.wustl.edu	37	17	8274638	8274638	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213597.2	-1	provisional	p.T72M	0.056	146	0%	100	41%	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
NDEL1	81565	genome.wustl.edu	37	17	8383849	8383849	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000299734	+1	known	p.A337	0.000	10	0%	14	35.7%	1	0%	-	-	-	NULL
MYH10	4628	genome.wustl.edu	37	17	8413228	8413228	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005964.1	-1	validated	p.Q967*	1.000	156	0%	102	52%	21	14.2%	-	-	-	NULL
MFSD6L	162387	genome.wustl.edu	37	17	8701866	8701866	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152599.3	-1	validated	p.T191	0.024	67	1.5%	54	50%	0	-	-	-	-	NULL
PIK3R5	23533	genome.wustl.edu	37	17	8785182	8785182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142633.1	-1	validated	p.R741Q	0.921	72	0%	71	40.8%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PI3K_1B_p101
NTN1	9423	genome.wustl.edu	37	17	9143092	9143092	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004822.2	+1	reviewed	p.D541G	1.000	9	0.000	11	0.364	5	40%	possibly_damaging(0.705)	tolerated(0.11)	deleterious(0.526)	superfamily_TIMP_like,HMMPfam_NTR,HMMSmart_C345C
STX8	9482	genome.wustl.edu	37	17	9408431	9408431	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004853.2	-1	reviewed	p.W124*	1.000	118	0%	75	48%	27	14.8%	-	-	-	NULL
STX8	9482	genome.wustl.edu	37	17	9460798	9460798	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004853.2	-1	reviewed	p.I55	1.000	158	0%	108	39.8%	23	78.2%	-	-	-	NULL
USP43	124739	genome.wustl.edu	37	17	9580183	9580183	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153210.3	+1	validated	p.G318	0.000	75	0%	54	42.6%	7	42.8%	-	-	-	HMMPfam_UCH,superfamily_SSF54001
USP43	124739	genome.wustl.edu	37	17	9596489	9596489	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153210.3	+1	validated	p.A467T	0.274	110	0%	70	11.4%	5	40%	possibly_damaging(0.808)	tolerated(0.11)	deleterious(0.576)	HMMPfam_UCH,superfamily_SSF54001
MYH13	8735	genome.wustl.edu	37	17	10248790	10248790	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003802.2	-1	validated	p.I469	1.000	223	0%	137	49.6%	0	-	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH13	8735	genome.wustl.edu	37	17	10265472	10265472	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003802.2	-1	validated	p.F156L	1.000	163	0%	112	36.6%	0	-	possibly_damaging(0.86)	deleterious(0)	deleterious(0.777)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH8	4626	genome.wustl.edu	37	17	10310041	10310041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002472.2	-1	reviewed	p.P713S	1.000	95	0%	48	47.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH8	4626	genome.wustl.edu	37	17	10316009	10316009	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002472.2	-1	reviewed	p.S395Y	1.000	161	0%	84	44%	0	-	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH8	4626	genome.wustl.edu	37	17	10317756	10317756	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002472.2	-1	reviewed	p.R284I	1.000	226	0%	89	46.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH8	4626	genome.wustl.edu	37	17	10322069	10322069	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002472.2	-1	reviewed	p.P135L	1.000	166	0%	116	32.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH4	4622	genome.wustl.edu	37	17	10355321	10355321	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017533.2	-1	validated	p.K1225N	1.000	137	0%	57	36.8%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Myosin_tail_1
MYH4	4622	genome.wustl.edu	37	17	10360929	10360929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017533.2	-1	validated	p.P569S	1.000	377	0%	205	43.4%	0	-	probably_damaging(0.984)	deleterious(0.02)	deleterious(0.814)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH4	4622	genome.wustl.edu	37	17	10367894	10367894	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017533.2	-1	validated	p.S181	0.975	247	0%	120	40.8%	0	-	-	-	-	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH1	4619	genome.wustl.edu	37	17	10406061	10406061	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005963.3	-1	reviewed	p.V1035	1.000	487	0%	199	39.7%	0	-	-	-	-	NULL
MYH1	4619	genome.wustl.edu	37	17	10419660	10419660	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005963.3	-1	reviewed	e2-1	1.000	409	0%	191	38.2%	0	-	-	-	-	-
MYH2	4620	genome.wustl.edu	37	17	10432210	10432210	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100112.1	-1	reviewed	p.R1181C	1.000	112	0%	88	42%	0	-	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	HMMPfam_Myosin_tail_1
MYH2	4620	genome.wustl.edu	37	17	10433235	10433235	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100112.1	-1	reviewed	p.E952K	1.000	829	0%	421	37.1%	0	-	benign(0.017)	deleterious(0.01)	neutral(0.406)	NULL
MYH3	4621	genome.wustl.edu	37	17	10541193	10541193	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002470.2	-1	reviewed	p.K1263	0.977	91	0%	75	45.3%	0	-	-	-	-	HMMPfam_Myosin_tail_1
MYH3	4621	genome.wustl.edu	37	17	10546191	10546191	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002470.2	-1	reviewed	p.F511L	1.000	208	0%	128	46.9%	1	100%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH3	4621	genome.wustl.edu	37	17	10549321	10549321	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002470.2	-1	reviewed	p.Y309	0.878	125	0%	83	44.6%	0	-	-	-	-	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
SCO1	6341	genome.wustl.edu	37	17	10596133	10596133	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004589.2	-1	reviewed	p.P170	0.994	237	0%	129	41.1%	25	36%	-	-	-	HMMPfam_SCO1-SenC,superfamily_Thiordxn-like_fd
PIRT	644139	genome.wustl.edu	37	17	10728592	10728592	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101387.1	-1	validated	p.S124L	0.973	93	0%	47	44.7%	0	-	possibly_damaging(0.706)	deleterious(0)	deleterious(0.699)	NULL
DNAH9	1770	genome.wustl.edu	37	17	11556132	11556132	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001372.3	+1	reviewed	p.R803I	1.000	205	0%	113	46.9%	1	100%	possibly_damaging(0.951)	tolerated(0.1)	deleterious(0.680)	NULL
DNAH9	1770	genome.wustl.edu	37	17	11584134	11584134	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001372.3	+1	reviewed	p.R1224H	1.000	50	0%	34	44.1%	0	-	benign(0.362)	deleterious(0)	deleterious(0.559)	NULL
DNAH9	1770	genome.wustl.edu	37	17	11603094	11603094	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001372.3	+1	reviewed	p.R1640Q	0.399	110	0%	47	48.9%	1	0%	possibly_damaging(0.928)	tolerated(0.57)	neutral(0.382)	HMMPfam_DHC_N2
DNAH9	1770	genome.wustl.edu	37	17	11651013	11651013	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001372.3	+1	reviewed	p.L2180	0.998	42	0%	25	52%	0	-	-	-	-	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH9	1770	genome.wustl.edu	37	17	11711114	11711114	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001372.3	+1	reviewed	p.S2829I	0.996	40	0%	27	37%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH9	1770	genome.wustl.edu	37	17	11725368	11725368	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001372.3	+1	reviewed	p.R2947*	0.203	70	0%	48	39.6%	0	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH9	1770	genome.wustl.edu	37	17	11840762	11840762	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001372.3	+1	reviewed	p.L4195F	1.000	43	0%	37	10.8%	0	-	possibly_damaging(0.62)	deleterious(0.01)	deleterious(0.622)	HMMPfam_Dynein_heavy
MAP2K4	6416	genome.wustl.edu	37	17	12028610	12028610	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003010.2	+1	reviewed	e8-1	1.000	126	0%	83	15.7%	1	0%	-	-	-	-
MYOCD	93649	genome.wustl.edu	37	17	12656375	12656375	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153604.2	+1	reviewed	p.Q590	0.000	72	0%	51	51%	1	0%	-	-	-	NULL
ARHGAP44	9912	genome.wustl.edu	37	17	12888085	12888085	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014859.4	+1	validated	p.S726L	0.909	18	0%	15	33.3%	8	37.5%	possibly_damaging(0.907)	deleterious(0)	deleterious(0.805)	NULL
LOC100287710	100287710	genome.wustl.edu	37	17	13400075	13400075	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343489.1	+1	model	p.E153K	0.659	16	0%	26	42.3%	3	33.3%	-	-	-	NULL
COX10	1352	genome.wustl.edu	37	17	14005513	14005513	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001303.3	+1	reviewed	p.S193F	0.002	116	0%	42	28.6%	7	28.5%	benign(0.002)	tolerated(0.08)	neutral(0.300)	HMMPfam_UbiA
TEKT3	64518	genome.wustl.edu	37	17	15215747	15215747	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031898.2	-1	reviewed	p.R310	1.000	76	0%	38	52.6%	0	-	-	-	-	HMMPfam_Tektin
TRIM16	10626	genome.wustl.edu	37	17	15532179	15532179	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006470.3	-1	reviewed	p.D482G	1.000	75	0%	67	43.3%	15	33.3%	possibly_damaging(0.931)	tolerated(0.1)	deleterious(0.664)	HMMPfam_SPRY,HMMSmart_SM00449
NCOR1	9611	genome.wustl.edu	37	17	15968804	15968804	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006311.2	-1	reviewed	p.T1649M	1.000	169	0.6%	85	40%	27	40.7%	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	NULL
NCOR1	9611	genome.wustl.edu	37	17	15971393	15971393	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006311.2	-1	reviewed	p.S1519L	0.801	92	0%	40	52.5%	16	31.2%	possibly_damaging(0.704)	deleterious(0.05)	deleterious(0.599)	NULL
TRPV2	51393	genome.wustl.edu	37	17	16330159	16330159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016113.3	+1	reviewed	p.A407T	0.000	67	0%	50	42%	3	0%	benign(0)	tolerated(0.5)	neutral(0.010)	NULL
TRPV2	51393	genome.wustl.edu	37	17	16335353	16335353	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016113.3	+1	reviewed	p.Q576	0.000	20	0%	25	40%	6	0%	-	-	-	HMMPfam_Ion_trans
FAM211A	388341	genome.wustl.edu	37	17	16347401	16347401	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113567.1	-1	validated	p.D179G	1.000	10	0%	15	60%	1	100%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	superfamily_RNI-like
FAM211A	388341	genome.wustl.edu	37	17	16351164	16351164	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113567.1	-1	validated	p.Q162H	1.000	12	0%	19	47.4%	0	-	benign(0.027)	deleterious(0.02)	neutral(0.385)	NULL
ZNF287	57336	genome.wustl.edu	37	17	16455334	16455334	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020653.2	-1	validated	p.E708*	0.030	375	0%	156	39.7%	4	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF287	57336	genome.wustl.edu	37	17	16456177	16456177	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020653.2	-1	validated	p.H427Y	0.985	230	0%	107	12.1%	2	0%	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF624	57547	genome.wustl.edu	37	17	16526499	16526499	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020787.2	-1	validated	p.R567	0.819	171	0%	84	34.5%	2	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CCDC144A	9720	genome.wustl.edu	37	17	16593855	16593855	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014695.1	+1	provisional	p.S47	0.001	30	0%	23	52.2%	0	-	-	-	-	NULL
CCDC144A	9720	genome.wustl.edu	37	17	16638657	16638657	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000328495	+1	known	p.N508S	0.356	139	0.7%	78	41%	0	-	-	-	-	NULL
CCDC144A	9720	genome.wustl.edu	37	17	16664822	16664822	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014695.1	+1	provisional	p.Q1152H	0.240	123	0%	56	30.4%	1	0%	benign(0.091)	deleterious(0.03)	neutral(0.371)	NULL
MPRIP	23164	genome.wustl.edu	37	17	17041249	17041249	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015134.2	+1	validated	p.S252	0.037	26	0%	14	57.1%	28	21.4%	-	-	-	NULL
MPRIP	23164	genome.wustl.edu	37	17	17077285	17077285	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015134.2	+1	validated	p.Q829*	1.000	18	0%	13	30.8%	52	7.6%	-	-	-	NULL
FLCN	201163	genome.wustl.edu	37	17	17118300	17118300	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144997.5	-1	reviewed	p.N513H	1.000	45	0%	47	42.6%	32	68.7%	probably_damaging(0.994)	tolerated(0.47)	neutral(0.463)	NULL
COPS3	8533	genome.wustl.edu	37	17	17174286	17174286	+	Silent	SNP	G	G	A	rs184858444	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003653.2	-1	reviewed	p.F74	0.996	165	0%	86	44.2%	86	54.6%	-	-	-	NULL
RAI1	10743	genome.wustl.edu	37	17	17698462	17698462	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030665.3	+1	reviewed	p.A734T	0.004	33	0%	36	47.2%	8	50%	benign(0)	tolerated(1)	-	NULL
RAI1	10743	genome.wustl.edu	37	17	17699829	17699829	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030665.3	+1	reviewed	p.V1189	0.001	11	0%	10	40%	14	35.7%	-	-	-	NULL
TOM1L2	146691	genome.wustl.edu	37	17	17788064	17788064	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001082968.1	-1	validated	p.R129*	0.997	58	0%	46	45.7%	6	0%	-	-	-	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288
LRRC48	83450	genome.wustl.edu	37	17	17907721	17907721	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130090.1	+1	validated	p.E348	0.046	122	0%	66	40.9%	11	54.5%	-	-	-	NULL
ATPAF2	91647	genome.wustl.edu	37	17	17921934	17921934	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145691.3	-1	reviewed	p.A267T	0.993	32	0%	35	14.3%	42	0%	probably_damaging(0.991)	tolerated(0.13)	deleterious(0.697)	NULL
ATPAF2	91647	genome.wustl.edu	37	17	17929705	17929705	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145691.3	-1	reviewed	p.D117G	1.000	149	0%	96	37.5%	26	30.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_ATP12
MYO15A	51168	genome.wustl.edu	37	17	18054221	18054221	+	Silent	SNP	C	C	T	rs146973735	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016239.3	+1	reviewed	p.P2489	0.009	9	0.000	21	0.381	1	100%	-	-	-	NULL
MYO15A	51168	genome.wustl.edu	37	17	18058728	18058728	+	Missense_Mutation	SNP	G	G	A	rs148595690	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016239.3	+1	reviewed	p.R2814Q	0.928	9	0.000	9	0.444	1	0%	benign(0.116)	-	-	NULL
LLGL1	3996	genome.wustl.edu	37	17	18137994	18137994	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004140.3	+1	reviewed	p.I294M	0.999	120	0%	118	49.2%	16	50%	possibly_damaging(0.612)	deleterious(0)	deleterious(0.656)	superfamily_WD40 repeat-like,HMMPfam_LLGL
FLII	2314	genome.wustl.edu	37	17	18154235	18154235	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002018.2	-1	reviewed	p.A565T	1.000	31	0%	42	50%	137	44.5%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_GEL,HMMPfam_Gelsolin,superfamily_SSF55753
SMCR7	125170	genome.wustl.edu	37	17	18167652	18167652	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148886.1	+1	reviewed	p.D324	0.000	14	0%	15	46.7%	14	50%	-	-	-	NULL
EVPLL	645027	genome.wustl.edu	37	17	18284993	18284993	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145127.1	+1	validated	p.P99S	0.029	29	0%	25	60%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_Spectrin
LGALS9C	654346	genome.wustl.edu	37	17	18387231	18387231	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040078.2	+1	validated	p.G28R	0.982	232	0.4%	180	27.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases
FBXW10	10517	genome.wustl.edu	37	17	18654313	18654313	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031456.3	+1	validated	p.D357H	0.187	317	0%	194	44.8%	0	-	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	superfamily_WD40 repeat-like,superfamily_F-box domain
FBXW10	10517	genome.wustl.edu	37	17	18682100	18682100	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031456.3	+1	validated	p.S882I	0.000	62	0%	42	38.1%	0	-	possibly_damaging(0.948)	deleterious(0)	deleterious(0.836)	NULL
RNF112	7732	genome.wustl.edu	37	17	19315844	19315844	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007148.4	+1	reviewed	p.G43	0.703	42	0%	48	25%	0	-	-	-	-	superfamily_SSF57850
RNF112	7732	genome.wustl.edu	37	17	19316290	19316290	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007148.4	+1	reviewed	p.R141C	0.414	8	0.000	5	0.800	1	0%	-	-	-	superfamily_SSF52540
ALDH3A1	218	genome.wustl.edu	37	17	19642968	19642968	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000691.4	-1	reviewed	p.D323	0.725	12	0%	12	66.7%	0	-	-	-	-	HMMPfam_Aldedh,superfamily_ALDH-like
ALDH3A1	218	genome.wustl.edu	37	17	19646045	19646045	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000333946	-1	known	p.P215L	0.000	7	0.000	11	0.364	0	-	-	-	-	NULL
ULK2	9706	genome.wustl.edu	37	17	19685380	19685380	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142610.1	-1	reviewed	p.R821W	1.000	41	0%	34	41.2%	11	72.7%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
ULK2	9706	genome.wustl.edu	37	17	19746483	19746483	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142610.1	-1	reviewed	p.S199N	1.000	144	0%	83	39.8%	9	55.5%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SPECC1	92521	genome.wustl.edu	37	17	20135607	20135607	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033553.1	+1	validated	p.R747H	0.997	24	0%	11	45.5%	93	50.5%	probably_damaging(1)	tolerated(0.17)	deleterious(0.559)	NULL
CCDC144C	348254	genome.wustl.edu	37	17	20295741	20295741	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000425519	+1	known	p.K1054T	0.213	117	0%	49	34.7%	0	-	probably_damaging(0.983)	deleterious(0.05)	deleterious(0.774)	NULL
DHRS7B	25979	genome.wustl.edu	37	17	21094335	21094335	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015510.3	+1	validated	p.K283E	1.000	201	0%	126	48.4%	73	57.5%	possibly_damaging(0.46)	tolerated(0.31)	neutral(0.178)	superfamily_NAD(P)-bd
TMEM11	8834	genome.wustl.edu	37	17	21101684	21101684	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003876.2	-1	validated	p.A178T	1.000	56	0%	57	52.6%	68	50%	possibly_damaging(0.948)	tolerated(0.09)	deleterious(0.688)	NULL
MAP2K3	5606	genome.wustl.edu	37	17	21203950	21203950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145109.2	+1	reviewed	p.G87S	1.000	59	0%	43	20.9%	110	45.4%	benign(0.003)	tolerated(0.08)	neutral(0.300)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
LOC440419	440419	genome.wustl.edu	37	17	25749603	25749603	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_040504.2	+1	model	NULL	0.001	10	0.000	9	0.444	0	-	-	-	-	-
NOS2	4843	genome.wustl.edu	37	17	26105793	26105793	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000625.4	-1	reviewed	p.E402K	1.000	61	0%	35	28.6%	0	-	possibly_damaging(0.698)	deleterious(0)	deleterious(0.696)	HMMPfam_NO_synthase,superfamily_Nitric oxide (NO) synthase oxygenase domain
C17orf108	201229	genome.wustl.edu	37	17	26207174	26207174	+	Silent	SNP	C	C	T	rs113552125	byCluster;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508862	-1	known	p.Q85	0.000	35	0%	35	34.3%	2	50%	-	-	-	NULL
NLK	51701	genome.wustl.edu	37	17	26449683	26449683	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016231.4	+1	validated	p.N171	1.000	412	0.2%	129	53.5%	6	33.3%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
TNFAIP1	7126	genome.wustl.edu	37	17	26667447	26667447	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021137.4	+1	reviewed	p.A106	0.996	77	0%	78	47.4%	37	32.4%	-	-	-	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
SEBOX	645832	genome.wustl.edu	37	17	26691867	26691867	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080837.2	-1	validated	p.T74A	1.000	33	0%	32	28.1%	0	-	probably_damaging(0.999)	tolerated(0.35)	deleterious(0.511)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
VTN	7448	genome.wustl.edu	37	17	26695018	26695018	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000638.3	-1	reviewed	p.A348T	0.992	9	0.000	18	0.500	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Hemopexin,PatternScan_HEMOPEXIN
SARM1	23098	genome.wustl.edu	37	17	26711558	26711558	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015077.2	+1	validated	p.R424W	0.721	8	0.000	12	0.500	0	-	-	-	-	NULL
FOXN1	8456	genome.wustl.edu	37	17	26864205	26864205	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003593.2	+1	reviewed	p.P566	0.002	31	0%	26	26.9%	0	-	-	-	-	NULL
SPAG5	10615	genome.wustl.edu	37	17	26912360	26912360	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006461.3	-1	reviewed	p.D644Y	1.000	66	0%	65	49.2%	46	32.6%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
KIAA0100	9703	genome.wustl.edu	37	17	26961803	26961803	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014680.2	-1	validated	p.L934	1.000	107	0.9%	77	49.4%	43	41.8%	-	-	-	NULL
KIAA0100	9703	genome.wustl.edu	37	17	26962611	26962611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014680.2	-1	validated	p.G665E	0.929	24	0%	20	35%	34	50%	benign(0.008)	tolerated(0.25)	neutral(0.037)	NULL
KIAA0100	9703	genome.wustl.edu	37	17	26970296	26970296	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014680.2	-1	validated	p.R94	0.790	117	0%	89	41.6%	17	47%	-	-	-	NULL
SUPT6H	6830	genome.wustl.edu	37	17	27011946	27011946	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003170.3	+1	validated	p.R818	1.000	64	0%	41	22%	43	16.2%	-	-	-	HMMSmart_SM00732
SUPT6H	6830	genome.wustl.edu	37	17	27026860	27026860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003170.3	+1	validated	p.V1504M	1.000	140	0.7%	110	38.2%	55	43.6%	probably_damaging(0.983)	deleterious(0.01)	deleterious(0.835)	NULL
RAB34	83871	genome.wustl.edu	37	17	27042513	27042513	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144943.1	-1	validated	p.V188A	1.000	56	0%	63	44.4%	117	47%	benign(0.041)	tolerated(0.18)	neutral(0.059)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
TLCD1	116238	genome.wustl.edu	37	17	27051660	27051660	+	Silent	SNP	G	G	A	rs148128712	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138463.3	-1	validated	p.G204	0.371	73	0%	59	37.3%	26	46.1%	-	-	-	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_TLC
TLCD1	116238	genome.wustl.edu	37	17	27051812	27051812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138463.3	-1	validated	p.R154C	0.270	34	0%	34	47.1%	17	47%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_TLC
NEK8	284086	genome.wustl.edu	37	17	27067510	27067510	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178170.2	+1	reviewed	p.H483Y	1.000	28	0%	28	60.7%	4	0%	benign(0.001)	tolerated(1)	-	superfamily_RCC1/BLIP-II
TRAF4	9618	genome.wustl.edu	37	17	27075639	27075639	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004295.3	+1	reviewed	p.T245	0.183	23	0%	17	23.5%	200	53%	-	-	-	HMMPfam_zf-TRAF,superfamily_TRAF domain-like
C17orf63	55731	genome.wustl.edu	37	17	27086836	27086836	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077498.1	-1	validated	p.A47	0.941	112	0%	85	42.4%	17	41.1%	-	-	-	NULL
PHF12	57649	genome.wustl.edu	37	17	27233900	27233900	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033561.1	-1	validated	p.I885S	1.000	62	0%	62	17.7%	44	6.8%	possibly_damaging(0.923)	deleterious(0.01)	deleterious(0.778)	NULL
SEZ6	124925	genome.wustl.edu	37	17	27285066	27285066	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178860.4	-1	validated	p.V734A	1.000	25	0%	18	44.4%	0	-	benign(0.405)	deleterious(0)	deleterious(0.575)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
MYO18A	399687	genome.wustl.edu	37	17	27425844	27425844	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_078471.3	-1	validated	p.D1260	1.000	113	0%	104	51.9%	15	46.6%	-	-	-	NULL
TAOK1	57551	genome.wustl.edu	37	17	27837899	27837899	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020791.1	+1	validated	p.N531	1.000	170	0%	71	47.9%	2	0%	-	-	-	superfamily_Protein kinase-like (PK-like)
TP53I13	90313	genome.wustl.edu	37	17	27898736	27898736	+	Missense_Mutation	SNP	G	G	A	rs78481811		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138349.2	+1	provisional	p.R104Q	0.998	55	1.8%	86	47.7%	74	56.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
GIT1	28964	genome.wustl.edu	37	17	27902888	27902888	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085454.1	-1	validated	p.V574A	0.987	24	0%	46	63%	49	53%	benign(0.003)	tolerated(0.68)	neutral(0.002)	NULL
ANKRD13B	124930	genome.wustl.edu	37	17	27935228	27935228	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152345.4	+1	validated	p.V131M	1.000	62	0%	57	26.3%	8	37.5%	possibly_damaging(0.936)	tolerated(0.14)	deleterious(0.631)	superfamily_Ankyrin repeat
EFCAB5	374786	genome.wustl.edu	37	17	28407095	28407095	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198529.3	+1	validated	p.A1011	0.999	200	0%	124	46%	0	-	-	-	-	NULL
NSRP1	84081	genome.wustl.edu	37	17	28511663	28511663	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032141.2	+1	validated	p.G216	0.831	65	0%	29	51.7%	9	66.6%	-	-	-	NULL
CPD	1362	genome.wustl.edu	37	17	28750601	28750601	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001304.3	+1	reviewed	p.E579*	1.000	303	0%	144	41%	7	28.5%	-	-	-	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,superfamily_SSF53187
ATAD5	79915	genome.wustl.edu	37	17	29195422	29195422	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024857.3	+1	provisional	p.K1102R	0.852	485	0%	180	40%	2	50%	probably_damaging(0.986)	deleterious(0.03)	deleterious(0.799)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ATAD5	79915	genome.wustl.edu	37	17	29214209	29214209	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024857.3	+1	provisional	e19-1	1.000	318	0%	122	50%	0	-	-	-	-	-
ATAD5	79915	genome.wustl.edu	37	17	29219634	29219634	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024857.3	+1	provisional	p.S1423N	0.950	269	0%	123	39%	3	0%	benign(0.043)	deleterious(0.01)	neutral(0.408)	superfamily_P-loop containing nucleoside triphosphate hydrolases
RNF135	84282	genome.wustl.edu	37	17	29324485	29324485	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000434242	+1	known	p.G66R	0.000	39	0%	37	29.7%	0	-	unknown(0)	-	-	NULL
LOC400590	400590	genome.wustl.edu	37	17	29361626	29361626	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_042032.2	+1	model	NULL	0.996	14	0.000	6	0.667	1	100%	-	-	-	-
NF1	4763	genome.wustl.edu	37	17	29657347	29657347	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042492.2	+1	reviewed	p.T1881	1.000	293	0%	152	40.8%	12	58.3%	-	-	-	NULL
RAB11FIP4	84440	genome.wustl.edu	37	17	29849043	29849043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032932.3	+1	validated	p.R290Q	1.000	52	3.8%	52	55.8%	22	54.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SUZ12	23512	genome.wustl.edu	37	17	30274675	30274675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015355.2	+1	reviewed	p.E142D	1.000	530	0.2%	252	42.1%	3	0%	probably_damaging(0.963)	tolerated(0.51)	neutral(0.415)	NULL
LRRC37B	114659	genome.wustl.edu	37	17	30348735	30348735	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052888.2	+1	validated	p.K190N	0.001	117	0%	55	45.5%	6	33.3%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
LRRC37B	114659	genome.wustl.edu	37	17	30361941	30361941	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052888.2	+1	validated	p.R663	0.195	175	0%	84	46.4%	11	36.3%	-	-	-	HMMSmart_SM00369,superfamily_L domain-like
RHOT1	55288	genome.wustl.edu	37	17	30529839	30529839	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033568.1	+1	validated	p.V418M	1.000	534	0%	190	36.8%	16	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF52540
RHOT1	55288	genome.wustl.edu	37	17	30530949	30530949	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033568.1	+1	validated	p.A458V	1.000	334	0%	143	39.2%	25	52%	benign(0.086)	tolerated(0.47)	neutral(0.017)	HMMPfam_Miro,superfamily_SSF52540
MYO1D	4642	genome.wustl.edu	37	17	31087633	31087633	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015194.1	-1	provisional	p.R350C	1.000	258	0%	105	48.6%	17	29.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
ENSG00000226049	0	genome.wustl.edu	37	17	32366110	32366110	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000430493	-1	known	p.E204V	1.000	414	0%	248	41.1%	3	0%	-	-	-	NULL
TMEM132E	124842	genome.wustl.edu	37	17	32959770	32959770	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207313.1	+1	provisional	p.R420	1.000	54	0%	49	42.9%	1	0%	-	-	-	NULL
TMEM132E	124842	genome.wustl.edu	37	17	32962042	32962042	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207313.1	+1	provisional	p.R548Q	0.896	9	0.000	7	0.714	0	-	possibly_damaging(0.865)	tolerated(0.11)	deleterious(0.607)	NULL
RFFL	117584	genome.wustl.edu	37	17	33348733	33348733	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001017368.1	-1	validated	p.R83H	1.000	61	0%	43	44.2%	12	33.3%	possibly_damaging(0.771)	deleterious(0.02)	deleterious(0.669)	superfamily_FYVE/PHD zinc finger
SLFN5	162394	genome.wustl.edu	37	17	33592417	33592417	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144975.3	+1	validated	p.A729V	0.010	162	0%	122	25.4%	10	10%	benign(0)	tolerated(0.15)	neutral(0.241)	superfamily_P-loop containing nucleoside triphosphate hydrolases
SLFN11	91607	genome.wustl.edu	37	17	33689952	33689952	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001104587.1	-1	validated	p.P292L	0.000	277	0%	158	50%	5	0%	benign(0.03)	deleterious(0.01)	neutral(0.407)	HMMPfam_AAA_4
SLFN14	342618	genome.wustl.edu	37	17	33885017	33885017	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129820.1	-1	provisional	p.V22A	0.555	115	0%	62	14.5%	0	-	probably_damaging(0.971)	tolerated(0.25)	neutral(0.450)	NULL
PEX12	5193	genome.wustl.edu	37	17	33904203	33904203	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000286.2	-1	reviewed	p.Q178H	1.000	106	0%	80	37.5%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pex2_Pex12
AP2B1	163	genome.wustl.edu	37	17	34009836	34009836	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001030006.1	+1	reviewed	p.N816S	1.000	134	0%	74	43.2%	88	45.4%	benign(0.049)	tolerated(0.73)	neutral(0.005)	HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,superfamily_Clathrin adaptor appendage domain
GAS2L2	246176	genome.wustl.edu	37	17	34079505	34079505	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139285.2	-1	validated	p.R122Q	1.000	39	0%	38	47.4%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
MMP28	79148	genome.wustl.edu	37	17	34094811	34094811	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024302.3	-1	reviewed	p.R376Q	0.989	39	0%	35	48.6%	0	-	-	-	-	NULL
TAF15	8148	genome.wustl.edu	37	17	34163188	34163188	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139215.1	+1	reviewed	p.G242	1.000	278	0%	109	44%	110	48.1%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
RDM1	201299	genome.wustl.edu	37	17	34247233	34247233	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145654.3	-1	reviewed	p.I237	0.282	511	0.2%	246	47.2%	0	-	-	-	-	superfamily_dsRNA-binding domain-like
MYO19	80179	genome.wustl.edu	37	17	34869278	34869278	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025109.5	-1	validated	p.I296	1.000	166	0%	103	39.8%	10	30%	-	-	-	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MRM1	79922	genome.wustl.edu	37	17	34964217	34964217	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024864.3	+1	validated	p.R250W	0.790	88	0%	79	50.6%	7	14.2%	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	HMMPfam_SpoU_methylase,superfamily_alpha/beta knot
MRM1	79922	genome.wustl.edu	37	17	34964441	34964441	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024864.3	+1	validated	p.V292	1.000	30	0%	26	42.3%	4	0%	-	-	-	HMMPfam_SpoU_methylase,superfamily_alpha/beta knot
C17orf78	284099	genome.wustl.edu	37	17	35733071	35733071	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173625.3	+1	validated	p.S13P	0.985	147	0%	72	54.2%	0	-	possibly_damaging(0.449)	tolerated(0.13)	neutral(0.399)	NULL
SYNRG	11276	genome.wustl.edu	37	17	35879084	35879084	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007247.4	-1	reviewed	p.E1302K	1.000	59	0%	25	64%	27	62.9%	possibly_damaging(0.947)	tolerated(0.1)	deleterious(0.677)	NULL
GPR179	440435	genome.wustl.edu	37	17	36484913	36484913	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004334.2	-1	validated	p.S1513	0.089	234	0%	148	40.5%	0	-	-	-	-	NULL
GPR179	440435	genome.wustl.edu	37	17	36490939	36490939	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004334.2	-1	validated	p.R541H	1.000	3	0.000	6	0.833	0	-	benign(0.067)	tolerated(0.41)	neutral(0.019)	HMMPfam_7tm_3
GPR179	440435	genome.wustl.edu	37	17	36498990	36498990	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004334.2	-1	validated	p.R228K	0.888	22	0%	28	39.3%	0	-	benign(0.003)	tolerated(1)	-	NULL
ARHGAP23	57636	genome.wustl.edu	37	17	36638790	36638790	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020876.1	+1	provisional	p.C832	1.000	10	0%	16	62.5%	8	25%	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
PSMB3	5691	genome.wustl.edu	37	17	36912144	36912144	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002795.2	+1	reviewed	p.R66H	1.000	64	0%	61	45.9%	417	46%	benign(0.146)	tolerated(0.12)	neutral(0.273)	HMMPfam_Proteasome,superfamily_SSF56235
PIP4K2B	8396	genome.wustl.edu	37	17	36927474	36927474	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003559.4	-1	reviewed	p.D287N	0.994	81	0%	74	51.4%	36	50%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	HMMPfam_PIP5K,HMMSmart_SM00330,superfamily_SAICAR synthase-like
C17orf98	388381	genome.wustl.edu	37	17	36993491	36993491	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080465.2	-1	validated	p.D70E	0.968	124	0%	82	22%	1	100%	benign(0.307)	tolerated(1)	neutral(0.096)	NULL
RPL23	9349	genome.wustl.edu	37	17	37008870	37008870	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000978.3	-1	reviewed	p.E71D	1.000	185	0%	104	41.3%	3226	47.2%	benign(0.016)	tolerated(0.33)	neutral(0.025)	HMMPfam_Ribosomal_L14,superfamily_Ribosomal protein L14
FBXO47	494188	genome.wustl.edu	37	17	37119115	37119115	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008777.2	-1	validated	p.I55S	0.998	180	0%	81	42%	0	-	possibly_damaging(0.909)	deleterious(0)	deleterious(0.806)	HMMPfam_F-box
FLJ43826	342666	genome.wustl.edu	37	17	37187700	37187700	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_040620.2	+1	model	NULL	0.000	78	0%	60	53.3%	0	-	-	-	-	-
CACNB1	782	genome.wustl.edu	37	17	37333570	37333570	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199247.1	-1	reviewed	p.L500	1.000	13	0.000	9	0.556	0	-	-	-	-	NULL
RPL19	6143	genome.wustl.edu	37	17	37359355	37359355	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000981.3	+1	reviewed	p.R117C	1.000	79	0%	64	45.3%	3764	48.7%	benign(0.001)	deleterious(0.02)	neutral(0.383)	HMMPfam_Ribosomal_L19e,superfamily_Ribosomal protein L19 (L19e)
FBXL20	84961	genome.wustl.edu	37	17	37431346	37431346	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032875.2	-1	validated	p.T235I	1.000	135	0%	92	50%	16	37.5%	possibly_damaging(0.932)	deleterious(0.01)	deleterious(0.784)	HMMSmart_SM00367,superfamily_RNI-like
MED1	5469	genome.wustl.edu	37	17	37565404	37565404	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004774.3	-1	reviewed	p.H1024Y	1.000	62	0%	58	46.6%	7	42.8%	unknown(0)	deleterious(0)	-	NULL
MED1	5469	genome.wustl.edu	37	17	37579656	37579656	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004774.3	-1	reviewed	p.Y340C	1.000	312	0%	158	43%	16	37.5%	unknown(0)	deleterious(0.02)	-	HMMPfam_Med1-Trap220
ERBB2	2064	genome.wustl.edu	37	17	37879820	37879820	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004448.2	+1	reviewed	p.A705	0.003	37	0%	34	52.9%	124	43.5%	-	-	-	superfamily_Protein kinase-like (PK-like)
GSDMB	55876	genome.wustl.edu	37	17	38061075	38061075	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042471.1	-1	reviewed	p.V401A	0.002	69	1.4%	37	32.4%	17	23.5%	possibly_damaging(0.892)	tolerated(0.05)	deleterious(0.697)	NULL
MED24	9862	genome.wustl.edu	37	17	38178256	38178256	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014815.3	-1	reviewed	p.R859*	1.000	43	0%	42	14.3%	103	0%	-	-	-	NULL
MED24	9862	genome.wustl.edu	37	17	38178658	38178658	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014815.3	-1	reviewed	p.E838K	1.000	26	0%	25	68%	80	36.2%	probably_damaging(0.99)	tolerated(0.21)	deleterious(0.485)	NULL
THRA	7067	genome.wustl.edu	37	17	38249402	38249402	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003250.4	+1	reviewed	p.R414W	1.000	30	0%	30	30%	39	38.4%	probably_damaging(0.966)	deleterious(0)	deleterious(0.853)	NULL
THRA	7067	genome.wustl.edu	37	17	38249485	38249485	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003250.4	+1	reviewed	p.Q441H	1.000	13	0.000	9	0.556	44	59%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
NR1D1	9572	genome.wustl.edu	37	17	38253454	38253454	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021724.2	-1	provisional	p.D78	0.013	72	0%	60	56.7%	9	33.3%	-	-	-	NULL
MSL1	339287	genome.wustl.edu	37	17	38282617	38282617	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012241.1	+1	validated	p.P54L	1.000	122	0%	96	30.2%	41	43.9%	benign(0)	tolerated(0.14)	neutral(0.249)	NULL
CASC3	22794	genome.wustl.edu	37	17	38318012	38318012	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007359.4	+1	reviewed	p.E102*	1.000	104	0%	66	47%	20	15%	-	-	-	NULL
RARA	5914	genome.wustl.edu	37	17	38506076	38506076	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000964.2	+1	validated	p.T123M	1.000	51	0%	48	29.2%	27	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
TNS4	84951	genome.wustl.edu	37	17	38652326	38652326	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032865.5	-1	validated	p.L118M	1.000	29	0%	30	23.3%	8	25%	possibly_damaging(0.945)	tolerated(0.07)	deleterious(0.709)	NULL
KRT222	125113	genome.wustl.edu	37	17	38813645	38813645	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152349.2	-1	validated	p.G206	0.487	649	0%	336	40.2%	0	-	-	-	-	NULL
KRT24	192666	genome.wustl.edu	37	17	38855715	38855715	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019016.2	-1	reviewed	p.L448M	1.000	85	1.2%	63	49.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Filament,PatternScan_IF
KRT26	353288	genome.wustl.edu	37	17	38926124	38926124	+	Missense_Mutation	SNP	G	G	A	rs188607342	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181539.4	-1	reviewed	p.T284M	0.000	176	0.6%	94	39.4%	0	-	possibly_damaging(0.836)	deleterious(0.02)	deleterious(0.703)	superfamily_Prefoldin,HMMPfam_Filament
KRT10	3858	genome.wustl.edu	37	17	38976300	38976300	+	Splice_Site	SNP	C	C	T	rs112752242	byCluster	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000421.3	-1	reviewed	e5+1	1.000	163	0%	117	37.6%	0	-	-	-	-	-
KRT12	3859	genome.wustl.edu	37	17	39021177	39021177	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000223.3	-1	reviewed	p.A230T	1.000	55	0%	36	44.4%	0	-	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_Filament
KRT39	390792	genome.wustl.edu	37	17	39118686	39118686	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213656.3	-1	reviewed	p.R280C	1.000	253	0%	121	36.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Filament
KRT39	390792	genome.wustl.edu	37	17	39122766	39122766	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213656.3	-1	reviewed	p.R115*	0.999	273	0.4%	125	44%	0	-	-	-	-	HMMPfam_Filament
KRTAP1-4	728255	genome.wustl.edu	37	17	39186036	39186036	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377747	-1	known	p.R99C	1.000	11	0%	13	53.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Keratin_B2
KRTAP4-12	83755	genome.wustl.edu	37	17	39279830	39279830	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031854.2	-1	reviewed	p.R182H	0.998	54	0%	70	17.1%	0	-	unknown(0)	tolerated(0.18)	-	NULL
KRTAP4-2	85291	genome.wustl.edu	37	17	39334307	39334307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033062.2	-1	reviewed	p.R37H	0.195	17	0%	19	26.3%	0	-	unknown(0)	deleterious(0.01)	-	HMMPfam_Keratin_B2
KRT33B	3884	genome.wustl.edu	37	17	39521085	39521085	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002279.3	-1	reviewed	p.R348Q	1.000	25	0%	33	18.2%	0	-	probably_damaging(0.96)	deleterious(0.02)	deleterious(0.786)	HMMPfam_Filament
KRT31	3881	genome.wustl.edu	37	17	39551105	39551105	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002277.2	-1	reviewed	p.D364E	0.991	59	0%	44	36.4%	0	-	benign(0.216)	tolerated(0.17)	neutral(0.080)	HMMPfam_Filament
KRT37	8688	genome.wustl.edu	37	17	39577646	39577646	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003770.4	-1	reviewed	p.R405Q	0.689	52	0%	47	59.6%	0	-	benign(0.343)	deleterious(0.04)	neutral(0.457)	HMMPfam_Filament,PatternScan_IF
KRT37	8688	genome.wustl.edu	37	17	39579081	39579081	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003770.4	-1	reviewed	p.Q227H	0.951	16	0%	17	52.9%	0	-	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_Filament
KRT37	8688	genome.wustl.edu	37	17	39580631	39580631	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003770.4	-1	reviewed	p.V49M	0.000	14	0%	24	54.2%	0	-	benign(0.002)	tolerated(0.05)	neutral(0.345)	NULL
KRT38	8687	genome.wustl.edu	37	17	39594526	39594526	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006771.3	-1	reviewed	p.R354C	0.988	38	0%	36	13.9%	0	-	possibly_damaging(0.703)	deleterious(0.02)	deleterious(0.635)	HMMPfam_Filament
KRT35	3886	genome.wustl.edu	37	17	39636967	39636967	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002280.4	-1	reviewed	p.R128H	0.999	21	0%	19	57.9%	1	0%	possibly_damaging(0.948)	deleterious(0)	deleterious(0.836)	HMMPfam_Filament
KRT19	3880	genome.wustl.edu	37	17	39680125	39680125	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002276.4	-1	reviewed	p.R358Q	1.000	13	0%	11	72.7%	87	6.8%	benign(0.025)	tolerated(0.19)	neutral(0.051)	HMMPfam_Filament
KRT19	3880	genome.wustl.edu	37	17	39680669	39680669	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002276.4	-1	reviewed	p.Q262*	1.000	38	0%	33	57.6%	82	4.8%	-	-	-	superfamily_Prefoldin,HMMPfam_Filament
KRT9	3857	genome.wustl.edu	37	17	39723956	39723956	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000226.3	-1	reviewed	p.S481R	0.835	288	0%	214	44.4%	0	-	unknown(0)	deleterious(0.02)	-	NULL
KRT16	3868	genome.wustl.edu	37	17	39767403	39767403	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005557.3	-1	reviewed	p.R284H	0.367	32	0%	24	45.8%	78	57.6%	probably_damaging(0.994)	tolerated(0.06)	deleterious(0.774)	HMMPfam_Filament
JUP	3728	genome.wustl.edu	37	17	39914987	39914987	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002230.2	-1	reviewed	p.G545C	0.984	12	0%	11	72.7%	260	48.4%	probably_damaging(0.953)	deleterious(0)	deleterious(0.841)	HMMSmart_ARM,superfamily_ARM-type_fold
JUP	3728	genome.wustl.edu	37	17	39920983	39920983	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002230.2	-1	reviewed	p.S380	0.055	20	0%	16	25%	187	44.3%	-	-	-	HMMPfam_Arm,HMMSmart_ARM,superfamily_ARM-type_fold
FKBP10	60681	genome.wustl.edu	37	17	39976559	39976559	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021939.3	+1	reviewed	p.V368I	1.000	36	0%	41	31.7%	128	63.2%	possibly_damaging(0.463)	tolerated(0.82)	neutral(0.152)	HMMPfam_FKBP_C,superfamily_SSF54534
NT5C3L	115024	genome.wustl.edu	37	17	39991330	39991330	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052935.4	-1	validated	p.R66W	0.772	145	0%	93	50.5%	49	46.9%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_UMPH-1,superfamily_HAD-like
ACLY	47	genome.wustl.edu	37	17	40034433	40034433	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001096.2	-1	reviewed	p.L804I	1.000	23	0%	22	45.5%	196	50.5%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_Citrate_synthase_core
TTC25	83538	genome.wustl.edu	37	17	40095415	40095415	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377543	+1	known	p.A350T	1.000	41	0%	24	37.5%	2	50%	-	-	-	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
KCNH4	23415	genome.wustl.edu	37	17	40315313	40315313	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012285.2	-1	reviewed	p.E839D	0.995	11	0%	23	39.1%	0	-	possibly_damaging(0.882)	tolerated(0.7)	neutral(0.346)	NULL
GHDC	84514	genome.wustl.edu	37	17	40342709	40342709	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032484.4	-1	validated	p.G407	0.009	15	0%	19	47.4%	20	35%	-	-	-	HMMPfam_GH3
STAT5B	6777	genome.wustl.edu	37	17	40359720	40359720	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012448.3	-1	reviewed	p.P645S	1.000	169	0%	86	37.2%	17	41.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550
STAT5B	6777	genome.wustl.edu	37	17	40364138	40364138	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012448.3	-1	reviewed	p.F515S	1.000	43	0%	54	40.7%	16	31.2%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_P53_like_DNA_bnd,HMMPfam_STAT_bind
STAT5B	6777	genome.wustl.edu	37	17	40375473	40375473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012448.3	-1	reviewed	p.E159D	1.000	91	2.2%	58	46.6%	13	38.4%	possibly_damaging(0.852)	tolerated(0.05)	deleterious(0.673)	HMMPfam_STAT_alpha,superfamily_STAT
HSD17B1P1	643646	genome.wustl.edu	37	17	40699333	40699333	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000225928	+1	known	p.V105M	0.008	11	0%	16	50%	2	0%	benign(0.006)	tolerated(1)	-	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
COASY	80347	genome.wustl.edu	37	17	40714711	40714711	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042532.2	+1	validated	p.S53F	0.999	8	0.000	10	0.700	63	57.1%	benign(0.281)	deleterious(0.04)	neutral(0.435)	NULL
FAM134C	162427	genome.wustl.edu	37	17	40734157	40734157	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178126.3	-1	validated	p.R359C	0.356	35	0%	30	46.7%	37	32.4%	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	NULL
TUBG2	27175	genome.wustl.edu	37	17	40811922	40811922	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016437.2	+1	validated	p.F40	0.992	15	0%	23	34.8%	5	0%	-	-	-	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ
TUBG2	27175	genome.wustl.edu	37	17	40817537	40817537	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016437.2	+1	validated	p.R217H	1.000	63	0%	60	40%	36	50%	possibly_damaging(0.944)	tolerated(0.11)	deleterious(0.660)	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ
EZH1	2145	genome.wustl.edu	37	17	40854574	40854574	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001991.3	-1	validated	p.I740	0.990	41	0%	21	28.6%	16	25%	-	-	-	NULL
PSME3	10197	genome.wustl.edu	37	17	40991365	40991365	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176863.1	+1	reviewed	p.R231W	1.000	133	0.8%	97	45.4%	38	50%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	HMMPfam_PA28_beta,superfamily_Prot_act_regA
G6PC	2538	genome.wustl.edu	37	17	41061432	41061432	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000151.2	+1	reviewed	p.S187P	1.000	178	0%	93	52.7%	0	-	probably_damaging(0.984)	tolerated(0.07)	deleterious(0.750)	HMMPfam_PAP2,HMMSmart_acidPPc,superfamily_AcPase_VanPerase
BRCA1	672	genome.wustl.edu	37	17	41223140	41223140	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007294.3	-1	reviewed	p.T1597	0.461	115	0%	69	46.4%	8	25%	-	-	-	NULL
BRCA1	672	genome.wustl.edu	37	17	41234451	41234451	+	Nonsense_Mutation	SNP	G	G	A	rs41293455	byCluster	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007294.3	-1	reviewed	p.R1443*	0.001	192	0%	123	43.1%	6	16.6%	-	-	-	NULL
BRCA1	672	genome.wustl.edu	37	17	41244723	41244723	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007294.3	-1	reviewed	p.A942V	0.028	245	0%	108	12%	4	0%	probably_damaging(0.959)	deleterious(0.03)	deleterious(0.767)	NULL
DHX8	1659	genome.wustl.edu	37	17	41584454	41584454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004941.1	+1	reviewed	p.E604D	1.000	29	0%	27	37%	19	42.1%	possibly_damaging(0.924)	deleterious(0.02)	deleterious(0.756)	HMMSmart_DEXDc,superfamily_SSF52540
DHX8	1659	genome.wustl.edu	37	17	41598247	41598247	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004941.1	+1	reviewed	p.K1022N	1.000	59	0%	34	52.9%	17	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HA2,superfamily_SSF52540
TMEM101	84336	genome.wustl.edu	37	17	42089384	42089384	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032376.2	-1	provisional	p.R229Q	0.974	36	0%	35	22.9%	55	50.9%	possibly_damaging(0.933)	tolerated(0.07)	deleterious(0.698)	NULL
HDAC5	10014	genome.wustl.edu	37	17	42161198	42161198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001015053.1	-1	reviewed	p.A778V	1.000	23	0%	25	16%	46	28.2%	benign(0.001)	tolerated(1)	-	HMMPfam_Hist_deacetyl,superfamily_Arginase/deacetylase
C17orf53	78995	genome.wustl.edu	37	17	42225701	42225701	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024032.3	+1	validated	p.G177E	0.079	63	0%	53	32.1%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC4A1	6521	genome.wustl.edu	37	17	42333080	42333080	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000342.3	-1	reviewed	p.M587I	0.919	70	0%	67	49.3%	0	-	benign(0.013)	deleterious(0.03)	neutral(0.365)	HMMPfam_HCO3_cotransp
ITGA2B	3674	genome.wustl.edu	37	17	42463230	42463230	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000419.3	-1	reviewed	p.L124M	1.000	24	0%	37	16.2%	0	-	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	superfamily_Integrin alpha N-terminal domain
GPATCH8	23131	genome.wustl.edu	37	17	42475391	42475391	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002909.1	-1	validated	p.A1352S	1.000	61	0%	54	11.1%	33	21.2%	probably_damaging(0.998)	tolerated(0.3)	deleterious(0.503)	NULL
GPATCH8	23131	genome.wustl.edu	37	17	42477196	42477196	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002909.1	-1	validated	p.A750V	0.388	118	0%	94	42.6%	14	71.4%	unknown(0)	tolerated(0.05)	-	NULL
GPATCH8	23131	genome.wustl.edu	37	17	42478499	42478499	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002909.1	-1	validated	p.A316T	1.000	236	0%	148	10.8%	5	0%	unknown(0)	deleterious(0)	-	NULL
FZD2	2535	genome.wustl.edu	37	17	42636007	42636007	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001466.2	+1	reviewed	p.T317	0.773	16	0%	31	48.4%	34	58.8%	-	-	-	HMMPfam_Frizzled
CCDC43	124808	genome.wustl.edu	37	17	42757952	42757952	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144609.2	-1	validated	e4+1	1.000	163	0.6%	85	43.5%	4	100%	-	-	-	-
CCDC43	124808	genome.wustl.edu	37	17	42759496	42759496	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144609.2	-1	validated	p.Q101H	1.000	182	0%	124	44.4%	16	37.5%	possibly_damaging(0.923)	deleterious(0.03)	deleterious(0.737)	NULL
GJC1	10052	genome.wustl.edu	37	17	42882790	42882790	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080383.1	-1	reviewed	p.E132D	0.985	181	0%	121	44.6%	1	0%	benign(0)	tolerated(0.83)	neutral(0.001)	NULL
HIGD1B	51751	genome.wustl.edu	37	17	42927728	42927728	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016438.2	+1	provisional	p.Y88	0.952	101	0%	80	42.5%	5	40%	-	-	-	NULL
CCDC103	388389	genome.wustl.edu	37	17	42980060	42980060	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213607.1	+1	provisional	p.G202S	0.103	30	0%	28	32.1%	1	0%	benign(0.023)	tolerated(0.51)	neutral(0.010)	NULL
GFAP	2670	genome.wustl.edu	37	17	42985443	42985443	+	Missense_Mutation	SNP	G	G	A	rs121909717	byCluster;byFrequency	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002055.3	-1	reviewed	p.R416W	0.999	108	0%	81	42%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
KIF18B	146909	genome.wustl.edu	37	17	43012237	43012237	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080443.1	-1	provisional	p.D180N	1.000	13	0%	17	58.8%	5	20%	benign(0.023)	tolerated(0.18)	neutral(0.057)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
PLCD3	113026	genome.wustl.edu	37	17	43195394	43195394	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000322765	-1	known	p.D409	0.572	14	0%	23	34.8%	29	51.7%	-	-	-	HMMPfam_PI-PLC-X,HMMSmart_SM00148,superfamily_PLC-like phosphodiesterases
MAP3K14	9020	genome.wustl.edu	37	17	43342550	43342550	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000344686	-1	known	p.A886T	1.000	45	0%	32	15.6%	7	14.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CRHR1	1394	genome.wustl.edu	37	17	43884240	43884240	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000293493	+1	known	p.S8	0.044	7	0.000	14	0.571	0	-	-	-	-	superfamily_SSF111418
SPPL2C	162540	genome.wustl.edu	37	17	43923709	43923709	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175882.2	+1	validated	p.A479	1.000	44	0%	55	47.3%	0	-	-	-	-	HMMSmart_SM00730,HMMPfam_Peptidase_A22B
SPPL2C	162540	genome.wustl.edu	37	17	43924089	43924089	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175882.2	+1	validated	p.D606G	0.386	22	0%	24	50%	0	-	possibly_damaging(0.915)	deleterious(0)	deleterious(0.811)	NULL
WNT3	7473	genome.wustl.edu	37	17	44846034	44846034	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030753.3	-1	reviewed	p.S240	0.990	23	0%	26	42.3%	1	100%	-	-	-	HMMPfam_wnt,HMMSmart_WNT1
WNT3	7473	genome.wustl.edu	37	17	44846064	44846064	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030753.3	-1	reviewed	p.I230	0.992	18	0%	25	36%	2	0%	-	-	-	HMMPfam_wnt,HMMSmart_WNT1
GOSR2	9570	genome.wustl.edu	37	17	45008567	45008567	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_054022.2	+1	reviewed	p.A66D	1.000	130	0%	74	47.3%	26	34.6%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	HMMPfam_V-SNARE
LRRC37A4P	55073	genome.wustl.edu	37	17	45127741	45127741	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000309965	+1	known	p.N136	0.001	197	0%	102	23.5%	10	20%	-	-	-	NULL
CDC27	996	genome.wustl.edu	37	17	45221335	45221335	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114091.1	-1	reviewed	p.V368I	1.000	71	0%	45	55.6%	27	55.5%	possibly_damaging(0.925)	tolerated(0.44)	neutral(0.386)	superfamily_TPR-like
ITGB3	3690	genome.wustl.edu	37	17	45363782	45363782	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000212.2	+1	reviewed	p.V257	1.000	39	0%	38	42.1%	2	0%	-	-	-	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_vWA-like
ITGB3	3690	genome.wustl.edu	37	17	45364441	45364441	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000212.2	+1	reviewed	p.K261	0.999	44	0%	25	48%	2	50%	-	-	-	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_vWA-like
C17orf57	124989	genome.wustl.edu	37	17	45412709	45412709	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152347.3	+1	provisional	p.E60*	0.062	177	0%	74	37.8%	2	50%	-	-	-	NULL
C17orf57	124989	genome.wustl.edu	37	17	45507192	45507192	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152347.3	+1	provisional	p.I835V	0.893	273	0%	188	34.6%	0	-	benign(0.067)	tolerated(0.23)	neutral(0.046)	superfamily_EF-hand
NPEPPS	9520	genome.wustl.edu	37	17	45623286	45623286	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006310.3	+1	reviewed	p.A89	0.630	414	0%	274	33.2%	18	33.3%	-	-	-	HMMPfam_Peptidase_M1,superfamily_SSF63737
NPEPPS	9520	genome.wustl.edu	37	17	45660159	45660159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006310.3	+1	reviewed	p.A198T	1.000	453	0%	190	26.3%	15	46.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Peptidase_M1,superfamily_SSF63737
TBKBP1	9755	genome.wustl.edu	37	17	45776070	45776070	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014726.2	+1	validated	p.A188V	0.252	25	0%	17	35.3%	12	8.3%	unknown(0)	tolerated(1)	-	NULL
SP2	6668	genome.wustl.edu	37	17	45993744	45993744	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003110.5	+1	reviewed	p.A103T	0.040	49	0%	42	23.8%	14	35.7%	benign(0)	tolerated(1)	-	NULL
PRR15L	79170	genome.wustl.edu	37	17	46030450	46030450	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024320.2	-1	provisional	p.F51V	1.000	117	0%	105	40%	15	26.6%	possibly_damaging(0.8)	deleterious(0.04)	deleterious(0.650)	NULL
NFE2L1	4779	genome.wustl.edu	37	17	46128928	46128928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003204.2	+1	validated	p.G150S	0.997	39	0%	30	30%	33	36.3%	benign(0)	tolerated(0.58)	neutral(0.005)	NULL
MIR1203	100302211	genome.wustl.edu	37	17	46233825	46233825	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000408812	-1	known	NULL	1.000	34	0%	27	40.7%	0	-	-	-	-	-
CALCOCO2	10241	genome.wustl.edu	37	17	46939646	46939646	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005831.3	+1	reviewed	p.E385*	1.000	428	0%	214	50%	38	44.7%	-	-	-	HMMPfam_CALCOCO1
ZNF652	22834	genome.wustl.edu	37	17	47394450	47394450	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145365.1	-1	validated	p.R213H	1.000	256	0%	146	43.8%	3	66.6%	possibly_damaging(0.812)	deleterious(0.01)	deleterious(0.711)	NULL
PHB	5245	genome.wustl.edu	37	17	47482415	47482415	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002634.2	-1	reviewed	p.R253H	1.000	6	0.000	17	0.471	404	50.2%	possibly_damaging(0.838)	deleterious(0.02)	deleterious(0.703)	NULL
LOC100131693	100131693	genome.wustl.edu	37	17	47502026	47502026	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001726582.1	-1	model	p.P87S	1.000	351	0%	220	42.7%	25	0%	-	-	-	HMMPfam_IF4E,superfamily_Translation initiation factor eIF4e
LOC100131693	100131693	genome.wustl.edu	37	17	47502271	47502271	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001726582.1	-1	model	p.E5A	1.000	204	0%	115	39.1%	0	-	-	-	-	HMMPfam_IF4E,superfamily_Translation initiation factor eIF4e
KAT7	11143	genome.wustl.edu	37	17	47904077	47904077	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007067.3	+1	provisional	p.V550	1.000	108	0%	65	30.8%	22	50%	-	-	-	HMMPfam_MOZ_SAS,superfamily_Acyl-CoA N-acyltransferases (Nat)
DLX3	1747	genome.wustl.edu	37	17	48069150	48069150	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005220.2	-1	reviewed	p.P199S	1.000	98	0%	113	41.6%	0	-	probably_damaging(0.994)	tolerated(0.15)	deleterious(0.693)	NULL
COL1A1	1277	genome.wustl.edu	37	17	48269365	48269365	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000088.3	-1	reviewed	p.G668	1.000	16	0%	17	64.7%	314	3.1%	-	-	-	HMMPfam_Collagen
COL1A1	1277	genome.wustl.edu	37	17	48271396	48271396	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000088.3	-1	reviewed	p.A559T	1.000	31	0%	36	41.7%	324	2.1%	unknown(0)	tolerated(0.17)	-	HMMPfam_Collagen
EME1	146956	genome.wustl.edu	37	17	48453429	48453429	+	Missense_Mutation	SNP	C	C	T	rs184924405	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152463.2	+1	reviewed	p.L260F	1.000	23	0%	26	38.5%	9	44.4%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ERCC4
EME1	146956	genome.wustl.edu	37	17	48456907	48456907	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152463.2	+1	reviewed	p.A442V	1.000	29	0%	24	45.8%	8	25%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ERCC4
RSAD1	55316	genome.wustl.edu	37	17	48557243	48557243	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018346.1	+1	provisional	p.V91A	1.000	94	1.1%	88	38.6%	16	37.5%	possibly_damaging(0.571)	deleterious(0)	deleterious(0.640)	HMMSmart_Elp3,HMMPfam_Radical_SAM,superfamily_SSF102114
LOC100288474	100288474	genome.wustl.edu	37	17	48562315	48562315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343568.1	-1	model	p.R12K	0.001	15	0%	16	50%	43	25.5%	-	-	-	NULL
MYCBPAP	84073	genome.wustl.edu	37	17	48593967	48593967	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032133.4	+1	validated	p.P81H	0.998	81	0%	46	28.3%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
LOC100288505	100288505	genome.wustl.edu	37	17	48614334	48614334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343569.1	-1	model	p.P395S	0.999	21	0.000	9	0.667	42	45.2%	-	-	-	NULL
CACNA1G	8913	genome.wustl.edu	37	17	48683574	48683574	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198397.1	+1	validated	p.P1538S	0.000	8	0.000	11	0.364	0	-	unknown(0)	-	-	NULL
ABCC3	8714	genome.wustl.edu	37	17	48736637	48736637	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000502426	+1	known	p.G257*	0.024	19	0%	18	55.6%	6	33.3%	-	-	-	NULL
ABCC3	8714	genome.wustl.edu	37	17	48746590	48746590	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003786.3	+1	reviewed	p.G676E	1.000	20	0%	29	41.4%	7	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC3	8714	genome.wustl.edu	37	17	48750847	48750847	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003786.3	+1	reviewed	p.T809	0.000	17	5.9%	17	64.7%	9	55.5%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC3	8714	genome.wustl.edu	37	17	48762138	48762138	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003786.3	+1	reviewed	p.D1394	0.946	20	0%	14	28.6%	24	58.3%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF2B	84643	genome.wustl.edu	37	17	51900950	51900950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032559.4	+1	validated	p.E186K	0.950	21	0%	12	33.3%	0	-	possibly_damaging(0.722)	deleterious(0.04)	deleterious(0.611)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ANKFN1	162282	genome.wustl.edu	37	17	54554865	54554865	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153228.2	+1	validated	p.H600R	1.000	171	0%	53	18.9%	0	-	possibly_damaging(0.937)	deleterious(0.02)	deleterious(0.766)	NULL
AKAP1	8165	genome.wustl.edu	37	17	55183250	55183250	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003488.3	+1	reviewed	p.S142L	0.000	88	0%	58	44.8%	45	46.6%	benign(0)	deleterious(0)	neutral(0.445)	NULL
CUEDC1	404093	genome.wustl.edu	37	17	55946494	55946494	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017949.1	-1	provisional	p.H310R	1.000	35	0%	27	22.2%	73	54.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
OR4D2	124538	genome.wustl.edu	37	17	56247836	56247836	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004707.3	+1	provisional	p.G274S	0.996	53	0%	49	32.7%	0	-	benign(0)	tolerated(0.09)	neutral(0.296)	HMMPfam_7tm_1,superfamily_SSF81321
EPX	8288	genome.wustl.edu	37	17	56271399	56271399	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000502.4	+1	reviewed	p.S180	0.191	5	0.000	11	0.455	0	-	-	-	-	HMMPfam_An_peroxidase,superfamily_Peroxidase_super
MKS1	54903	genome.wustl.edu	37	17	56295998	56295998	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017777.3	-1	reviewed	p.R58M	0.659	69	0%	61	39.3%	16	25%	benign(0.296)	tolerated(0.08)	neutral(0.391)	NULL
LPO	4025	genome.wustl.edu	37	17	56327801	56327801	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006151.2	+1	reviewed	p.V200A	0.000	89	0%	63	49.2%	0	-	benign(0.002)	tolerated(0.07)	neutral(0.319)	HMMPfam_An_peroxidase,superfamily_Peroxidase_super
MPO	4353	genome.wustl.edu	37	17	56355398	56355398	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000250.1	-1	reviewed	p.A332T	0.981	36	0%	44	43.2%	0	-	benign(0.418)	tolerated(0.26)	neutral(0.170)	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
MPO	4353	genome.wustl.edu	37	17	56357220	56357220	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000250.1	-1	reviewed	p.R135Q	0.000	16	0%	16	31.2%	0	-	benign(0.01)	tolerated(0.53)	neutral(0.008)	NULL
MPO	4353	genome.wustl.edu	37	17	56357783	56357783	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000250.1	-1	reviewed	p.S64	0.219	20	0%	13	46.2%	0	-	-	-	-	NULL
SUPT4H1	6827	genome.wustl.edu	37	17	56424919	56424919	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003168.1	-1	provisional	p.D68G	1.000	51	0%	33	21.2%	81	28.3%	benign(0.358)	tolerated(0.19)	neutral(0.163)	HMMPfam_Spt4,superfamily_RNA polymerase subunits
RNF43	54894	genome.wustl.edu	37	17	56440757	56440757	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017763.4	-1	validated	p.P154L	1.000	70	0%	57	52.6%	6	50%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
TEX14	56155	genome.wustl.edu	37	17	56634381	56634381	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198393.2	-1	reviewed	p.L1489	1.000	258	0%	115	41.7%	0	-	-	-	-	NULL
TRIM37	4591	genome.wustl.edu	37	17	57094720	57094720	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005207.2	-1	reviewed	p.R775*	1.000	389	0%	184	23.9%	6	33.3%	-	-	-	NULL
MIR301A	407027	genome.wustl.edu	37	17	57228573	57228573	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000385261	-1	known	NULL	1.000	167	0%	72	26.4%	0	-	-	-	-	-
SKA2	348235	genome.wustl.edu	37	17	57232441	57232441	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001100595.1	-1	validated	p.A2T	0.142	63	0%	60	38.3%	4	0%	unknown(0)	-	-	NULL
PRR11	55771	genome.wustl.edu	37	17	57262418	57262418	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018304.2	+1	validated	p.V44	0.000	141	0%	70	35.7%	12	50%	-	-	-	NULL
CLTC	1213	genome.wustl.edu	37	17	57733336	57733336	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004859.3	+1	reviewed	p.T306I	1.000	231	0%	113	46%	76	43.4%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Clathrin_propel,superfamily_Clathrin heavy-chain terminal domain
CLTC	1213	genome.wustl.edu	37	17	57743475	57743475	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004859.3	+1	reviewed	p.V552	0.635	371	0%	91	31.9%	84	51.1%	-	-	-	HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_ARM repeat
CLTC	1213	genome.wustl.edu	37	17	57751101	57751101	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004859.3	+1	reviewed	p.L796I	1.000	232	0%	61	47.5%	46	28.2%	benign(0.007)	tolerated(0.15)	neutral(0.241)	HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_ARM repeat
CLTC	1213	genome.wustl.edu	37	17	57768068	57768068	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004859.3	+1	reviewed	p.V1633	1.000	380	0%	137	39.4%	230	34.7%	-	-	-	NULL
HEATR6	63897	genome.wustl.edu	37	17	58144976	58144976	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022070.4	-1	validated	p.L353M	0.000	147	0%	123	37.4%	11	63.6%	unknown(0)	deleterious(0.04)	-	NULL
USP32	84669	genome.wustl.edu	37	17	58282844	58282844	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032582.3	-1	validated	p.P1071	0.997	244	0%	124	37.1%	9	66.6%	-	-	-	HMMPfam_UCH,superfamily_SSF54001
C17orf64	124773	genome.wustl.edu	37	17	58506891	58506891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181707.2	+1	validated	p.P200S	0.190	14	0%	21	38.1%	0	-	benign(0)	tolerated(1)	-	NULL
PPM1D	8493	genome.wustl.edu	37	17	58740668	58740668	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003620.2	+1	reviewed	p.E525*	1.000	84	0%	58	34.5%	12	33.3%	-	-	-	NULL
TBX4	9496	genome.wustl.edu	37	17	59560723	59560723	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018488.2	+1	reviewed	p.R495H	0.971	50	0%	56	48.2%	0	-	possibly_damaging(0.774)	deleterious(0.01)	deleterious(0.694)	NULL
NACA2	342538	genome.wustl.edu	37	17	59668286	59668286	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199290.3	-1	validated	p.L86I	0.996	373	0.3%	235	41.3%	0	-	benign(0.133)	deleterious(0.01)	neutral(0.417)	HMMPfam_NAC
BRIP1	83990	genome.wustl.edu	37	17	59761118	59761118	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032043.1	-1	reviewed	p.E1097*	0.506	407	0%	200	43.5%	7	71.4%	-	-	-	NULL
INTS2	57508	genome.wustl.edu	37	17	59947098	59947098	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020748.2	-1	validated	p.Q1018H	1.000	116	0%	63	34.9%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
INTS2	57508	genome.wustl.edu	37	17	59962294	59962294	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020748.2	-1	validated	p.R694Q	1.000	330	0%	137	40.1%	5	80%	benign(0.009)	tolerated(0.96)	neutral(0.001)	NULL
INTS2	57508	genome.wustl.edu	37	17	59975078	59975078	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020748.2	-1	validated	p.M452V	0.999	348	0%	139	10.1%	2	0%	benign(0.001)	tolerated(0.34)	neutral(0.023)	NULL
INTS2	57508	genome.wustl.edu	37	17	59988976	59988976	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020748.2	-1	validated	p.V295L	1.000	302	0%	168	38.7%	7	28.5%	benign(0.29)	tolerated(0.7)	neutral(0.091)	NULL
INTS2	57508	genome.wustl.edu	37	17	59996851	59996851	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020748.2	-1	validated	p.V195I	1.000	167	0%	74	43.2%	0	-	benign(0.002)	tolerated(0.52)	neutral(0.009)	NULL
MED13	9969	genome.wustl.edu	37	17	60088584	60088584	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005121.2	-1	reviewed	p.L432F	1.000	268	0%	111	37.8%	13	53.8%	benign(0)	tolerated(0.29)	neutral(0.029)	NULL
ENSG00000188755	0	genome.wustl.edu	37	17	60349343	60349343	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000339120	-1	known	p.R69W	0.939	66	0%	64	60.9%	0	-	benign(0.104)	deleterious(0)	neutral(0.453)	superfamily_RabGAP_TBC
TLK2	11011	genome.wustl.edu	37	17	60629676	60629676	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006852.3	+1	validated	p.S182N	1.000	189	0%	85	38.8%	10	40%	possibly_damaging(0.898)	deleterious(0.05)	deleterious(0.700)	NULL
TLK2	11011	genome.wustl.edu	37	17	60637440	60637440	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006852.3	+1	validated	p.R262*	1.000	399	0%	151	39.7%	8	25%	-	-	-	NULL
LOC100289012	100289012	genome.wustl.edu	37	17	60743391	60743391	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343575.1	-1	model	p.S315	0.000	11	0%	19	47.4%	0	-	-	-	-	NULL
MRC2	9902	genome.wustl.edu	37	17	60753892	60753892	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006039.3	+1	validated	p.G612R	1.000	23	0%	22	36.4%	20	55%	benign(0.347)	tolerated(0.27)	neutral(0.144)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
MRC2	9902	genome.wustl.edu	37	17	60769698	60769698	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006039.3	+1	validated	p.I1442	0.000	5	0.000	15	0.333	61	24.5%	-	-	-	NULL
TANC2	26115	genome.wustl.edu	37	17	61345221	61345221	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025185.3	+1	validated	p.Q308	0.996	52	0%	21	19%	4	50%	-	-	-	NULL
LOC342541	342541	genome.wustl.edu	37	17	61549409	61549409	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_292596.4	+1	model	p.K154E	0.978	17	0%	13	53.8%	2	0%	-	-	-	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
MAP3K3	4215	genome.wustl.edu	37	17	61766203	61766203	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203351.1	+1	reviewed	p.R309H	1.000	36	0%	47	46.8%	5	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
STRADA	92335	genome.wustl.edu	37	17	61781922	61781922	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003787.2	-1	reviewed	p.N293	0.556	2	0.000	4	1.000	18	33.3%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PSMC5	5705	genome.wustl.edu	37	17	61907804	61907804	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002805.4	+1	reviewed	p.I165	0.964	88	0%	57	45.6%	184	42.3%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
CSH1	1442	genome.wustl.edu	37	17	61972738	61972738	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022640.2	-1	reviewed	p.A184V	0.000	50	0%	37	43.2%	0	-	benign(0.145)	deleterious(0)	neutral(0.457)	NULL
SCN4A	6329	genome.wustl.edu	37	17	62034786	62034786	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000334.4	-1	reviewed	p.T704	0.999	46	0%	49	55.1%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN4A	6329	genome.wustl.edu	37	17	62049829	62049829	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000334.4	-1	reviewed	p.T92I	1.000	44	0%	44	31.8%	0	-	benign(0.189)	deleterious(0.02)	neutral(0.401)	superfamily_Voltage-gated potassium channels
ICAM2	3384	genome.wustl.edu	37	17	62082590	62082590	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000873.3	-1	reviewed	p.L69	0.000	79	0%	70	38.6%	8	50%	-	-	-	HMMPfam_ICAM_N,superfamily_Immunoglobulin
ERN1	2081	genome.wustl.edu	37	17	62133038	62133038	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001433.3	-1	reviewed	p.G557*	0.096	39	0%	21	52.4%	4	25%	-	-	-	superfamily_Protein kinase-like (PK-like)
ERN1	2081	genome.wustl.edu	37	17	62133166	62133166	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001433.3	-1	reviewed	p.S514Y	0.003	16	0%	11	36.4%	6	66.6%	benign(0.063)	deleterious(0.04)	neutral(0.353)	NULL
TEX2	55852	genome.wustl.edu	37	17	62228280	62228280	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018469.3	-1	validated	p.R1068Q	1.000	308	0%	195	15.9%	16	12.5%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	NULL
TEX2	55852	genome.wustl.edu	37	17	62248512	62248512	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018469.3	-1	validated	p.G880	0.006	96	0%	74	35.1%	15	53.3%	-	-	-	HMMPfam_DUF2404
TEX2	55852	genome.wustl.edu	37	17	62271118	62271118	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018469.3	-1	validated	p.K659N	0.440	98	0%	51	41.2%	9	66.6%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMSmart_PH
POLG2	11232	genome.wustl.edu	37	17	62492922	62492922	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007215.3	-1	reviewed	p.E55	0.941	28	0%	22	40.9%	7	57.1%	-	-	-	NULL
SMURF2	64750	genome.wustl.edu	37	17	62543722	62543722	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022739.3	-1	validated	p.L689	0.987	116	0%	106	39.6%	32	28.1%	-	-	-	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
SMURF2	64750	genome.wustl.edu	37	17	62543726	62543726	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022739.3	-1	validated	p.A688G	1.000	120	0%	112	53.6%	30	63.3%	probably_damaging(0.996)	tolerated(0.07)	deleterious(0.780)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
SMURF2	64750	genome.wustl.edu	37	17	62579636	62579636	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022739.3	-1	validated	p.G171E	1.000	457	0%	226	45.6%	14	42.8%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMPfam_WW,HMMSmart_WW,superfamily_WW_Rsp5_WWP
APOH	350	genome.wustl.edu	37	17	64216726	64216726	+	Missense_Mutation	SNP	C	C	A	rs112244796		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000042.2	-1	reviewed	p.D184Y	1.000	241	0.4%	123	50.4%	0	-	possibly_damaging(0.947)	deleterious(0.02)	deleterious(0.774)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
CACNG5	27091	genome.wustl.edu	37	17	64880864	64880864	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014404.1	+1	reviewed	p.D219G	0.002	50	0%	40	25%	0	-	unknown(0)	tolerated(0.61)	-	NULL
HELZ	9931	genome.wustl.edu	37	17	65104791	65104791	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014877.3	-1	validated	p.R1514Q	0.255	88	0%	67	50.7%	20	55%	unknown(0)	deleterious(0)	-	NULL
HELZ	9931	genome.wustl.edu	37	17	65132273	65132273	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014877.3	-1	validated	p.R999	1.000	161	0%	51	47.1%	9	22.2%	-	-	-	superfamily_SSF52540
PSMD12	5718	genome.wustl.edu	37	17	65337163	65337163	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002816.3	-1	reviewed	p.S389	0.976	179	0%	105	41.9%	35	45.7%	-	-	-	HMMPfam_PCI,HMMSmart_PINT,superfamily_SSF46785
PSMD12	5718	genome.wustl.edu	37	17	65344741	65344741	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002816.3	-1	reviewed	p.L145	1.000	331	0%	227	43.6%	31	45.1%	-	-	-	NULL
PITPNC1	26207	genome.wustl.edu	37	17	65688752	65688752	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012417.2	+1	reviewed	p.I249	0.525	169	0.6%	93	46.2%	49	44.8%	-	-	-	NULL
NOL11	25926	genome.wustl.edu	37	17	65722751	65722751	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015462.3	+1	provisional	p.L280	0.000	81	0%	51	49%	17	70.5%	-	-	-	NULL
BPTF	2186	genome.wustl.edu	37	17	65889741	65889741	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182641.3	+1	reviewed	p.G771R	1.000	154	0%	79	46.8%	6	16.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
BPTF	2186	genome.wustl.edu	37	17	65941526	65941526	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000321866	+1	known	p.V32A	0.998	33	0%	30	20%	34	8.8%	unknown(0)	deleterious(0)	-	NULL
BPTF	2186	genome.wustl.edu	37	17	65941840	65941840	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182641.3	+1	reviewed	p.S2339F	1.000	190	0%	138	42.8%	29	27.5%	probably_damaging(0.965)	tolerated(0.06)	deleterious(0.730)	NULL
BPTF	2186	genome.wustl.edu	37	17	65942403	65942403	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182641.3	+1	reviewed	p.L2527I	1.000	24	0%	10	80%	9	33.3%	probably_damaging(0.996)	tolerated(0.2)	deleterious(0.511)	NULL
BPTF	2186	genome.wustl.edu	37	17	65944273	65944273	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182641.3	+1	reviewed	p.R2593W	1.000	232	0%	113	54.9%	19	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BPTF	2186	genome.wustl.edu	37	17	65960371	65960371	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182641.3	+1	reviewed	p.R2769C	1.000	128	0%	89	50.6%	13	61.5%	possibly_damaging(0.871)	deleterious(0)	deleterious(0.783)	HMMSmart_PHD,superfamily_FYVE_PHD_ZnF,PatternScan_ZF_PHD_1,HMMPfam_PHD
KPNA2	3838	genome.wustl.edu	37	17	66039322	66039322	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002266.2	+1	reviewed	p.R258Q	0.999	218	0%	171	45.6%	204	44.6%	benign(0.054)	tolerated(0.4)	neutral(0.019)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
SLC16A6	9120	genome.wustl.edu	37	17	66268842	66268842	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004694.4	-1	validated	p.R148H	1.000	179	0%	92	44.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
ARSG	22901	genome.wustl.edu	37	17	66343007	66343007	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000448504	+1	known	p.R20Q	0.000	10	0.000	7	0.571	0	-	benign(0.032)	-	-	NULL
ARSG	22901	genome.wustl.edu	37	17	66343289	66343289	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014960.3	+1	validated	p.G144S	0.992	281	0%	184	45.7%	3	0%	probably_damaging(0.966)	tolerated(0.32)	neutral(0.432)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
ARSG	22901	genome.wustl.edu	37	17	66381255	66381255	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014960.3	+1	validated	p.A345S	0.904	38	0%	31	35.5%	0	-	benign(0.218)	tolerated(0.07)	neutral(0.341)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
ARSG	22901	genome.wustl.edu	37	17	66397520	66397520	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014960.3	+1	validated	p.S411I	0.993	78	0%	40	52.5%	1	0%	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
PRKAR1A	5573	genome.wustl.edu	37	17	66511583	66511583	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002734.3	+1	reviewed	p.L15F	1.000	62	0%	46	45.7%	40	32.5%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
ABCA8	10351	genome.wustl.edu	37	17	66872637	66872637	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007168.2	-1	reviewed	p.S1405L	0.126	69	0%	47	42.6%	0	-	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA8	10351	genome.wustl.edu	37	17	66925366	66925366	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007168.2	-1	reviewed	p.A317T	0.002	25	0%	16	50%	0	-	benign(0.045)	tolerated(0.21)	neutral(0.046)	NULL
ABCA6	23460	genome.wustl.edu	37	17	67119451	67119451	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080284.2	-1	reviewed	p.I455	0.000	336	0.3%	73	45.2%	0	-	-	-	-	NULL
ABCA6	23460	genome.wustl.edu	37	17	67132350	67132350	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080284.2	-1	reviewed	p.E115K	0.000	404	0%	134	42.5%	0	-	benign(0.001)	tolerated(0.21)	neutral(0.044)	NULL
ABCA10	10349	genome.wustl.edu	37	17	67215735	67215735	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080282.3	-1	reviewed	p.K161Q	0.000	157	0%	58	46.6%	0	-	benign(0.058)	tolerated(0.13)	neutral(0.256)	NULL
ABCA5	23461	genome.wustl.edu	37	17	67247938	67247938	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018672.3	-1	reviewed	p.E1495D	1.000	155	0%	59	62.7%	6	83.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA5	23461	genome.wustl.edu	37	17	67252412	67252412	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018672.3	-1	reviewed	p.T1248	0.001	336	0%	115	38.3%	6	83.3%	-	-	-	NULL
ABCA5	23461	genome.wustl.edu	37	17	67300881	67300881	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018672.3	-1	reviewed	p.A287S	1.000	194	0%	64	40.6%	1	100%	benign(0)	tolerated(1)	-	NULL
ABCA5	23461	genome.wustl.edu	37	17	67310457	67310457	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018672.3	-1	reviewed	p.Q34*	1.000	278	0%	77	42.9%	0	-	-	-	-	NULL
MAP2K6	5608	genome.wustl.edu	37	17	67515455	67515455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002758.3	+1	reviewed	p.R83Q	1.000	63	0%	55	29.1%	17	17.6%	probably_damaging(0.962)	tolerated(0.34)	neutral(0.428)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
KCNJ2	3759	genome.wustl.edu	37	17	68171214	68171214	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000891.2	+1	reviewed	p.V12I	1.000	26	0%	20	95%	0	-	possibly_damaging(0.866)	deleterious(0.01)	deleterious(0.741)	HMMPfam_IRK_N
SDK2	54549	genome.wustl.edu	37	17	71334930	71334930	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144952.1	-1	provisional	p.S2105	1.000	103	0%	115	39.1%	3	0%	-	-	-	NULL
SDK2	54549	genome.wustl.edu	37	17	71431698	71431698	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000416616	-1	known	p.R267W	0.467	6	0.000	14	0.357	1	0%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
DNAI2	64446	genome.wustl.edu	37	17	72306193	72306193	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023036.4	+1	reviewed	p.D462A	1.000	13	0.000	5	0.800	0	-	benign(0.124)	tolerated(0.28)	neutral(0.042)	HMMSmart_SM00320,superfamily_WD40 repeat-like
LOC100289576	100289576	genome.wustl.edu	37	17	72440074	72440074	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343581.1	-1	model	p.R48Q	0.000	48	0%	58	43.1%	0	-	-	-	-	NULL
CD300E	342510	genome.wustl.edu	37	17	72613293	72613293	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181449.1	-1	provisional	p.D118N	0.005	47	0%	23	47.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00409
CD300E	342510	genome.wustl.edu	37	17	72613493	72613493	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181449.1	-1	provisional	p.R51Q	0.014	67	0%	52	46.2%	0	-	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
CD300LF	146722	genome.wustl.edu	37	17	72691347	72691347	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139018.3	-1	validated	p.L254S	0.001	39	0%	26	61.5%	0	-	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	NULL
OTOP2	92736	genome.wustl.edu	37	17	72926474	72926474	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178160.2	+1	validated	p.I248	0.780	19	5.3%	24	45.8%	0	-	-	-	-	NULL
OTOP2	92736	genome.wustl.edu	37	17	72929580	72929580	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178160.2	+1	validated	p.F543	0.996	32	0%	35	45.7%	0	-	-	-	-	HMMPfam_DUF270
OTOP3	347741	genome.wustl.edu	37	17	72939429	72939429	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178233.1	+1	provisional	p.N226Y	1.000	69	0%	52	40.4%	0	-	possibly_damaging(0.882)	deleterious(0.02)	deleterious(0.728)	NULL
NUP85	79902	genome.wustl.edu	37	17	73228951	73228951	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024844.3	+1	reviewed	p.S468G	1.000	80	0%	80	45%	56	39.2%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	HMMPfam_Nucleopor_Nup85
MIF4GD	57409	genome.wustl.edu	37	17	73265484	73265484	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020679.2	-1	validated	p.R43M	0.004	107	0%	79	41.8%	2	50%	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_MIF4G
LLGL2	3993	genome.wustl.edu	37	17	73567105	73567105	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031803.1	+1	reviewed	p.I700	0.092	5	0.000	9	0.556	48	45.8%	-	-	-	NULL
RECQL5	9400	genome.wustl.edu	37	17	73627084	73627084	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004259.5	-1	validated	p.D519Y	0.932	42	0%	29	37.9%	9	66.6%	benign(0.367)	deleterious(0.02)	deleterious(0.499)	NULL
ITGB4	3691	genome.wustl.edu	37	17	73753305	73753305	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000213.3	+1	reviewed	p.R1748H	0.013	14	0%	20	25%	88	45.4%	benign(0)	tolerated(1)	-	NULL
ACOX1	51	genome.wustl.edu	37	17	73945864	73945864	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004035.6	-1	reviewed	p.W471*	1.000	96	0%	60	40%	18	5.5%	-	-	-	NULL
EVPL	2125	genome.wustl.edu	37	17	74004806	74004806	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001988.2	-1	validated	p.E1494K	0.127	66	0%	68	32.4%	19	47.3%	possibly_damaging(0.452)	tolerated(0.95)	neutral(0.148)	NULL
EXOC7	23265	genome.wustl.edu	37	17	74080636	74080636	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145297.2	-1	validated	p.A631T	0.002	109	0.9%	88	40.9%	35	22.8%	benign(0)	tolerated(0.64)	neutral(0.003)	HMMPfam_Exo70
RNF157	114804	genome.wustl.edu	37	17	74155423	74155423	+	Missense_Mutation	SNP	G	G	T	rs187993129	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052916.2	-1	validated	p.L433I	0.998	30	0%	24	54.2%	0	-	benign(0.005)	tolerated(0.34)	neutral(0.023)	NULL
ENSG00000207169	0	genome.wustl.edu	37	17	74333483	74333483	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384440	+1	novel	NULL	0.017	336	0%	103	28.2%	0	-	-	-	-	-
UBE2O	63893	genome.wustl.edu	37	17	74387194	74387194	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022066.3	-1	validated	p.R1237W	1.000	50	0%	41	41.5%	40	65%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
UBE2O	63893	genome.wustl.edu	37	17	74395996	74395996	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022066.3	-1	validated	p.R388C	0.992	44	0%	33	51.5%	16	43.7%	probably_damaging(0.988)	deleterious(0.05)	deleterious(0.783)	NULL
UBE2O	63893	genome.wustl.edu	37	17	74397108	74397108	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022066.3	-1	validated	p.R293Q	0.998	12	0%	21	42.9%	25	48%	probably_damaging(0.994)	tolerated(0.28)	deleterious(0.484)	NULL
RHBDF2	79651	genome.wustl.edu	37	17	74467978	74467978	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024599.3	-1	validated	p.N770D	1.000	32	0%	33	18.2%	39	10.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Rhomboid
ST6GALNAC1	55808	genome.wustl.edu	37	17	74621490	74621490	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018414.3	-1	validated	p.V575	0.995	78	0%	67	40.3%	7	57.1%	-	-	-	HMMPfam_Glyco_transf_29
MXRA7	439921	genome.wustl.edu	37	17	74681240	74681240	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008528.1	-1	validated	p.G138	0.726	108	0%	117	33.3%	46	58.6%	-	-	-	NULL
JMJD6	23210	genome.wustl.edu	37	17	74721549	74721549	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081461.1	-1	reviewed	p.R173M	1.000	76	0%	69	49.3%	13	15.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00558,superfamily_Clavaminate synthase-like
MGAT5B	146664	genome.wustl.edu	37	17	74942507	74942507	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198955.1	+1	validated	p.R642Q	1.000	12	0%	15	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MGAT5B	146664	genome.wustl.edu	37	17	74944027	74944027	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198955.1	+1	validated	p.P689H	0.002	7	0.000	10	0.800	0	-	possibly_damaging(0.781)	deleterious(0.01)	deleterious(0.698)	NULL
TMC8	147138	genome.wustl.edu	37	17	76134663	76134663	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152468.4	+1	reviewed	p.S558Y	0.999	27	0%	23	52.2%	2	0%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
PGS1	9489	genome.wustl.edu	37	17	76420263	76420263	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000335081	+1	known	p.V281M	0.042	14	0%	20	40%	15	60%	-	-	-	NULL
DNAH17	8632	genome.wustl.edu	37	17	76492030	76492030	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000389840	-1	known	p.G1930S	1.000	108	0%	87	36.8%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH17	8632	genome.wustl.edu	37	17	76521126	76521126	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000389840	-1	known	p.R1273C	0.023	30	0%	26	42.3%	0	-	benign(0.045)	tolerated(0.09)	neutral(0.299)	HMMPfam_DHC_N2
DNAH17	8632	genome.wustl.edu	37	17	76556997	76556997	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000389840	-1	known	p.A619V	1.000	15	0%	19	36.8%	0	-	benign(0.01)	tolerated(0.59)	neutral(0.005)	HMMPfam_DHC_N1
DNAH17	8632	genome.wustl.edu	37	17	76562711	76562711	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000389840	-1	known	p.I518	0.003	89	0%	55	43.6%	0	-	-	-	-	HMMPfam_DHC_N1
USP36	57602	genome.wustl.edu	37	17	76798596	76798596	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025090.3	-1	validated	p.G944	0.000	8	0.000	17	0.529	18	22.2%	-	-	-	NULL
USP36	57602	genome.wustl.edu	37	17	76809946	76809946	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025090.3	-1	validated	p.G392*	1.000	80	0%	53	52.8%	12	16.6%	-	-	-	HMMPfam_UCH,superfamily_SSF54001
USP36	57602	genome.wustl.edu	37	17	76817087	76817087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025090.3	-1	validated	p.A272T	0.999	21	0%	22	36.4%	17	23.5%	benign(0.149)	tolerated(0.27)	neutral(0.046)	HMMPfam_UCH,superfamily_SSF54001
LGALS3BP	3959	genome.wustl.edu	37	17	76967788	76967788	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005567.3	-1	reviewed	p.A543V	0.001	15	0%	19	36.8%	158	19.6%	benign(0)	tolerated(1)	-	NULL
RBFOX3	146713	genome.wustl.edu	37	17	77102825	77102825	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001082575.1	-1	validated	p.S90P	0.995	25	0%	30	33.3%	1	0%	benign(0)	deleterious(0.04)	neutral(0.349)	NULL
CBX8	57332	genome.wustl.edu	37	17	77768908	77768908	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020649.2	-1	validated	p.D232	0.925	11	0%	15	46.7%	10	60%	-	-	-	NULL
SLC26A11	284129	genome.wustl.edu	37	17	78196512	78196512	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173626.3	+1	reviewed	p.R98Q	1.000	77	0%	68	54.4%	14	57.1%	possibly_damaging(0.741)	deleterious(0.01)	deleterious(0.677)	PatternScan_SLC26A
RNF213	57674	genome.wustl.edu	37	17	78247195	78247195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020954.2	+1	validated	p.V85I	0.000	35	0%	28	42.9%	2	0%	unknown(0)	tolerated(0.48)	-	NULL
RNF213	57674	genome.wustl.edu	37	17	78268742	78268742	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020954.2	+1	validated	p.Q565	0.343	48	0%	45	42.2%	9	11.1%	-	-	-	NULL
RNF213	57674	genome.wustl.edu	37	17	78316973	78316973	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508628	+1	known	p.M2011V	0.000	95	0%	68	44.1%	3	100%	benign(0.004)	tolerated(0.09)	neutral(0.296)	NULL
RNF213	57674	genome.wustl.edu	37	17	78327411	78327411	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508628	+1	known	p.E3508A	0.396	62	0%	43	51.2%	17	23.5%	benign(0.004)	deleterious(0.01)	neutral(0.406)	NULL
RNF213	57674	genome.wustl.edu	37	17	78332206	78332206	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508628	+1	known	p.A3661T	0.656	97	0%	68	19.1%	14	28.5%	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
RNF213	57674	genome.wustl.edu	37	17	78345690	78345690	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508628	+1	known	p.D4148Y	0.004	389	0%	171	38.6%	5	20%	possibly_damaging(0.644)	deleterious(0.01)	deleterious(0.631)	NULL
RNF213	57674	genome.wustl.edu	37	17	78355365	78355365	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508628	+1	known	p.K4606E	1.000	69	0%	45	24.4%	12	16.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
RNF213	57674	genome.wustl.edu	37	17	78359417	78359417	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508628	+1	known	p.T4845	0.646	69	0%	44	47.7%	26	30.7%	-	-	-	NULL
RNF213	57674	genome.wustl.edu	37	17	78363145	78363145	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508628	+1	known	p.D5058G	0.011	65	1.5%	44	36.4%	23	26%	benign(0.01)	tolerated(0.11)	neutral(0.272)	NULL
ENSG00000173818	0	genome.wustl.edu	37	17	78409990	78409990	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000397538	+1	known	p.R64W	0.045	63	0%	82	35.4%	21	38%	-	-	-	NULL
NPTX1	4884	genome.wustl.edu	37	17	78449360	78449360	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002522.3	-1	reviewed	p.I201	0.997	19	0%	16	50%	4	50%	-	-	-	NULL
NPTX1	4884	genome.wustl.edu	37	17	78449474	78449474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002522.3	-1	reviewed	p.K163N	1.000	23	0%	16	25%	0	-	probably_damaging(0.956)	tolerated(0.1)	deleterious(0.686)	NULL
RPTOR	57521	genome.wustl.edu	37	17	78938085	78938085	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020761.2	+1	reviewed	p.N1321	1.000	18	0%	36	52.8%	23	52.1%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
CHMP6	79643	genome.wustl.edu	37	17	78970842	78970842	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024591.4	+1	validated	p.D128	0.818	23	0%	32	37.5%	23	21.7%	-	-	-	HMMPfam_Snf7
BAIAP2	10458	genome.wustl.edu	37	17	79031759	79031759	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017451.2	+1	reviewed	p.K70T	1.000	12	0%	15	53.3%	17	35.2%	possibly_damaging(0.841)	tolerated(0.17)	neutral(0.381)	HMMPfam_IMD
BAIAP2	10458	genome.wustl.edu	37	17	79059300	79059300	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000435091	+1	known	p.C43	0.000	15	0%	24	54.2%	0	-	-	-	-	HMMPfam_IMD
MIR1250	100302229	genome.wustl.edu	37	17	79107022	79107022	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000408098	-1	known	NULL	0.006	12	0%	17	41.2%	0	-	-	-	-	-
SLC38A10	124565	genome.wustl.edu	37	17	79226430	79226430	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037984.1	-1	validated	p.D504N	0.998	14	0%	15	33.3%	75	36%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
LINC00482	284185	genome.wustl.edu	37	17	79278782	79278782	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178519.2	-1	predicted	p.R128Q	0.001	14	0%	19	42.1%	0	-	unknown(0)	-	-	NULL
BAHCC1	57597	genome.wustl.edu	37	17	79405436	79405436	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080519.2	+1	inferred	p.L78I	1.000	38	0%	40	37.5%	0	-	-	-	-	NULL
HGS	9146	genome.wustl.edu	37	17	79663463	79663463	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004712.3	+1	provisional	p.E490D	1.000	10	0%	11	90.9%	74	58.1%	benign(0.382)	tolerated(0.11)	neutral(0.394)	NULL
SLC25A10	1468	genome.wustl.edu	37	17	79683845	79683845	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012140.3	+1	provisional	p.Y141	0.916	18	0%	26	34.6%	84	36.9%	-	-	-	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
ARHGDIA	396	genome.wustl.edu	37	17	79827052	79827052	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004309.4	-1	validated	p.K138E	1.000	22	0%	22	50%	411	40.6%	possibly_damaging(0.473)	tolerated(0.08)	neutral(0.456)	HMMPfam_Rho_GDI,superfamily_E set domains
SIRT7	51547	genome.wustl.edu	37	17	79870453	79870453	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016538.1	-1	reviewed	p.R348C	0.998	27	0%	39	41%	13	23%	benign(0.048)	tolerated(0.19)	neutral(0.053)	NULL
PYCR1	5831	genome.wustl.edu	37	17	79893354	79893354	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006907.2	-1	reviewed	p.T59	0.105	30	0%	35	57.1%	280	51.4%	-	-	-	HMMPfam_F420_oxidored,superfamily_NAD(P)-binding Rossmann-fold domains
GPS1	2873	genome.wustl.edu	37	17	80014227	80014227	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_212492.1	+1	reviewed	p.S372F	1.000	44	0%	42	40.5%	196	45.4%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PCI
FASN	2194	genome.wustl.edu	37	17	80042435	80042435	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004104.4	-1	reviewed	p.R1574	0.190	5	0.000	22	0.682	106	50%	-	-	-	superfamily_GroES-like
FASN	2194	genome.wustl.edu	37	17	80053328	80053328	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004104.4	-1	reviewed	p.R50W	0.990	10	0%	12	58.3%	40	45%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ketoacyl-synt,superfamily_Thiolase-like
CCDC57	284001	genome.wustl.edu	37	17	80086462	80086462	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000419322	-1	known	p.C209R	0.000	46	0%	49	22.4%	12	16.6%	-	-	-	NULL
CSNK1D	1453	genome.wustl.edu	37	17	80209365	80209365	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001893.3	-1	reviewed	p.R259C	1.000	69	0%	60	30%	89	30.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
CD7	924	genome.wustl.edu	37	17	80273270	80273270	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006137.6	-1	reviewed	p.A217V	0.000	22	0%	24	54.2%	21	4.7%	possibly_damaging(0.86)	tolerated(0.1)	deleterious(0.619)	NULL
SECTM1	6398	genome.wustl.edu	37	17	80282696	80282696	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003004.2	-1	reviewed	p.C55	0.301	42	0%	36	38.9%	22	68.1%	-	-	-	NULL
NARF	26502	genome.wustl.edu	37	17	80422166	80422166	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012336.3	+1	reviewed	p.G38*	0.998	105	0%	69	44.9%	65	30.7%	-	-	-	NULL
NARF	26502	genome.wustl.edu	37	17	80436788	80436788	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012336.3	+1	reviewed	p.R211S	0.883	28	0%	24	29.2%	35	22.8%	benign(0.402)	tolerated(0.47)	neutral(0.140)	HMMPfam_Fe_hyd_lg_C,superfamily_Fe-only hydrogenase
FOXK2	3607	genome.wustl.edu	37	17	80529646	80529646	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004514.3	+1	reviewed	p.A270V	1.000	69	0%	44	36.4%	22	54.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	"HMMPfam_Fork_head,HMMSmart_SM00339,PatternScan_FORK_HEAD_1,superfamily_""Winged helix"" DNA-binding domain"
FOXK2	3607	genome.wustl.edu	37	17	80559219	80559219	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000335241	+1	known	p.R317C	0.000	33	0%	25	48%	60	50%	probably_damaging(0.985)	-	-	HMMPfam_Fork_head,HMMSmart_FH
USP14	9097	genome.wustl.edu	37	18	178938	178938	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005151.3	+1	reviewed	p.M67I	1.000	55	0%	22	40.9%	27	59.2%	benign(0.002)	tolerated(0.48)	neutral(0.011)	HMMSmart_UBQ,superfamily_SSF54236
COLEC12	81035	genome.wustl.edu	37	18	321740	321740	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130386.2	-1	validated	p.L711	0.324	228	0.4%	130	48.5%	2	50%	-	-	-	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1
COLEC12	81035	genome.wustl.edu	37	18	347255	347255	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130386.2	-1	validated	p.R123C	0.960	183	0%	108	91.7%	1	0%	unknown(0)	-	-	NULL
ENOSF1	55556	genome.wustl.edu	37	18	690588	690588	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_202758.2	-1	validated	p.S214	0.953	49	0%	23	52.2%	45	44.4%	-	-	-	superfamily_SSF51604
YES1	7525	genome.wustl.edu	37	18	743000	743000	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005433.3	-1	reviewed	p.K326N	0.985	375	0%	148	54.1%	28	32.1%	possibly_damaging(0.933)	tolerated(0.06)	deleterious(0.702)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
METTL4	64863	genome.wustl.edu	37	18	2566950	2566950	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022840.3	-1	validated	p.R89Q	1.000	220	0%	150	40.7%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NDC80	10403	genome.wustl.edu	37	18	2590030	2590030	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006101.2	+1	validated	p.S295L	0.999	136	0%	63	41.3%	18	33.3%	benign(0.389)	tolerated(0.13)	neutral(0.377)	NULL
SMCHD1	23347	genome.wustl.edu	37	18	2700764	2700764	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015295.2	+1	validated	p.G499W	1.000	249	0%	108	45.4%	7	42.8%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
LPIN2	9663	genome.wustl.edu	37	18	2925345	2925345	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014646.2	-1	reviewed	p.S605	0.017	53	0%	47	48.9%	20	70%	-	-	-	NULL
MYOM1	8736	genome.wustl.edu	37	18	3067331	3067331	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003803.3	-1	reviewed	p.V1663M	1.000	36	0%	26	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MYOM1	8736	genome.wustl.edu	37	18	3067448	3067448	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003803.3	-1	reviewed	p.E1624K	1.000	47	0%	41	48.8%	1	0%	possibly_damaging(0.898)	tolerated(0.12)	deleterious(0.615)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MYOM1	8736	genome.wustl.edu	37	18	3119951	3119951	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003803.3	-1	reviewed	p.A1012T	0.998	43	0%	30	30%	2	0%	benign(0.064)	tolerated(0.17)	neutral(0.063)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
MYOM1	8736	genome.wustl.edu	37	18	3154948	3154948	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003803.3	-1	reviewed	p.D547A	1.000	140	0%	62	46.8%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
MYOM1	8736	genome.wustl.edu	37	18	3215058	3215058	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003803.3	-1	reviewed	p.R55H	1.000	13	0%	14	35.7%	0	-	benign(0.265)	tolerated(0.15)	neutral(0.269)	NULL
TGIF1	7050	genome.wustl.edu	37	18	3457449	3457449	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170695.2	+1	reviewed	p.I239M	1.000	62	0%	50	48%	91	49.4%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	superfamily_Homeodomain-like
ZFP161	7541	genome.wustl.edu	37	18	5291429	5291429	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143823.1	-1	validated	p.A260T	0.000	65	0%	58	53.4%	11	36.3%	benign(0.001)	tolerated(0.87)	neutral(0.001)	NULL
ZFP161	7541	genome.wustl.edu	37	18	5291968	5291968	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143823.1	-1	validated	p.F80C	1.000	210	0%	94	45.7%	4	50%	probably_damaging(0.999)	tolerated(0.09)	deleterious(0.787)	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB
EPB41L3	23136	genome.wustl.edu	37	18	5396298	5396298	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012307.2	-1	provisional	p.G959C	1.000	279	0%	183	41.5%	1	0%	possibly_damaging(0.686)	deleterious(0)	deleterious(0.690)	NULL
EPB41L3	23136	genome.wustl.edu	37	18	5428400	5428400	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012307.2	-1	provisional	p.R326Q	1.000	169	0%	114	36%	2	0%	possibly_damaging(0.811)	deleterious(0.04)	deleterious(0.654)	HMMPfam_FERM_C,superfamily_PH domain-like
EPB41L3	23136	genome.wustl.edu	37	18	5433984	5433984	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012307.2	-1	provisional	p.D248N	1.000	204	0%	151	52.3%	1	0%	benign(0.02)	tolerated(0.35)	neutral(0.022)	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
TMEM200C	645369	genome.wustl.edu	37	18	5891825	5891825	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080209.1	-1	provisional	p.G80R	0.000	25	0%	29	55.2%	0	-	possibly_damaging(0.462)	deleterious(0.04)	deleterious(0.500)	HMMPfam_DUF2371
TMEM200C	645369	genome.wustl.edu	37	18	5891897	5891897	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080209.1	-1	provisional	p.A56T	1.000	41	0%	60	40%	1	0%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_DUF2371
LAMA1	284217	genome.wustl.edu	37	18	6982510	6982510	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005559.2	-1	validated	p.S1959I	0.006	64	0%	55	49.1%	2	100%	possibly_damaging(0.91)	tolerated(0.12)	deleterious(0.623)	superfamily_Concanavalin A-like lectins/glucanases
LAMA1	284217	genome.wustl.edu	37	18	7040194	7040194	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005559.2	-1	validated	p.G435*	1.000	200	0%	99	14.1%	1	0%	-	-	-	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin
LAMA1	284217	genome.wustl.edu	37	18	7043389	7043389	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005559.2	-1	validated	p.N331T	1.000	204	0%	132	42.4%	0	-	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_Laminin_EGF,HMMSmart_SM00180,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin
LRRC30	339291	genome.wustl.edu	37	18	7231661	7231661	+	Silent	SNP	C	C	T	rs191436455	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105581.1	+1	provisional	p.F175	0.000	34	0%	19	36.8%	0	-	-	-	-	superfamily_SSF52058
PTPRM	5797	genome.wustl.edu	37	18	8376502	8376502	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105244.1	+1	reviewed	p.I1123	1.000	78	0%	53	45.3%	8	12.5%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRM	5797	genome.wustl.edu	37	18	8378374	8378374	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105244.1	+1	reviewed	p.P1192S	1.000	109	0%	87	32.2%	5	40%	probably_damaging(0.999)	tolerated(0.36)	deleterious(0.510)	superfamily_(Phosphotyrosine protein) phosphatases II
ANKRD12	23253	genome.wustl.edu	37	18	9256726	9256726	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015208.3	+1	validated	p.K1154T	1.000	61	0%	23	69.6%	4	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_Ankyrin repeat
PPP4R1	9989	genome.wustl.edu	37	18	9577165	9577165	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042388.1	-1	validated	p.L315M	1.000	283	0%	118	49.2%	6	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HEAT,superfamily_ARM repeat
RAB31	11031	genome.wustl.edu	37	18	9859257	9859257	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006868.3	+1	validated	p.N175H	1.000	75	0%	63	42.9%	12	0%	benign(0.374)	tolerated(0.12)	neutral(0.380)	HMMSmart_SM00176,superfamily_P-loop containing nucleoside triphosphate hydrolases
VAPA	9218	genome.wustl.edu	37	18	9936179	9936179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003574.5	+1	reviewed	p.A102D	1.000	365	0%	159	18.2%	87	19.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Motile_Sperm,superfamily_PapD-like
VAPA	9218	genome.wustl.edu	37	18	9950415	9950415	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003574.5	+1	reviewed	p.A192	1.000	165	0%	78	44.9%	124	47.5%	-	-	-	NULL
PIEZO2	63895	genome.wustl.edu	37	18	10680295	10680295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000503781	-1	known	p.S399Y	1.000	467	0%	178	42.1%	0	-	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	NULL
ENSG00000175388	0	genome.wustl.edu	37	18	10759509	10759509	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000383408	-1	known	p.I506S	0.987	126	0%	75	46.7%	0	-	benign(0.428)	tolerated(0.39)	neutral(0.155)	NULL
ENSG00000175388	0	genome.wustl.edu	37	18	10763065	10763065	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000383408	-1	known	p.S256Y	1.000	81	0%	63	39.7%	0	-	benign(0.303)	deleterious(0.04)	neutral(0.443)	NULL
ENSG00000168738	0	genome.wustl.edu	37	18	10871307	10871307	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000302079	-1	known	p.K18Q	1.000	197	0%	72	52.8%	0	-	probably_damaging(0.978)	deleterious(0.02)	deleterious(0.803)	NULL
LOC729602	729602	genome.wustl.edu	37	18	11625764	11625764	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344140.1	-1	model	p.R61M	0.008	207	0%	128	47.7%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_NPIP
GNAL	2774	genome.wustl.edu	37	18	11872284	11872284	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182978.2	+1	validated	p.S350Y	1.000	155	0%	88	45.5%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_G-alpha,superfamily_SSF52540
CIDEA	1149	genome.wustl.edu	37	18	12262855	12262855	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198289.2	+1	reviewed	p.R58*	0.000	35	0%	28	25%	0	-	-	-	-	superfamily_SSF54277
TUBB6	84617	genome.wustl.edu	37	18	12325692	12325692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032525.1	+1	provisional	p.A302T	1.000	22	0%	28	39.3%	52	30.7%	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	superfamily_Tub_FtsZ_C,HMMPfam_Tubulin_C
SPIRE1	56907	genome.wustl.edu	37	18	12506495	12506495	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128626.1	-1	validated	p.Y318C	1.000	202	0%	105	12.4%	17	29.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SPIRE1	56907	genome.wustl.edu	37	18	12506637	12506637	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128626.1	-1	validated	p.R271*	0.996	164	1.2%	86	44.2%	11	0%	-	-	-	NULL
CEP192	55125	genome.wustl.edu	37	18	13015346	13015346	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000506447	+1	known	p.G180E	0.026	372	0%	118	49.2%	2	50%	possibly_damaging(0.938)	tolerated(0.51)	neutral(0.393)	NULL
CEP192	55125	genome.wustl.edu	37	18	13059101	13059101	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032142.3	+1	validated	p.R830	1.000	114	0%	60	53.3%	5	40%	-	-	-	NULL
C18orf1	753	genome.wustl.edu	37	18	13438380	13438380	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181481.3	+1	validated	p.N60D	1.000	53	0%	37	27%	3	66.6%	benign(0.011)	tolerated(0.44)	neutral(0.013)	NULL
FAM210A	125228	genome.wustl.edu	37	18	13681662	13681662	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098801.1	-1	validated	p.P139S	1.000	205	0%	96	41.7%	13	23%	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	HMMPfam_DUF1279
RNMT	8731	genome.wustl.edu	37	18	13737011	13737011	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003799.1	+1	provisional	p.E186*	1.000	325	0.3%	155	38.7%	4	50%	-	-	-	HMMPfam_Pox_MCEL,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
MC5R	4161	genome.wustl.edu	37	18	13826284	13826284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005913.1	+1	provisional	p.G174S	1.000	64	0%	57	49.1%	0	-	possibly_damaging(0.747)	tolerated(0.98)	neutral(0.274)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
MC5R	4161	genome.wustl.edu	37	18	13826634	13826634	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005913.1	+1	provisional	p.M290I	0.559	148	0%	149	43.6%	0	-	benign(0)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZNF519	162655	genome.wustl.edu	37	18	14105779	14105779	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145287.3	-1	validated	p.G254*	0.004	156	0%	54	44.4%	1	0%	-	-	-	NULL
NF1P5	4768	genome.wustl.edu	37	18	14156148	14156148	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418350	-1	known	p.S117Y	0.040	17	0.000	8	0.750	0	-	-	-	-	NULL
ANKRD30B	374860	genome.wustl.edu	37	18	14752901	14752901	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145029.1	+1	validated	p.Y134D	0.000	189	0%	104	33.7%	0	-	benign(0.006)	tolerated(0.13)	neutral(0.253)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ANKRD30B	374860	genome.wustl.edu	37	18	14777983	14777983	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145029.1	+1	validated	e10-1	0.013	261	0%	119	37%	0	-	-	-	-	-
ANKRD30B	374860	genome.wustl.edu	37	18	14797816	14797816	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145029.1	+1	validated	p.K664N	0.018	588	0%	215	43.3%	0	-	probably_damaging(0.976)	tolerated(0.05)	deleterious(0.763)	NULL
ANKRD30B	374860	genome.wustl.edu	37	18	14852113	14852113	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145029.1	+1	validated	p.T1271	0.550	165	0%	80	46.3%	0	-	-	-	-	NULL
ANKRD30B	374860	genome.wustl.edu	37	18	14852378	14852378	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145029.1	+1	validated	p.E1360*	0.585	48	0%	18	38.9%	0	-	-	-	-	NULL
ROCK1	6093	genome.wustl.edu	37	18	18564314	18564314	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005406.2	-1	reviewed	p.T829	0.998	435	0%	174	46.6%	11	45.4%	-	-	-	NULL
GREB1L	80000	genome.wustl.edu	37	18	19076502	19076502	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142966.1	+1	provisional	p.C1078	1.000	44	0%	47	40.4%	2	50%	-	-	-	NULL
ESCO1	114799	genome.wustl.edu	37	18	19116045	19116045	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052911.2	-1	validated	p.D715	1.000	302	0%	112	45.5%	8	50%	-	-	-	NULL
ESCO1	114799	genome.wustl.edu	37	18	19153714	19153714	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052911.2	-1	validated	p.R364H	1.000	541	0.2%	232	38.4%	9	22.2%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
ABHD3	171586	genome.wustl.edu	37	18	19239234	19239234	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138340.4	-1	reviewed	p.V247I	1.000	117	0%	67	44.8%	20	55%	benign(0.103)	tolerated(0.1)	neutral(0.294)	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases
CTAGE1	64693	genome.wustl.edu	37	18	19996832	19996832	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172241.2	-1	validated	p.K315E	0.633	253	0%	118	40.7%	0	-	possibly_damaging(0.532)	tolerated(0.24)	neutral(0.217)	NULL
RBBP8	5932	genome.wustl.edu	37	18	20573581	20573581	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002894.2	+1	reviewed	p.E597D	0.686	87	0%	50	40%	21	33.3%	benign(0.056)	deleterious(0.01)	neutral(0.409)	NULL
TMEM241	85019	genome.wustl.edu	37	18	20877985	20877985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032933.4	-1	validated	p.R293W	0.127	47	0%	52	28.8%	16	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Multidrug resistance efflux transporter EmrE
RIOK3	8780	genome.wustl.edu	37	18	21042949	21042949	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003831.3	+1	reviewed	p.N29H	1.000	222	0%	124	42.7%	8	50%	benign(0.075)	tolerated(0.12)	neutral(0.266)	NULL
RIOK3	8780	genome.wustl.edu	37	18	21046199	21046199	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003831.3	+1	reviewed	p.R216*	1.000	192	0%	93	41.9%	10	50%	-	-	-	NULL
RIOK3	8780	genome.wustl.edu	37	18	21059320	21059320	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003831.3	+1	reviewed	p.R462*	0.995	231	0%	116	45.7%	7	14.2%	-	-	-	HMMSmart_SM00090,superfamily_Protein kinase-like (PK-like),HMMPfam_RIO1
C18orf8	29919	genome.wustl.edu	37	18	21104436	21104436	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013326.3	+1	validated	p.S350	0.716	298	0%	162	53.1%	23	34.7%	-	-	-	NULL
LAMA3	3909	genome.wustl.edu	37	18	21327917	21327917	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198129.1	+1	reviewed	p.V153G	1.000	292	0%	134	39.6%	1	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Laminin_N,HMMSmart_SM00136,superfamily_Galactose-binding domain-like
LAMA3	3909	genome.wustl.edu	37	18	21395184	21395184	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198129.1	+1	reviewed	p.G641*	1.000	208	0%	123	42.3%	1	0%	-	-	-	HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin
LAMA3	3909	genome.wustl.edu	37	18	21413944	21413944	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198129.1	+1	reviewed	p.C992	1.000	70	0%	42	47.6%	0	-	-	-	-	NULL
LAMA3	3909	genome.wustl.edu	37	18	21444783	21444783	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198129.1	+1	reviewed	p.A1540V	0.059	184	0%	90	48.9%	1	100%	benign(0)	tolerated(0.54)	neutral(0.007)	HMMPfam_Laminin_B,HMMSmart_SM00281
TTC39C	125488	genome.wustl.edu	37	18	21698106	21698106	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135993.1	+1	validated	p.E366*	1.000	246	0%	115	54.8%	3	0%	-	-	-	HMMPfam_Deme6,superfamily_TPR-like
CABYR	26256	genome.wustl.edu	37	18	21736349	21736349	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012189.2	+1	reviewed	p.S295F	0.461	94	0%	66	45.5%	7	42.8%	unknown(0)	deleterious(0)	-	NULL
CABYR	26256	genome.wustl.edu	37	18	21739844	21739844	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000399496	+1	known	p.P317H	1.000	175	0%	89	41.6%	29	31%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
HRH4	59340	genome.wustl.edu	37	18	22040841	22040841	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021624.3	+1	reviewed	p.S50I	1.000	548	0%	195	37.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
HRH4	59340	genome.wustl.edu	37	18	22056924	22056924	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021624.3	+1	reviewed	p.A191T	0.466	283	0%	153	38.6%	0	-	benign(0.023)	tolerated(0.92)	neutral(0.001)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZNF521	25925	genome.wustl.edu	37	18	22804328	22804328	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015461.2	-1	validated	p.S1185N	1.000	114	0%	53	49.1%	37	40.5%	possibly_damaging(0.84)	tolerated(0.18)	neutral(0.378)	NULL
AQP4	361	genome.wustl.edu	37	18	24440789	24440789	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001650.4	-1	reviewed	p.P214S	1.000	155	0%	82	41.5%	0	-	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMPfam_MIP,superfamily_Aquaporin-like
CHST9	83539	genome.wustl.edu	37	18	24497206	24497206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031422.4	-1	validated	p.G117W	0.000	507	0%	126	15.1%	4	0%	benign(0.159)	deleterious(0.01)	neutral(0.420)	NULL
CDH2	1000	genome.wustl.edu	37	18	25568547	25568547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001792.3	-1	reviewed	p.R561Q	1.000	523	0%	193	43%	2	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DSC3	1825	genome.wustl.edu	37	18	28588256	28588256	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001941.3	-1	reviewed	p.N500T	0.504	266	0%	86	45.3%	1	100%	benign(0)	tolerated(1)	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DSC3	1825	genome.wustl.edu	37	18	28588469	28588469	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001941.3	-1	reviewed	p.R429H	0.000	230	0%	85	41.2%	2	50%	benign(0.016)	tolerated(0.09)	neutral(0.297)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DSC2	1824	genome.wustl.edu	37	18	28650745	28650745	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024422.3	-1	reviewed	p.A733T	0.997	521	0.2%	170	38.8%	57	52.6%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	NULL
DSC2	1824	genome.wustl.edu	37	18	28666645	28666645	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024422.3	-1	reviewed	p.R279H	0.007	216	0%	95	50.5%	40	45%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DSC1	1823	genome.wustl.edu	37	18	28710559	28710559	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024421.2	-1	reviewed	p.R868Q	0.135	253	0%	101	43.6%	0	-	benign(0.131)	tolerated(0.37)	neutral(0.030)	NULL
DSC1	1823	genome.wustl.edu	37	18	28723697	28723697	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024421.2	-1	reviewed	p.G333S	1.000	292	0.3%	121	38%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DSG3	1830	genome.wustl.edu	37	18	29041235	29041235	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001944.2	+1	reviewed	p.R287*	0.708	309	0%	86	43%	0	-	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin
DSG3	1830	genome.wustl.edu	37	18	29049058	29049058	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001944.2	+1	reviewed	p.S548L	0.124	36	0%	22	54.5%	1	100%	possibly_damaging(0.889)	deleterious(0.01)	deleterious(0.755)	superfamily_Cadherin
DSG3	1830	genome.wustl.edu	37	18	29056053	29056053	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001944.2	+1	reviewed	p.V944M	0.000	138	0%	115	40.9%	1	100%	possibly_damaging(0.508)	tolerated(0.24)	neutral(0.208)	NULL
B4GALT6	9331	genome.wustl.edu	37	18	29207071	29207071	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004775.3	-1	reviewed	p.E264*	1.000	215	0%	111	42.3%	2	100%	-	-	-	HMMPfam_Galactosyl_T_2,superfamily_SSF53448
MCART2	147407	genome.wustl.edu	37	18	29340254	29340254	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001034172.2	-1	validated	p.A124V	0.997	155	1.3%	120	45.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
MEP1B	4225	genome.wustl.edu	37	18	29784213	29784213	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005925.2	+1	validated	p.R146Q	1.000	193	0%	121	43%	0	-	possibly_damaging(0.945)	tolerated(0.35)	neutral(0.410)	"HMMPfam_Astacin,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain"
MEP1B	4225	genome.wustl.edu	37	18	29790487	29790487	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005925.2	+1	validated	p.D315N	0.008	371	0%	170	36.5%	0	-	benign(0)	tolerated(1)	-	HMMPfam_MAM,HMMSmart_SM00137,PatternScan_MAM_1
FAM59A	64762	genome.wustl.edu	37	18	29848728	29848728	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022751.1	-1	provisional	p.I578	0.225	57	0%	38	36.8%	4	50%	-	-	-	NULL
KLHL14	57565	genome.wustl.edu	37	18	30257271	30257271	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020805.1	-1	provisional	p.M537I	1.000	115	0%	21	38.1%	18	38.8%	possibly_damaging(0.612)	tolerated(0.09)	deleterious(0.508)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
C18orf34	374864	genome.wustl.edu	37	18	30825319	30825319	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105528.1	-1	validated	p.L495I	0.005	688	0%	150	41.3%	0	-	probably_damaging(0.981)	tolerated(0.29)	neutral(0.455)	NULL
C18orf34	374864	genome.wustl.edu	37	18	30926304	30926304	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105528.1	-1	validated	p.L177I	0.998	228	0%	120	50%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
ASXL3	80816	genome.wustl.edu	37	18	31314301	31314301	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030632.1	+1	provisional	p.R335Q	1.000	306	0%	67	38.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ASXL3	80816	genome.wustl.edu	37	18	31318887	31318887	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030632.1	+1	provisional	p.D507Y	1.000	154	0%	51	51%	0	-	possibly_damaging(0.887)	deleterious(0)	deleterious(0.791)	NULL
NOL4	8715	genome.wustl.edu	37	18	31538275	31538275	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003787.3	-1	validated	p.H388	0.995	181	0%	56	33.9%	0	-	-	-	-	NULL
NOL4	8715	genome.wustl.edu	37	18	31599388	31599388	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003787.3	-1	validated	p.S317L	0.998	306	0%	108	45.4%	0	-	probably_damaging(0.99)	deleterious(0.04)	deleterious(0.790)	NULL
DTNA	1837	genome.wustl.edu	37	18	32374065	32374065	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001390.4	+1	reviewed	p.D71	1.000	131	0%	52	44.2%	0	-	-	-	-	HMMPfam_efhand_1,superfamily_EF-hand
ZNF396	252884	genome.wustl.edu	37	18	32954062	32954062	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145756.2	-1	validated	p.G65	0.644	44	0%	47	46.8%	4	75%	-	-	-	HMMPfam_SCAN,HMMSmart_SM00431
GALNT1	2589	genome.wustl.edu	37	18	33234725	33234725	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020474.3	+1	reviewed	p.K33N	1.000	275	0%	77	40.3%	26	65.3%	benign(0.001)	tolerated(0.14)	neutral(0.249)	NULL
GALNT1	2589	genome.wustl.edu	37	18	33271052	33271052	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020474.3	+1	reviewed	p.Y352C	1.000	196	0%	64	32.8%	62	43.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Nucleotide-diphospho-sugar transferases
RPRD1A	55197	genome.wustl.edu	37	18	33613743	33613743	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018170.3	-1	provisional	p.S70I	1.000	439	0%	166	33.1%	36	52.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00582,HMMPfam_DUF618,superfamily_ENTH/VHS domain
SLC39A6	25800	genome.wustl.edu	37	18	33689570	33689570	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012319.3	-1	validated	p.R752C	1.000	175	0%	60	60%	24	0%	possibly_damaging(0.795)	deleterious(0.04)	deleterious(0.647)	NULL
SLC39A6	25800	genome.wustl.edu	37	18	33696637	33696637	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012319.3	-1	validated	p.R489*	1.000	516	0%	262	39.7%	48	4.1%	-	-	-	HMMPfam_Zip
ELP2	55250	genome.wustl.edu	37	18	33740924	33740924	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018255.1	+1	provisional	p.V573A	1.000	327	0%	130	17.7%	47	19.1%	possibly_damaging(0.744)	deleterious(0.01)	deleterious(0.679)	HMMSmart_SM00320,superfamily_WD40 repeat-like
FHOD3	80206	genome.wustl.edu	37	18	34174854	34174854	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025135.2	+1	validated	p.T237	0.569	79	0%	53	45.3%	3	100%	-	-	-	NULL
FHOD3	80206	genome.wustl.edu	37	18	34289113	34289113	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025135.2	+1	validated	p.G589	0.188	28	0%	13	46.2%	1	100%	-	-	-	NULL
FHOD3	80206	genome.wustl.edu	37	18	34289125	34289125	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025135.2	+1	validated	p.V593	0.000	22	0%	12	41.7%	4	75%	-	-	-	NULL
KIAA1328	57536	genome.wustl.edu	37	18	34740278	34740278	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020776.1	+1	validated	p.H450N	0.999	130	0%	60	40%	3	33.3%	benign(0.121)	tolerated(0.61)	neutral(0.013)	NULL
CELF4	56853	genome.wustl.edu	37	18	34833784	34833784	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020180.3	-1	reviewed	p.R484H	1.000	9	0.000	17	0.412	2	50%	benign(0.004)	deleterious(0.04)	neutral(0.349)	NULL
CELF4	56853	genome.wustl.edu	37	18	34853091	34853091	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020180.3	-1	reviewed	p.V279	0.996	10	0%	14	28.6%	0	-	-	-	-	NULL
PIK3C3	5289	genome.wustl.edu	37	18	39617750	39617750	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002647.2	+1	validated	p.Q645R	1.000	305	0%	96	40.6%	15	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,superfamily_Kinase_like,PatternScan_PI3_4_KINASE_1
EPG5	57724	genome.wustl.edu	37	18	43487983	43487983	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020964.2	-1	validated	p.I1423	1.000	392	0%	127	37.8%	4	75%	-	-	-	NULL
ATP5A1	498	genome.wustl.edu	37	18	43671784	43671784	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001937.1	-1	reviewed	p.R58H	1.000	113	0%	71	15.5%	437	12.1%	possibly_damaging(0.525)	deleterious(0)	deleterious(0.621)	superfamily_N-terminal domain of alpha and beta subunits of F1 ATP synthase
HAUS1	115106	genome.wustl.edu	37	18	43708098	43708098	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026978.1	+1	validated	NULL	0.909	349	0%	118	35.6%	39	41%	-	-	-	-
LOXHD1	125336	genome.wustl.edu	37	18	44143112	44143112	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144612.6	-1	reviewed	p.I560	1.000	61	0%	32	43.8%	0	-	-	-	-	HMMPfam_PLAT,superfamily_Lipase_LipOase
LOXHD1	125336	genome.wustl.edu	37	18	44236935	44236935	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441551	-1	known	p.S1	0.999	60	0%	72	37.5%	0	-	unknown(0)	tolerated(0.22)	-	NULL
ST8SIA5	29906	genome.wustl.edu	37	18	44260323	44260323	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013305.4	-1	reviewed	p.P271	1.000	17	0%	17	41.2%	0	-	-	-	-	HMMPfam_Glyco_transf_29
TCEB3B	51224	genome.wustl.edu	37	18	44560359	44560359	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016427.2	-1	reviewed	p.S426L	0.000	90	0%	63	39.7%	0	-	possibly_damaging(0.916)	deleterious(0.01)	deleterious(0.772)	NULL
KATNAL2	83473	genome.wustl.edu	37	18	44595943	44595943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031303.2	+1	validated	p.W255L	1.000	180	0%	50	42%	4	75%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_AAA,HMMPfam_AAA,superfamily_SSF52540
CTIF	9811	genome.wustl.edu	37	18	46238023	46238023	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142397.1	+1	validated	p.A181T	0.885	78	0%	60	38.3%	14	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CTIF	9811	genome.wustl.edu	37	18	46385846	46385846	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142397.1	+1	validated	p.I573	1.000	21	0%	11	36.4%	18	22.2%	-	-	-	HMMPfam_MIF4G,HMMSmart_MIF4G,superfamily_ARM-type_fold
SMAD7	4092	genome.wustl.edu	37	18	46448093	46448093	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005904.2	-1	provisional	p.V310	1.000	26	0%	30	36.7%	12	41.6%	-	-	-	HMMPfam_MH2,HMMSmart_DWB,superfamily_SMAD_FHA
LIPG	9388	genome.wustl.edu	37	18	47107934	47107934	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006033.2	+1	reviewed	p.R315C	1.000	57	0%	48	43.8%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
MYO5B	4645	genome.wustl.edu	37	18	47364001	47364001	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080467.2	-1	reviewed	p.P1675H	1.000	82	0%	42	9.5%	15	13.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MYO5B	4645	genome.wustl.edu	37	18	47365602	47365602	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080467.2	-1	reviewed	p.T1588	0.115	133	0%	67	47.8%	10	90%	-	-	-	NULL
MYO5B	4645	genome.wustl.edu	37	18	47518752	47518752	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080467.2	-1	reviewed	p.G221D	1.000	124	0%	64	14.1%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO5B	4645	genome.wustl.edu	37	18	47518778	47518778	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080467.2	-1	reviewed	p.T212	0.373	103	0%	58	44.8%	3	100%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
CCDC11	220136	genome.wustl.edu	37	18	47769289	47769289	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145020.3	-1	validated	p.K398	0.997	387	0%	228	19.7%	0	-	-	-	-	NULL
CCDC11	220136	genome.wustl.edu	37	18	47777148	47777148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145020.3	-1	validated	p.D326Y	0.999	387	0%	280	46.1%	0	-	probably_damaging(0.99)	tolerated(0.05)	deleterious(0.787)	NULL
CCDC11	220136	genome.wustl.edu	37	18	47778123	47778123	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145020.3	-1	validated	p.L169	0.003	113	0%	91	42.9%	1	100%	-	-	-	NULL
MBD1	4152	genome.wustl.edu	37	18	47806314	47806314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015846.3	-1	reviewed	p.R17C	1.000	22	0%	29	27.6%	28	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MBD,HMMSmart_SM00391,superfamily_DNA-binding domain
LOC100287130	100287130	genome.wustl.edu	37	18	47809005	47809005	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343599.1	+1	model	p.V69M	0.996	14	0%	26	53.8%	189	32.8%	-	-	-	NULL
CXXC1	30827	genome.wustl.edu	37	18	47813958	47813958	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101654.1	-1	validated	p.M1R	0.977	44	0%	48	39.6%	24	20.8%	benign(0.019)	deleterious(0)	neutral(0.446)	NULL
MRO	83876	genome.wustl.edu	37	18	48335756	48335756	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031939.3	-1	reviewed	p.Q5	0.022	171	0%	103	57.3%	0	-	-	-	-	NULL
ME2	4200	genome.wustl.edu	37	18	48452221	48452221	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002396.4	+1	reviewed	p.T423A	1.000	108	0%	53	26.4%	28	35.7%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	HMMPfam_Malic_M,superfamily_NAD(P)-bd
DCC	1630	genome.wustl.edu	37	18	50432609	50432609	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005215.3	+1	reviewed	p.Q203R	1.000	101	0%	40	50%	0	-	benign(0.403)	tolerated(0.52)	neutral(0.138)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
DCC	1630	genome.wustl.edu	37	18	50592491	50592491	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005215.3	+1	reviewed	p.A406T	1.000	248	0%	82	40.2%	0	-	possibly_damaging(0.897)	deleterious(0.05)	deleterious(0.700)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
DCC	1630	genome.wustl.edu	37	18	50976939	50976939	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005215.3	+1	reviewed	p.V1100A	1.000	86	0%	48	50%	0	-	probably_damaging(0.989)	deleterious(0.02)	deleterious(0.823)	HMMPfam_Neogenin_C
POLI	11201	genome.wustl.edu	37	18	51804084	51804084	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007195.2	+1	validated	p.E140*	1.000	441	0%	148	38.5%	3	0%	-	-	-	HMMPfam_IMS,superfamily_DNA/RNA polymerases
POLI	11201	genome.wustl.edu	37	18	51820532	51820532	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007195.2	+1	validated	p.E640*	1.000	100	0%	31	41.9%	18	55.5%	-	-	-	NULL
STARD6	147323	genome.wustl.edu	37	18	51863545	51863545	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139171.1	-1	provisional	p.T73A	0.234	500	0%	271	40.2%	0	-	benign(0.073)	tolerated(0.45)	neutral(0.017)	HMMPfam_START,HMMSmart_START,superfamily_SSF55961
TCF4	6925	genome.wustl.edu	37	18	53017619	53017619	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001083962.1	-1	reviewed	p.R174*	1.000	316	0.6%	86	39.5%	7	14.2%	-	-	-	NULL
WDR7	23335	genome.wustl.edu	37	18	54361938	54361938	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015285.2	+1	reviewed	p.R352K	1.000	504	0%	195	43.1%	0	-	benign(0.004)	tolerated(0.25)	neutral(0.037)	superfamily_Prolyl oligopeptidase N-terminal domain
WDR7	23335	genome.wustl.edu	37	18	54424066	54424066	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015285.2	+1	reviewed	p.E748*	1.000	139	0%	69	53.6%	1	0%	-	-	-	NULL
ST8SIA3	51046	genome.wustl.edu	37	18	55024271	55024271	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015879.2	+1	validated	p.F144V	1.000	200	0%	116	44%	0	-	benign(0.122)	deleterious(0.02)	neutral(0.393)	HMMPfam_Glyco_transf_29
ST8SIA3	51046	genome.wustl.edu	37	18	55027345	55027345	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015879.2	+1	validated	p.D327G	1.000	173	0%	91	40.7%	0	-	benign(0.024)	deleterious(0.01)	neutral(0.407)	HMMPfam_Glyco_transf_29
ONECUT2	9480	genome.wustl.edu	37	18	55143919	55143919	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000481727	+1	known	p.L122F	0.914	18	0%	22	40.9%	1	0%	-	-	-	superfamily_Homeodomain-like
FECH	2235	genome.wustl.edu	37	18	55238663	55238663	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012515.2	-1	reviewed	p.G148S	1.000	84	0%	61	52.5%	31	51.6%	benign(0.009)	tolerated(0.66)	neutral(0.003)	HMMPfam_Ferrochelatase,superfamily_Chelatase
NARS	4677	genome.wustl.edu	37	18	55276654	55276654	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004539.3	-1	validated	p.L172I	0.803	192	0%	96	45.8%	144	53.4%	benign(0)	tolerated(0.12)	neutral(0.261)	HMMPfam_tRNA_anti,superfamily_Nucleic_acid_OB
NEDD4L	23327	genome.wustl.edu	37	18	56010162	56010162	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144967.1	+1	validated	p.R468W	0.997	102	0%	61	41%	22	36.3%	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	NULL
NEDD4L	23327	genome.wustl.edu	37	18	56033295	56033295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144967.1	+1	validated	p.R633Q	1.000	402	0%	192	45.3%	10	20%	probably_damaging(1)	tolerated(0.2)	deleterious(0.549)	superfamily_Hect E3 ligase catalytic domain
RAX	30062	genome.wustl.edu	37	18	56939701	56939701	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013435.2	-1	reviewed	p.T145	0.469	31	0%	30	36.7%	2	0%	-	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
LMAN1	3998	genome.wustl.edu	37	18	57006090	57006090	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005570.3	-1	reviewed	p.Q351*	1.000	284	0%	104	36.5%	35	8.5%	-	-	-	NULL
LMAN1	3998	genome.wustl.edu	37	18	57016432	57016432	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005570.3	-1	reviewed	p.D226Y	1.000	366	0%	144	44.4%	23	91.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Lectin_leg-like,superfamily_ConA_like_lec_gl
CCBE1	147372	genome.wustl.edu	37	18	57106989	57106989	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133459.3	-1	reviewed	p.P279S	1.000	32	0%	25	48%	0	-	probably_damaging(0.998)	-	-	HMMPfam_Collagen
CDH20	28316	genome.wustl.edu	37	18	59195238	59195238	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031891.2	+1	reviewed	p.K352N	1.000	135	0%	75	42.7%	0	-	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
RNF152	220441	genome.wustl.edu	37	18	59483687	59483687	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173557.2	-1	validated	p.L4	0.810	5	0.000	6	0.667	8	37.5%	-	-	-	NULL
PIGN	23556	genome.wustl.edu	37	18	59742036	59742036	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012327.5	-1	reviewed	p.L865	0.637	234	0.4%	75	45.3%	10	50%	-	-	-	HMMPfam_PigN
PIGN	23556	genome.wustl.edu	37	18	59774319	59774319	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012327.5	-1	reviewed	e15-1	1.000	192	0%	61	26.2%	0	-	-	-	-	-
PIGN	23556	genome.wustl.edu	37	18	59780478	59780478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012327.5	-1	reviewed	p.F441L	0.998	290	0%	89	39.3%	8	50%	benign(0)	tolerated(1)	-	HMMPfam_PigN
PIGN	23556	genome.wustl.edu	37	18	59815502	59815502	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012327.5	-1	reviewed	p.F207L	1.000	154	0%	51	35.3%	7	71.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Alkaline_phosphatase_core
KIAA1468	57614	genome.wustl.edu	37	18	59928878	59928878	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020854.3	+1	validated	p.V779	1.000	146	0%	37	18.9%	11	0%	-	-	-	superfamily_ARM repeat
ZCCHC2	54877	genome.wustl.edu	37	18	60207020	60207020	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017742.4	+1	validated	p.R349Q	1.000	109	0%	72	45.8%	3	33.3%	benign(0.131)	deleterious(0.05)	neutral(0.356)	superfamily_PX
ZCCHC2	54877	genome.wustl.edu	37	18	60242256	60242256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017742.4	+1	validated	p.A981V	0.998	38	0%	36	38.9%	8	25%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
PHLPP1	23239	genome.wustl.edu	37	18	60646139	60646139	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194449.2	+1	validated	p.N1031	0.746	21	0%	28	35.7%	23	73.9%	-	-	-	NULL
PHLPP1	23239	genome.wustl.edu	37	18	60646314	60646314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194449.2	+1	validated	p.D1090N	0.999	16	0%	15	26.7%	23	47.8%	benign(0.005)	tolerated(0.19)	neutral(0.050)	NULL
KDSR	2531	genome.wustl.edu	37	18	61002517	61002517	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002035.2	-1	reviewed	p.V284	0.121	42	0%	40	30%	32	71.8%	-	-	-	superfamily_NAD(P)-binding Rossmann-fold domains
KDSR	2531	genome.wustl.edu	37	18	61022495	61022495	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002035.2	-1	reviewed	p.N120I	1.000	232	0%	139	51.1%	23	52.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
SERPINB4	6318	genome.wustl.edu	37	18	61305070	61305070	+	Silent	SNP	G	G	A	rs184695104	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000413673	-1	known	p.S333L	0.000	210	0.5%	36	33.3%	0	-	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SERPINB4	6318	genome.wustl.edu	37	18	61308226	61308226	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002974.2	-1	validated	e4-1	1.000	441	0%	110	42.7%	0	-	-	-	-	-
HMSD	284293	genome.wustl.edu	37	18	61627536	61627536	+	Missense_Mutation	SNP	G	G	A	rs141010043	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123366.1	+1	validated	p.D123N	0.000	124	0%	47	42.6%	0	-	probably_damaging(0.974)	tolerated(0.06)	deleterious(0.738)	NULL
SERPINB8	5271	genome.wustl.edu	37	18	61654342	61654342	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002640.3	+1	validated	p.V319M	0.998	87	0%	60	56.7%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
CDH7	1005	genome.wustl.edu	37	18	63511227	63511227	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004361.2	+1	reviewed	p.S387	0.010	129	0%	46	50%	0	-	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
CDH19	28513	genome.wustl.edu	37	18	64172426	64172426	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021153.2	-1	reviewed	p.E648*	1.000	124	0%	36	47.2%	0	-	-	-	-	HMMPfam_Cadherin_C
RTTN	25914	genome.wustl.edu	37	18	67687988	67687988	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173630.3	-1	validated	p.V2006M	0.000	137	0%	27	85.2%	5	80%	benign(0.013)	tolerated(0.16)	neutral(0.060)	superfamily_ARM repeat
FAM69C	125704	genome.wustl.edu	37	18	72109206	72109206	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001044369.2	-1	validated	p.R341H	0.348	75	0%	36	77.8%	0	-	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	NULL
FAM69C	125704	genome.wustl.edu	37	18	72113983	72113983	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001044369.2	-1	validated	p.P245L	0.040	38	0%	23	91.3%	0	-	possibly_damaging(0.512)	tolerated(0.09)	neutral(0.468)	NULL
ZNF407	55628	genome.wustl.edu	37	18	72343003	72343003	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017757.2	+1	reviewed	p.N10Y	0.002	84	0%	37	35.1%	1	0%	possibly_damaging(0.821)	deleterious(0)	deleterious(0.755)	NULL
SALL3	27164	genome.wustl.edu	37	18	76754267	76754267	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_171999.2	+1	validated	p.R759H	1.000	13	0%	14	35.7%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SALL3	27164	genome.wustl.edu	37	18	76757282	76757282	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_171999.2	+1	validated	p.T1288M	1.000	19	0%	14	85.7%	0	-	probably_damaging(0.973)	tolerated(0.07)	deleterious(0.734)	NULL
ATP9B	374868	genome.wustl.edu	37	18	77097282	77097282	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198531.3	+1	validated	p.R706*	1.000	13	0%	10	100%	2	50%	-	-	-	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N
C2CD4C	126567	genome.wustl.edu	37	19	407211	407211	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136263.1	-1	validated	p.S384I	0.930	5	0.000	10	0.900	0	-	possibly_damaging(0.931)	deleterious(0.03)	deleterious(0.742)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
HCN2	610	genome.wustl.edu	37	19	603927	603927	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001194.3	+1	validated	p.R339H	1.000	8	0.000	9	0.444	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
POLRMT	5442	genome.wustl.edu	37	19	623481	623481	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005035.3	-1	reviewed	p.T421	0.000	4	0.000	13	0.615	41	39%	-	-	-	superfamily_SSF56672
PTBP1	5725	genome.wustl.edu	37	19	804205	804205	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002819.4	+1	reviewed	p.N95	1.000	33	0%	35	45.7%	256	43.3%	-	-	-	HMMSmart_RRM,superfamily_SSF54928
PTBP1	5725	genome.wustl.edu	37	19	810741	810741	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002819.4	+1	reviewed	p.A530V	1.000	42	0%	27	25.9%	321	22.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
LPPR3	79948	genome.wustl.edu	37	19	814709	814709	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024888.1	-1	provisional	p.A214T	1.000	4	0.000	17	0.706	0	-	probably_damaging(0.997)	tolerated(0.1)	deleterious(0.752)	HMMPfam_PAP2,HMMSmart_acidPPc,superfamily_AcPase_VanPerase
AZU1	566	genome.wustl.edu	37	19	830819	830819	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001700.3	+1	reviewed	p.R158C	0.000	9	0.000	9	0.556	0	-	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
MED16	10025	genome.wustl.edu	37	19	868892	868892	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000269814	-1	known	p.A726V	1.000	19	0%	23	60.9%	60	58.3%	unknown(0)	deleterious(0)	-	NULL
CNN2	1265	genome.wustl.edu	37	19	1031120	1031120	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004368.2	+1	reviewed	p.I38	0.834	23	0%	14	50%	133	41.3%	-	-	-	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
ABCA7	10347	genome.wustl.edu	37	19	1043410	1043410	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019112.3	+1	reviewed	p.L290M	0.970	13	0%	25	52%	16	43.7%	probably_damaging(0.988)	tolerated(0.21)	deleterious(0.481)	NULL
ABCA7	10347	genome.wustl.edu	37	19	1044698	1044698	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019112.3	+1	reviewed	p.H390	0.001	13	0%	15	53.3%	23	21.7%	-	-	-	NULL
CIRBP	1153	genome.wustl.edu	37	19	1270880	1270880	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_023312.1	+1	validated	NULL	0.027	47	0%	44	29.5%	12	41.6%	-	-	-	-
NDUFS7	374291	genome.wustl.edu	37	19	1389325	1389326	+	Frame_Shift_Del	DEL	CT	CT	-	rs66919466	byCluster;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000382445	+1	known	p.L206fs	0.653:0.689	-	-	-	-	-	-	-	-	-	NULL
TCF3	6929	genome.wustl.edu	37	19	1615287	1615287	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003200.2	-1	validated	p.R607*	1.000	9	0.000	15	0.267	90	41.1%	-	-	-	HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
ATP8B3	148229	genome.wustl.edu	37	19	1802601	1802601	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138813.2	-1	reviewed	p.F316	0.997	58	0%	71	43.7%	5	0%	-	-	-	HMMPfam_E1-E2_ATPase,superfamily_SSF81653
REXO1	57455	genome.wustl.edu	37	19	1816083	1816083	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000413153	-1	known	p.R226C	0.998	12	0%	13	30.8%	65	38.4%	-	-	-	NULL
REXO1	57455	genome.wustl.edu	37	19	1817244	1817244	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020695.3	-1	validated	p.G1059R	0.986	30	0%	31	25.8%	44	27.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00479,superfamily_Ribonuclease H-like
SCAMP4	113178	genome.wustl.edu	37	19	1918914	1918914	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_079834.2	+1	validated	p.A107V	1.000	84	0%	66	39.4%	86	48.8%	benign(0.3)	tolerated(1)	neutral(0.093)	HMMPfam_SCAMP
BTBD2	55643	genome.wustl.edu	37	19	1990752	1990752	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017797.3	-1	reviewed	p.A252T	1.000	20	0%	39	51.3%	221	47.9%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_BACK
MOB3A	126308	genome.wustl.edu	37	19	2076843	2076843	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130807.2	-1	validated	p.F197	0.996	9	0.000	12	0.500	41	41.4%	-	-	-	HMMPfam_Mob1_phocein,superfamily_Mob1_phocein
AP3D1	8943	genome.wustl.edu	37	19	2109110	2109110	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003938.5	-1	validated	p.K1087N	1.000	52	0%	45	48.9%	117	76.9%	unknown(0)	tolerated(0.24)	-	HMMPfam_BLVR
AP3D1	8943	genome.wustl.edu	37	19	2109871	2109871	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003938.5	-1	validated	e27+1	1.000	15	0%	15	46.7%	11	100%	-	-	-	-
AP3D1	8943	genome.wustl.edu	37	19	2115263	2115263	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003938.5	-1	validated	p.I768	0.320	10	0%	25	40%	72	9.7%	-	-	-	HMMPfam_BLVR
AP3D1	8943	genome.wustl.edu	37	19	2121758	2121758	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003938.5	-1	validated	p.R359Q	1.000	22	0%	21	47.6%	77	80.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Adaptin_N,superfamily_ARM repeat
AP3D1	8943	genome.wustl.edu	37	19	2123840	2123840	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003938.5	-1	validated	p.A299T	1.000	60	0%	33	12.1%	66	7.5%	possibly_damaging(0.95)	tolerated(0.08)	deleterious(0.694)	HMMPfam_Adaptin_N,superfamily_ARM repeat
DOT1L	84444	genome.wustl.edu	37	19	2193746	2193746	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032482.2	+1	validated	p.G184	0.938	56	0%	55	25.5%	26	23%	-	-	-	HMMPfam_DOT1,superfamily_SSF53335
DOT1L	84444	genome.wustl.edu	37	19	2211152	2211152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032482.2	+1	validated	p.R469Q	0.994	11	0%	19	47.4%	27	40.7%	benign(0.169)	tolerated(0.53)	neutral(0.023)	NULL
LMNB2	84823	genome.wustl.edu	37	19	2431783	2431783	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032737.2	-1	reviewed	p.E550K	0.996	16	0%	27	48.1%	49	75.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IF_tail,superfamily_SSF74853
DIRAS1	148252	genome.wustl.edu	37	19	2717401	2717401	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145173.3	-1	validated	p.A135V	0.996	9	0.000	15	0.400	0	-	benign(0.001)	deleterious(0.01)	neutral(0.406)	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540
SGTA	6449	genome.wustl.edu	37	19	2765248	2765248	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003021.3	-1	reviewed	p.A110T	0.998	75	0%	81	30.9%	69	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452
ZNF57	126295	genome.wustl.edu	37	19	2916112	2916112	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173480.2	+1	validated	p.S56Y	0.142	473	0%	300	47.3%	2	50%	possibly_damaging(0.931)	deleterious(0)	deleterious(0.822)	HMMSmart_SM00349
FZR1	51343	genome.wustl.edu	37	19	3525880	3525880	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136198.1	+1	validated	p.R28	0.420	9	0.000	9	0.444	52	42.3%	-	-	-	NULL
FZR1	51343	genome.wustl.edu	37	19	3530794	3530794	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136198.1	+1	validated	p.T220M	1.000	32	0%	29	48.3%	40	52.5%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMSmart_SM00320,superfamily_WD40 repeat-like
C19orf29	58509	genome.wustl.edu	37	19	3624141	3624141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080543.1	-1	validated	p.R63W	0.000	2	0.000	4	1.000	14	57.1%	unknown(0)	deleterious(0.02)	-	NULL
APBA3	9546	genome.wustl.edu	37	19	3759747	3759747	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004886.3	-1	reviewed	p.P172	0.465	5	0.000	9	0.667	12	75%	-	-	-	NULL
MATK	4145	genome.wustl.edu	37	19	3789303	3789303	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002378.3	-1	reviewed	p.R15W	0.008	38	0%	53	47.2%	0	-	unknown(0)	deleterious(0.02)	-	NULL
ATCAY	85300	genome.wustl.edu	37	19	3910806	3910806	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033064.4	+1	reviewed	p.R262Q	1.000	57	0%	66	37.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00516,superfamily_CRAL/TRIO domain
MAP2K2	5605	genome.wustl.edu	37	19	4097337	4097337	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030662.3	-1	reviewed	p.H308	0.998	25	0%	26	46.2%	192	47.9%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MAP2K2	5605	genome.wustl.edu	37	19	4101083	4101083	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030662.3	-1	reviewed	p.F213	0.996	22	0%	26	53.8%	146	45.2%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MAP2K2	5605	genome.wustl.edu	37	19	4117527	4117527	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030662.3	-1	reviewed	p.G65S	1.000	33	0%	35	45.7%	136	47.7%	benign(0.187)	deleterious(0.04)	neutral(0.366)	superfamily_Kinase_like
CREB3L3	84699	genome.wustl.edu	37	19	4168370	4168370	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032607.1	+1	provisional	p.K246T	1.000	58	0%	46	34.8%	0	-	possibly_damaging(0.926)	deleterious(0.01)	deleterious(0.780)	HMMSmart_SM00338,superfamily_A DNA-binding domain in eukaryotic transcription factors,HMMPfam_bZIP_1
CCDC94	55702	genome.wustl.edu	37	19	4267637	4267637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018074.4	+1	provisional	p.R242M	0.844	8	0.000	13	0.385	25	52%	benign(0.296)	tolerated(0.1)	neutral(0.378)	HMMPfam_DUF572
MPND	84954	genome.wustl.edu	37	19	4357325	4357325	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032868.4	+1	validated	p.P358S	1.000	6	0.000	7	0.571	30	43.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Mov34,superfamily_JAB1/MPN domain
MPND	84954	genome.wustl.edu	37	19	4359952	4359952	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032868.4	+1	validated	p.C457R	0.898	5	0.000	8	0.625	29	75.8%	benign(0.143)	tolerated(0.08)	neutral(0.312)	NULL
CHAF1A	10036	genome.wustl.edu	37	19	4429756	4429756	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005483.2	+1	validated	p.P609S	1.000	98	0%	74	54.1%	29	27.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
UBXN6	80700	genome.wustl.edu	37	19	4453935	4453935	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025241.2	-1	validated	p.R80Q	0.998	26	0%	21	38.1%	97	62.8%	possibly_damaging(0.727)	tolerated(0.4)	neutral(0.281)	NULL
HDGFRP2	84717	genome.wustl.edu	37	19	4491574	4491574	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001520.1	+1	reviewed	p.S167	0.000	18	0%	14	50%	82	48.7%	-	-	-	NULL
PLIN4	729359	genome.wustl.edu	37	19	4511413	4511413	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080400.1	-1	provisional	p.T839	0.005	61	0%	62	51.6%	0	-	-	-	-	NULL
PLIN4	729359	genome.wustl.edu	37	19	4512187	4512187	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080400.1	-1	provisional	p.T581	0.000	73	0%	73	17.8%	0	-	-	-	-	NULL
PLIN4	729359	genome.wustl.edu	37	19	4512197	4512197	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080400.1	-1	provisional	p.T578I	0.000	68	0%	65	47.7%	0	-	possibly_damaging(0.767)	deleterious(0.03)	deleterious(0.649)	NULL
SEMA6B	10501	genome.wustl.edu	37	19	4550182	4550182	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032108.2	-1	reviewed	p.A408	0.953	16	0%	20	45%	6	0%	-	-	-	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
DPP9	91039	genome.wustl.edu	37	19	4676624	4676624	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139159.4	-1	reviewed	p.G877	0.982	14	0%	22	45.5%	45	46.6%	-	-	-	HMMPfam_Peptidase_S9,superfamily_SSF53474
FEM1A	55527	genome.wustl.edu	37	19	4793565	4793565	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018708.2	+1	validated	p.L567M	1.000	19	0%	29	37.9%	33	39.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
TICAM1	148022	genome.wustl.edu	37	19	4817253	4817253	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182919.2	-1	validated	p.S379	0.000	46	0%	30	20%	15	6.6%	-	-	-	NULL
UHRF1	29128	genome.wustl.edu	37	19	4929426	4929426	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398240	+1	known	p.E129K	0.928	12	0%	19	47.4%	21	42.8%	benign(0.011)	tolerated(0.27)	neutral(0.034)	NULL
PTPRS	5802	genome.wustl.edu	37	19	5210574	5210574	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002850.3	-1	reviewed	p.R1798H	1.000	45	0%	43	48.8%	127	48.8%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRS	5802	genome.wustl.edu	37	19	5244326	5244326	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002850.3	-1	reviewed	p.R386C	0.976	60	0%	54	27.8%	28	57.1%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
SAFB2	9667	genome.wustl.edu	37	19	5598855	5598855	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014649.2	-1	validated	p.S577	0.019	157	0.6%	121	48.8%	36	41.6%	-	-	-	superfamily_SSF54928
SAFB	6294	genome.wustl.edu	37	19	5667401	5667401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002967.2	+1	reviewed	p.R831W	1.000	32	0%	19	57.9%	70	40%	unknown(0)	deleterious(0)	-	NULL
LONP1	9361	genome.wustl.edu	37	19	5707707	5707707	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004793.2	-1	reviewed	e6+1	1.000	11	0%	11	63.6%	2	50%	-	-	-	-
LONP1	9361	genome.wustl.edu	37	19	5711824	5711824	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004793.2	-1	reviewed	p.E276	1.000	9	0.000	12	0.500	77	68.8%	-	-	-	HMMPfam_LON,HMMSmart_LON
CATSPERD	257062	genome.wustl.edu	37	19	5744496	5744496	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152784.3	+1	validated	p.A211V	0.012	496	0%	271	45%	0	-	benign(0.234)	deleterious(0)	neutral(0.468)	NULL
FUT6	2528	genome.wustl.edu	37	19	5831769	5831769	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000150.2	-1	reviewed	p.P270	0.834	47	0%	57	38.6%	1	100%	-	-	-	HMMPfam_Glyco_transf_10
FUT6	2528	genome.wustl.edu	37	19	5832458	5832458	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000150.2	-1	reviewed	p.P41S	0.002	19	0%	21	42.9%	0	-	benign(0.136)	tolerated(0.32)	neutral(0.036)	HMMPfam_Glyco_transf_10
FUT3	2525	genome.wustl.edu	37	19	5844583	5844583	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000149.3	-1	reviewed	p.D90N	0.943	30	0%	22	50%	0	-	benign(0.312)	tolerated(0.47)	neutral(0.108)	HMMPfam_Glyco_transf_10
RANBP3	8498	genome.wustl.edu	37	19	5932507	5932507	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007322.2	-1	reviewed	p.P174L	1.000	20	0%	15	46.7%	51	45%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ACSBG2	81616	genome.wustl.edu	37	19	6185664	6185664	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030924.3	+1	validated	p.E514*	1.000	44	0%	36	38.9%	0	-	-	-	-	HMMPfam_AMP-binding,superfamily_SSF56801
MLLT1	4298	genome.wustl.edu	37	19	6222293	6222293	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005934.3	-1	validated	p.R317C	1.000	37	0%	39	35.9%	35	37.1%	unknown(0)	deleterious(0.04)	-	NULL
KHSRP	8570	genome.wustl.edu	37	19	6415546	6415546	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003685.2	-1	validated	p.I629	0.829	11	0%	26	46.2%	66	36.3%	-	-	-	HMMPfam_DUF1897
KHSRP	8570	genome.wustl.edu	37	19	6419267	6419267	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003685.2	-1	validated	p.S184	0.340	16	0%	30	53.3%	165	43.6%	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
TNFSF9	8744	genome.wustl.edu	37	19	6534730	6534730	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003811.3	+1	reviewed	p.V140I	0.000	17	0%	23	34.8%	2	0%	benign(0)	tolerated(0.29)	neutral(0.029)	HMMPfam_TNF,HMMSmart_TNF,PatternScan_TNF_1,superfamily_TNF_like
C3	718	genome.wustl.edu	37	19	6693007	6693007	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000064.2	-1	reviewed	p.W1106*	1.000	51	0%	48	35.4%	9	11.1%	-	-	-	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp
C3	718	genome.wustl.edu	37	19	6694573	6694573	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000064.2	-1	reviewed	p.S1008L	0.024	22	0%	18	22.2%	8	12.5%	possibly_damaging(0.698)	tolerated(0.12)	deleterious(0.512)	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN
EMR1	2015	genome.wustl.edu	37	19	6897470	6897470	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001974.3	+1	reviewed	p.C142	1.000	95	0%	57	52.6%	0	-	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
EMR4P	326342	genome.wustl.edu	37	19	6990799	6990799	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000359590	-1	known	p.R4K	0.268	54	0%	37	37.8%	0	-	-	-	-	NULL
INSR	3643	genome.wustl.edu	37	19	7122735	7122735	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000208.2	-1	reviewed	p.A1140V	1.000	76	0%	55	49.1%	10	20%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
INSR	3643	genome.wustl.edu	37	19	7174651	7174651	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000208.2	-1	reviewed	p.E356K	1.000	23	0%	19	57.9%	3	33.3%	benign(0)	tolerated(0.91)	-	superfamily_L domain-like
INSR	3643	genome.wustl.edu	37	19	7267569	7267569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000208.2	-1	reviewed	p.E147K	1.000	88	0%	71	43.7%	7	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Recep_L_domain,superfamily_L domain-like
ARHGEF18	23370	genome.wustl.edu	37	19	7524831	7524831	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130955.1	+1	reviewed	p.E613D	1.000	15	0%	10	50%	22	31.8%	possibly_damaging(0.818)	tolerated(0.18)	neutral(0.365)	NULL
XAB2	56949	genome.wustl.edu	37	19	7692636	7692636	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020196.2	-1	validated	p.R101M	1.000	43	0%	35	48.6%	47	36.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_HAT,superfamily_SSF48452
STXBP2	6813	genome.wustl.edu	37	19	7709503	7709503	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006949.2	+1	reviewed	p.L371	1.000	6	0.000	9	0.556	115	48.6%	-	-	-	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
LRRC8E	80131	genome.wustl.edu	37	19	7963575	7963575	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025061.3	+1	validated	p.P56	0.995	45	0%	32	15.6%	8	0%	-	-	-	NULL
FBN3	84467	genome.wustl.edu	37	19	8145995	8145995	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032447.3	-1	reviewed	p.E2449K	1.000	19	0%	24	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Growth factor receptor domain,HMMPfam_EGF_CA,PatternScan_EGF_CA
FBN3	84467	genome.wustl.edu	37	19	8152948	8152948	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032447.3	-1	reviewed	p.C2164	0.910	27	0%	27	40.7%	1	0%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA
FBN3	84467	genome.wustl.edu	37	19	8152969	8152969	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032447.3	-1	reviewed	p.E2157D	1.000	27	0%	28	17.9%	1	0%	probably_damaging(0.998)	tolerated(0.13)	deleterious(0.727)	HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin
FBN3	84467	genome.wustl.edu	37	19	8153004	8153004	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032447.3	-1	reviewed	p.G2146R	1.000	28	0%	34	55.9%	0	-	benign(0.392)	deleterious(0)	deleterious(0.570)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN3	84467	genome.wustl.edu	37	19	8162290	8162290	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032447.3	-1	reviewed	p.E1724*	1.000	17	0.000	7	0.714	1	100%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN3	84467	genome.wustl.edu	37	19	8207008	8207008	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032447.3	-1	reviewed	p.G185	0.795	10	0.000	9	0.556	0	-	-	-	-	superfamily_TB module/8-cys domain,superfamily_EGF/Laminin
MYO1F	4542	genome.wustl.edu	37	19	8595220	8595220	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012335.3	-1	validated	p.R730W	0.997	19	0%	19	63.2%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_TH1
MYO1F	4542	genome.wustl.edu	37	19	8595362	8595362	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012335.3	-1	validated	p.Y713	0.642	10	0%	20	35%	1	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO1F	4542	genome.wustl.edu	37	19	8618046	8618046	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012335.3	-1	validated	p.R161C	1.000	51	0%	48	10.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
ADAMTS10	81794	genome.wustl.edu	37	19	8661280	8661280	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030957.2	-1	reviewed	p.G367	0.656	19	0%	19	26.3%	3	0%	-	-	-	HMMPfam_Reprolysin,superfamily_SSF55486
ZNF558	148156	genome.wustl.edu	37	19	8933331	8933331	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144693.1	-1	provisional	p.A2V	0.094	27	0%	18	27.8%	3	66.6%	possibly_damaging(0.913)	deleterious(0)	deleterious(0.809)	NULL
MUC16	94025	genome.wustl.edu	37	19	9001855	9001855	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.P13465T	0.016	113	0%	66	53%	3	33.3%	probably_damaging(0.989)	tolerated(0.55)	neutral(0.447)	NULL
MUC16	94025	genome.wustl.edu	37	19	9012885	9012885	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.L12853	0.000	300	0%	173	37.6%	0	-	-	-	-	HMMPfam_SEA,HMMSmart_SM00200,superfamily_SEA domain
MUC16	94025	genome.wustl.edu	37	19	9024949	9024949	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.R12305C	0.001	116	0.9%	83	51.8%	1	100%	probably_damaging(0.989)	-	-	HMMPfam_SEA,HMMSmart_SM00200,superfamily_SEA domain
MUC16	94025	genome.wustl.edu	37	19	9056673	9056673	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.S10258I	0.003	60	0%	33	36.4%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9058224	9058224	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.P9741H	0.001	103	0%	55	38.2%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9058991	9058991	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.E9485	0.000	207	0%	83	43.4%	0	-	-	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9061629	9061629	+	Missense_Mutation	SNP	C	C	T	rs182118027	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.R8606H	0.000	246	0%	115	59.1%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9061732	9061732	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.S8572P	0.000	123	0%	51	49%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9067135	9067135	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.E6771K	0.000	206	0%	112	42.9%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9069196	9069196	+	Missense_Mutation	SNP	C	C	T	rs190236703	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.A6084T	0.000	110	0%	49	49%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9070134	9070134	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.R5771K	0.001	155	0%	95	36.8%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9071137	9071137	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.Q5437*	0.000	194	0%	126	55.6%	0	-	-	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9073462	9073462	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.A4662T	0.000	190	0%	78	50%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9075608	9075608	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.P3946	0.005	98	0%	43	27.9%	0	-	-	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9075899	9075899	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.T3849	0.000	277	0%	144	38.2%	0	-	-	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9082704	9082704	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.E3037D	0.024	101	0%	57	38.6%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9085325	9085325	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.T2164A	0.042	72	0%	43	34.9%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9090038	9090038	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024690.2	-1	validated	p.E593*	0.013	76	0%	29	44.8%	0	-	-	-	-	NULL
ZNF317	57693	genome.wustl.edu	37	19	9271677	9271677	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020933.3	+1	provisional	p.G452	0.988	38	0%	32	40.6%	14	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
OR7D2	162998	genome.wustl.edu	37	19	9296529	9296529	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175883.1	+1	provisional	p.Q24	0.978	94	0%	43	48.8%	0	-	-	-	-	superfamily_SSF81321
OR7E24	26648	genome.wustl.edu	37	19	9361974	9361974	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079935.1	+1	provisional	p.S85	0.959	59	0%	63	47.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZNF559	84527	genome.wustl.edu	37	19	9449921	9449921	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032497.1	+1	provisional	p.T29I	0.013	256	0%	150	51.3%	10	40%	benign(0.252)	tolerated(0.09)	neutral(0.323)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZNF177	7730	genome.wustl.edu	37	19	9492003	9492003	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003451.2	+1	validated	p.R172S	1.000	180	0%	92	46.7%	5	80%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF266	10781	genome.wustl.edu	37	19	9524066	9524066	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006631.2	-1	validated	p.R512Q	0.006	106	0.9%	60	48.3%	32	31.2%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF560	147741	genome.wustl.edu	37	19	9578016	9578016	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152476.2	-1	validated	p.R536Q	0.047	151	0%	60	45%	0	-	benign(0.075)	tolerated(0.07)	neutral(0.324)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF560	147741	genome.wustl.edu	37	19	9578436	9578436	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152476.2	-1	validated	p.R396Q	0.002	266	0.4%	105	41%	0	-	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF560	147741	genome.wustl.edu	37	19	9578679	9578679	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152476.2	-1	validated	p.S315N	0.001	432	0%	200	38%	0	-	benign(0.176)	deleterious(0.04)	neutral(0.365)	NULL
ZNF561	93134	genome.wustl.edu	37	19	9721222	9721222	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152289.2	-1	validated	p.K372T	0.986	317	0%	170	41.2%	40	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF846	162993	genome.wustl.edu	37	19	9868260	9868260	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077624.1	-1	validated	p.R498Q	0.806	170	0%	102	53.9%	0	-	probably_damaging(0.965)	deleterious(0.01)	deleterious(0.812)	HMMSmart_SM00614,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
OLFM2	93145	genome.wustl.edu	37	19	9965044	9965044	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058164.2	-1	provisional	p.A395T	0.999	24	0%	28	64.3%	56	42.8%	possibly_damaging(0.944)	deleterious(0.01)	deleterious(0.794)	HMMPfam_OLF,HMMSmart_OLF
P2RY11	5032	genome.wustl.edu	37	19	10224713	10224713	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002566.4	+1	reviewed	p.R142*	0.017	15	0%	16	37.5%	27	40.7%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ICAM3	3385	genome.wustl.edu	37	19	10449542	10449542	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002162.3	-1	reviewed	p.C53	1.000	51	0%	35	34.3%	7	0%	-	-	-	HMMPfam_ICAM_N,superfamily_SSF48726
ICAM3	3385	genome.wustl.edu	37	19	10449598	10449598	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002162.3	-1	reviewed	p.R35W	0.000	44	0%	38	47.4%	2	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_ICAM_N,superfamily_SSF48726
TYK2	7297	genome.wustl.edu	37	19	10464841	10464841	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003331.4	-1	reviewed	p.V929M	1.000	23	0%	27	37%	68	45.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP
CDC37	11140	genome.wustl.edu	37	19	10502351	10502351	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007065.3	-1	reviewed	p.D338G	1.000	17	0%	20	50%	354	50.5%	probably_damaging(0.969)	deleterious(0.02)	deleterious(0.794)	HMMPfam_CDC37_C,superfamily_Hsp90 co-chaperone CDC37
CDC37	11140	genome.wustl.edu	37	19	10504108	10504108	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007065.3	-1	reviewed	p.R246C	1.000	13	0%	11	63.6%	248	47.9%	probably_damaging(0.956)	deleterious(0.03)	deleterious(0.764)	HMMPfam_CDC37_M,superfamily_Hsp90 co-chaperone CDC37
PDE4A	5141	genome.wustl.edu	37	19	10574586	10574586	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111307.1	+1	validated	p.R621C	1.000	24	0%	26	42.3%	13	76.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PDEase_I,superfamily_HD-domain/PDEase-like
PDE4A	5141	genome.wustl.edu	37	19	10574654	10574654	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380686	+1	known	p.V309	0.970	14	0%	22	36.4%	0	-	-	-	-	HMMPfam_PDEase_I,superfamily_HD-domain/PDEase-like
AP1M2	10053	genome.wustl.edu	37	19	10692494	10692494	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005498.4	-1	reviewed	p.V110I	0.996	59	0%	61	50.8%	95	52.6%	benign(0.001)	tolerated(1)	-	superfamily_SNARE-like
SLC44A2	57153	genome.wustl.edu	37	19	10742770	10742770	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020428.3	+1	validated	p.R254H	1.000	150	0%	98	41.8%	81	41.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC44A2	57153	genome.wustl.edu	37	19	10745557	10745557	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020428.3	+1	validated	p.A317T	1.000	80	0%	68	35.3%	87	48.2%	benign(0.001)	tolerated(0.25)	neutral(0.037)	HMMPfam_DUF580
QTRT1	81890	genome.wustl.edu	37	19	10812883	10812883	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031209.2	+1	validated	p.E135G	1.000	20	0%	24	54.2%	73	54.7%	possibly_damaging(0.639)	deleterious(0.04)	deleterious(0.573)	superfamily_tRNA_ribo_trans
DNM2	1785	genome.wustl.edu	37	19	10887837	10887837	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005360.1	+1	reviewed	p.D211	0.974	62	0%	47	46.8%	98	44.8%	-	-	-	HMMSmart_SM00053,superfamily_P-loop containing nucleoside triphosphate hydrolases
CARM1	10498	genome.wustl.edu	37	19	11030563	11030563	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199141.1	+1	validated	p.P373S	1.000	39	0%	37	37.8%	56	37.5%	possibly_damaging(0.822)	deleterious(0.03)	deleterious(0.675)	superfamily_SSF53335
SMARCA4	6597	genome.wustl.edu	37	19	11123648	11123648	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128849.1	+1	reviewed	p.V766	1.000	26	0%	32	37.5%	88	50%	-	-	-	HMMPfam_SNF2_N,HMMSmart_DEXDc,superfamily_SSF52540
LDLR	3949	genome.wustl.edu	37	19	11217265	11217265	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000527.3	+1	reviewed	p.E240A	1.000	59	0%	43	41.9%	18	55.5%	possibly_damaging(0.653)	deleterious(0.01)	deleterious(0.635)	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,superfamily_LDL receptor-like module
LDLR	3949	genome.wustl.edu	37	19	11224368	11224368	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000527.3	+1	reviewed	p.V506M	0.000	30	0%	26	30.8%	21	19%	benign(0.106)	tolerated(0.07)	neutral(0.327)	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain
KANK2	25959	genome.wustl.edu	37	19	11303725	11303725	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136191.2	-1	validated	p.S344I	1.000	6	0.000	10	0.500	12	41.6%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	NULL
DOCK6	57572	genome.wustl.edu	37	19	11333710	11333710	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020812.2	-1	validated	p.R1010W	1.000	12	0%	19	47.4%	15	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LPPR2	64748	genome.wustl.edu	37	19	11468409	11468409	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022737.2	+1	validated	p.F20	0.989	60	0%	54	37%	39	48.7%	-	-	-	NULL
PRKCSH	5589	genome.wustl.edu	37	19	11546960	11546960	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002743.2	+1	reviewed	p.L8M	1.000	12	0%	12	33.3%	327	10.3%	unknown(0)	tolerated(0.23)	-	NULL
ZNF653	115950	genome.wustl.edu	37	19	11596563	11596563	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138783.3	-1	validated	p.R493Q	1.000	124	0%	108	47.2%	14	50%	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	superfamily_SSF57667
ZNF653	115950	genome.wustl.edu	37	19	11606860	11606860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138783.3	-1	validated	p.T155M	0.998	30	0%	13	53.8%	12	58.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ECSIT	51295	genome.wustl.edu	37	19	11623935	11623935	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016581.3	-1	validated	p.E225G	1.000	25	0%	21	66.7%	48	41.6%	benign(0.026)	deleterious(0.02)	neutral(0.384)	HMMPfam_ECSIT
ECSIT	51295	genome.wustl.edu	37	19	11624942	11624942	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016581.3	-1	validated	p.R64M	0.000	11	0%	18	22.2%	34	17.6%	benign(0.03)	tolerated(0.09)	neutral(0.298)	HMMPfam_ECSIT
ACP5	54	genome.wustl.edu	37	19	11687971	11687971	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111034.1	-1	reviewed	p.I54	0.697	33	0%	29	44.8%	11	0%	-	-	-	HMMPfam_Metallophos,superfamily_SSF56300
ZNF441	126068	genome.wustl.edu	37	19	11892500	11892500	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152355.2	+1	validated	p.G621S	1.000	128	0%	74	56.8%	5	20%	possibly_damaging(0.457)	deleterious(0.03)	deleterious(0.514)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF440	126070	genome.wustl.edu	37	19	11943086	11943086	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152357.2	+1	validated	p.E365D	1.000	122	0%	63	12.7%	9	33.3%	benign(0.002)	deleterious(0.03)	neutral(0.364)	superfamily_SSF57667
ZNF440	126070	genome.wustl.edu	37	19	11943545	11943545	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152357.2	+1	validated	p.S518	0.000	99	0%	50	50%	4	50%	-	-	-	NULL
ZNF439	90594	genome.wustl.edu	37	19	11979347	11979347	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152262.2	+1	provisional	p.Q488R	0.736	133	0%	48	45.8%	8	12.5%	benign(0.018)	deleterious(0)	neutral(0.445)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF69	7620	genome.wustl.edu	37	19	12016327	12016327	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000429654	+1	known	p.A372V	0.000	184	0%	86	46.5%	5	80%	benign(0.001)	tolerated(0.49)	neutral(0.011)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF700	90592	genome.wustl.edu	37	19	12059125	12059125	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144566.1	+1	provisional	p.E96*	0.255	389	0%	176	36.4%	8	75%	-	-	-	NULL
ZNF700	90592	genome.wustl.edu	37	19	12059270	12059270	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144566.1	+1	provisional	p.S144I	0.201	290	0%	161	14.9%	7	28.5%	possibly_damaging(0.805)	tolerated(0.27)	neutral(0.337)	NULL
ZNF878	729747	genome.wustl.edu	37	19	12154644	12154644	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080404.1	-1	inferred	p.K571	0.000	190	0%	94	41.5%	1	100%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF844	284391	genome.wustl.edu	37	19	12186666	12186666	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136501.1	+1	provisional	p.E244A	0.002	126	0%	59	50.8%	4	25%	possibly_damaging(0.918)	deleterious(0.04)	deleterious(0.718)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF844	284391	genome.wustl.edu	37	19	12187461	12187461	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136501.1	+1	provisional	p.V509A	1.000	193	0%	81	9.9%	5	0%	benign(0.382)	deleterious(0)	deleterious(0.567)	NULL
ZNF844	284391	genome.wustl.edu	37	19	12187644	12187644	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136501.1	+1	provisional	p.S570Y	0.000	176	0%	84	51.2%	8	37.5%	possibly_damaging(0.819)	-	-	NULL
ZNF20	7568	genome.wustl.edu	37	19	12244686	12244686	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021143.2	-1	validated	p.C105	0.000	195	0%	105	45.7%	10	60%	-	-	-	HMMSmart_SM00355
ZNF136	7695	genome.wustl.edu	37	19	12296976	12296976	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003437.2	+1	validated	p.G60W	0.484	273	0%	98	26.5%	5	60%	possibly_damaging(0.917)	deleterious(0.01)	deleterious(0.774)	HMMSmart_KRAB,superfamily_Krueppel-associated_box
LOC100287841	100287841	genome.wustl.edu	37	19	12358279	12358279	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343641.1	-1	model	p.R479Q	0.998	46	0%	18	61.1%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF44	51710	genome.wustl.edu	37	19	12384252	12384252	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016264.3	-1	validated	p.R273I	0.280	250	0%	114	42.1%	6	33.3%	benign(0.367)	deleterious(0.05)	neutral(0.462)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF44	51710	genome.wustl.edu	37	19	12384826	12384826	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016264.3	-1	validated	p.E82*	0.009	233	0%	130	40.8%	5	40%	-	-	-	NULL
ZNF442	79973	genome.wustl.edu	37	19	12461473	12461473	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030824.2	-1	validated	p.R309Q	0.000	288	0.3%	160	46.9%	0	-	benign(0.151)	tolerated(0.51)	neutral(0.022)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF709	163051	genome.wustl.edu	37	19	12575345	12575345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152601.3	-1	validated	p.R464Q	0.000	122	0%	82	36.6%	3	66.6%	probably_damaging(0.993)	tolerated(0.76)	neutral(0.451)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
MAN2B1	4125	genome.wustl.edu	37	19	12758061	12758061	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000528.3	-1	reviewed	p.W970L	1.000	42	0%	43	37.2%	120	27.5%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_Gal_mut_like,HMMPfam_Glyco_hydro_38C
WDR83	84292	genome.wustl.edu	37	19	12781090	12781090	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099737.2	+1	reviewed	p.G107	0.996	40	2.5%	48	35.4%	28	42.8%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
DHPS	1725	genome.wustl.edu	37	19	12788163	12788163	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001930.2	-1	reviewed	p.G242	0.002	28	0%	37	35.1%	83	43.3%	-	-	-	HMMPfam_DS,superfamily_DHS-like NAD/FAD-binding domain
DHPS	1725	genome.wustl.edu	37	19	12791009	12791009	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441196	-1	known	e2+1	1.000	92	0%	86	40.7%	94	45.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	-
TNPO2	30000	genome.wustl.edu	37	19	12814610	12814610	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136196.1	-1	validated	p.S676	0.004	58	0%	64	46.9%	55	41.8%	-	-	-	HMMPfam_HEAT,superfamily_ARM repeat
TNPO2	30000	genome.wustl.edu	37	19	12822254	12822254	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136196.1	-1	validated	p.A325T	1.000	36	0%	40	35%	51	49%	benign(0)	tolerated(0.57)	neutral(0.006)	superfamily_ARM repeat
RNASEH2A	10535	genome.wustl.edu	37	19	12918272	12918272	+	Silent	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006397.2	+1	reviewed	p.A121	0.076	93	0%	77	37.7%	108	45.3%	-	-	-	HMMPfam_RNase_HII,superfamily_Ribonuclease H-like
MAST1	22983	genome.wustl.edu	37	19	12969543	12969543	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014975.2	+1	validated	p.E452D	0.984	55	0%	43	14%	6	33.3%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
FARSA	2193	genome.wustl.edu	37	19	13035582	13035582	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004461.2	-1	validated	p.V356I	1.000	22	0%	38	21.1%	123	24.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_tRNA-synt_2d,superfamily_Class II aaRS and biotin synthetases
NFIX	4784	genome.wustl.edu	37	19	13184243	13184243	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002501.2	+1	validated	p.L210	1.000	243	0%	203	38.4%	107	51.4%	-	-	-	NULL
NFIX	4784	genome.wustl.edu	37	19	13201123	13201123	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002501.2	+1	validated	p.R422Q	1.000	33	3%	29	44.8%	137	43.7%	probably_damaging(0.999)	tolerated(0.24)	deleterious(0.528)	NULL
CACNA1A	773	genome.wustl.edu	37	19	13342653	13342653	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127222.1	-1	reviewed	p.W1757C	1.000	62	0%	49	30.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1A	773	genome.wustl.edu	37	19	13365963	13365963	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127222.1	-1	reviewed	p.F1567	1.000	30	0%	38	39.5%	0	-	-	-	-	superfamily_Voltage-gated potassium channels
CACNA1A	773	genome.wustl.edu	37	19	13373582	13373582	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127222.1	-1	reviewed	p.P1352H	1.000	207	0%	139	41.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
ZSWIM4	65249	genome.wustl.edu	37	19	13910592	13910592	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023072.2	+1	validated	p.S71L	0.997	36	0%	36	13.9%	4	0%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
CC2D1A	54862	genome.wustl.edu	37	19	14034150	14034150	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017721.4	+1	reviewed	p.P549L	0.998	11	0%	23	39.1%	46	63%	probably_damaging(0.955)	deleterious(0)	deleterious(0.843)	HMMSmart_SM00685
PODNL1	79883	genome.wustl.edu	37	19	14048698	14048698	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024825.3	-1	validated	p.R49H	0.942	15	0%	19	57.9%	4	50%	benign(0.082)	tolerated(0.18)	neutral(0.062)	NULL
IL27RA	9466	genome.wustl.edu	37	19	14153356	14153356	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004843.2	+1	reviewed	p.R209Q	0.395	63	0%	60	36.7%	11	36.3%	benign(0.012)	tolerated(0.57)	neutral(0.007)	HMMSmart_SM00060,superfamily_Fibronectin type III
PALM3	342979	genome.wustl.edu	37	19	14167249	14167249	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145028.1	-1	validated	p.R116C	1.000	28	0%	35	25.7%	0	-	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	NULL
LPHN1	22859	genome.wustl.edu	37	19	14273875	14273875	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008701.2	-1	reviewed	p.T251	0.621	15	0%	29	51.7%	34	50%	-	-	-	HMMPfam_OLF,HMMSmart_SM00284
ENSG00000248045	0	genome.wustl.edu	37	19	14281404	14281404	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000498856	+1	novel	NULL	0.003	4	0.000	14	0.429	3	66.6%	-	-	-	-
LPHN1	22859	genome.wustl.edu	37	19	14288466	14288466	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008701.2	-1	reviewed	p.D54G	1.000	11	0.000	7	0.571	17	29.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Gal_Lectin
CD97	976	genome.wustl.edu	37	19	14499261	14499261	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_078481.2	+1	reviewed	e2-1	0.208	77	0%	59	13.6%	0	-	-	-	-	-
DDX39A	10212	genome.wustl.edu	37	19	14521883	14521883	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005804.2	-1	reviewed	p.A177	0.091	26	0%	27	40.7%	148	39.1%	-	-	-	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
PKN1	5585	genome.wustl.edu	37	19	14580247	14580247	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_213560.1	+1	reviewed	p.V697M	1.000	24	0%	36	47.2%	161	49.6%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
DNAJB1	3337	genome.wustl.edu	37	19	14626936	14626936	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006145.1	-1	provisional	p.T280M	1.000	41	0%	44	38.6%	149	41.6%	benign(0.326)	tolerated(0.11)	neutral(0.373)	HMMPfam_DnaJ_C,superfamily_HSP40/DnaJ peptide-binding domain
EMR2	30817	genome.wustl.edu	37	19	14877890	14877890	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013447.2	-1	reviewed	p.L129	0.327	24	0%	30	76.7%	1	0%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
EMR2	30817	genome.wustl.edu	37	19	14884860	14884860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013447.2	-1	reviewed	p.A30V	0.008	35	0%	48	45.8%	3	0%	possibly_damaging(0.792)	deleterious(0.02)	deleterious(0.680)	HMMSmart_SM00181
OR7C1	26664	genome.wustl.edu	37	19	14910694	14910694	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198944.1	-1	validated	p.I85M	0.000	101	0%	67	31.3%	0	-	benign(0.105)	tolerated(0.23)	neutral(0.050)	HMMPfam_7tm_1,superfamily_SSF81321
CCDC105	126402	genome.wustl.edu	37	19	15132470	15132470	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173482.2	+1	validated	p.L362I	0.987	56	0%	49	40.8%	0	-	benign(0.237)	tolerated(0.22)	neutral(0.066)	NULL
CCDC105	126402	genome.wustl.edu	37	19	15132721	15132721	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173482.2	+1	validated	p.R414H	0.839	11	0%	17	58.8%	0	-	benign(0.032)	tolerated(0.26)	neutral(0.036)	NULL
ILVBL	10994	genome.wustl.edu	37	19	15226155	15226155	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006844.3	-1	reviewed	p.D603N	0.002	15	0%	17	41.2%	125	21.6%	benign(0.001)	tolerated(0.19)	neutral(0.050)	HMMPfam_TPP_enzyme_C,superfamily_Thiamin diphosphate-binding fold (THDP-binding)
NOTCH3	4854	genome.wustl.edu	37	19	15285189	15285189	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000435.2	-1	reviewed	p.A1476T	0.954	14	0.000	9	0.778	33	45.4%	benign(0.004)	tolerated(0.59)	neutral(0.004)	HMMPfam_Notch,HMMSmart_SM00004,superfamily_Notch domain
BRD4	23476	genome.wustl.edu	37	19	15349220	15349220	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058243.2	-1	reviewed	p.L1353I	1.000	187	0%	115	12.2%	40	30%	probably_damaging(0.984)	-	-	NULL
BRD4	23476	genome.wustl.edu	37	19	15355083	15355083	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058243.2	-1	reviewed	p.T847N	1.000	20	0%	14	28.6%	71	49.2%	unknown(0)	-	-	NULL
BRD4	23476	genome.wustl.edu	37	19	15383824	15383824	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058243.2	-1	reviewed	p.T29	1.000	78	0%	59	13.6%	56	8.9%	-	-	-	NULL
WIZ	58525	genome.wustl.edu	37	19	15537975	15537975	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021241.2	-1	validated	p.P300H	1.000	36	0%	29	31%	38	57.8%	unknown(0)	deleterious(0)	-	NULL
CYP4F22	126410	genome.wustl.edu	37	19	15654824	15654824	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173483.3	+1	reviewed	p.E328K	0.998	43	0%	37	51.4%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_p450,superfamily_Cytochrome_P450
LOC100287986	100287986	genome.wustl.edu	37	19	15740068	15740068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343618.1	-1	model	p.R4C	1.000	23	0%	43	55.8%	0	-	possibly_damaging(0.468)	tolerated(0.18)	neutral(0.209)	NULL
CYP4F3	4051	genome.wustl.edu	37	19	15758104	15758104	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000896.2	+1	reviewed	p.K165N	0.106	154	0%	94	45.7%	0	-	possibly_damaging(0.472)	tolerated(0.09)	neutral(0.453)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP4F3	4051	genome.wustl.edu	37	19	15763647	15763647	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000896.2	+1	reviewed	p.A334S	1.000	61	0%	73	21.9%	0	-	benign(0.396)	tolerated(0.1)	neutral(0.413)	HMMPfam_p450,superfamily_Cytochrome_P450
LOC646575	646575	genome.wustl.edu	37	19	15775174	15775174	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343630.1	+1	model	p.E20G	0.000	137	0%	98	38.8%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP4F12	66002	genome.wustl.edu	37	19	15807854	15807854	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023944.2	+1	reviewed	p.L512F	0.999	26	0%	20	45%	0	-	possibly_damaging(0.866)	deleterious(0.03)	deleterious(0.700)	HMMPfam_p450,superfamily_Cytochrome P450
OR10H2	26538	genome.wustl.edu	37	19	15839437	15839437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013939.2	+1	validated	p.A195V	0.000	120	0%	110	44.5%	0	-	benign(0)	tolerated(0.43)	neutral(0.013)	HMMPfam_7tm_1,superfamily_SSF81321
OR10H3	26532	genome.wustl.edu	37	19	15853063	15853063	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013938.1	+1	provisional	p.L287	0.004	228	0%	146	45.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
ENSG00000225607	0	genome.wustl.edu	37	19	15881931	15881931	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000412610	-1	known	p.R213H	0.810	74	0%	64	50%	0	-	benign(0.018)	tolerated(0.09)	neutral(0.297)	HMMPfam_p450,superfamily_Cytochrome P450
OR10H5	284433	genome.wustl.edu	37	19	15904867	15904867	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004466.1	+1	provisional	p.G3	0.000	97	0%	104	37.5%	0	-	-	-	-	superfamily_SSF81321
CYP4F2	8529	genome.wustl.edu	37	19	15990655	15990655	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001082.3	-1	reviewed	p.R390W	0.997	57	0%	46	41.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP4F2	8529	genome.wustl.edu	37	19	16008282	16008282	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001082.3	-1	reviewed	p.R47H	0.002	41	0%	46	41.3%	0	-	benign(0.039)	tolerated(0.17)	neutral(0.061)	NULL
OR10H4	126541	genome.wustl.edu	37	19	16060750	16060750	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004465.1	+1	validated	p.F311L	0.001	59	0%	33	54.5%	0	-	benign(0)	tolerated(0.69)	neutral(0.002)	superfamily_SSF81321
AP1M1	8907	genome.wustl.edu	37	19	16314296	16314296	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130524.1	+1	reviewed	p.G23	0.052	53	0%	41	39%	21	33.3%	-	-	-	superfamily_Longin_like
MED26	9441	genome.wustl.edu	37	19	16687659	16687659	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004831.3	-1	validated	p.R328W	0.881	4	0.000	7	0.571	3	66.6%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
TMEM38A	79041	genome.wustl.edu	37	19	16798983	16798983	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024074.1	+1	provisional	p.S234N	0.794	27	0%	27	40.7%	6	100%	benign(0.059)	tolerated(0.19)	neutral(0.054)	NULL
SIN3B	23309	genome.wustl.edu	37	19	16957898	16957898	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015260.1	+1	provisional	p.F234V	1.000	20	0%	25	48%	38	57.8%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_PAH,superfamily_PAH2 domain
MYO9B	4650	genome.wustl.edu	37	19	17283272	17283272	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004145.3	+1	reviewed	p.V640	0.999	43	0%	35	45.7%	24	33.3%	-	-	-	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYO9B	4650	genome.wustl.edu	37	19	17305548	17305548	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004145.3	+1	reviewed	p.Q1104H	0.002	42	0%	27	40.7%	23	78.2%	possibly_damaging(0.843)	tolerated(0.12)	deleterious(0.584)	NULL
MYO9B	4650	genome.wustl.edu	37	19	17321595	17321595	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004145.3	+1	reviewed	p.G1956	0.000	53	0%	55	47.3%	52	34.6%	-	-	-	NULL
USE1	55850	genome.wustl.edu	37	19	17330146	17330146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018467.3	+1	validated	p.L183F	1.000	33	0%	33	24.2%	38	15.7%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Use1
NR2F6	2063	genome.wustl.edu	37	19	17343214	17343214	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005234.3	-1	validated	p.D388N	1.000	20	0%	27	33.3%	70	21.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hormone_recep,superfamily_Nuclear receptor ligand-binding domain
USHBP1	83878	genome.wustl.edu	37	19	17367444	17367444	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031941.3	-1	validated	p.R436C	0.724	33	0%	27	37%	1	0%	benign(0.002)	tolerated(0.1)	neutral(0.286)	NULL
USHBP1	83878	genome.wustl.edu	37	19	17370187	17370187	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031941.3	-1	validated	p.Q319H	0.952	45	0%	39	41%	0	-	possibly_damaging(0.926)	deleterious(0.02)	deleterious(0.758)	HMMPfam_MCC-bdg_PDZ
DDA1	79016	genome.wustl.edu	37	19	17425150	17425150	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024050.5	+1	validated	p.R30*	1.000	23	0%	22	50%	67	29.8%	-	-	-	HMMPfam_DDA1
ANO8	57719	genome.wustl.edu	37	19	17444520	17444520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020959.2	-1	validated	p.D66N	1.000	11	0.000	8	0.625	21	61.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
GTPBP3	84705	genome.wustl.edu	37	19	17449790	17449790	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133644.2	+1	validated	p.D207N	1.000	8	0.000	18	0.556	12	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF52540
PLVAP	83483	genome.wustl.edu	37	19	17476214	17476214	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031310.1	-1	provisional	p.L354M	0.913	21	0%	28	35.7%	59	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_PV-1
FCHO1	23149	genome.wustl.edu	37	19	17885217	17885217	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015122.2	+1	validated	p.R284W	0.964	9	0.000	19	0.263	4	0%	possibly_damaging(0.507)	deleterious(0.01)	deleterious(0.575)	NULL
MAST3	23031	genome.wustl.edu	37	19	18249836	18249836	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015016.1	+1	validated	p.R674C	0.965	32	0%	31	12.9%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TK_X
MAST3	23031	genome.wustl.edu	37	19	18255895	18255895	+	Silent	SNP	G	G	A	rs56151275		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015016.1	+1	validated	p.P936	0.331	11	0%	12	33.3%	14	28.5%	-	-	-	NULL
SSBP4	170463	genome.wustl.edu	37	19	18538217	18538217	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032627.3	+1	validated	p.Q39P	1.000	11	0%	15	26.7%	63	47.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_LisH
ELL	8178	genome.wustl.edu	37	19	18576356	18576356	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006532.3	-1	validated	p.G112D	1.000	17	0%	16	50%	12	41.6%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_ELL
COMP	1311	genome.wustl.edu	37	19	18897454	18897454	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000095.2	-1	reviewed	p.R381H	0.575	62	0%	58	34.5%	13	15.3%	possibly_damaging(0.507)	tolerated(0.22)	neutral(0.212)	HMMPfam_TSP_3,superfamily_SSF103647
UPF1	5976	genome.wustl.edu	37	19	18963082	18963082	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002911.3	+1	reviewed	p.D317N	1.000	33	0%	18	38.9%	47	38.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
UPF1	5976	genome.wustl.edu	37	19	18964071	18964071	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002911.3	+1	reviewed	p.L356	1.000	29	0%	43	55.8%	56	35.7%	-	-	-	NULL
UPF1	5976	genome.wustl.edu	37	19	18976892	18976892	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002911.3	+1	reviewed	p.V1093M	1.000	38	0%	38	50%	74	47.2%	benign(0.065)	tolerated(0.06)	neutral(0.327)	NULL
CERS1	10715	genome.wustl.edu	37	19	19004328	19004328	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021267.3	-1	reviewed	p.S102	0.927	35	0%	38	44.7%	42	42.8%	-	-	-	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724
DDX49	54555	genome.wustl.edu	37	19	19033521	19033521	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019070.4	+1	validated	p.D248	1.000	10	0%	14	50%	83	49.3%	-	-	-	superfamily_SSF52540
MAU2	23383	genome.wustl.edu	37	19	19451657	19451657	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015329.3	+1	validated	p.A185V	0.998	41	0%	44	13.6%	13	23%	benign(0)	tolerated(0.78)	neutral(0.001)	HMMPfam_Cohesin_load,superfamily_TPR-like
GATAD2A	54815	genome.wustl.edu	37	19	19609385	19609385	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017660.3	+1	provisional	p.R353H	1.000	16	0%	24	41.7%	50	52%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
YJEFN3	374887	genome.wustl.edu	37	19	19646353	19646353	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198537.2	+1	validated	p.E187K	1.000	18	0%	23	26.1%	20	45%	benign(0.008)	tolerated(0.42)	neutral(0.014)	HMMPfam_YjeF_N,superfamily_YjeF N-terminal domain-like
GMIP	51291	genome.wustl.edu	37	19	19753363	19753363	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016573.2	-1	reviewed	p.E29K	0.994	61	0%	52	55.8%	22	40.9%	probably_damaging(0.99)	tolerated(0.14)	deleterious(0.691)	NULL
ZNF101	94039	genome.wustl.edu	37	19	19790604	19790604	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033204.2	+1	provisional	p.R269Q	0.135	77	1.3%	39	43.6%	7	14.2%	benign(0.121)	tolerated(0.49)	neutral(0.020)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF14	7561	genome.wustl.edu	37	19	19822367	19822367	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021030.2	-1	reviewed	p.R575*	0.000	157	0%	45	42.2%	9	44.4%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF506	440515	genome.wustl.edu	37	19	19905725	19905725	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099269.2	-1	validated	p.R324H	0.000	126	0%	69	46.4%	17	58.8%	benign(0.085)	tolerated(0.56)	neutral(0.013)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF682	91120	genome.wustl.edu	37	19	20117649	20117649	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033196.2	-1	validated	p.R221I	1.000	204	0%	93	40.9%	5	20%	benign(0.003)	tolerated(0.16)	neutral(0.059)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000250063	0	genome.wustl.edu	37	19	20368527	20368527	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000512225	-1	novel	NULL	0.433	71	0%	42	47.6%	3	100%	-	-	-	-
ZNF66P	7617	genome.wustl.edu	37	19	20989256	20989256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000425625	+1	known	p.P330S	1.000	53	0%	19	42.1%	4	0%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF85	7639	genome.wustl.edu	37	19	21132380	21132380	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003429.3	+1	validated	p.S354P	0.000	104	0%	57	43.9%	3	66.6%	possibly_damaging(0.882)	tolerated(0.26)	neutral(0.378)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF85	7639	genome.wustl.edu	37	19	21132617	21132617	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003429.3	+1	validated	p.K433Q	0.998	123	0%	58	53.4%	7	100%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF85	7639	genome.wustl.edu	37	19	21133039	21133039	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003429.3	+1	validated	p.K573N	0.544	81	0%	42	59.5%	7	28.5%	possibly_damaging(0.67)	deleterious(0)	deleterious(0.682)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF714	148206	genome.wustl.edu	37	19	21299667	21299667	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000291770	+1	known	p.S66Y	0.001	324	0%	148	45.3%	5	20%	benign(0.084)	tolerated(0.18)	neutral(0.062)	NULL
ZNF493	284443	genome.wustl.edu	37	19	21606231	21606231	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076678.2	+1	validated	p.R257K	0.948	116	0%	31	51.6%	7	42.8%	benign(0.001)	tolerated(0.31)	neutral(0.027)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF493	284443	genome.wustl.edu	37	19	21606938	21606938	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076678.2	+1	validated	p.E493*	0.007	58	0%	17	29.4%	3	66.6%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF493	284443	genome.wustl.edu	37	19	21607146	21607146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076678.2	+1	validated	p.T562I	0.005	126	0%	29	34.5%	5	40%	possibly_damaging(0.471)	tolerated(0.24)	neutral(0.193)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF493	284443	genome.wustl.edu	37	19	21607717	21607717	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001076678.2	+1	validated	p.R752	0.000	108	0%	26	38.5%	5	80%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000196686	0	genome.wustl.edu	37	19	21608024	21608024	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000341265	-1	novel	NULL	0.001	38	0.000	5	0.800	2	0%	-	-	-	-
ZNF429	353088	genome.wustl.edu	37	19	21719788	21719788	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001415.2	+1	provisional	p.K311	0.997	35	0%	23	65.2%	6	33.3%	-	-	-	superfamily_SSF57667
ZNF100	163227	genome.wustl.edu	37	19	21909852	21909852	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173531.3	-1	validated	p.R421K	0.998	123	0%	59	22%	11	54.5%	benign(0.001)	tolerated(0.25)	neutral(0.037)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF100	163227	genome.wustl.edu	37	19	21910023	21910023	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173531.3	-1	validated	p.K364M	0.856	75	0%	26	46.2%	10	50%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF43	7594	genome.wustl.edu	37	19	21991861	21991861	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003423.2	-1	validated	p.P326	0.003	96	0%	30	43.3%	5	60%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF208	7757	genome.wustl.edu	37	19	22154834	22154834	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007153.3	-1	provisional	p.Y873C	0.000	265	0%	70	44.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF257	113835	genome.wustl.edu	37	19	22255685	22255685	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033468.2	+1	provisional	p.Q26H	0.256	541	0%	258	40.7%	8	25%	probably_damaging(0.963)	deleterious(0.01)	deleterious(0.811)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
LOC100287226	100287226	genome.wustl.edu	37	19	22497907	22497907	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343636.1	+1	model	p.K430T	0.916	23	0%	11	45.5%	0	-	possibly_damaging(0.478)	deleterious(0.01)	deleterious(0.564)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LOC100287226	100287226	genome.wustl.edu	37	19	22499522	22499522	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343636.1	+1	model	p.K968N	1.000	65	0%	31	54.8%	0	-	benign(0.023)	deleterious(0.01)	neutral(0.407)	superfamily_C2H2 and C2HC zinc fingers
ENSG00000235276	0	genome.wustl.edu	37	19	22782547	22782547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000421840	+1	known	p.R49W	0.028	14	0.000	6	0.667	0	-	-	-	-	NULL
ZNF492	57615	genome.wustl.edu	37	19	22836791	22836791	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020855.2	+1	validated	p.R35I	0.013	456	0%	265	38.9%	3	33.3%	benign(0.193)	tolerated(0.11)	neutral(0.290)	NULL
LOC646864	646864	genome.wustl.edu	37	19	23040027	23040027	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001726885.1	+1	model	p.Q141*	0.247	146	0%	40	27.5%	0	-	-	-	-	NULL
ZNF728	388523	genome.wustl.edu	37	19	23158850	23158850	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001726961.1	-1	model	p.G430D	1.000	36	0%	10	40%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF728	388523	genome.wustl.edu	37	19	23159378	23159378	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001726961.1	-1	model	p.K254R	0.940	38	0%	17	41.2%	0	-	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF724P	440519	genome.wustl.edu	37	19	23405536	23405536	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418100	-1	known	p.K504R	1.000	22	0%	11	45.5%	4	25%	benign(0.405)	tolerated(0.06)	neutral(0.453)	superfamily_C2H2 and C2HC zinc fingers
ZNF724P	440519	genome.wustl.edu	37	19	23405871	23405871	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418100	-1	known	p.K392	1.000	33	0%	10	70%	2	0%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF724P	440519	genome.wustl.edu	37	19	23406757	23406757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418100	-1	known	p.R97I	0.000	49	0%	35	37.1%	0	-	benign(0.002)	tolerated(0.12)	neutral(0.261)	NULL
ZNF91	7644	genome.wustl.edu	37	19	23543702	23543702	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003430.2	-1	validated	p.K693N	0.022	410	0%	175	32%	6	33.3%	unknown(0)	deleterious(0.02)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF91	7644	genome.wustl.edu	37	19	23544955	23544955	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003430.2	-1	validated	p.L276I	0.000	315	0%	162	44.4%	4	25%	benign(0.002)	tolerated(0.28)	neutral(0.032)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF91	7644	genome.wustl.edu	37	19	23545427	23545427	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003430.2	-1	validated	p.E118D	0.015	340	0%	149	37.6%	1	100%	benign(0.163)	tolerated(0.2)	neutral(0.064)	NULL
ZNF91	7644	genome.wustl.edu	37	19	23557531	23557531	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003430.2	-1	validated	p.F22	0.367	366	0%	184	38%	3	100%	-	-	-	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
LOC100131479	100131479	genome.wustl.edu	37	19	23779741	23779741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001719802.1	+1	model	p.S155Y	0.045	32	0%	27	22.2%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF675	171392	genome.wustl.edu	37	19	23836981	23836981	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138330.2	-1	validated	p.R252*	1.000	252	0%	71	42.3%	7	57.1%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF675	171392	genome.wustl.edu	37	19	23837076	23837076	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138330.2	-1	validated	p.R220I	1.000	272	0%	95	40%	4	0%	benign(0.001)	tolerated(0.08)	neutral(0.300)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF675	171392	genome.wustl.edu	37	19	23837077	23837077	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138330.2	-1	validated	p.R220	1.000	274	0.4%	94	43.6%	4	100%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF681	148213	genome.wustl.edu	37	19	23927272	23927272	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138286.2	-1	validated	p.H360	1.000	133	0%	53	43.4%	6	33.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000104777	0	genome.wustl.edu	37	19	24102382	24102382	+	RNA	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000300996	-1	known	NULL	0.001	63	0%	37	48.6%	0	-	-	-	-	-
ENSG00000104777	0	genome.wustl.edu	37	19	24102712	24102712	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000300996	-1	known	NULL	0.038	131	0%	52	44.2%	0	-	-	-	-	-
ZNF726	730087	genome.wustl.edu	37	19	24116933	24116933	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000322487	+1	known	p.E618D	0.979	55	0%	24	50%	0	-	possibly_damaging(0.471)	deleterious(0.04)	deleterious(0.504)	superfamily_C2H2 and C2HC zinc fingers
URI1	8725	genome.wustl.edu	37	19	30496322	30496322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003796.2	+1	reviewed	p.R141I	1.000	269	0%	97	49.5%	24	37.5%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_Prefoldin,superfamily_Prefoldin
URI1	8725	genome.wustl.edu	37	19	30499953	30499953	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003796.2	+1	reviewed	p.S243F	0.997	75	0%	55	40%	41	43.9%	benign(0.009)	tolerated(0.21)	neutral(0.044)	NULL
ZNF536	9745	genome.wustl.edu	37	19	30934554	30934554	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014717.1	+1	provisional	p.Q29*	1.000	18	0%	16	31.2%	0	-	-	-	-	NULL
TSHZ3	57616	genome.wustl.edu	37	19	31769263	31769263	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020856.2	-1	validated	p.A479V	0.000	70	0%	49	44.9%	1	0%	benign(0)	tolerated(0.42)	neutral(0.014)	NULL
ZNF507	22847	genome.wustl.edu	37	19	32844607	32844607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136156.1	+1	validated	p.L291M	0.746	51	0%	36	58.3%	0	-	possibly_damaging(0.711)	tolerated(0.11)	deleterious(0.528)	NULL
ZNF507	22847	genome.wustl.edu	37	19	32844896	32844896	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136156.1	+1	validated	p.S387I	1.000	51	0%	33	30.3%	3	66.6%	benign(0.147)	deleterious(0.05)	neutral(0.358)	NULL
ZNF507	22847	genome.wustl.edu	37	19	32845539	32845539	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136156.1	+1	validated	p.N601	0.991	62	0%	36	38.9%	5	40%	-	-	-	NULL
TDRD12	91646	genome.wustl.edu	37	19	33222699	33222699	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001110822.1	+1	validated	p.D31	0.978	272	0%	109	47.7%	0	-	-	-	-	HMMPfam_TUDOR
CEP89	84902	genome.wustl.edu	37	19	33370283	33370283	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032816.3	-1	validated	p.E713*	0.981	128	0%	93	39.8%	11	54.5%	-	-	-	NULL
CEP89	84902	genome.wustl.edu	37	19	33457355	33457355	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032816.3	-1	validated	p.G19	1.000	30	0%	18	22.2%	10	40%	-	-	-	NULL
RHPN2	85415	genome.wustl.edu	37	19	33481461	33481461	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033103.4	-1	reviewed	p.E587K	0.999	51	0%	39	41%	18	38.8%	possibly_damaging(0.563)	tolerated(0.06)	deleterious(0.515)	HMMSmart_PDZ,superfamily_PDZ
RHPN2	85415	genome.wustl.edu	37	19	33493846	33493846	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033103.4	-1	reviewed	p.A274D	1.000	94	0%	60	46.7%	10	10%	probably_damaging(1)	tolerated(0.55)	deleterious(0.507)	HMMPfam_BRO1
LRP3	4037	genome.wustl.edu	37	19	33697219	33697219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002333.3	+1	validated	p.A515T	1.000	4	0.000	7	0.571	102	37.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CEBPG	1054	genome.wustl.edu	37	19	33870503	33870503	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001806.2	+1	reviewed	p.D120Y	1.000	154	0%	78	20.5%	36	16.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_BRLZ
CHST8	64377	genome.wustl.edu	37	19	34180210	34180210	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127895.1	+1	validated	p.S15P	0.998	15	0%	11	45.5%	0	-	probably_damaging(0.99)	deleterious(0.05)	deleterious(0.787)	NULL
CHST8	64377	genome.wustl.edu	37	19	34263782	34263782	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127895.1	+1	validated	p.R363	0.018	9	0.000	16	0.750	0	-	-	-	-	HMMPfam_Sulfotransfer_2
LSM14A	26065	genome.wustl.edu	37	19	34685433	34685433	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114093.1	+1	validated	p.R58*	1.000	174	0%	96	19.8%	54	22.2%	-	-	-	NULL
LSM14A	26065	genome.wustl.edu	37	19	34712437	34712437	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114093.1	+1	validated	p.E388*	1.000	159	0%	88	46.6%	40	17.5%	-	-	-	HMMPfam_FFD_TFG
UBA2	10054	genome.wustl.edu	37	19	34942896	34942896	+	Silent	SNP	G	G	A	rs146405147	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005499.2	+1	validated	p.T294	0.956	126	0%	64	54.7%	52	46.1%	-	-	-	superfamily_MoeB
UBA2	10054	genome.wustl.edu	37	19	34942993	34942993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005499.2	+1	validated	p.E327K	1.000	224	0%	89	46.1%	66	37.8%	benign(0.001)	tolerated(0.89)	-	superfamily_MoeB
ZNF599	148103	genome.wustl.edu	37	19	35250162	35250162	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007248.2	-1	validated	p.A515D	0.934	232	0%	103	41.7%	0	-	possibly_damaging(0.683)	deleterious(0.02)	deleterious(0.627)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF599	148103	genome.wustl.edu	37	19	35250822	35250822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007248.2	-1	validated	p.R295H	0.030	151	0%	68	51.5%	1	0%	possibly_damaging(0.934)	tolerated(0.28)	neutral(0.411)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF30	90075	genome.wustl.edu	37	19	35434572	35434572	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099437.1	+1	validated	p.C235	0.049	87	0%	43	53.5%	2	100%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF792	126375	genome.wustl.edu	37	19	35449879	35449879	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175872.4	-1	validated	p.A294T	0.001	162	0%	126	49.2%	6	16.6%	benign(0.382)	tolerated(0.38)	neutral(0.140)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
GRAMD1A	57655	genome.wustl.edu	37	19	35512877	35512877	+	Silent	SNP	C	C	T	rs180984713	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020895.3	+1	validated	p.S592	0.041	24	0%	11	54.5%	81	44.4%	-	-	-	NULL
FXYD5	53827	genome.wustl.edu	37	19	35655076	35655076	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014164.5	+1	reviewed	p.T104A	0.373	96	0%	74	44.6%	27	3.7%	possibly_damaging(0.741)	tolerated(0.24)	neutral(0.309)	NULL
FXYD5	53827	genome.wustl.edu	37	19	35655081	35655081	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014164.5	+1	reviewed	p.T105	0.000	107	0%	86	45.3%	30	0%	-	-	-	NULL
FAM187B	148109	genome.wustl.edu	37	19	35715902	35715902	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152481.1	-1	provisional	p.N312	0.000	12	0%	12	50%	0	-	-	-	-	NULL
FAM187B	148109	genome.wustl.edu	37	19	35719385	35719385	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152481.1	-1	provisional	p.T67A	0.000	37	0%	45	40%	0	-	benign(0.138)	tolerated(0.08)	neutral(0.311)	NULL
FFAR3	2865	genome.wustl.edu	37	19	35862822	35862822	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000246538	+1	known	p.E187	1.000	25	0%	30	43.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
GAPDHS	26330	genome.wustl.edu	37	19	36024439	36024439	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014364.4	+1	reviewed	p.R4C	0.974	12	0%	10	50%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
GAPDHS	26330	genome.wustl.edu	37	19	36024442	36024442	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014364.4	+1	reviewed	p.D5N	0.847	12	0%	10	50%	0	-	possibly_damaging(0.881)	deleterious(0)	deleterious(0.788)	NULL
MLL4	9757	genome.wustl.edu	37	19	36211135	36211135	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014727.1	+1	reviewed	p.G296S	1.000	11	0%	12	41.7%	6	0%	probably_damaging(0.998)	tolerated(0.49)	deleterious(0.485)	NULL
MLL4	9757	genome.wustl.edu	37	19	36212600	36212600	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014727.1	+1	reviewed	p.P784L	0.622	24	0%	31	45.2%	12	25%	probably_damaging(0.98)	-	-	NULL
MLL4	9757	genome.wustl.edu	37	19	36217198	36217198	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014727.1	+1	reviewed	p.V1316A	0.421	22	0%	37	35.1%	17	41.1%	benign(0.278)	-	-	NULL
MLL4	9757	genome.wustl.edu	37	19	36228630	36228630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014727.1	+1	reviewed	p.Q2548H	1.000	40	0%	28	14.3%	59	15.2%	possibly_damaging(0.761)	-	-	NULL
MLL4	9757	genome.wustl.edu	37	19	36228800	36228800	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014727.1	+1	reviewed	p.R2567C	1.000	90	1.1%	71	52.1%	48	47.9%	probably_damaging(0.99)	-	-	superfamily_SET domain
MLL4	9757	genome.wustl.edu	37	19	36228979	36228979	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014727.1	+1	reviewed	p.R2587*	1.000	47	0%	46	34.8%	50	42%	-	-	-	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
ARHGAP33	115703	genome.wustl.edu	37	19	36273546	36273546	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052948.3	+1	reviewed	p.H426	0.934	15	0%	15	80%	20	70%	-	-	-	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
NPHS1	4868	genome.wustl.edu	37	19	36339016	36339016	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004646.3	-1	reviewed	p.R456Q	0.857	18	0%	30	43.3%	0	-	probably_damaging(0.993)	tolerated(0.34)	deleterious(0.473)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin
KIRREL2	84063	genome.wustl.edu	37	19	36350483	36350483	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199180.2	+1	validated	p.S208I	1.000	34	0%	26	46.2%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin
KIRREL2	84063	genome.wustl.edu	37	19	36351560	36351560	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199180.2	+1	validated	p.D307N	1.000	30	0%	22	31.8%	0	-	benign(0.18)	tolerated(0.32)	neutral(0.041)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
KIRREL2	84063	genome.wustl.edu	37	19	36355569	36355569	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199180.2	+1	validated	p.D582G	0.546	100	0%	112	35.7%	0	-	possibly_damaging(0.798)	deleterious(0.02)	deleterious(0.683)	NULL
TYROBP	7305	genome.wustl.edu	37	19	36398352	36398352	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198125.2	-1	reviewed	p.A75	0.000	9	0.000	24	0.500	63	0%	-	-	-	NULL
LRFN3	79414	genome.wustl.edu	37	19	36431523	36431523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024509.1	+1	provisional	p.P399H	1.000	5	0.000	11	0.545	22	50%	benign(0.003)	tolerated(0.2)	neutral(0.049)	NULL
ALKBH6	84964	genome.wustl.edu	37	19	36501474	36501474	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032878.3	-1	validated	p.E178*	0.998	15	0%	27	55.6%	27	14.8%	-	-	-	HMMPfam_2OG-FeII_Oxy
ZNF146	7705	genome.wustl.edu	37	19	36727484	36727484	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099638.1	+1	validated	p.E48K	0.703	189	0%	76	40.8%	39	48.7%	benign(0)	tolerated(0.06)	neutral(0.323)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF146	7705	genome.wustl.edu	37	19	36728168	36728168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099638.1	+1	validated	p.A276T	1.000	91	0%	59	42.4%	60	48.3%	probably_damaging(0.991)	tolerated(0.16)	deleterious(0.504)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFP14	57677	genome.wustl.edu	37	19	36831910	36831910	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020917.1	-1	provisional	p.R273Q	0.112	127	0%	64	50%	4	75%	probably_damaging(0.995)	tolerated(1)	neutral(0.458)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
LOC644189	644189	genome.wustl.edu	37	19	36913200	36913200	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_016949.3	+1	model	NULL	0.921	56	0%	64	50%	0	-	-	-	-	-
ZNF529	57711	genome.wustl.edu	37	19	37047073	37047073	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145649.1	-1	validated	p.A14D	0.002	184	0%	75	52%	4	50%	benign(0.016)	-	-	NULL
ZNF567	163081	genome.wustl.edu	37	19	37210094	37210094	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152603.2	+1	provisional	p.R125	1.000	122	0%	51	43.1%	3	33.3%	-	-	-	NULL
ZNF567	163081	genome.wustl.edu	37	19	37211116	37211116	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152603.2	+1	provisional	p.R466Q	1.000	96	0%	57	42.1%	6	66.6%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF790	388536	genome.wustl.edu	37	19	37310117	37310117	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_206894.2	-1	validated	p.R377C	0.000	88	0%	47	46.8%	8	37.5%	probably_damaging(0.991)	tolerated(0.19)	deleterious(0.493)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF345	25850	genome.wustl.edu	37	19	37369069	37369069	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003419.3	+1	provisional	p.R446K	0.996	108	0%	54	38.9%	1	0%	benign(0)	tolerated(0.07)	neutral(0.319)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF420	147923	genome.wustl.edu	37	19	37619293	37619293	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144689.3	+1	provisional	p.R467Q	0.999	171	0%	60	40%	9	55.5%	probably_damaging(0.981)	tolerated(0.09)	deleterious(0.722)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF420	147923	genome.wustl.edu	37	19	37619782	37619782	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144689.3	+1	provisional	p.L630R	0.992	159	0.6%	68	42.6%	3	33.3%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF420	147923	genome.wustl.edu	37	19	37619946	37619946	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144689.3	+1	provisional	p.Q685*	0.080	86	0%	41	39%	1	0%	-	-	-	NULL
ZNF585A	199704	genome.wustl.edu	37	19	37643363	37643363	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152655.2	-1	validated	p.N425D	0.000	270	0%	138	27.5%	4	0%	benign(0)	tolerated(0.67)	neutral(0.003)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF585B	92285	genome.wustl.edu	37	19	37677066	37677066	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152279.3	-1	validated	p.R458Q	0.986	270	0%	153	42.5%	4	50%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF383	163087	genome.wustl.edu	37	19	37733621	37733621	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152604.1	+1	provisional	p.Q161	0.992	172	0%	71	16.9%	4	25%	-	-	-	superfamily_SSF57667
HKR1	284459	genome.wustl.edu	37	19	37853662	37853662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181786.2	+1	provisional	p.T322I	0.702	44	0%	34	23.5%	19	15.7%	benign(0.251)	tolerated(0.37)	neutral(0.044)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF527	84503	genome.wustl.edu	37	19	37879243	37879243	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032453.1	+1	validated	p.P98T	0.570	67	0%	51	31.4%	3	33.3%	probably_damaging(0.998)	tolerated(0.45)	deleterious(0.486)	NULL
ZNF527	84503	genome.wustl.edu	37	19	37880681	37880681	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032453.1	+1	validated	p.A577D	0.556	95	0%	38	50%	1	0%	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	superfamily_C2H2 and C2HC zinc fingers
ZNF570	148268	genome.wustl.edu	37	19	37974969	37974969	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144694.1	+1	provisional	p.E149K	0.994	279	0%	95	44.2%	0	-	possibly_damaging(0.807)	tolerated(0.87)	neutral(0.304)	NULL
ZNF570	148268	genome.wustl.edu	37	19	37975957	37975957	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144694.1	+1	provisional	p.A478D	0.987	176	0%	84	38.1%	5	20%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF540	163255	genome.wustl.edu	37	19	38103615	38103615	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152606.3	+1	validated	p.V478	0.000	187	0%	87	42.5%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFP30	22835	genome.wustl.edu	37	19	38126033	38126033	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014898.2	-1	validated	p.E470G	0.062	301	0%	128	43%	4	75%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP30	22835	genome.wustl.edu	37	19	38126592	38126592	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014898.2	-1	validated	p.H284Y	0.805	157	0%	72	37.5%	4	25%	probably_damaging(0.998)	tolerated(0.5)	deleterious(0.484)	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP30	22835	genome.wustl.edu	37	19	38127120	38127120	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014898.2	-1	validated	p.R108	0.965	122	0%	85	42.4%	3	66.6%	-	-	-	NULL
ZNF607	84775	genome.wustl.edu	37	19	38189106	38189106	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032689.4	-1	validated	p.G642	1.000	198	0%	108	43.5%	4	100%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF607	84775	genome.wustl.edu	37	19	38189158	38189158	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032689.4	-1	validated	p.A625V	0.491	178	0%	110	41.8%	3	33.3%	possibly_damaging(0.547)	tolerated(0.1)	deleterious(0.472)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
WDR87	83889	genome.wustl.edu	37	19	38383330	38383330	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031951.3	-1	provisional	p.K966E	0.994	184	0%	101	46.5%	0	-	possibly_damaging(0.794)	-	-	superfamily_WD40 repeat-like,superfamily_ARM repeat
WDR87	83889	genome.wustl.edu	37	19	38384921	38384921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031951.3	-1	provisional	p.E435D	0.054	38	0%	29	37.9%	0	-	benign(0.061)	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
WDR87	83889	genome.wustl.edu	37	19	38386888	38386888	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000447313	-1	known	p.F46L	0.975	92	1.1%	55	32.7%	0	-	benign(0.002)	-	-	NULL
SPINT2	10653	genome.wustl.edu	37	19	38780888	38780888	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021102.3	+1	reviewed	p.R174H	0.001	30	0%	19	36.8%	400	47%	benign(0.02)	tolerated(0.13)	neutral(0.254)	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like
C19orf33	64073	genome.wustl.edu	37	19	38795579	38795579	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033520.1	+1	provisional	p.G99D	0.000	88	0%	69	49.3%	4	0%	unknown(0)	-	-	NULL
KCNK6	9424	genome.wustl.edu	37	19	38817364	38817364	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004823.1	+1	reviewed	p.V152M	0.000	15	0%	16	37.5%	21	66.6%	benign(0.001)	tolerated(0.17)	neutral(0.059)	superfamily_Voltage-gated potassium channels
CATSPERG	57828	genome.wustl.edu	37	19	38850198	38850198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021185.4	+1	validated	p.A529T	0.006	33	0%	13	46.2%	0	-	probably_damaging(0.979)	tolerated(0.09)	deleterious(0.718)	NULL
CATSPERG	57828	genome.wustl.edu	37	19	38858328	38858328	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021185.4	+1	validated	p.L948M	0.938	89	0%	81	45.7%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
RASGRP4	115727	genome.wustl.edu	37	19	38904060	38904060	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170604.2	-1	reviewed	p.R429W	1.000	37	0%	45	42.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00147,superfamily_Ras GEF
RASGRP4	115727	genome.wustl.edu	37	19	38910638	38910638	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_170604.2	-1	reviewed	p.G175	0.974	20	0%	21	52.4%	1	0%	-	-	-	superfamily_Ras GEF
RYR1	6261	genome.wustl.edu	37	19	38979952	38979952	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000540.2	+1	reviewed	p.D1895N	0.983	72	0%	97	52.6%	0	-	benign(0.003)	-	-	NULL
MAP4K1	11184	genome.wustl.edu	37	19	39087674	39087674	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007181.4	-1	validated	p.R647	1.000	15	0%	19	36.8%	4	0%	-	-	-	HMMPfam_CNH,HMMSmart_CNH
CAPN12	147968	genome.wustl.edu	37	19	39225504	39225504	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144691.3	-1	validated	p.E565*	0.196	66	0%	59	47.5%	6	16.6%	-	-	-	superfamily_SSF47473
LGALS4	3960	genome.wustl.edu	37	19	39292533	39292533	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006149.3	-1	reviewed	p.G281	0.034	47	0%	40	40%	0	-	-	-	-	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases
HNRNPL	3191	genome.wustl.edu	37	19	39327415	39327415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001533.2	-1	reviewed	p.P573T	1.000	134	0%	114	48.2%	596	46.1%	benign(0.355)	tolerated(0.63)	neutral(0.116)	superfamily_SSF54928
PAPL	390928	genome.wustl.edu	37	19	39589173	39589173	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004318.2	+1	validated	p.P66L	0.055	20	0%	11	36.4%	0	-	benign(0)	tolerated(0.48)	neutral(0.011)	superfamily_Purple_Pase_N
LRFN1	57622	genome.wustl.edu	37	19	39804607	39804607	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020862.1	-1	validated	p.Q457R	1.000	22	0%	17	52.9%	4	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
PAF1	54623	genome.wustl.edu	37	19	39876813	39876813	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019088.2	-1	provisional	p.G472*	1.000	36	0%	50	42%	121	38.8%	-	-	-	NULL
PLEKHG2	64857	genome.wustl.edu	37	19	39913544	39913544	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022835.2	+1	validated	p.G617E	0.934	32	0%	33	24.2%	17	29.4%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
PLEKHG2	64857	genome.wustl.edu	37	19	39913577	39913577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022835.2	+1	validated	p.S628N	0.354	23	0%	27	22.2%	23	4.3%	benign(0)	tolerated(0.5)	neutral(0.010)	NULL
PLEKHG2	64857	genome.wustl.edu	37	19	39913866	39913866	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000205135	+1	known	p.R592H	0.000	31	0%	17	23.5%	20	10%	-	-	-	NULL
PLEKHG2	64857	genome.wustl.edu	37	19	39914566	39914566	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000205135	+1	known	p.T799M	0.000	21	0%	37	48.6%	35	54.2%	-	-	-	NULL
SUPT5H	6829	genome.wustl.edu	37	19	39944012	39944012	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111020.2	+1	validated	p.R31Q	0.980	29	0%	38	42.1%	90	37.7%	unknown(0)	tolerated(0.19)	-	NULL
SUPT5H	6829	genome.wustl.edu	37	19	39944154	39944154	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111020.2	+1	validated	p.D78	0.970	69	0%	51	43.1%	57	40.3%	-	-	-	NULL
SUPT5H	6829	genome.wustl.edu	37	19	39948357	39948357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111020.2	+1	validated	p.G95V	1.000	130	0%	84	39.3%	36	27.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SUPT5H	6829	genome.wustl.edu	37	19	39963546	39963546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111020.2	+1	validated	p.R711H	1.000	19	0%	14	57.1%	143	43.3%	probably_damaging(0.987)	deleterious(0.05)	deleterious(0.782)	HMMPfam_KOW,HMMSmart_SM00739,superfamily_Translation proteins SH3-like domain
SUPT5H	6829	genome.wustl.edu	37	19	39965324	39965324	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111020.2	+1	validated	p.V997A	1.000	21	0.000	9	0.444	156	44.2%	benign(0.01)	tolerated(0.11)	neutral(0.272)	NULL
DLL3	10683	genome.wustl.edu	37	19	39989619	39989619	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016941.3	+1	reviewed	p.V2A	0.251	20	0%	30	30%	0	-	benign(0.003)	deleterious(0)	neutral(0.445)	NULL
EID2B	126272	genome.wustl.edu	37	19	40023134	40023134	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152361.1	-1	provisional	p.S103R	0.006	5	0.000	9	0.444	1	0%	possibly_damaging(0.903)	tolerated(0.29)	neutral(0.387)	NULL
LOC148003	148003	genome.wustl.edu	37	19	40149250	40149250	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001721341.1	+1	model	p.V111	0.088	57	0%	31	12.9%	0	-	-	-	-	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases
LOC400696	400696	genome.wustl.edu	37	19	40172695	40172695	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207646.2	+1	validated	p.I50	0.005	49	0%	44	43.2%	0	-	-	-	-	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases
FBL	2091	genome.wustl.edu	37	19	40329693	40329693	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001436.3	-1	reviewed	p.V177	0.998	35	0%	39	51.3%	549	50%	-	-	-	HMMPfam_Fibrillarin,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
FCGBP	8857	genome.wustl.edu	37	19	40398474	40398474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003890.2	-1	validated	p.D2165Y	0.200	14	0.000	9	0.444	2	0%	unknown(0)	tolerated(0.06)	-	HMMPfam_VWD,HMMSmart_VWD
FCGBP	8857	genome.wustl.edu	37	19	40412112	40412112	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003890.2	-1	validated	p.C1172	0.994	6	0.000	7	0.714	1	0%	-	-	-	superfamily_Cysrich_TIL,HMMPfam_TIL
FCGBP	8857	genome.wustl.edu	37	19	40433589	40433589	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003890.2	-1	validated	p.S227I	1.000	16	0%	13	61.5%	0	-	probably_damaging(0.965)	deleterious(0.02)	deleterious(0.790)	NULL
ZNF546	339327	genome.wustl.edu	37	19	40520174	40520174	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178544.3	+1	validated	p.E333*	0.339	211	0%	100	45%	2	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF780B	163131	genome.wustl.edu	37	19	40540576	40540576	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005851.2	-1	validated	p.C730	1.000	96	0%	51	52.9%	1	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF780A	284323	genome.wustl.edu	37	19	40580687	40580687	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142577.1	-1	validated	p.K555N	0.999	245	0%	101	39.6%	3	66.6%	possibly_damaging(0.731)	deleterious(0.01)	deleterious(0.673)	superfamily_C2H2 and C2HC zinc fingers
ZNF780A	284323	genome.wustl.edu	37	19	40580834	40580834	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142577.1	-1	validated	p.E506D	0.001	134	0%	72	48.6%	1	0%	benign(0)	deleterious(0.04)	neutral(0.349)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF780A	284323	genome.wustl.edu	37	19	40580955	40580955	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142577.1	-1	validated	p.R466Q	0.005	235	0%	102	48%	6	33.3%	benign(0.08)	tolerated(0.13)	neutral(0.258)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
MAP3K10	4294	genome.wustl.edu	37	19	40698354	40698354	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002446.3	+1	reviewed	p.A139V	0.997	12	0%	24	54.2%	16	31.2%	benign(0.017)	tolerated(1)	neutral(0.001)	superfamily_Kinase_like,HMMPfam_Pkinase
AKT2	208	genome.wustl.edu	37	19	40741942	40741942	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001626.3	-1	reviewed	p.M344V	1.000	21	0%	32	37.5%	58	50%	benign(0)	tolerated(0.06)	neutral(0.323)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
AKT2	208	genome.wustl.edu	37	19	40748465	40748465	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001626.3	-1	reviewed	p.A139	0.016	12	0%	18	50%	56	53.5%	-	-	-	superfamily_Kinase_like
C19orf47	126526	genome.wustl.edu	37	19	40834444	40834444	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178830.2	-1	predicted	p.M75I	1.000	138	0%	159	48.4%	12	41.6%	probably_damaging(0.987)	tolerated(0.17)	deleterious(0.495)	NULL
HIPK4	147746	genome.wustl.edu	37	19	40889698	40889698	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144685.3	-1	provisional	p.E272K	0.985	17	0%	24	58.3%	0	-	benign(0.181)	tolerated(0.09)	neutral(0.313)	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
HIPK4	147746	genome.wustl.edu	37	19	40889744	40889744	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144685.3	-1	provisional	p.D256	0.011	20	0%	30	33.3%	0	-	-	-	-	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SPTBN4	57731	genome.wustl.edu	37	19	41009810	41009810	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020971.2	+1	reviewed	p.A479V	0.981	8	0.000	14	0.429	0	-	benign(0.006)	tolerated(0.5)	neutral(0.010)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTBN4	57731	genome.wustl.edu	37	19	41078001	41078001	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020971.2	+1	reviewed	p.G2466R	0.998	26	0%	22	36.4%	0	-	probably_damaging(0.964)	tolerated(0.09)	deleterious(0.703)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
SHKBP1	92799	genome.wustl.edu	37	19	41092803	41092803	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138392.3	+1	validated	p.R430H	1.000	10	0%	24	37.5%	77	44.1%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMSmart_SM00320,superfamily_WD40 repeat-like
LTBP4	8425	genome.wustl.edu	37	19	41119372	41119372	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000308370	+1	known	p.G899S	1.000	20	0%	28	42.9%	20	35%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	PatternScan_ASX_HYDROXYL,HMMSmart_EGF_CA,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_SSF57196
ITPKC	80271	genome.wustl.edu	37	19	41242949	41242949	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025194.2	+1	reviewed	p.T578I	0.990	55	0%	40	42.5%	15	40%	benign(0.296)	tolerated(0.19)	neutral(0.141)	HMMPfam_IPK,superfamily_SSF56104
C19orf54	284325	genome.wustl.edu	37	19	41255386	41255386	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198476.3	-1	validated	p.R108Q	1.000	16	0%	21	42.9%	5	0%	probably_damaging(0.989)	deleterious(0.05)	deleterious(0.785)	NULL
SNRPA	6626	genome.wustl.edu	37	19	41268930	41268930	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004596.4	+1	reviewed	p.A184V	1.000	10	0.000	7	0.571	185	41%	possibly_damaging(0.454)	tolerated(0.24)	neutral(0.186)	NULL
MIA	8190	genome.wustl.edu	37	19	41281666	41281666	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006533.2	+1	validated	p.S46F	1.000	43	0%	47	34%	5	60%	probably_damaging(1)	tolerated(0.66)	deleterious(0.502)	HMMSmart_SM00326,superfamily_SH3-domain
CYP2B7P1	1556	genome.wustl.edu	37	19	41447247	41447247	+	RNA	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_001278.1	+1	provisional	NULL	0.993	86	0%	58	37.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	-
CYP2B6	1555	genome.wustl.edu	37	19	41512847	41512847	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000767.4	+1	reviewed	p.I174	0.004	121	0%	88	40.9%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2B6	1555	genome.wustl.edu	37	19	41518256	41518256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000767.4	+1	reviewed	p.L340F	0.008	88	0%	50	10%	0	-	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2B6	1555	genome.wustl.edu	37	19	41518328	41518328	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000767.4	+1	reviewed	p.P364S	0.972	106	0%	47	40.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2B6	1555	genome.wustl.edu	37	19	41518600	41518600	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000767.4	+1	reviewed	p.L392M	0.969	189	0.5%	94	48.9%	0	-	possibly_damaging(0.951)	deleterious(0.01)	deleterious(0.800)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2B6	1555	genome.wustl.edu	37	19	41522580	41522580	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000767.4	+1	reviewed	p.A442T	0.988	32	0%	24	50%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2F1	1572	genome.wustl.edu	37	19	41627442	41627442	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000774.3	+1	reviewed	p.F188	1.000	42	0%	41	68.3%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP2S1	29785	genome.wustl.edu	37	19	41703707	41703707	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030622.6	+1	reviewed	p.R123W	0.963	44	0%	42	42.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome P450
HNRNPUL1	11100	genome.wustl.edu	37	19	41798372	41798372	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007040.3	+1	reviewed	p.R408C	1.000	102	0%	76	35.5%	235	43.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
EXOSC5	56915	genome.wustl.edu	37	19	41898806	41898806	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020158.3	-1	validated	p.L76	0.976	26	0%	28	17.9%	47	14.8%	-	-	-	HMMPfam_RNase_PH,superfamily_Ribosomal_S5_D2-typ_fold
CEACAM5	1048	genome.wustl.edu	37	19	42221378	42221378	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000398599	+1	known	p.A317T	0.000	117	0%	88	17%	2	0%	-	-	-	superfamily_Immunoglobulin
CEACAM6	4680	genome.wustl.edu	37	19	42260796	42260796	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002483.4	+1	validated	p.G118E	0.001	359	0%	227	36.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
CEACAM6	4680	genome.wustl.edu	37	19	42265156	42265156	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002483.4	+1	validated	e3-1	0.563	64	0%	53	37.7%	0	-	-	-	-	-
CEACAM6	4680	genome.wustl.edu	37	19	42265897	42265897	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002483.4	+1	validated	p.I242V	0.018	129	0%	81	42%	3	33.3%	benign(0.316)	deleterious(0.01)	deleterious(0.505)	superfamily_Immunoglobulin
DMRTC2	63946	genome.wustl.edu	37	19	42353287	42353287	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040283.1	+1	validated	p.S240P	0.988	86	0%	66	42.4%	0	-	possibly_damaging(0.803)	deleterious(0)	deleterious(0.747)	NULL
ARHGEF1	9138	genome.wustl.edu	37	19	42398354	42398354	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199002.1	+1	reviewed	p.S255L	0.977	28	0%	28	42.9%	36	44.4%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
ATP1A3	478	genome.wustl.edu	37	19	42471157	42471157	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000441343	-1	known	p.S1086Y	0.907	54	0%	36	50%	1	100%	unknown(0)	-	-	NULL
ATP1A3	478	genome.wustl.edu	37	19	42473005	42473005	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152296.3	-1	reviewed	p.V917	1.000	10	0%	18	44.4%	0	-	-	-	-	HMMPfam_Cation_ATPase_C,superfamily_SSF81665
GRIK5	2901	genome.wustl.edu	37	19	42561105	42561105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002088.3	-1	reviewed	p.A238V	1.000	73	1.4%	45	33.3%	0	-	benign(0.024)	tolerated(0.52)	neutral(0.010)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIK5	2901	genome.wustl.edu	37	19	42566665	42566665	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002088.3	-1	reviewed	p.A161	1.000	30	0%	17	23.5%	1	0%	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
DEDD2	162989	genome.wustl.edu	37	19	42719335	42719335	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133328.2	-1	provisional	p.R133H	0.638	26	0%	24	41.7%	13	53.8%	possibly_damaging(0.845)	tolerated(0.17)	neutral(0.383)	NULL
CIC	23152	genome.wustl.edu	37	19	42793224	42793224	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015125.3	+1	validated	p.A372	0.471	7	0.000	6	0.667	28	39.2%	-	-	-	NULL
CIC	23152	genome.wustl.edu	37	19	42794092	42794092	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015125.3	+1	validated	p.E485*	0.995	24	0%	33	36.4%	45	35.5%	-	-	-	NULL
MEGF8	1954	genome.wustl.edu	37	19	42867212	42867212	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001410.2	+1	validated	p.R1957H	1.000	24	0%	38	39.5%	21	47.6%	probably_damaging(0.956)	tolerated(0.08)	deleterious(0.700)	NULL
CEACAM8	1088	genome.wustl.edu	37	19	43093724	43093724	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001816.3	-1	validated	p.G196	0.480	267	0%	155	47.7%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
PSG3	5671	genome.wustl.edu	37	19	43242981	43242981	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021016.3	-1	validated	p.I109V	0.051	390	0.3%	226	41.2%	0	-	possibly_damaging(0.489)	deleterious(0.01)	deleterious(0.568)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
PSG1	5669	genome.wustl.edu	37	19	43372373	43372373	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006905.2	-1	validated	p.P375T	0.001	358	0%	180	49.4%	0	-	benign(0)	tolerated(0.05)	neutral(0.345)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
PSG1	5669	genome.wustl.edu	37	19	43382342	43382342	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006905.2	-1	validated	p.V51	0.150	468	0%	269	43.9%	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
ENSG00000204933	0	genome.wustl.edu	37	19	43883202	43883202	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000378007	-1	known	p.C25*	0.116	28	0%	24	62.5%	0	-	-	-	-	HMMPfam_UPAR_LY6
ETHE1	23474	genome.wustl.edu	37	19	44015657	44015657	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014297.3	-1	reviewed	p.D146G	1.000	19	0%	19	47.4%	71	42.2%	benign(0.047)	tolerated(0.17)	neutral(0.062)	HMMPfam_Lactamase_B,superfamily_SSF56281
XRCC1	7515	genome.wustl.edu	37	19	44047793	44047793	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006297.2	-1	reviewed	p.A587T	0.938	127	0%	92	44.6%	73	45.2%	possibly_damaging(0.916)	tolerated(0.41)	neutral(0.382)	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain
PLAUR	5329	genome.wustl.edu	37	19	44160690	44160690	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002659.2	-1	reviewed	p.R138H	0.056	55	0%	51	25.5%	24	20.8%	possibly_damaging(0.894)	tolerated(0.07)	deleterious(0.671)	HMMSmart_SM00134,PatternScan_LY6_UPAR,superfamily_Snake toxin-like
SMG9	56006	genome.wustl.edu	37	19	44251687	44251687	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019108.2	-1	validated	p.V165	0.984	41	0%	35	51.4%	13	46.1%	-	-	-	NULL
ZNF283	284349	genome.wustl.edu	37	19	44351433	44351433	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181845.1	+1	validated	p.R227I	0.998	82	0%	36	33.3%	2	0%	probably_damaging(0.972)	tolerated(0.1)	deleterious(0.700)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF404	342908	genome.wustl.edu	37	19	44377407	44377407	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001033719.2	-1	validated	p.S320N	0.986	139	0%	58	41.4%	1	0%	possibly_damaging(0.85)	deleterious(0)	deleterious(0.772)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF224	7767	genome.wustl.edu	37	19	44605025	44605025	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013398.2	+1	validated	p.Q29	0.999	238	0%	163	49.7%	10	30%	-	-	-	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF224	7767	genome.wustl.edu	37	19	44612125	44612125	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013398.2	+1	validated	p.G604	0.115	141	0%	88	42%	14	42.8%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF234	10780	genome.wustl.edu	37	19	44660560	44660560	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144824.1	+1	validated	p.S131T	0.000	69	0%	52	40.4%	0	-	benign(0)	tolerated(0.46)	neutral(0.012)	NULL
ZNF226	7769	genome.wustl.edu	37	19	44681628	44681628	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001032372.1	+1	validated	p.R738Q	0.617	291	0.3%	169	46.2%	9	100%	probably_damaging(0.992)	tolerated(0.58)	neutral(0.453)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF229	7772	genome.wustl.edu	37	19	44933946	44933946	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014518.2	-1	validated	p.R337H	0.000	49	2%	34	47.1%	0	-	benign(0)	tolerated(0.57)	neutral(0.006)	NULL
ZNF180	7733	genome.wustl.edu	37	19	44980824	44980824	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013256.3	-1	validated	p.R625I	0.994	280	0%	149	38.3%	4	50%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF180	7733	genome.wustl.edu	37	19	44980992	44980992	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013256.3	-1	validated	p.R569I	1.000	253	0%	141	49.6%	7	57.1%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF180	7733	genome.wustl.edu	37	19	44981328	44981328	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013256.3	-1	validated	p.R457I	1.000	203	0%	104	45.2%	10	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF180	7733	genome.wustl.edu	37	19	44982220	44982220	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013256.3	-1	validated	p.D160Y	0.006	360	0.3%	193	46.1%	5	0%	possibly_damaging(0.66)	deleterious(0.03)	deleterious(0.598)	NULL
PVR	5817	genome.wustl.edu	37	19	45161149	45161149	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006505.3	+1	reviewed	p.R321H	0.002	24	0%	20	45%	32	50%	benign(0.06)	tolerated(0.26)	neutral(0.038)	HMMSmart_SM00409,superfamily_Immunoglobulin
CEACAM16	388551	genome.wustl.edu	37	19	45211156	45211156	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039213.2	+1	validated	p.V381M	1.000	11	0.000	7	0.857	0	-	probably_damaging(0.995)	tolerated(0.11)	deleterious(0.729)	HMMPfam_V-set,superfamily_SSF48726
CEACAM16	388551	genome.wustl.edu	37	19	45211328	45211328	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039213.2	+1	validated	p.R438Q	1.000	8	0.000	12	0.750	0	-	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
PVRL2	5819	genome.wustl.edu	37	19	45381610	45381610	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002856.2	+1	reviewed	p.R391	1.000	8	0.000	11	0.455	48	47.9%	-	-	-	NULL
PVRL2	5819	genome.wustl.edu	37	19	45389419	45389419	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042724.1	+1	reviewed	p.S430	0.866	21	0%	30	43.3%	29	65.5%	-	-	-	NULL
PVRL2	5819	genome.wustl.edu	37	19	45391557	45391557	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042724.1	+1	reviewed	p.Y513C	0.972	79	0%	71	12.7%	18	11.1%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
APOE	348	genome.wustl.edu	37	19	45411112	45411112	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000041.2	+1	reviewed	p.A47T	0.187	7	0.000	6	0.667	167	3.5%	benign(0.134)	tolerated(0.43)	neutral(0.025)	superfamily_Apolipoprotein
RELB	5971	genome.wustl.edu	37	19	45537543	45537543	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006509.2	+1	validated	p.D417N	0.635	23	0%	25	44%	34	32.3%	possibly_damaging(0.84)	tolerated(0.12)	deleterious(0.582)	superfamily_Ig_E-set
CLASRP	11129	genome.wustl.edu	37	19	45561077	45561077	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007056.2	+1	validated	p.A178	0.000	56	0%	48	43.8%	44	45.4%	-	-	-	NULL
CKM	1158	genome.wustl.edu	37	19	45810897	45810897	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001824.2	-1	reviewed	p.I263	1.000	33	0%	25	44%	2	0%	-	-	-	HMMPfam_ATP-gua_Ptrans,superfamily_SSF55931
PPP1R13L	10848	genome.wustl.edu	37	19	45883481	45883481	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142502.1	-1	validated	p.F818	1.000	103	0%	67	44.8%	70	60%	-	-	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
RTN2	6253	genome.wustl.edu	37	19	45998141	45998141	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005619.3	-1	reviewed	p.A68T	1.000	5	0.000	11	0.455	1	0%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
MIR642A	693227	genome.wustl.edu	37	19	46178240	46178240	+	RNA	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000385039	+1	known	NULL	0.000	43	0%	41	24.4%	0	-	-	-	-	-
GIPR	2696	genome.wustl.edu	37	19	46180978	46180978	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000164.2	+1	validated	p.R289C	0.999	63	0%	68	47.1%	0	-	probably_damaging(0.999)	tolerated(0.11)	deleterious(0.762)	HMMPfam_7tm_2
SIX5	147912	genome.wustl.edu	37	19	46269097	46269097	+	Missense_Mutation	SNP	T	T	A	rs186636782		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175875.4	-1	reviewed	p.T628S	0.000	10	0%	14	35.7%	19	52.6%	benign(0.045)	deleterious(0.01)	neutral(0.408)	NULL
SIX5	147912	genome.wustl.edu	37	19	46269107	46269107	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175875.4	-1	reviewed	p.P624	0.000	12	0%	13	38.5%	24	45.8%	-	-	-	NULL
SIX5	147912	genome.wustl.edu	37	19	46269183	46269183	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175875.4	-1	reviewed	p.G599V	0.764	16	0%	21	66.7%	23	65.2%	benign(0.003)	deleterious(0)	neutral(0.445)	NULL
DMWD	1762	genome.wustl.edu	37	19	46289692	46289692	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004943.1	-1	validated	p.S354	1.000	10	0%	10	70%	21	52.3%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
RSPH6A	81492	genome.wustl.edu	37	19	46318389	46318389	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030785.3	-1	reviewed	p.P16S	0.000	6	0.000	9	0.444	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
SYMPK	8189	genome.wustl.edu	37	19	46352084	46352084	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004819.2	-1	reviewed	p.L117R	1.000	102	0%	74	32.4%	45	48.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HEAT,superfamily_ARM repeat
NOVA2	4858	genome.wustl.edu	37	19	46457193	46457193	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002516.2	-1	validated	p.R81W	0.994	113	0%	104	36.5%	1	0%	unknown(0)	deleterious(0)	-	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791
CCDC61	729440	genome.wustl.edu	37	19	46506288	46506288	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080402.1	+1	provisional	p.P61	0.352	31	0%	39	35.9%	4	25%	-	-	-	NULL
CCDC61	729440	genome.wustl.edu	37	19	46521626	46521626	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080402.1	+1	provisional	p.R526Q	0.637	13	0%	14	35.7%	9	66.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
MIR769	768217	genome.wustl.edu	37	19	46522269	46522269	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390225	+1	known	NULL	0.951	51	0%	44	40.9%	0	-	-	-	-	-
HIF3A	64344	genome.wustl.edu	37	19	46823750	46823750	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152795.2	+1	reviewed	p.H359R	0.574	17	0%	16	31.2%	0	-	possibly_damaging(0.918)	tolerated(0.34)	neutral(0.392)	NULL
PPP5C	5536	genome.wustl.edu	37	19	46878959	46878959	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006247.2	+1	provisional	p.G154	0.947	33	0%	20	50%	76	48.6%	-	-	-	HMMPfam_PPP5
CCDC8	83987	genome.wustl.edu	37	19	46914608	46914608	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032040.3	-1	validated	p.S487L	0.263	22	0%	32	37.5%	8	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CCDC8	83987	genome.wustl.edu	37	19	46914732	46914732	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032040.3	-1	validated	p.A446T	1.000	47	0%	38	34.2%	11	18.1%	probably_damaging(0.986)	tolerated(0.45)	neutral(0.447)	NULL
ENSG00000248985	0	genome.wustl.edu	37	19	46971526	46971526	+	RNA	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000503237	+1	novel	NULL	0.000	5	0.000	8	0.625	8	50%	-	-	-	-
DACT3	147906	genome.wustl.edu	37	19	47151980	47151980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145056.2	-1	validated	p.S550L	1.000	6	0.000	5	1.000	1	100%	benign(0.202)	deleterious(0)	neutral(0.464)	NULL
PRKD2	25865	genome.wustl.edu	37	19	47181765	47181765	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079880.1	-1	reviewed	p.Y742	0.993	23	0%	31	35.5%	110	44.5%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PRKD2	25865	genome.wustl.edu	37	19	47204103	47204103	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001079880.1	-1	reviewed	p.A358	0.946	11	0%	19	47.4%	38	63.1%	-	-	-	NULL
STRN4	29888	genome.wustl.edu	37	19	47223927	47223927	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039877.1	-1	validated	p.A739T	1.000	15	0%	19	47.4%	218	44.9%	possibly_damaging(0.926)	tolerated(0.06)	deleterious(0.697)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
SLC1A5	6510	genome.wustl.edu	37	19	47282001	47282001	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005628.2	-1	validated	p.R330H	1.000	70	0%	40	12.5%	33	3%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_SDF
ARHGAP35	2909	genome.wustl.edu	37	19	47422257	47422257	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004491.4	+1	reviewed	p.R109*	1.000	47	0%	43	37.2%	16	43.7%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
ARHGAP35	2909	genome.wustl.edu	37	19	47423986	47423986	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004491.4	+1	reviewed	p.T685M	0.999	62	0%	34	44.1%	15	46.6%	possibly_damaging(0.884)	deleterious(0.01)	deleterious(0.750)	NULL
ARHGAP35	2909	genome.wustl.edu	37	19	47424156	47424156	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004491.4	+1	reviewed	p.Y742H	1.000	155	0%	89	43.8%	34	52.9%	possibly_damaging(0.751)	tolerated(0.27)	neutral(0.309)	NULL
ARHGAP35	2909	genome.wustl.edu	37	19	47424604	47424604	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004491.4	+1	reviewed	p.G891D	0.493	132	0%	89	41.6%	25	36%	benign(0.124)	deleterious(0.01)	neutral(0.416)	NULL
ARHGAP35	2909	genome.wustl.edu	37	19	47424605	47424605	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004491.4	+1	reviewed	p.G891	0.361	129	0%	88	14.8%	24	29.1%	-	-	-	NULL
ARHGAP35	2909	genome.wustl.edu	37	19	47425583	47425583	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004491.4	+1	reviewed	p.N1217	0.991	33	0%	27	51.9%	35	54.2%	-	-	-	NULL
ZC3H4	23211	genome.wustl.edu	37	19	47597782	47597782	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015168.1	-1	validated	p.S82N	1.000	364	0%	306	12.7%	12	16.6%	unknown(0)	tolerated(0.27)	-	NULL
LOC100287311	100287311	genome.wustl.edu	37	19	47823235	47823235	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343688.1	-1	model	p.L97F	0.000	49	0%	48	39.6%	2	0%	-	-	-	NULL
DHX34	9704	genome.wustl.edu	37	19	47880359	47880359	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014681.5	+1	reviewed	p.D868N	0.809	16	0%	21	42.9%	27	44.4%	benign(0)	tolerated(0.6)	neutral(0.004)	HMMPfam_DUF1605
SLC8A2	6543	genome.wustl.edu	37	19	47935523	47935523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015063.2	-1	validated	p.A764T	1.000	17	0%	36	47.2%	0	-	possibly_damaging(0.898)	deleterious(0.02)	deleterious(0.738)	HMMPfam_Na_Ca_ex
KPTN	11133	genome.wustl.edu	37	19	47980092	47980092	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007059.2	-1	validated	p.R323W	0.121	13	0%	16	62.5%	16	50%	probably_damaging(0.977)	deleterious(0.01)	deleterious(0.825)	NULL
ZNF541	84215	genome.wustl.edu	37	19	48047910	48047910	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101419.1	-1	validated	p.R626C	0.994	7	0.000	12	0.417	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ZNF541	84215	genome.wustl.edu	37	19	48052662	48052662	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101419.1	-1	validated	p.R130W	1.000	86	1.2%	63	49.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TPRX1	284355	genome.wustl.edu	37	19	48305551	48305551	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198479.2	-1	validated	p.I239	0.000	39	0%	47	38.3%	0	-	-	-	-	NULL
SULT2A1	6822	genome.wustl.edu	37	19	48389436	48389436	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003167.3	-1	reviewed	p.R27C	0.000	331	0.3%	143	51.7%	0	-	benign(0.192)	tolerated(0.2)	neutral(0.067)	superfamily_P-loop containing nucleoside triphosphate hydrolases
PLA2G4C	8605	genome.wustl.edu	37	19	48558205	48558205	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003706.2	-1	reviewed	p.C453	0.458	61	0%	42	52.4%	2	0%	-	-	-	HMMSmart_PLAc,superfamily_Acyl_Trfase/lysoPlipase
ENSG00000250291	0	genome.wustl.edu	37	19	48603163	48603163	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000503308	+1	novel	NULL	0.000	27	0%	27	37%	0	-	-	-	-	-
LIG1	3978	genome.wustl.edu	37	19	48653361	48653361	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000234.1	-1	reviewed	p.T227	0.009	67	0%	50	36%	23	39.1%	-	-	-	NULL
LIG1	3978	genome.wustl.edu	37	19	48654559	48654559	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000234.1	-1	reviewed	p.E168D	0.001	102	0%	78	35.9%	27	55.5%	probably_damaging(0.996)	tolerated(0.16)	deleterious(0.521)	NULL
ZNF114	163071	genome.wustl.edu	37	19	48789288	48789288	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153608.1	+1	provisional	p.C136Y	0.000	62	0%	40	47.5%	5	40%	benign(0.337)	tolerated(0.12)	neutral(0.366)	NULL
ZNF114	163071	genome.wustl.edu	37	19	48789873	48789873	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153608.1	+1	provisional	p.P331L	0.815	149	0%	106	44.3%	1	100%	probably_damaging(0.981)	tolerated(0.81)	neutral(0.426)	superfamily_C2H2 and C2HC zinc fingers
TMEM143	55260	genome.wustl.edu	37	19	48866783	48866783	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018273.2	-1	provisional	p.R10Q	0.000	5	0.000	11	0.455	1	0%	benign(0)	tolerated(0.38)	neutral(0.018)	NULL
KDELR1	10945	genome.wustl.edu	37	19	48887509	48887509	+	Missense_Mutation	SNP	G	G	T	rs117156037	byFrequency;by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006801.2	-1	reviewed	p.F194L	1.000	20	0%	30	56.7%	342	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GRWD1	83743	genome.wustl.edu	37	19	48950007	48950007	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031485.3	+1	validated	p.E125D	0.979	82	0%	61	44.3%	21	42.8%	benign(0)	tolerated(0.82)	neutral(0.001)	superfamily_WD40 repeat-like
CYTH2	9266	genome.wustl.edu	37	19	48977463	48977463	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017457.4	+1	reviewed	p.A191V	0.998	11	0%	26	57.7%	107	45.7%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_Sec7,HMMSmart_SM00222,superfamily_Sec7 domain
CYTH2	9266	genome.wustl.edu	37	19	48981353	48981353	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017457.4	+1	reviewed	p.R280H	1.000	14	0%	20	25%	88	53.4%	probably_damaging(0.961)	deleterious(0.01)	deleterious(0.810)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
SULT2B1	6820	genome.wustl.edu	37	19	49094988	49094988	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_177973.1	+1	reviewed	p.G182	0.995	23	0%	27	51.9%	12	0%	-	-	-	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
FAM83E	54854	genome.wustl.edu	37	19	49104612	49104612	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017708.3	-1	validated	p.W397*	1.000	28	0%	21	28.6%	1	100%	-	-	-	NULL
SPHK2	56848	genome.wustl.edu	37	19	49132505	49132505	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020126.3	+1	provisional	p.A480	0.002	22	0%	16	25%	14	35.7%	-	-	-	NULL
IZUMO1	284359	genome.wustl.edu	37	19	49245500	49245500	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182575.2	-1	validated	p.A189V	0.000	83	0%	83	50.6%	0	-	benign(0.003)	tolerated(0.72)	neutral(0.002)	superfamily_Immunoglobulin
FGF21	26291	genome.wustl.edu	37	19	49259628	49259628	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019113.2	+1	reviewed	p.R45	0.388	16	0%	20	25%	0	-	-	-	-	HMMPfam_FGF,HMMSmart_FGF,superfamily_Cytok_IL1_like
BCAT2	587	genome.wustl.edu	37	19	49303279	49303279	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001190.3	-1	reviewed	p.G164S	0.553	10	0.000	8	0.625	27	51.8%	benign(0)	tolerated(0.29)	neutral(0.029)	HMMPfam_Aminotran_4,superfamily_D-aminoacid aminotransferase-like PLP-dependent enzymes
NUCB1	4924	genome.wustl.edu	37	19	49416383	49416383	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000424608	+1	known	p.E169*	1.000	66	0%	58	25.9%	190	31.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DHDH	27294	genome.wustl.edu	37	19	49438307	49438307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014475.3	+1	reviewed	p.Q47H	0.000	13	0%	11	36.4%	2	50%	benign(0.067)	deleterious(0.01)	neutral(0.410)	HMMPfam_GFO_IDH_MocA,superfamily_NAD(P)-bd
GYS1	2997	genome.wustl.edu	37	19	49477532	49477532	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002103.4	-1	reviewed	p.F496C	1.000	29	0%	17	35.3%	74	48.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glycogen_syn,superfamily_SSF53756
GYS1	2997	genome.wustl.edu	37	19	49496329	49496329	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002103.4	-1	reviewed	p.G14E	1.000	38	0%	28	39.3%	53	60.3%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	NULL
TEAD2	8463	genome.wustl.edu	37	19	49863247	49863247	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003598.1	-1	provisional	p.G29D	0.998	14	0%	19	36.8%	8	62.5%	probably_damaging(0.989)	tolerated(0.62)	neutral(0.444)	HMMPfam_TEA
SLC17A7	57030	genome.wustl.edu	37	19	49937253	49937253	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020309.3	-1	reviewed	p.Q230*	1.000	13	0%	13	53.8%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
ALDH16A1	126133	genome.wustl.edu	37	19	49965083	49965083	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000433981	+1	known	p.R262Q	0.000	10	0%	12	66.7%	0	-	-	-	-	superfamily_ALDH-like
RPS11	6205	genome.wustl.edu	37	19	50002863	50002863	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001015.3	+1	reviewed	p.G150S	0.997	7	0.000	13	0.385	3810	41.7%	benign(0.001)	tolerated(0.2)	neutral(0.049)	superfamily_Nucleic acid-binding proteins
NOSIP	51070	genome.wustl.edu	37	19	50062165	50062165	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015953.3	-1	provisional	p.R83W	1.000	74	0%	73	46.6%	122	45%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_SSF57850
RRAS	6237	genome.wustl.edu	37	19	50138848	50138848	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006270.3	-1	provisional	p.P214	1.000	28	0%	28	53.6%	65	33.8%	-	-	-	HMMSmart_SM00176,superfamily_P-loop containing nucleoside triphosphate hydrolases
CPT1C	126129	genome.wustl.edu	37	19	50210803	50210803	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152359.1	+1	provisional	p.V458I	0.971	72	0%	61	47.5%	9	44.4%	benign(0.002)	tolerated(0.49)	neutral(0.011)	HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_2,superfamily_CoA-dependent acyltransferases
AP2A1	160	genome.wustl.edu	37	19	50298988	50298988	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014203.2	+1	reviewed	p.P269	0.001	31	0%	46	15.2%	42	11.9%	-	-	-	HMMPfam_Adaptin_N,superfamily_ARM repeat
AP2A1	160	genome.wustl.edu	37	19	50303356	50303356	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014203.2	+1	reviewed	p.I468	0.999	19	0%	22	27.3%	98	37.7%	-	-	-	HMMPfam_Adaptin_N,superfamily_ARM repeat
ATF5	22809	genome.wustl.edu	37	19	50436128	50436128	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012068.4	+1	validated	p.R210C	1.000	27	0%	21	33.3%	28	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_BRLZ,HMMPfam_bZIP_1
ATF5	22809	genome.wustl.edu	37	19	50436159	50436159	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012068.4	+1	validated	p.S220L	0.999	23	0%	13	61.5%	39	23%	possibly_damaging(0.925)	deleterious(0.01)	deleterious(0.779)	HMMSmart_BRLZ,HMMPfam_bZIP_1
VRK3	51231	genome.wustl.edu	37	19	50498121	50498121	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016440.3	-1	reviewed	p.P274S	0.046	16	0%	13	38.5%	28	64.2%	possibly_damaging(0.952)	tolerated(0.77)	neutral(0.397)	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
ZNF473	25888	genome.wustl.edu	37	19	50548147	50548147	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006656.1	+1	validated	p.S149	0.000	51	0%	40	55%	5	80%	-	-	-	NULL
ZNF473	25888	genome.wustl.edu	37	19	50549816	50549816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006656.1	+1	validated	p.E706K	0.346	72	0%	55	47.3%	5	0%	probably_damaging(0.983)	deleterious(0.04)	deleterious(0.778)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
MYH14	79784	genome.wustl.edu	37	19	50775844	50775844	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077186.1	+1	reviewed	p.R1075H	1.000	15	0%	20	50%	24	58.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
POLD1	5424	genome.wustl.edu	37	19	50917040	50917040	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002691.2	+1	validated	p.G764	0.178	27	0%	20	25%	53	15%	-	-	-	HMMPfam_DNA_pol_B,HMMSmart_POLBc,superfamily_SSF56672
ASPDH	554235	genome.wustl.edu	37	19	51017052	51017052	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114598.1	-1	validated	p.G10D	0.751	32	0%	31	38.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_NAD(P)-bd
LRRC4B	94030	genome.wustl.edu	37	19	51022595	51022595	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080457.1	-1	provisional	p.I125	1.000	15	0%	13	38.5%	0	-	-	-	-	HMMPfam_LRR_1,superfamily_SSF52058
SYT3	84258	genome.wustl.edu	37	19	51129184	51129184	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032298.2	-1	validated	p.L458I	1.000	42	0%	38	34.2%	0	-	possibly_damaging(0.907)	deleterious(0)	deleterious(0.805)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
SYT3	84258	genome.wustl.edu	37	19	51136012	51136012	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032298.2	-1	validated	p.G69C	1.000	45	0%	40	22.5%	2	0%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	NULL
KLK4	9622	genome.wustl.edu	37	19	51413934	51413934	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004917.3	-1	reviewed	p.G21*	0.998	80	0%	67	41.8%	0	-	-	-	-	NULL
KLK6	5653	genome.wustl.edu	37	19	51470537	51470537	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012964.1	-1	reviewed	p.D29N	0.000	42	0%	39	38.5%	0	-	benign(0)	tolerated(0.49)	neutral(0.011)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
KLK8	11202	genome.wustl.edu	37	19	51503344	51503344	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144505.1	-1	reviewed	p.S179Y	0.001	60	0%	53	49.1%	0	-	benign(0.126)	tolerated(0.18)	neutral(0.067)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
KLK11	11012	genome.wustl.edu	37	19	51527315	51527315	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144947.1	-1	reviewed	p.T182M	1.000	12	0%	15	26.7%	22	45.4%	possibly_damaging(0.685)	deleterious(0)	deleterious(0.689)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
KLK12	43849	genome.wustl.edu	37	19	51537370	51537370	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019598.2	-1	reviewed	p.K21N	0.691	16	0%	21	47.6%	0	-	unknown(0)	-	-	HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
SIGLEC7	27036	genome.wustl.edu	37	19	51645721	51645721	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014385.2	+1	validated	p.S32N	0.000	39	0%	45	42.2%	0	-	benign(0.004)	tolerated(0.17)	neutral(0.059)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
VSIG10L	147645	genome.wustl.edu	37	19	51837448	51837448	+	Missense_Mutation	SNP	G	G	A	rs181926303	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000335624	-1	known	p.R361C	0.001	14	0%	13	30.8%	1	100%	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	NULL
VSIG10L	147645	genome.wustl.edu	37	19	51841219	51841219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000335624	-1	known	p.A213V	0.929	39	0%	26	57.7%	0	-	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	superfamily_Immunoglobulin
NKG7	4818	genome.wustl.edu	37	19	51875060	51875060	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005601.3	-1	validated	p.G157S	0.000	63	0%	66	13.6%	19	0%	benign(0)	tolerated(0.65)	neutral(0.003)	NULL
SIGLEC12	89858	genome.wustl.edu	37	19	52004982	52004982	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053003.2	-1	reviewed	p.L2	0.347	24	0%	24	41.7%	0	-	-	-	-	NULL
ZNF175	7728	genome.wustl.edu	37	19	52091152	52091152	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007147.2	+1	validated	p.K523R	1.000	110	0%	40	65%	5	20%	benign(0.012)	tolerated(0.75)	neutral(0.002)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SIGLEC5	8778	genome.wustl.edu	37	19	52129344	52129344	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003830.2	-1	validated	p.A469T	0.000	144	0%	83	60.2%	0	-	benign(0.128)	tolerated(0.5)	neutral(0.021)	NULL
FPR1	2357	genome.wustl.edu	37	19	52249968	52249968	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002029.3	-1	validated	p.G94S	1.000	61	0%	43	53.5%	2	0%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZNF613	79898	genome.wustl.edu	37	19	52443540	52443540	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031721.3	+1	validated	p.L32M	1.000	86	0%	45	42.2%	8	75%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF613	79898	genome.wustl.edu	37	19	52443578	52443578	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031721.3	+1	validated	p.L44	0.976	90	0%	52	42.3%	11	18.1%	-	-	-	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF350	59348	genome.wustl.edu	37	19	52468408	52468408	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021632.3	-1	validated	p.K433T	0.000	87	0%	43	44.2%	5	40%	benign(0)	tolerated(0.16)	neutral(0.059)	NULL
ZNF350	59348	genome.wustl.edu	37	19	52469194	52469194	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021632.3	-1	validated	p.R171Q	0.001	295	0%	154	42.2%	8	37.5%	benign(0.001)	tolerated(0.63)	neutral(0.004)	NULL
ZNF615	284370	genome.wustl.edu	37	19	52496175	52496175	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198480.2	-1	provisional	p.A718	0.001	283	0%	139	49.6%	3	33.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF615	284370	genome.wustl.edu	37	19	52505077	52505077	+	Missense_Mutation	SNP	C	C	T	rs187580863	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198480.2	-1	provisional	p.R76Q	0.000	218	0.5%	125	41.6%	1	100%	benign(0)	tolerated(1)	-	NULL
ZNF614	80110	genome.wustl.edu	37	19	52519532	52519532	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025040.3	-1	validated	p.R440H	0.000	185	0%	92	41.3%	1	100%	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ENSG00000249246	0	genome.wustl.edu	37	19	52562238	52562238	+	RNA	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000514408	-1	known	NULL	0.001	152	0%	55	32.7%	1	0%	-	-	-	-
ZNF841	284371	genome.wustl.edu	37	19	52568528	52568528	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136499.1	-1	validated	p.R869	0.226	379	0%	219	38.4%	14	42.8%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF841	284371	genome.wustl.edu	37	19	52569465	52569465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136499.1	-1	validated	p.S557L	0.000	153	0%	78	39.7%	9	33.3%	possibly_damaging(0.658)	tolerated(0.34)	neutral(0.256)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF836	162962	genome.wustl.edu	37	19	52658333	52658333	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102657.1	-1	provisional	p.G868D	0.706	342	0%	173	43.4%	4	50%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF836	162962	genome.wustl.edu	37	19	52658529	52658529	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102657.1	-1	provisional	p.E803K	1.000	109	0%	73	41.1%	8	25%	benign(0.088)	tolerated(0.12)	neutral(0.267)	superfamily_SSF57667
ZNF766	90321	genome.wustl.edu	37	19	52793541	52793541	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010851.2	+1	validated	p.N166T	0.000	116	0%	86	51.2%	6	33.3%	probably_damaging(0.96)	deleterious(0.01)	deleterious(0.808)	superfamily_C2H2 and C2HC zinc fingers
ZNF766	90321	genome.wustl.edu	37	19	52794170	52794170	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010851.2	+1	validated	p.N376H	0.015	131	0%	93	43%	5	20%	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF766	90321	genome.wustl.edu	37	19	52794310	52794310	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010851.2	+1	validated	p.Q422	0.000	204	0%	103	48.5%	11	36.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF480	147657	genome.wustl.edu	37	19	52817507	52817507	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144684.2	+1	validated	p.E58D	1.000	143	0%	73	35.6%	9	22.2%	probably_damaging(0.973)	tolerated(0.07)	deleterious(0.734)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF610	162963	genome.wustl.edu	37	19	52869134	52869134	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173530.2	+1	validated	p.S168Y	0.018	136	0%	92	45.7%	4	100%	benign(0.001)	tolerated(1)	-	NULL
ZNF880	400713	genome.wustl.edu	37	19	52887393	52887393	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145434.1	+1	validated	p.N187I	0.009	103	0%	64	42.2%	2	100%	possibly_damaging(0.722)	tolerated(0.12)	deleterious(0.522)	superfamily_C2H2 and C2HC zinc fingers
ZNF528	84436	genome.wustl.edu	37	19	52919387	52919387	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032423.2	+1	validated	p.R428*	0.000	160	0%	86	51.2%	5	60%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF534	147658	genome.wustl.edu	37	19	52937243	52937243	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143939.1	+1	validated	p.F17L	0.999	192	0%	134	38.1%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZNF534	147658	genome.wustl.edu	37	19	52941730	52941730	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143939.1	+1	validated	p.S352	0.000	131	0%	73	32.9%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF534	147658	genome.wustl.edu	37	19	52941915	52941915	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143939.1	+1	validated	p.R414M	0.001	125	0%	74	43.2%	0	-	possibly_damaging(0.945)	deleterious(0.02)	deleterious(0.772)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF534	147658	genome.wustl.edu	37	19	52942328	52942328	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143939.1	+1	validated	p.R552*	0.000	138	0%	94	37.2%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF701	55762	genome.wustl.edu	37	19	53085969	53085969	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018260.2	+1	validated	p.E219	0.546	151	0%	87	39.1%	0	-	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF83	55769	genome.wustl.edu	37	19	53117024	53117024	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105549.1	-1	validated	p.V265A	0.002	122	0%	29	17.2%	32	3.1%	benign(0.005)	tolerated(0.08)	neutral(0.300)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF600	162966	genome.wustl.edu	37	19	53270300	53270300	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198457.2	-1	validated	p.R237C	0.000	291	0%	146	50%	4	50%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000245472	0	genome.wustl.edu	37	19	53342932	53342932	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000500065	+1	novel	NULL	0.000	67	0%	33	42.4%	6	33.3%	-	-	-	-
LOC388559	388559	genome.wustl.edu	37	19	53410349	53410349	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_496322.5	-1	model	p.P391H	0.907	164	0%	92	46.7%	8	75%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF816	125893	genome.wustl.edu	37	19	53453206	53453206	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031665.1	-1	validated	p.L608I	0.079	277	0%	137	12.4%	10	20%	probably_damaging(0.997)	tolerated(0.06)	deleterious(0.788)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF160	90338	genome.wustl.edu	37	19	53571909	53571909	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001102603.1	-1	reviewed	p.C626	1.000	128	0%	55	36.4%	20	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF665	79788	genome.wustl.edu	37	19	53668018	53668018	+	Silent	SNP	G	G	A	rs184736845	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024733.3	-1	provisional	p.C575	0.668	278	0%	164	35.4%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF665	79788	genome.wustl.edu	37	19	53668357	53668357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024733.3	-1	provisional	p.D462E	0.001	126	0.8%	77	44.2%	2	50%	benign(0)	tolerated(1)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF677	342926	genome.wustl.edu	37	19	53747144	53747144	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182609.2	-1	provisional	p.F8V	0.072	167	0%	76	14.5%	9	0%	benign(0.001)	tolerated(0.71)	neutral(0.002)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZNF845	91664	genome.wustl.edu	37	19	53854584	53854584	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138374.1	+1	validated	p.E219V	0.008	317	0.3%	114	50%	2	50%	possibly_damaging(0.646)	tolerated(0.22)	neutral(0.269)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF765	91661	genome.wustl.edu	37	19	53905342	53905342	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040185.1	+1	provisional	p.A14T	0.937	345	0%	205	38.5%	5	0%	possibly_damaging(0.947)	tolerated(0.06)	deleterious(0.713)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF761	388561	genome.wustl.edu	37	19	53952848	53952848	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008401.3	+1	validated	p.Y33	0.769	165	0%	95	31.6%	4	0%	-	-	-	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF813	126017	genome.wustl.edu	37	19	53993887	53993887	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004301.3	+1	validated	p.K134T	0.601	241	0%	115	50.4%	4	75%	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	NULL
ZNF813	126017	genome.wustl.edu	37	19	53993903	53993903	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004301.3	+1	validated	p.Q139H	0.000	243	0%	120	41.7%	5	20%	probably_damaging(0.991)	tolerated(0.08)	deleterious(0.744)	NULL
ZNF813	126017	genome.wustl.edu	37	19	53994335	53994335	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004301.3	+1	validated	p.T283	0.000	176	0%	65	41.5%	1	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
MIR516A2	574499	genome.wustl.edu	37	19	54264388	54264388	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384888	+1	known	NULL	0.108	115	0%	64	34.4%	0	-	-	-	-	-
NLRP12	91662	genome.wustl.edu	37	19	54297342	54297342	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144687.2	-1	reviewed	p.A1049	0.000	95	0%	90	47.8%	0	-	-	-	-	superfamily_RNI-like
PRKCG	5582	genome.wustl.edu	37	19	54385907	54385907	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002739.3	+1	reviewed	p.T53	1.000	9	0.000	14	0.643	0	-	-	-	-	HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_SSF57889
PRKCG	5582	genome.wustl.edu	37	19	54395880	54395880	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002739.3	+1	reviewed	p.K268	0.983	10	0%	15	33.3%	1	0%	-	-	-	HMMSmart_C2,superfamily_C2_CaLB
CACNG7	59284	genome.wustl.edu	37	19	54444741	54444741	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031896.3	+1	reviewed	p.G148S	1.000	63	0%	78	41%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PMP22_Claudin
PRPF31	26121	genome.wustl.edu	37	19	54625261	54625261	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015629.3	+1	reviewed	p.A87	1.000	16	0%	15	53.3%	98	41.8%	-	-	-	NULL
PRPF31	26121	genome.wustl.edu	37	19	54627197	54627197	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015629.3	+1	reviewed	p.A199	1.000	11	0%	18	50%	120	58.3%	-	-	-	HMMPfam_Nop,superfamily_Nop domain
LOC100288135	100288135	genome.wustl.edu	37	19	54629886	54629886	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343695.1	-1	model	p.T396M	0.000	19	0%	24	41.7%	1	0%	-	-	-	NULL
PRPF31	26121	genome.wustl.edu	37	19	54632542	54632542	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015629.3	+1	reviewed	p.R419S	1.000	16	0.000	9	0.444	100	49%	benign(0.065)	tolerated(0.11)	neutral(0.276)	HMMPfam_Prp31_C
CNOT3	4849	genome.wustl.edu	37	19	54651894	54651894	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014516.2	+1	validated	p.K302N	1.000	18	0%	27	25.9%	77	23.3%	benign(0.348)	tolerated(0.06)	neutral(0.432)	NULL
MBOAT7	79143	genome.wustl.edu	37	19	54677785	54677785	+	Missense_Mutation	SNP	C	C	A	rs187952084	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024298.3	-1	reviewed	p.A458S	0.032	4	0.000	12	0.333	80	45%	benign(0)	tolerated(0.11)	neutral(0.272)	NULL
TSEN34	79042	genome.wustl.edu	37	19	54697089	54697089	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077446.2	+1	reviewed	p.I269V	0.995	27	0%	33	39.4%	129	37.9%	benign(0.003)	tolerated(0.07)	neutral(0.319)	HMMPfam_tRNA_int_endo,superfamily_tRNA_int_endo_C
LILRA6	79168	genome.wustl.edu	37	19	54744395	54744395	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024318.2	-1	validated	p.G338E	0.039	81	0%	83	25.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
LILRA6	79168	genome.wustl.edu	37	19	54744862	54744862	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024318.2	-1	validated	p.R267H	0.000	126	0%	126	15.1%	0	-	benign(0.26)	tolerated(0.86)	neutral(0.028)	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
LILRB4	11006	genome.wustl.edu	37	19	55179163	55179163	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006847.3	+1	reviewed	p.A373	0.010	141	0%	97	36.1%	8	0%	-	-	-	NULL
KIR3DL3	115653	genome.wustl.edu	37	19	55247494	55247494	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153443.3	+1	reviewed	p.V388	0.000	271	0%	201	45.8%	0	-	-	-	-	NULL
KIR2DL4	3805	genome.wustl.edu	37	19	55324733	55324733	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000396289	+1	known	p.A287V	0.000	118	0%	94	76.6%	0	-	possibly_damaging(0.741)	deleterious(0)	deleterious(0.716)	NULL
KIR2DS4	3809	genome.wustl.edu	37	19	55349208	55349208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000339924	+1	known	p.A83D	0.001	514	0%	325	42.2%	1	0%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_ig,superfamily_Immunoglobulin
KIR3DL2	3812	genome.wustl.edu	37	19	55363536	55363536	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006737.2	+1	reviewed	p.R52C	0.000	122	0%	101	42.6%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
NLRP7	199713	genome.wustl.edu	37	19	55435185	55435185	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127255.1	-1	reviewed	p.E1013*	0.021	344	0%	161	27.3%	0	-	-	-	-	superfamily_RNI-like
NLRP7	199713	genome.wustl.edu	37	19	55451742	55451742	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127255.1	-1	reviewed	p.D149N	0.000	25	0%	26	50%	0	-	benign(0.003)	tolerated(0.49)	neutral(0.011)	superfamily_P-loop containing nucleoside triphosphate hydrolases
NLRP2	55655	genome.wustl.edu	37	19	55505638	55505638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017852.3	+1	validated	p.L904F	0.630	287	0%	204	40.2%	38	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00368,superfamily_RNI-like
EPS8L1	54869	genome.wustl.edu	37	19	55598958	55598958	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133180.2	+1	reviewed	p.G716	0.018	93	0%	72	50%	41	53.6%	-	-	-	NULL
SYT5	6861	genome.wustl.edu	37	19	55687421	55687421	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003180.2	-1	validated	p.E108	0.721	70	0%	72	44.4%	1	0%	-	-	-	superfamily_C2_CaLB
BRSK1	84446	genome.wustl.edu	37	19	55815073	55815073	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032430.1	+1	validated	p.R389C	1.000	34	0%	45	17.8%	33	24.2%	possibly_damaging(0.693)	deleterious(0)	deleterious(0.693)	NULL
TMEM150B	284417	genome.wustl.edu	37	19	55831780	55831780	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001085488.1	-1	provisional	p.L59F	0.717	50	0%	53	43.4%	0	-	probably_damaging(0.998)	tolerated(0.12)	deleterious(0.735)	HMMPfam_Frag1
FAM71E2	284418	genome.wustl.edu	37	19	55871055	55871055	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145402.1	-1	predicted	p.P394L	0.000	18	0%	21	42.9%	0	-	benign(0.001)	deleterious(0.02)	neutral(0.383)	NULL
ZNF628	89887	genome.wustl.edu	37	19	55993064	55993064	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033113.2	+1	validated	p.H164	0.716	8	0.000	11	0.545	17	47%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SSC5D	284297	genome.wustl.edu	37	19	56011251	56011251	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144950.1	+1	provisional	p.R592W	0.006	34	0%	33	36.4%	1	0%	possibly_damaging(0.864)	deleterious(0.01)	deleterious(0.740)	NULL
SBK2	646643	genome.wustl.edu	37	19	56047439	56047439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001101401.1	-1	provisional	p.R75C	0.991	4	0.000	16	0.750	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
ZNF524	147807	genome.wustl.edu	37	19	56113511	56113511	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153219.2	+1	validated	p.S11	0.998	9	0.000	7	0.571	14	21.4%	-	-	-	NULL
CCDC106	29903	genome.wustl.edu	37	19	56163972	56163972	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013301.2	+1	validated	p.E235K	1.000	7	0.000	13	0.308	47	53.1%	possibly_damaging(0.791)	tolerated(0.15)	deleterious(0.537)	NULL
EPN1	29924	genome.wustl.edu	37	19	56204369	56204369	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130071.1	+1	validated	p.L496	0.992	13	0%	14	50%	132	46.2%	-	-	-	NULL
EPN1	29924	genome.wustl.edu	37	19	56206141	56206141	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001130071.1	+1	validated	p.A524	0.125	6	0.000	18	0.500	110	47.2%	-	-	-	NULL
NLRP11	204801	genome.wustl.edu	37	19	56300756	56300756	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_145007.3	-1	validated	p.G841	0.000	162	0%	108	45.4%	0	-	-	-	-	HMMSmart_SM00368,superfamily_RNI-like
NLRP4	147945	genome.wustl.edu	37	19	56392887	56392887	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_134444.4	+1	validated	p.E973D	0.000	85	0%	35	42.9%	0	-	possibly_damaging(0.903)	tolerated(0.48)	neutral(0.368)	superfamily_RNI-like
NLRP13	126204	genome.wustl.edu	37	19	56419174	56419174	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176810.2	-1	validated	p.N811D	0.043	41	0%	23	39.1%	0	-	benign(0.238)	tolerated(0.56)	neutral(0.030)	superfamily_SSF52047
NLRP13	126204	genome.wustl.edu	37	19	56435286	56435286	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_176810.2	-1	validated	p.E173*	0.025	332	0%	145	41.4%	0	-	-	-	-	NULL
NLRP5	126206	genome.wustl.edu	37	19	56552422	56552422	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153447.4	+1	reviewed	p.S974F	0.000	56	0%	38	52.6%	0	-	benign(0.005)	tolerated(0.26)	neutral(0.034)	superfamily_SSF52047
NLRP5	126206	genome.wustl.edu	37	19	56565133	56565133	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153447.4	+1	reviewed	p.C1086	0.014	53	0%	51	45.1%	0	-	-	-	-	superfamily_SSF52047
LOC646698	646698	genome.wustl.edu	37	19	56757813	56757813	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001725568.1	+1	model	p.E236D	0.001	44	0%	34	29.4%	0	-	-	-	-	NULL
LOC646698	646698	genome.wustl.edu	37	19	56758198	56758198	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001725568.1	+1	model	p.E276*	0.051	97	0%	87	43.7%	0	-	-	-	-	NULL
LOC646698	646698	genome.wustl.edu	37	19	56758796	56758796	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001725568.1	+1	model	p.R475Q	0.003	21	0%	12	33.3%	1	100%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF582	147948	genome.wustl.edu	37	19	56895856	56895856	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144690.1	-1	provisional	p.P310	0.002	96	0%	37	40.5%	1	0%	-	-	-	superfamily_SSF57667
ZNF583	147949	genome.wustl.edu	37	19	56935562	56935562	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152478.2	+1	validated	p.R512I	0.615	204	0%	70	48.6%	5	80%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF667	63934	genome.wustl.edu	37	19	56953625	56953625	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022103.3	-1	validated	p.H247N	0.002	232	0%	111	51.4%	1	0%	benign(0)	tolerated(0.05)	neutral(0.345)	HMMSmart_SM00355
ZNF667	63934	genome.wustl.edu	37	19	56953901	56953901	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022103.3	-1	validated	p.R155*	0.000	228	0.4%	94	39.4%	1	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFP28	140612	genome.wustl.edu	37	19	57065163	57065163	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020828.1	+1	provisional	p.E337*	0.011	141	0%	66	42.4%	1	0%	-	-	-	NULL
ZNF470	388566	genome.wustl.edu	37	19	57086064	57086064	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001668.3	+1	validated	p.W82*	0.260	214	0%	104	40.4%	4	50%	-	-	-	HMMSmart_KRAB
ZIM2	23619	genome.wustl.edu	37	19	57286450	57286450	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015363.4	-1	reviewed	p.A397V	0.000	57	0%	36	44.4%	0	-	unknown(0)	deleterious(0.03)	-	superfamily_SSF57667
PEG3	5178	genome.wustl.edu	37	19	57326784	57326784	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006210.2	-1	reviewed	p.S1009N	0.320	102	0%	48	37.5%	0	-	probably_damaging(0.996)	tolerated(0.1)	deleterious(0.748)	NULL
PEG3	5178	genome.wustl.edu	37	19	57326965	57326965	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006210.2	-1	reviewed	p.T949A	0.945	163	0%	60	33.3%	0	-	benign(0.291)	tolerated(0.43)	neutral(0.103)	NULL
PEG3	5178	genome.wustl.edu	37	19	57327849	57327849	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006210.2	-1	reviewed	p.P654Q	0.528	177	0%	56	57.1%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	superfamily_C2H2 and C2HC zinc fingers
USP29	57663	genome.wustl.edu	37	19	57640712	57640712	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020903.2	+1	validated	p.K223	0.000	94	0%	52	61.5%	0	-	-	-	-	NULL
ZIM3	114026	genome.wustl.edu	37	19	57646709	57646709	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052882.1	-1	provisional	p.E332D	1.000	363	0%	164	41.5%	0	-	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	superfamily_SSF57667
DUXA	503835	genome.wustl.edu	37	19	57669826	57669826	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012729.1	-1	validated	p.R103Q	0.057	112	0%	82	46.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like
ZNF264	9422	genome.wustl.edu	37	19	57724113	57724113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003417.4	+1	reviewed	p.R550C	0.629	109	0%	65	44.6%	3	66.6%	probably_damaging(1)	tolerated(0.18)	deleterious(0.556)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF304	57343	genome.wustl.edu	37	19	57865100	57865100	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020657.2	+1	validated	p.V14A	0.964	158	0%	115	18.3%	5	0%	possibly_damaging(0.892)	deleterious(0.01)	deleterious(0.757)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF548	147694	genome.wustl.edu	37	19	57908527	57908527	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152909.3	+1	validated	p.L43I	0.001	255	0%	155	45.8%	5	60%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF17	7565	genome.wustl.edu	37	19	57932608	57932608	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006959.2	+1	validated	p.K583R	0.000	157	0%	64	46.9%	2	50%	possibly_damaging(0.472)	tolerated(0.24)	neutral(0.194)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF749	388567	genome.wustl.edu	37	19	57956042	57956042	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001023561.2	+1	provisional	p.R509Q	0.000	101	0%	64	40.6%	7	42.8%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_C2H2 and C2HC zinc fingers
ZNF773	374928	genome.wustl.edu	37	19	58018236	58018236	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198542.1	+1	provisional	p.R258H	0.016	177	0%	114	43.9%	3	0%	benign(0.101)	tolerated(0.82)	neutral(0.008)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF549	256051	genome.wustl.edu	37	19	58049983	58049983	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153263.1	+1	provisional	p.V524	0.074	83	0%	63	47.6%	3	66.6%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF549	256051	genome.wustl.edu	37	19	58050267	58050267	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153263.1	+1	provisional	p.Q619P	0.517	43	0%	28	57.1%	6	66.6%	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF550	162972	genome.wustl.edu	37	19	58059176	58059176	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039654.1	-1	provisional	p.L105I	0.000	189	0%	100	42%	8	25%	benign(0.004)	tolerated(0.4)	neutral(0.016)	NULL
ZNF416	55659	genome.wustl.edu	37	19	58084718	58084718	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017879.1	-1	provisional	p.G185D	0.001	153	0%	84	38.1%	1	100%	benign(0.012)	tolerated(0.57)	neutral(0.007)	NULL
ZNF551	90233	genome.wustl.edu	37	19	58198728	58198728	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138347.3	+1	validated	p.P346H	0.985	76	0%	47	46.8%	2	50%	probably_damaging(0.995)	tolerated(0.05)	deleterious(0.803)	superfamily_C2H2 and C2HC zinc fingers
ZNF776	284309	genome.wustl.edu	37	19	58264939	58264939	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173632.3	+1	validated	p.K147	0.000	64	0%	41	39%	4	75%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF552	79818	genome.wustl.edu	37	19	58319720	58319720	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024762.3	-1	validated	p.F304L	0.022	193	0%	114	47.4%	3	33.3%	benign(0)	tolerated(0.66)	neutral(0.003)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF587	84914	genome.wustl.edu	37	19	58352682	58352682	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343662.1	+1	model	p.Y214H	0.000	125	0%	78	38.5%	4	25%	benign(0.064)	tolerated(0.18)	neutral(0.060)	NULL
ZNF587	84914	genome.wustl.edu	37	19	58370684	58370684	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000339656	+1	known	p.G302R	0.998	225	0%	131	42.7%	15	46.6%	probably_damaging(0.956)	deleterious(0.03)	deleterious(0.764)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF814	730051	genome.wustl.edu	37	19	58385391	58385391	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144989.1	-1	validated	p.R456Q	0.001	249	0.4%	122	13.1%	1	0%	unknown(0)	tolerated(0.1)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF814	730051	genome.wustl.edu	37	19	58385737	58385737	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144989.1	-1	validated	p.N341D	0.000	868	0%	383	13.3%	3	33.3%	unknown(0)	tolerated(0.61)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF814	730051	genome.wustl.edu	37	19	58386368	58386368	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144989.1	-1	validated	p.Y130	0.000	342	0%	177	28.2%	2	0%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF418	147686	genome.wustl.edu	37	19	58437927	58437927	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133460.1	-1	provisional	p.G541E	0.000	111	0%	63	46%	2	50%	benign(0.125)	tolerated(0.56)	neutral(0.017)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF256	10172	genome.wustl.edu	37	19	58453326	58453326	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005773.2	-1	validated	p.T284A	0.000	109	0%	63	42.9%	6	16.6%	benign(0.002)	tolerated(0.67)	neutral(0.003)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF606	80095	genome.wustl.edu	37	19	58490285	58490285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025027.3	-1	validated	p.R588I	1.000	167	0%	80	46.3%	6	66.6%	possibly_damaging(0.902)	deleterious(0)	deleterious(0.801)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZSCAN1	284312	genome.wustl.edu	37	19	58563961	58563961	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182572.3	+1	validated	p.A190V	0.003	10	0.000	7	0.571	0	-	probably_damaging(0.974)	tolerated(0.24)	neutral(0.453)	NULL
ZSCAN1	284312	genome.wustl.edu	37	19	58565098	58565098	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182572.3	+1	validated	p.T302	0.045	17	0%	11	63.6%	1	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZSCAN18	65982	genome.wustl.edu	37	19	58601411	58601411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145542.1	-1	validated	p.R131H	0.968	6	0.000	9	0.667	22	31.8%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_SCAN,HMMSmart_SCAN
ZNF329	79673	genome.wustl.edu	37	19	58639978	58639978	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024620.3	-1	validated	p.R298Q	0.851	321	0%	167	40.1%	10	60%	probably_damaging(1)	tolerated(0.71)	deleterious(0.501)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF329	79673	genome.wustl.edu	37	19	58640203	58640203	+	Missense_Mutation	SNP	C	C	T	rs148562357	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024620.3	-1	validated	p.R223Q	1.000	194	0%	130	90%	5	100%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF274	10782	genome.wustl.edu	37	19	58724297	58724297	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000424679	+1	known	p.T583A	0.998	55	0%	39	61.5%	24	33.3%	possibly_damaging(0.525)	tolerated(0.07)	deleterious(0.496)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF544	27300	genome.wustl.edu	37	19	58757691	58757691	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014480.2	+1	provisional	p.A20T	0.997	33	0%	35	31.4%	63	49.2%	benign(0.29)	tolerated(0.18)	neutral(0.145)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZNF8	7554	genome.wustl.edu	37	19	58805720	58805720	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021089.2	+1	validated	p.C182	0.000	35	0%	23	17.4%	8	25%	-	-	-	NULL
ZNF132	7691	genome.wustl.edu	37	19	58946279	58946279	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003433.3	-1	validated	p.A178T	0.000	104	0%	66	39.4%	1	0%	benign(0.005)	tolerated(0.48)	neutral(0.011)	NULL
ZNF446	55663	genome.wustl.edu	37	19	58989096	58989096	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017908.2	+1	provisional	p.E145D	0.255	18	0%	33	45.5%	12	58.3%	possibly_damaging(0.916)	tolerated(0.35)	neutral(0.388)	NULL
SLC27A5	10998	genome.wustl.edu	37	19	59012675	59012675	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012254.2	-1	reviewed	p.R387Q	1.000	35	0%	30	33.3%	4	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
TRIM28	10155	genome.wustl.edu	37	19	59056844	59056844	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005762.2	+1	reviewed	p.E131D	1.000	30	0%	24	25%	91	40.6%	benign(0.203)	tolerated(0.86)	neutral(0.020)	superfamily_RING/U-box
TRIM28	10155	genome.wustl.edu	37	19	59059681	59059681	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005762.2	+1	reviewed	p.R374	0.976	81	0%	65	47.7%	315	52%	-	-	-	HMMSmart_SM00502
C20orf96	140680	genome.wustl.edu	37	20	257870	257870	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153269.1	-1	predicted	p.Q240	0.988	41	0%	43	41.9%	40	50%	-	-	-	NULL
ENSG00000247315	0	genome.wustl.edu	37	20	279500	279500	+	RNA	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000500893	-1	known	NULL	1.000	4	0.000	6	0.667	9	66.6%	-	-	-	-
CSNK2A1	1457	genome.wustl.edu	37	20	472920	472920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001895.3	-1	reviewed	p.P200L	1.000	199	0%	82	39%	78	44.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ANGPT4	51378	genome.wustl.edu	37	20	861901	861901	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015985.2	-1	reviewed	p.F288	1.000	36	0%	24	54.2%	1	100%	-	-	-	HMMPfam_Fibrinogen_C,HMMSmart_FBG,superfamily_Fibrinogen_a/b/g_C
PSMF1	9491	genome.wustl.edu	37	20	1115924	1115924	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006814.3	+1	reviewed	p.P176S	1.000	33	0%	22	54.5%	92	43.4%	probably_damaging(0.999)	tolerated(0.13)	deleterious(0.743)	NULL
SNPH	9751	genome.wustl.edu	37	20	1277043	1277043	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014723.2	+1	reviewed	p.R10W	0.995	20	0%	23	43.5%	1	0%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
SNPH	9751	genome.wustl.edu	37	20	1285597	1285597	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014723.2	+1	reviewed	p.R128	0.553	11	0%	20	55%	1	0%	-	-	-	NULL
SIRPA	140885	genome.wustl.edu	37	20	1902123	1902123	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040022.1	+1	reviewed	p.H173	0.961	181	0%	158	41.1%	5	20%	-	-	-	HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726
SIRPA	140885	genome.wustl.edu	37	20	1905411	1905411	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001040022.1	+1	reviewed	p.E363	0.000	272	0%	182	21.4%	20	25%	-	-	-	NULL
SNRPB	6628	genome.wustl.edu	37	20	2446432	2446432	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198216.1	-1	reviewed	p.E63	1.000	167	0%	92	41.3%	432	46.9%	-	-	-	HMMPfam_LSM,HMMSmart_SM00651,superfamily_Sm-like ribonucleoproteins
ZNF343	79175	genome.wustl.edu	37	20	2464598	2464598	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024325.4	-1	validated	p.K337E	0.001	77	0%	60	40%	5	60%	probably_damaging(0.992)	tolerated(0.15)	deleterious(0.689)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
TMC2	117532	genome.wustl.edu	37	20	2604935	2604935	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080751.2	+1	validated	p.Y733	0.992	54	1.9%	38	34.2%	0	-	-	-	-	NULL
NOP56	10528	genome.wustl.edu	37	20	2636367	2636367	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006392.2	+1	reviewed	p.S295N	1.000	86	0%	81	48.1%	88	70.4%	benign(0.002)	tolerated(1)	-	HMMPfam_Nop,superfamily_SSF89124
NOP56	10528	genome.wustl.edu	37	20	2637452	2637452	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006392.2	+1	reviewed	p.R398*	1.000	109	0%	82	54.9%	106	16.9%	-	-	-	HMMPfam_Nop,superfamily_SSF89124
CPXM1	56265	genome.wustl.edu	37	20	2777053	2777053	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019609.4	-1	reviewed	p.G361E	1.000	33	0%	38	44.7%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,superfamily_Zn-dependent exopeptidases
ENSG00000198326	0	genome.wustl.edu	37	20	2797379	2797379	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000361033	+1	known	p.R103H	0.956	24	0%	18	44.4%	0	-	possibly_damaging(0.865)	deleterious(0)	deleterious(0.780)	NULL
VPS16	64601	genome.wustl.edu	37	20	2842291	2842291	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022575.2	+1	reviewed	p.A280	0.046	30	0%	30	43.3%	26	42.3%	-	-	-	HMMPfam_Vps16_N
PTPRA	5786	genome.wustl.edu	37	20	3016535	3016535	+	Missense_Mutation	SNP	G	G	A	rs148576102	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002836.3	+1	reviewed	p.V716M	1.000	25	0%	22	27.3%	92	45.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
PTPRA	5786	genome.wustl.edu	37	20	3018746	3018746	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002836.3	+1	reviewed	p.I792	0.998	240	0%	154	46.8%	58	48.2%	-	-	-	HMMSmart_PTPc,superfamily_SSF52799
SLC4A11	83959	genome.wustl.edu	37	20	3215218	3215218	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032034.3	-1	reviewed	p.R112Q	1.000	17	0%	22	50%	3	33.3%	probably_damaging(0.99)	tolerated(0.23)	deleterious(0.483)	superfamily_Phoshotransferase/anion transport protein
SLC4A11	83959	genome.wustl.edu	37	20	3215509	3215509	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032034.3	-1	reviewed	p.F56	0.003	45	0%	42	47.6%	2	0%	-	-	-	NULL
ATRN	8455	genome.wustl.edu	37	20	3526537	3526537	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139321.2	+1	reviewed	p.S246I	0.999	404	0%	239	41%	7	0%	possibly_damaging(0.87)	tolerated(0.1)	deleterious(0.625)	HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,superfamily_EGF/Laminin
ATRN	8455	genome.wustl.edu	37	20	3529985	3529985	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139321.2	+1	reviewed	p.A371V	1.000	255	0%	132	43.9%	8	50%	possibly_damaging(0.661)	tolerated(1)	neutral(0.234)	HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain
ATRN	8455	genome.wustl.edu	37	20	3564618	3564618	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139321.2	+1	reviewed	p.S946	1.000	49	0%	30	56.7%	39	58.9%	-	-	-	HMMPfam_PSI,HMMSmart_SM00423
ADAM33	80332	genome.wustl.edu	37	20	3653229	3653229	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025220.2	-1	reviewed	p.R452	0.002	12	0%	16	37.5%	0	-	-	-	-	HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin)
ADAM33	80332	genome.wustl.edu	37	20	3654748	3654748	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025220.2	-1	reviewed	p.K234T	1.000	46	0%	44	47.7%	1	0%	unknown(0)	deleterious(0.01)	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAM33	80332	genome.wustl.edu	37	20	3655282	3655282	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025220.2	-1	reviewed	p.G157S	0.009	21	0%	26	19.2%	0	-	benign(0)	tolerated(0.25)	neutral(0.037)	HMMPfam_Pep_M12B_propep
SIGLEC1	6614	genome.wustl.edu	37	20	3675460	3675460	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_023068.3	-1	reviewed	p.R932W	0.438	10	0%	12	33.3%	0	-	probably_damaging(0.997)	tolerated(0.06)	deleterious(0.788)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
C20orf27	54976	genome.wustl.edu	37	20	3739298	3739298	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039140.1	-1	validated	p.R41H	1.000	36	0%	49	36.7%	96	55.2%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
CDC25B	994	genome.wustl.edu	37	20	3778354	3778354	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021873.2	+1	reviewed	p.E96K	0.312	16	0%	26	30.8%	37	40.5%	possibly_damaging(0.836)	tolerated(0.18)	neutral(0.376)	NULL
SMOX	54498	genome.wustl.edu	37	20	4155800	4155800	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175839.1	+1	reviewed	p.G33D	1.000	29	0%	34	47.1%	29	41.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_FAD/NAD(P)-binding domain
SMOX	54498	genome.wustl.edu	37	20	4158175	4158175	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_175839.1	+1	reviewed	p.R129H	0.100	74	0%	66	37.9%	29	44.8%	benign(0.008)	tolerated(0.3)	neutral(0.029)	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain
SLC23A2	9962	genome.wustl.edu	37	20	4839969	4839969	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005116.5	-1	reviewed	p.G562	1.000	109	0%	99	39.4%	9	44.4%	-	-	-	NULL
SLC23A2	9962	genome.wustl.edu	37	20	4866472	4866472	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005116.5	-1	reviewed	p.T189I	1.000	105	0%	65	33.8%	7	0%	benign(0.008)	tolerated(0.08)	neutral(0.300)	HMMPfam_Xan_ur_permease
PCNA	5111	genome.wustl.edu	37	20	5096122	5096122	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002592.2	-1	reviewed	p.L227I	1.000	388	0%	234	39.3%	205	47.8%	benign(0.237)	tolerated(0.25)	neutral(0.060)	HMMPfam_PCNA_C,superfamily_DNA clamp
GPCPD1	56261	genome.wustl.edu	37	20	5560675	5560675	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019593.3	-1	validated	p.K151R	1.000	147	0%	87	46%	12	50%	probably_damaging(0.999)	tolerated(0.83)	deleterious(0.491)	NULL
CHGB	1114	genome.wustl.edu	37	20	5904128	5904128	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001819.2	+1	reviewed	p.H446	0.013	60	0%	57	40.4%	0	-	-	-	-	HMMPfam_Granin
MCM8	84515	genome.wustl.edu	37	20	5953765	5953765	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032485.4	+1	reviewed	p.N440H	1.000	214	0%	99	20.2%	3	0%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_MCM,HMMSmart_SM00350,superfamily_P-loop containing nucleoside triphosphate hydrolases
MCM8	84515	genome.wustl.edu	37	20	5966607	5966607	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032485.4	+1	reviewed	p.L665	1.000	303	0%	164	43.9%	17	52.9%	-	-	-	HMMPfam_MCM,HMMSmart_SM00350,superfamily_P-loop containing nucleoside triphosphate hydrolases
FERMT1	55612	genome.wustl.edu	37	20	6057863	6057863	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017671.4	-1	reviewed	p.L664R	0.995	38	0%	37	13.5%	6	16.6%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
FERMT1	55612	genome.wustl.edu	37	20	6075603	6075603	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017671.4	-1	reviewed	p.D374	0.996	414	0%	116	38.8%	0	-	-	-	-	HMMPfam_PH,HMMSmart_SM00233,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
FERMT1	55612	genome.wustl.edu	37	20	6100118	6100118	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017671.4	-1	reviewed	p.D28	0.000	133	0%	94	41.5%	1	0%	-	-	-	NULL
ANKRD5	63926	genome.wustl.edu	37	20	10032318	10032318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022096.4	+1	validated	p.V551I	0.998	187	0.5%	46	45.7%	2	100%	possibly_damaging(0.653)	tolerated(0.28)	neutral(0.261)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ANKRD5	63926	genome.wustl.edu	37	20	10033895	10033895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022096.4	+1	validated	p.T669I	0.002	227	0%	70	38.6%	4	75%	benign(0.157)	deleterious(0.02)	neutral(0.397)	NULL
C20orf94	128710	genome.wustl.edu	37	20	10541454	10541454	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009608.1	+1	validated	p.P75L	1.000	189	0%	77	46.8%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
C20orf94	128710	genome.wustl.edu	37	20	10603749	10603749	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009608.1	+1	validated	p.R317*	0.699	63	0%	23	39.1%	2	0%	-	-	-	NULL
JAG1	182	genome.wustl.edu	37	20	10621443	10621443	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000214.2	-1	reviewed	p.K1063E	0.984	117	0%	102	45.1%	23	60.8%	benign(0.032)	tolerated(0.87)	neutral(0.002)	NULL
BTBD3	22903	genome.wustl.edu	37	20	11903532	11903532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014962.2	+1	validated	p.D263N	1.000	88	0%	46	32.6%	22	31.8%	possibly_damaging(0.858)	deleterious(0)	deleterious(0.776)	NULL
SPTLC3	55304	genome.wustl.edu	37	20	13029625	13029625	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018327.2	+1	validated	p.L50	0.071	245	0%	93	37.6%	7	42.8%	-	-	-	NULL
SPTLC3	55304	genome.wustl.edu	37	20	13134720	13134720	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000431275	+1	known	p.S48L	1.000	282	0%	108	43.5%	5	40%	-	-	-	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
TASP1	55617	genome.wustl.edu	37	20	13539737	13539737	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017714.2	-1	reviewed	p.R198K	1.000	534	0%	190	44.7%	2	50%	benign(0.002)	tolerated(0.99)	-	HMMPfam_Asparaginase_2,superfamily_SSF56235
ESF1	51575	genome.wustl.edu	37	20	13763472	13763472	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016649.3	-1	provisional	p.I105	0.023	252	0%	109	33.9%	0	-	-	-	-	NULL
ESF1	51575	genome.wustl.edu	37	20	13763630	13763630	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016649.3	-1	provisional	p.V53M	1.000	114	0%	69	50.7%	6	33.3%	possibly_damaging(0.862)	deleterious(0)	deleterious(0.778)	NULL
C20orf7	79133	genome.wustl.edu	37	20	13797531	13797531	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024120.4	+1	reviewed	p.R291S	0.991	359	0%	110	50%	27	59.2%	benign(0.001)	tolerated(0.26)	neutral(0.034)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
MACROD2	140733	genome.wustl.edu	37	20	13982963	13982963	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080676.5	+1	validated	p.R26G	1.000	359	0%	133	42.1%	5	20%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
KIF16B	55614	genome.wustl.edu	37	20	16352371	16352371	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024704.3	-1	validated	p.R1129H	1.000	205	0%	99	43.4%	7	28.5%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
KIF16B	55614	genome.wustl.edu	37	20	16488663	16488663	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024704.3	-1	validated	p.A213	0.350	83	0%	30	66.7%	7	42.8%	-	-	-	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF16B	55614	genome.wustl.edu	37	20	16492153	16492153	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024704.3	-1	validated	p.E156K	1.000	188	0%	58	36.2%	5	20%	unknown(0)	deleterious(0)	-	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
DSTN	11034	genome.wustl.edu	37	20	17581620	17581620	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006870.3	+1	reviewed	p.R81C	1.000	185	0%	58	51.7%	245	30.2%	benign(0.375)	tolerated(0.12)	neutral(0.380)	HMMPfam_Cofilin_ADF,HMMSmart_SM00102,superfamily_Actin depolymerizing proteins
SNX5	27131	genome.wustl.edu	37	20	17930826	17930826	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014426.2	-1	reviewed	p.T247	1.000	136	0%	77	16.9%	80	8.7%	-	-	-	HMMPfam_Vps5
C20orf72	92667	genome.wustl.edu	37	20	17956473	17956473	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052865.2	+1	predicted	p.R220*	0.974	226	0%	168	45.8%	7	28.5%	-	-	-	NULL
CSRP2BP	57325	genome.wustl.edu	37	20	18163836	18163836	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020536.4	+1	reviewed	p.S626	1.000	104	0%	94	39.4%	13	46.1%	-	-	-	NULL
DZANK1	55184	genome.wustl.edu	37	20	18440842	18440842	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099407.1	-1	validated	p.T73I	1.000	384	0%	171	37.4%	1	100%	benign(0.06)	deleterious(0.04)	neutral(0.353)	NULL
POLR3F	10621	genome.wustl.edu	37	20	18462322	18462322	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006466.2	+1	reviewed	p.K247N	1.000	159	0%	76	44.7%	16	50%	probably_damaging(0.996)	tolerated(0.26)	deleterious(0.496)	HMMPfam_RNA_pol_Rpc34
RBBP9	10741	genome.wustl.edu	37	20	18474613	18474613	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006606.2	-1	reviewed	p.I79	0.930	37	0%	25	48%	19	47.3%	-	-	-	HMMPfam_DUF1234,superfamily_alpha/beta-Hydrolases
RBBP9	10741	genome.wustl.edu	37	20	18474666	18474666	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006606.2	-1	reviewed	p.E62K	0.996	35	0%	31	45.2%	19	63.1%	possibly_damaging(0.908)	tolerated(0.31)	neutral(0.389)	HMMPfam_DUF1234,superfamily_alpha/beta-Hydrolases
SLC24A3	57419	genome.wustl.edu	37	20	19566106	19566106	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020689.3	+1	validated	p.D177G	1.000	170	0%	104	14.4%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Na_Ca_ex
NAA20	51126	genome.wustl.edu	37	20	20013245	20013245	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016100.3	+1	validated	p.T133	0.025	132	0%	37	29.7%	109	22%	-	-	-	superfamily_Acyl-CoA N-acyltransferases (Nat)
CRNKL1	51340	genome.wustl.edu	37	20	20029104	20029104	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016652.4	-1	reviewed	p.R274Q	1.000	289	0%	159	52.2%	29	44.8%	probably_damaging(1)	tolerated(0.12)	deleterious(0.760)	HMMPfam_HAT,HMMSmart_SM00386,superfamily_TPR-like
C20orf26	26074	genome.wustl.edu	37	20	20257859	20257859	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015585.3	+1	validated	p.E851D	0.057	35	0%	30	40%	0	-	possibly_damaging(0.912)	tolerated(0.19)	neutral(0.413)	superfamily_FAD/NAD(P)-binding domain
C20orf26	26074	genome.wustl.edu	37	20	20269504	20269504	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015585.3	+1	validated	p.P1016	1.000	69	0%	39	46.2%	0	-	-	-	-	NULL
C20orf26	26074	genome.wustl.edu	37	20	20279020	20279020	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015585.3	+1	validated	p.D1138Y	1.000	89	0%	59	15.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RALGAPA2	57186	genome.wustl.edu	37	20	20392673	20392673	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020343.2	-1	validated	p.T1872M	1.000	142	0%	101	34.7%	5	40%	possibly_damaging(0.951)	tolerated(0.16)	neutral(0.454)	NULL
XRN2	22803	genome.wustl.edu	37	20	21327079	21327079	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012255.3	+1	reviewed	p.R519Q	1.000	146	0%	77	32.5%	61	50.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FOXA2	3170	genome.wustl.edu	37	20	22562494	22562494	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021784.4	-1	reviewed	p.S462	0.943	56	0%	93	44.1%	39	56.4%	-	-	-	NULL
SSTR4	6754	genome.wustl.edu	37	20	23016676	23016676	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001052.2	+1	validated	p.D186Y	0.900	11	0%	12	75%	0	-	possibly_damaging(0.508)	deleterious(0.04)	deleterious(0.519)	HMMPfam_7tm_1,superfamily_SSF81321
SSTR4	6754	genome.wustl.edu	37	20	23016928	23016928	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001052.2	+1	validated	p.L270I	0.997	97	0%	119	38.7%	0	-	benign(0.049)	tolerated(0.74)	neutral(0.005)	HMMPfam_7tm_1,superfamily_SSF81321
CD93	22918	genome.wustl.edu	37	20	23066700	23066700	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012072.3	-1	reviewed	p.L44M	0.996	3	0.000	11	0.455	4	0%	probably_damaging(0.996)	tolerated(0.05)	deleterious(0.807)	HMMPfam_Lectin_C,HMMSmart_CLECT,superfamily_C-type_lectin_fold
NAPB	63908	genome.wustl.edu	37	20	23361947	23361947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022080.2	-1	validated	p.A190V	1.000	168	0%	68	30.9%	4	25%	benign(0)	tolerated(0.16)	neutral(0.059)	superfamily_TPR-like
CSTL1	128817	genome.wustl.edu	37	20	23424580	23424580	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138283.1	+1	reviewed	p.G77R	0.952	59	0%	37	43.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cystatin,HMMSmart_CY,superfamily_SSF54403
CST9	128822	genome.wustl.edu	37	20	23584269	23584269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008693.2	-1	reviewed	p.E120K	0.001	146	0%	97	41.2%	0	-	probably_damaging(0.954)	deleterious(0.05)	deleterious(0.743)	superfamily_SSF54403
GGTLC1	92086	genome.wustl.edu	37	20	23967147	23967147	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178311.2	-1	reviewed	p.D34	0.928	25	0%	29	51.7%	0	-	-	-	-	HMMPfam_G_glu_transpept
SYNDIG1	79953	genome.wustl.edu	37	20	24523842	24523842	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024893.1	+1	provisional	p.D37Y	1.000	26	0%	13	38.5%	0	-	possibly_damaging(0.819)	deleterious(0.05)	deleterious(0.655)	NULL
PYGB	5834	genome.wustl.edu	37	20	25277062	25277062	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002862.3	+1	reviewed	p.F812L	1.000	33	0%	45	40%	153	43.7%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Phosphorylase,superfamily_SSF53756
ABHD12	26090	genome.wustl.edu	37	20	25282983	25282983	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015600.3	-1	validated	e12-1	1.000	31	0%	44	11.4%	0	-	-	-	-	-
NINL	22981	genome.wustl.edu	37	20	25491371	25491371	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025176.4	-1	validated	p.P152	1.000	228	0%	161	45.3%	8	12.5%	-	-	-	superfamily_SSF47473
ENSG00000099389	0	genome.wustl.edu	37	20	26094541	26094541	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356439	-1	known	p.T28A	1.000	1225	0%	573	15%	0	-	-	-	-	NULL
BCL2L1	598	genome.wustl.edu	37	20	30253861	30253861	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138578.1	-1	reviewed	p.N198S	0.997	46	0%	33	33.3%	75	48%	benign(0)	tolerated(0.16)	neutral(0.059)	superfamily_Bcl-2 inhibitors of programmed cell death
TPX2	22974	genome.wustl.edu	37	20	30347967	30347967	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012112.4	+1	validated	p.T72A	0.984	314	0%	149	33.6%	15	93.3%	possibly_damaging(0.631)	tolerated(0.09)	deleterious(0.517)	NULL
TPX2	22974	genome.wustl.edu	37	20	30380610	30380610	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012112.4	+1	validated	p.R496*	0.995	249	0%	93	52.7%	27	0%	-	-	-	NULL
TTLL9	164395	genome.wustl.edu	37	20	30475041	30475041	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008409.2	+1	provisional	p.R38*	0.995	240	0%	119	52.9%	0	-	-	-	-	NULL
HCK	3055	genome.wustl.edu	37	20	30671713	30671713	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002110.3	+1	reviewed	p.S183	0.002	60	0%	31	35.5%	7	71.4%	-	-	-	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
C20orf112	140688	genome.wustl.edu	37	20	31035494	31035494	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080616.3	-1	validated	p.A406T	1.000	19	0%	15	53.3%	7	71.4%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
DNMT3B	1789	genome.wustl.edu	37	20	31372644	31372644	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006892.3	+1	reviewed	p.R95	0.996	51	0%	35	25.7%	7	42.8%	-	-	-	NULL
DNMT3B	1789	genome.wustl.edu	37	20	31388078	31388078	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006892.3	+1	reviewed	p.D627N	1.000	127	0.8%	95	33.7%	14	28.5%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMPfam_DNA_methylase,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
DNMT3B	1789	genome.wustl.edu	37	20	31394130	31394130	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006892.3	+1	reviewed	p.E806G	1.000	70	0%	55	40%	19	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DNA_methylase,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
EFCAB8	388795	genome.wustl.edu	37	20	31505293	31505293	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000439060	+1	known	p.A105T	0.308	53	0%	34	41.2%	0	-	-	-	-	superfamily_WD40 repeat-like
EFCAB8	388795	genome.wustl.edu	37	20	31507959	31507959	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000440534	+1	known	p.E784*	0.000	157	0%	116	39.7%	0	-	-	-	-	NULL
EFCAB8	388795	genome.wustl.edu	37	20	31549373	31549373	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000440534	+1	known	p.T1275	0.000	20	0%	20	35%	0	-	-	-	-	NULL
SUN5	140732	genome.wustl.edu	37	20	31573551	31573551	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080675.3	-1	validated	p.F296	0.900	55	0%	27	44.4%	0	-	-	-	-	HMMPfam_Sad1_UNC
BPIFB2	80341	genome.wustl.edu	37	20	31609144	31609144	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025227.1	+1	reviewed	p.L418F	0.999	5	0.000	16	0.625	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_LBP_BPI_CETP_C,HMMSmart_SM00329,superfamily_Bactericidal permeability-increasing protein BPI
BPIFB6	128859	genome.wustl.edu	37	20	31622087	31622087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174897.2	+1	validated	p.T98I	0.986	61	0%	46	50%	0	-	probably_damaging(0.992)	tolerated(0.09)	deleterious(0.744)	HMMPfam_LBP_BPI_CETP,HMMSmart_BPI1,superfamily_Bactericidal_perm-incr_a/b_dom
BPIFA2	140683	genome.wustl.edu	37	20	31763302	31763302	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080574.2	+1	validated	p.P167L	0.000	99	0%	73	24.7%	0	-	benign(0.401)	tolerated(0.71)	neutral(0.131)	HMMPfam_LBP_BPI_CETP,superfamily_Bactericidal_perm-incr_a/b_dom
BPIFA1	51297	genome.wustl.edu	37	20	31828052	31828052	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016583.3	+1	reviewed	p.A148T	0.030	65	0%	36	33.3%	0	-	possibly_damaging(0.507)	tolerated(0.47)	neutral(0.181)	HMMPfam_LBP_BPI_CETP,superfamily_Bactericidal permeability-increasing protein BPI
E2F1	1869	genome.wustl.edu	37	20	32265081	32265081	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005225.2	-1	reviewed	p.P299H	1.000	100	0%	38	89.5%	19	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PXMP4	11264	genome.wustl.edu	37	20	32298401	32298401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007238.4	-1	validated	p.G112D	1.000	89	0%	85	36.5%	20	45%	unknown(0)	-	-	HMMPfam_Pmp24
ITCH	83737	genome.wustl.edu	37	20	33001580	33001580	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031483.4	+1	reviewed	p.G124C	0.935	282	0.4%	142	16.2%	26	11.5%	probably_damaging(0.982)	deleterious(0.03)	deleterious(0.791)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
NCOA6	23054	genome.wustl.edu	37	20	33324531	33324531	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014071.2	-1	reviewed	p.T1975	0.879	154	0%	72	40.3%	30	33.3%	-	-	-	NULL
NCOA6	23054	genome.wustl.edu	37	20	33334700	33334700	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014071.2	-1	reviewed	p.E942A	0.995	138	0%	87	42.5%	9	55.5%	possibly_damaging(0.806)	deleterious(0.01)	deleterious(0.709)	NULL
NCOA6	23054	genome.wustl.edu	37	20	33337752	33337752	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014071.2	-1	reviewed	p.P749L	1.000	70	0%	57	29.8%	28	60.7%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
NCOA6	23054	genome.wustl.edu	37	20	33338113	33338113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014071.2	-1	reviewed	p.V629M	0.989	57	0%	55	43.6%	18	50%	possibly_damaging(0.563)	deleterious(0)	deleterious(0.637)	NULL
NCOA6	23054	genome.wustl.edu	37	20	33364168	33364168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014071.2	-1	reviewed	p.R107W	1.000	105	0%	57	14%	12	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MYH7B	57644	genome.wustl.edu	37	20	33577714	33577714	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020884.3	+1	reviewed	p.A629T	0.998	25	0%	26	46.2%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH7B	57644	genome.wustl.edu	37	20	33577874	33577874	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020884.3	+1	reviewed	p.V651M	1.000	51	0%	56	23.2%	2	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH7B	57644	genome.wustl.edu	37	20	33584193	33584193	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020884.3	+1	reviewed	p.V1038	0.998	14	0%	15	33.3%	1	0%	-	-	-	superfamily_tRNA-binding arm
MYH7B	57644	genome.wustl.edu	37	20	33586109	33586109	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020884.3	+1	reviewed	p.E1295	1.000	18	0%	17	35.3%	1	0%	-	-	-	HMMPfam_Myosin_tail_1,superfamily_Prefoldin
TRPC4AP	26133	genome.wustl.edu	37	20	33592341	33592341	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015638.2	-1	validated	p.A657T	0.322	68	0%	62	35.5%	83	78.3%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
TRPC4AP	26133	genome.wustl.edu	37	20	33609001	33609001	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015638.2	-1	validated	p.R404*	1.000	37	0%	40	30%	38	5.2%	-	-	-	NULL
MMP24	10893	genome.wustl.edu	37	20	33842430	33842430	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006690.3	+1	reviewed	p.G230	0.001	133	0%	108	13%	0	-	-	-	-	"HMMPfam_Peptidase_M10,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain"
FAM83C	128876	genome.wustl.edu	37	20	33875355	33875355	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178468.4	-1	validated	p.L409	0.004	34	0%	52	53.8%	0	-	-	-	-	NULL
FAM83C	128876	genome.wustl.edu	37	20	33875622	33875622	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178468.4	-1	validated	p.R320	0.003	22	0%	31	45.2%	0	-	-	-	-	NULL
GDF5	8200	genome.wustl.edu	37	20	34022254	34022254	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000557.2	-1	reviewed	p.R320M	1.000	10	0%	14	42.9%	15	53.3%	benign(0.096)	deleterious(0.03)	neutral(0.371)	HMMPfam_TGFb_propeptide
CEP250	11190	genome.wustl.edu	37	20	34096828	34096828	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007186.3	+1	reviewed	p.G2321	0.000	47	0%	42	42.9%	52	28.8%	-	-	-	NULL
CEP250	11190	genome.wustl.edu	37	20	34097877	34097877	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007186.3	+1	reviewed	p.Q2353H	1.000	154	0%	121	46.3%	51	56.8%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
C20orf173	140873	genome.wustl.edu	37	20	34116763	34116763	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000246199	-1	known	p.Q32H	0.000	45	0%	42	38.1%	0	-	benign(0.031)	-	-	NULL
ERGIC3	51614	genome.wustl.edu	37	20	34130670	34130670	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198398.1	+1	validated	p.S116N	1.000	55	0%	51	23.5%	523	19.6%	benign(0.017)	tolerated(0.34)	neutral(0.024)	NULL
ERGIC3	51614	genome.wustl.edu	37	20	34136404	34136404	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198398.1	+1	validated	p.Y202H	1.000	56	0%	46	37%	280	53.9%	benign(0.333)	tolerated(0.23)	neutral(0.146)	HMMPfam_DUF1692
CPNE1	8904	genome.wustl.edu	37	20	34214538	34214538	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003915.4	-1	reviewed	p.A480D	0.918	34	0%	28	35.7%	221	35.2%	benign(0.054)	tolerated(0.22)	neutral(0.046)	HMMSmart_VWA,superfamily_SSF53300
RBM12	10137	genome.wustl.edu	37	20	34243011	34243011	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006047.4	-1	reviewed	p.E78	1.000	263	0%	144	41.7%	44	52.2%	-	-	-	NULL
PHF20	51230	genome.wustl.edu	37	20	34526962	34526962	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016436.4	+1	validated	p.R882C	0.445	11	0%	13	69.2%	12	16.6%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
C20orf152	140894	genome.wustl.edu	37	20	34575388	34575388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080834.1	+1	predicted	p.R263M	0.349	117	0%	53	50.9%	0	-	possibly_damaging(0.691)	tolerated(0.06)	deleterious(0.570)	superfamily_cNMP_binding
EPB41L1	2036	genome.wustl.edu	37	20	34776333	34776333	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012156.2	+1	reviewed	p.R313Q	1.000	63	0%	47	61.7%	23	43.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FERM_C,superfamily_PH domain-like
EPB41L1	2036	genome.wustl.edu	37	20	34785863	34785863	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012156.2	+1	reviewed	p.S523N	1.000	49	0%	27	44.4%	20	50%	possibly_damaging(0.649)	tolerated(0.08)	deleterious(0.528)	HMMPfam_SAB
EPB41L1	2036	genome.wustl.edu	37	20	34797684	34797684	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012156.2	+1	reviewed	p.S648I	1.000	8	0.000	9	0.556	4	0%	benign(0.15)	tolerated(0.2)	neutral(0.062)	NULL
NDRG3	57446	genome.wustl.edu	37	20	35312837	35312837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032013.2	-1	validated	p.P121H	0.950	134	0%	68	39.7%	40	52.5%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_Ndr,superfamily_alpha/beta-Hydrolases
SOGA1	140710	genome.wustl.edu	37	20	35438451	35438451	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199181.2	-1	validated	p.E601	1.000	28	0%	23	43.5%	5	20%	-	-	-	NULL
SRC	6714	genome.wustl.edu	37	20	36022344	36022344	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005417.3	+1	reviewed	p.G133C	1.000	16	0%	19	42.1%	35	37.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
RPRD1B	58490	genome.wustl.edu	37	20	36694550	36694550	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021215.3	+1	validated	p.N241	1.000	80	0%	26	46.2%	5	60%	-	-	-	NULL
LBP	3929	genome.wustl.edu	37	20	36993349	36993349	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004139.2	+1	reviewed	p.T288	0.350	151	0%	107	49.5%	0	-	-	-	-	HMMPfam_LBP_BPI_CETP_C,HMMSmart_SM00329,superfamily_Bactericidal permeability-increasing protein BPI
RALGAPB	57148	genome.wustl.edu	37	20	37179733	37179733	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020336.2	+1	validated	p.R1010H	1.000	230	0%	78	37.2%	10	40%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
RALGAPB	57148	genome.wustl.edu	37	20	37187011	37187011	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020336.2	+1	validated	p.I1149T	1.000	385	0%	153	43.8%	15	40%	benign(0.01)	deleterious(0)	neutral(0.445)	superfamily_Rap/Ran-GAP (Pfam 02145)
ACTR5	79913	genome.wustl.edu	37	20	37380858	37380858	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024855.3	+1	validated	p.Y230	0.561	65	0%	48	50%	5	40%	-	-	-	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
PPP1R16B	26051	genome.wustl.edu	37	20	37535682	37535682	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000438192	+1	known	p.W195*	1.000	97	0%	79	50.6%	1	0%	possibly_damaging(0.9)	deleterious(0.04)	deleterious(0.706)	superfamily_Ankyrin repeat
PPP1R16B	26051	genome.wustl.edu	37	20	37547290	37547290	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015568.2	+1	reviewed	p.G562D	1.000	55	0%	32	40.6%	0	-	possibly_damaging(0.923)	tolerated(0.63)	neutral(0.376)	NULL
FAM83D	81610	genome.wustl.edu	37	20	37580267	37580267	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030919.2	+1	validated	p.R318*	1.000	152	0%	100	37%	59	59.3%	-	-	-	HMMPfam_DUF1669,superfamily_Phospholipase D/nuclease
FAM83D	81610	genome.wustl.edu	37	20	37580355	37580355	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030919.2	+1	validated	p.R347Q	0.868	85	1.2%	81	42%	44	47.7%	benign(0.025)	tolerated(0.38)	neutral(0.019)	NULL
DHX35	60625	genome.wustl.edu	37	20	37623523	37623523	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021931.2	+1	reviewed	p.D214	1.000	255	0%	101	37.6%	3	33.3%	-	-	-	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
PLCG1	5335	genome.wustl.edu	37	20	39802951	39802951	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002660.2	+1	reviewed	p.R1278K	1.000	20	0%	22	45.5%	36	0%	benign(0.004)	tolerated(0.06)	neutral(0.323)	NULL
ZHX3	23051	genome.wustl.edu	37	20	39833228	39833228	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015035.3	-1	reviewed	p.V110A	0.999	120	0.8%	72	52.8%	4	50%	benign(0.052)	deleterious(0.01)	neutral(0.409)	HMMSmart_ZnF_C2H2
PTPRT	11122	genome.wustl.edu	37	20	40714413	40714413	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000454126	-1	known	p.T947M	0.013	45	0%	26	53.8%	0	-	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRT	11122	genome.wustl.edu	37	20	40714425	40714425	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000454126	-1	known	p.P943L	0.005	43	0%	25	52%	0	-	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRT	11122	genome.wustl.edu	37	20	41306506	41306506	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133170.3	-1	reviewed	p.D385Y	1.000	30	0%	12	33.3%	0	-	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	HMMSmart_SM00060,superfamily_Fibronectin type III
L3MBTL1	26013	genome.wustl.edu	37	20	42169422	42169422	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015478.5	+1	reviewed	p.G697	1.000	70	0%	49	10.2%	7	14.2%	-	-	-	NULL
YWHAB	7529	genome.wustl.edu	37	20	43530282	43530282	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003404.3	+1	reviewed	p.H36	0.032	41	0%	15	40%	141	48.2%	-	-	-	HMMPfam_14-3-3,HMMSmart_SM00101,superfamily_14-3-3 protein
PABPC1L	80336	genome.wustl.edu	37	20	43541468	43541468	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001124756.1	+1	provisional	p.T121A	0.853	157	0%	89	39.3%	17	41.1%	benign(0)	tolerated(1)	-	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928
STK4	6789	genome.wustl.edu	37	20	43610568	43610568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006282.2	+1	reviewed	p.R115Q	1.000	465	0.2%	248	40.7%	4	25%	probably_damaging(0.998)	tolerated(0.22)	deleterious(0.516)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
MATN4	8785	genome.wustl.edu	37	20	43926569	43926569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003833.3	-1	reviewed	p.S523N	1.000	18	0%	23	47.8%	1	100%	benign(0.001)	tolerated(0.56)	neutral(0.006)	HMMSmart_VWA,superfamily_SSF53300
SPINLW1	57119	genome.wustl.edu	37	20	44171499	44171499	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020398.2	-1	reviewed	p.C77	0.031	129	0%	60	28.3%	0	-	-	-	-	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,superfamily_BPTI-like
WFDC10B	280664	genome.wustl.edu	37	20	44313516	44313516	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172131.2	-1	reviewed	p.I75L	0.000	155	0%	58	41.4%	0	-	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	NULL
DNTTIP1	116092	genome.wustl.edu	37	20	44421339	44421339	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000456939	+1	known	p.A27T	1.000	15	0%	20	40%	5	0%	-	-	-	NULL
DNTTIP1	116092	genome.wustl.edu	37	20	44424011	44424011	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052951.2	+1	validated	p.R101*	0.955	43	0%	30	33.3%	21	0%	-	-	-	NULL
NEURL2	140825	genome.wustl.edu	37	20	44518990	44518990	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080749.2	-1	validated	p.G214D	1.000	9	0.000	16	0.312	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZNF335	63925	genome.wustl.edu	37	20	44578879	44578879	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022095.3	-1	reviewed	p.E1156K	1.000	66	0%	63	38.1%	25	48%	possibly_damaging(0.895)	deleterious(0)	deleterious(0.797)	NULL
ZNF335	63925	genome.wustl.edu	37	20	44581339	44581339	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022095.3	-1	reviewed	p.P904	0.843	44	0%	39	48.7%	10	30%	-	-	-	NULL
ZNF335	63925	genome.wustl.edu	37	20	44586554	44586554	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022095.3	-1	reviewed	p.A756V	0.230	21	0%	32	40.6%	10	60%	benign(0.002)	deleterious(0.03)	neutral(0.364)	NULL
SLC12A5	57468	genome.wustl.edu	37	20	44663663	44663663	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134771.1	+1	reviewed	p.K66N	1.000	107	0%	86	38.4%	0	-	possibly_damaging(0.507)	tolerated(0.22)	neutral(0.212)	NULL
SLC12A5	57468	genome.wustl.edu	37	20	44685545	44685545	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001134771.1	+1	reviewed	p.E1063	1.000	327	0%	242	40.1%	0	-	-	-	-	NULL
CDH22	64405	genome.wustl.edu	37	20	44815483	44815483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021248.1	-1	reviewed	p.E509D	1.000	83	0%	65	43.1%	0	-	possibly_damaging(0.667)	tolerated(0.09)	deleterious(0.532)	HMMPfam_Cadherin,superfamily_Cadherin-like
SLC35C2	51006	genome.wustl.edu	37	20	44985252	44985252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015945.10	-1	reviewed	p.G99D	1.000	24	0%	10	60%	52	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZNF334	55713	genome.wustl.edu	37	20	45130368	45130368	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018102.3	-1	validated	p.R537K	0.528	111	0%	67	37.3%	1	0%	benign(0.279)	tolerated(0.08)	neutral(0.330)	superfamily_SSF57667
EYA2	2139	genome.wustl.edu	37	20	45725802	45725802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005244.4	+1	reviewed	p.G295R	1.000	215	0.5%	127	44.1%	40	85%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_Hydrolase
EYA2	2139	genome.wustl.edu	37	20	45797842	45797842	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005244.4	+1	reviewed	p.L345*	1.000	165	0%	117	48.7%	39	17.9%	-	-	-	HMMPfam_Hydrolase
ZMYND8	23613	genome.wustl.edu	37	20	45865096	45865096	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183047.1	-1	reviewed	p.A898T	1.000	64	0%	61	49.2%	25	60%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	NULL
ZMYND8	23613	genome.wustl.edu	37	20	45865120	45865120	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183047.1	-1	reviewed	p.A890T	1.000	66	0%	62	30.6%	39	38.4%	possibly_damaging(0.856)	tolerated(0.1)	deleterious(0.617)	NULL
ZMYND8	23613	genome.wustl.edu	37	20	45927476	45927476	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000467200	-1	known	p.*57R	1.000	93	0%	43	14%	25	0%	-	-	-	superfamily_Bromodomain,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD
ZMYND8	23613	genome.wustl.edu	37	20	45938875	45938875	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_183047.1	-1	reviewed	p.S53	0.974	175	0%	123	41.5%	10	50%	-	-	-	NULL
NCOA3	8202	genome.wustl.edu	37	20	46279875	46279875	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181659.2	+1	reviewed	p.Q1267H	0.996	50	0%	35	37.1%	20	30%	possibly_damaging(0.677)	tolerated(0.33)	neutral(0.265)	NULL
SULF2	55959	genome.wustl.edu	37	20	46294679	46294679	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018837.3	-1	validated	p.N608	0.515	94	0%	92	29.3%	5	20%	-	-	-	superfamily_Alkaline phosphatase-like
SULF2	55959	genome.wustl.edu	37	20	46301015	46301015	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018837.3	-1	validated	p.S501	0.972	16	0%	23	39.1%	1	0%	-	-	-	superfamily_Alkaline phosphatase-like
PREX1	57580	genome.wustl.edu	37	20	47260992	47260992	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020820.3	-1	reviewed	p.V1186M	1.000	51	0%	39	41%	6	0%	benign(0.293)	deleterious(0)	deleterious(0.535)	NULL
PREX1	57580	genome.wustl.edu	37	20	47307579	47307579	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020820.3	-1	reviewed	p.T364	0.078	91	0%	67	43.3%	5	40%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ARFGEF2	10564	genome.wustl.edu	37	20	47570259	47570259	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006420.2	+1	reviewed	p.R257M	0.000	128	0%	70	12.9%	8	0%	benign(0.079)	tolerated(0.1)	neutral(0.292)	superfamily_ARM-type_fold
ZNFX1	57169	genome.wustl.edu	37	20	47865238	47865238	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021035.2	-1	validated	p.C1441	0.268	25	0%	28	50%	14	14.2%	-	-	-	HMMPfam_zf-NF-X1
ZNFX1	57169	genome.wustl.edu	37	20	47865859	47865859	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021035.2	-1	validated	p.M1234I	1.000	48	0%	27	48.1%	24	41.6%	benign(0.002)	tolerated(0.11)	neutral(0.272)	superfamily_P-loop containing nucleoside triphosphate hydrolases
KCNB1	3745	genome.wustl.edu	37	20	47990588	47990588	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004975.2	-1	reviewed	p.S503	1.000	283	0%	154	40.9%	0	-	-	-	-	HMMPfam_Kv2channel
PTPN1	5770	genome.wustl.edu	37	20	49197868	49197868	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002827.2	+1	reviewed	p.A385	0.000	23	0%	32	21.9%	28	3.5%	-	-	-	NULL
PTPN1	5770	genome.wustl.edu	37	20	49197898	49197898	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002827.2	+1	reviewed	p.P395	0.000	25	0%	32	37.5%	26	42.3%	-	-	-	NULL
PARD6B	84612	genome.wustl.edu	37	20	49366426	49366426	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032521.2	+1	reviewed	p.R174W	1.000	90	0%	55	34.5%	10	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ
ADNP	23394	genome.wustl.edu	37	20	49510613	49510613	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015339.2	-1	reviewed	p.S213L	0.996	144	0%	66	39.4%	30	53.3%	possibly_damaging(0.685)	tolerated(0.22)	neutral(0.286)	NULL
KCNG1	3755	genome.wustl.edu	37	20	49626090	49626090	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000396017	-1	known	p.H262	0.000	18	0%	20	55%	0	-	-	-	-	NULL
NFATC2	4773	genome.wustl.edu	37	20	50049117	50049117	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173091.2	-1	reviewed	p.S737P	0.468	8	0.000	10	0.400	0	-	benign(0.001)	tolerated(0.48)	neutral(0.011)	NULL
ATP9A	10079	genome.wustl.edu	37	20	50225083	50225083	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006045.1	-1	validated	p.P907T	1.000	186	0%	105	41.9%	17	64.7%	probably_damaging(0.988)	deleterious(0.03)	deleterious(0.802)	NULL
SALL4	57167	genome.wustl.edu	37	20	50401180	50401180	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020436.3	-1	reviewed	p.R929H	1.000	86	0%	83	50.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SALL4	57167	genome.wustl.edu	37	20	50406596	50406596	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020436.3	-1	reviewed	p.A809V	0.015	43	0%	31	58.1%	2	100%	benign(0.001)	tolerated(0.28)	neutral(0.032)	NULL
SALL4	57167	genome.wustl.edu	37	20	50407920	50407920	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020436.3	-1	reviewed	p.A368T	0.121	42	0%	40	25%	0	-	benign(0.001)	tolerated(0.48)	neutral(0.011)	NULL
SALL4	57167	genome.wustl.edu	37	20	50407921	50407921	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020436.3	-1	reviewed	p.S367	0.042	43	0%	41	29.3%	0	-	-	-	-	NULL
ZFP64	55734	genome.wustl.edu	37	20	50701461	50701461	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199427.2	-1	validated	p.C525R	1.000	8	0.000	9	0.444	4	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
TSHZ2	128553	genome.wustl.edu	37	20	51870399	51870399	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173485.4	+1	validated	p.S134	0.070	40	0%	33	48.5%	4	50%	-	-	-	NULL
TSHZ2	128553	genome.wustl.edu	37	20	51870455	51870455	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173485.4	+1	validated	p.R153M	0.999	33	0%	33	42.4%	5	0%	possibly_damaging(0.819)	deleterious(0.04)	deleterious(0.658)	NULL
TSHZ2	128553	genome.wustl.edu	37	20	51870547	51870547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173485.4	+1	validated	p.R184W	0.019	23	0%	27	44.4%	3	0%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
TSHZ2	128553	genome.wustl.edu	37	20	51871288	51871288	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173485.4	+1	validated	p.S431P	1.000	48	0%	39	35.9%	3	66.6%	possibly_damaging(0.491)	tolerated(0.06)	deleterious(0.486)	NULL
TSHZ2	128553	genome.wustl.edu	37	20	51872343	51872343	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173485.4	+1	validated	p.S782	0.996	53	0%	42	38.1%	9	55.5%	-	-	-	NULL
ZNF217	7764	genome.wustl.edu	37	20	52198114	52198114	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006526.2	-1	validated	p.G418R	0.606	21	0%	28	42.9%	27	40.7%	benign(0.004)	tolerated(0.44)	neutral(0.013)	NULL
CBLN4	140689	genome.wustl.edu	37	20	54579144	54579144	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080617.4	-1	reviewed	p.Q28	1.000	11	0%	20	20%	0	-	-	-	-	NULL
FAM210B	116151	genome.wustl.edu	37	20	54941214	54941214	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080821.2	+1	validated	p.F150	0.666	173	0%	94	39.4%	18	0%	-	-	-	HMMPfam_DUF1279
CASS4	57091	genome.wustl.edu	37	20	55027369	55027369	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020356.3	+1	validated	p.H379	0.000	24	0%	18	22.2%	0	-	-	-	-	NULL
CASS4	57091	genome.wustl.edu	37	20	55033421	55033421	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020356.3	+1	validated	p.P660L	0.000	118	0%	66	51.5%	0	-	benign(0.032)	deleterious(0.04)	neutral(0.350)	NULL
CASS4	57091	genome.wustl.edu	37	20	55033505	55033505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020356.3	+1	validated	p.S688I	0.016	59	0%	46	10.9%	0	-	possibly_damaging(0.819)	tolerated(0.07)	deleterious(0.629)	NULL
GCNT7	140687	genome.wustl.edu	37	20	55072246	55072246	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000243913	-1	known	p.I18S	1.000	67	0%	37	16.2%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_Branch
FAM209B	388799	genome.wustl.edu	37	20	55108525	55108525	+	Missense_Mutation	SNP	G	G	A	rs192848959	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013646.2	+1	predicted	p.R43Q	0.729	166	0%	107	36.4%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
TFAP2C	7022	genome.wustl.edu	37	20	55206907	55206907	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003222.3	+1	reviewed	p.R194H	1.000	47	0%	40	32.5%	13	53.8%	possibly_damaging(0.929)	deleterious(0)	deleterious(0.821)	NULL
BMP7	655	genome.wustl.edu	37	20	55840807	55840807	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001719.2	-1	reviewed	p.S124R	1.000	14	0%	12	41.7%	4	75%	possibly_damaging(0.579)	tolerated(0.24)	neutral(0.237)	HMMPfam_TGFb_propeptide
RAE1	8480	genome.wustl.edu	37	20	55940437	55940437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001015885.1	+1	reviewed	p.S105L	0.999	103	0%	40	45%	47	55.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40
CTCFL	140690	genome.wustl.edu	37	20	56073639	56073639	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080618.2	-1	reviewed	p.T653	0.594	77	0%	39	33.3%	0	-	-	-	-	NULL
PCK1	5105	genome.wustl.edu	37	20	56137814	56137814	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002591.3	+1	reviewed	p.G157S	1.000	8	0.000	13	0.462	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PEPCK,superfamily_PEP_carboxykinase_N
ZBP1	81030	genome.wustl.edu	37	20	56188325	56188325	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030776.2	-1	validated	p.M188I	1.000	205	0%	139	41%	0	-	benign(0.003)	deleterious(0.03)	neutral(0.364)	NULL
ANKRD60	140731	genome.wustl.edu	37	20	56796394	56796394	+	Missense_Mutation	SNP	C	C	T	rs151327674	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001134442.3	-1	model	p.G243R	0.998	80	0%	56	37.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
RAB22A	57403	genome.wustl.edu	37	20	56928574	56928574	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020673.2	+1	reviewed	p.K119	1.000	313	0.3%	140	16.4%	23	30.4%	-	-	-	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
GNAS	2778	genome.wustl.edu	37	20	57428747	57428747	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080425.2	+1	reviewed	p.A143T	0.013	19	0%	16	56.2%	0	-	unknown(0)	tolerated(1)	-	NULL
GNAS	2778	genome.wustl.edu	37	20	57430359	57430359	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080425.2	+1	reviewed	p.Y680C	0.152	15	0%	12	50%	0	-	probably_damaging(0.965)	tolerated(0.08)	deleterious(0.707)	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
GNAS	2778	genome.wustl.edu	37	20	57470709	57470709	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080425.2	+1	reviewed	p.R704K	1.000	242	0%	154	42.9%	1089	46.7%	benign(0.097)	tolerated(0.68)	neutral(0.009)	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
TUBB1	81027	genome.wustl.edu	37	20	57598987	57598987	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030773.2	+1	validated	p.V169I	1.000	40	0%	40	50%	0	-	benign(0)	tolerated(0.06)	neutral(0.323)	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ
ZNF831	128611	genome.wustl.edu	37	20	57768569	57768569	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178457.1	+1	provisional	p.S832I	0.000	14	0%	23	34.8%	0	-	benign(0.074)	tolerated(0.07)	neutral(0.324)	NULL
ZNF831	128611	genome.wustl.edu	37	20	57769124	57769124	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178457.1	+1	provisional	p.R1017I	0.000	10	0%	16	50%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
ZNF831	128611	genome.wustl.edu	37	20	57829637	57829637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178457.1	+1	provisional	p.D1625Y	0.002	62	0%	29	27.6%	0	-	probably_damaging(0.981)	deleterious(0.02)	deleterious(0.808)	NULL
PHACTR3	116154	genome.wustl.edu	37	20	58420270	58420270	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080672.3	+1	reviewed	p.E538	1.000	209	0%	53	35.8%	0	-	-	-	-	NULL
SYCP2	10388	genome.wustl.edu	37	20	58444983	58444983	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014258.2	-1	reviewed	p.S1204Y	0.004	696	0%	146	37%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
SYCP2	10388	genome.wustl.edu	37	20	58467646	58467646	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014258.2	-1	reviewed	p.S635L	0.024	331	0.3%	91	40.7%	0	-	benign(0.001)	tolerated(0.49)	neutral(0.011)	NULL
SYCP2	10388	genome.wustl.edu	37	20	58491541	58491541	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014258.2	-1	reviewed	p.E171D	1.000	317	0%	118	45.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CDH4	1002	genome.wustl.edu	37	20	60348142	60348142	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001794.2	+1	reviewed	p.N160	0.000	11	0%	13	46.2%	0	-	-	-	-	superfamily_Cadherin
TAF4	6874	genome.wustl.edu	37	20	60574046	60574046	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003185.3	-1	reviewed	p.A969V	1.000	44	0%	37	16.2%	22	18.1%	possibly_damaging(0.924)	tolerated(0.07)	deleterious(0.692)	HMMPfam_TAF4
PSMA7	5688	genome.wustl.edu	37	20	60713283	60713283	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002792.2	-1	reviewed	p.E179K	1.000	73	0%	53	56.6%	373	40.4%	benign(0.205)	tolerated(0.22)	neutral(0.062)	HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SS18L1	26039	genome.wustl.edu	37	20	60749652	60749652	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198935.1	+1	validated	p.P372	0.517	9	0.000	14	0.429	21	57.1%	-	-	-	NULL
GTPBP5	26164	genome.wustl.edu	37	20	60773900	60773900	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015666.3	+1	validated	p.A227T	1.000	18	0%	20	60%	13	46.1%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_MMR_HSR1,superfamily_SSF52540
ADRM1	11047	genome.wustl.edu	37	20	60881358	60881358	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007002.2	+1	reviewed	p.E146K	1.000	42	0%	26	26.9%	89	41.5%	unknown(0)	tolerated(0.19)	-	HMMPfam_ARM_1
LAMA5	3911	genome.wustl.edu	37	20	60886294	60886294	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005560.3	-1	reviewed	p.R3338*	0.000	28	0%	15	46.7%	49	18.3%	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
LAMA5	3911	genome.wustl.edu	37	20	60887319	60887319	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005560.3	-1	reviewed	p.S3138	0.000	7	0.000	13	0.538	69	75.3%	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
LAMA5	3911	genome.wustl.edu	37	20	60899543	60899543	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005560.3	-1	reviewed	p.C1866Y	1.000	12	0%	12	50%	18	72.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_EGF/Laminin
C20orf166	128826	genome.wustl.edu	37	20	61162242	61162242	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178463.3	+1	validated	p.A19T	0.000	15	6.7%	19	31.6%	0	-	benign(0.063)	-	-	NULL
LOC100127888	100127888	genome.wustl.edu	37	20	61296588	61296588	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_024470.1	-1	validated	NULL	0.000	12	0%	27	33.3%	0	-	-	-	-	-
SLCO4A1	28231	genome.wustl.edu	37	20	61299371	61299371	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016354.3	+1	validated	p.R549L	0.991	215	0%	159	45.9%	7	14.2%	-	-	-	HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors
SLCO4A1	28231	genome.wustl.edu	37	20	61300302	61300302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016354.3	+1	validated	p.A633T	1.000	11	0%	12	41.7%	5	40%	unknown(0)	tolerated(0.12)	-	HMMPfam_OATP,superfamily_MFS general substrate transporter
C20orf20	55257	genome.wustl.edu	37	20	61430837	61430837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018270.4	+1	validated	p.A153S	0.731	108	0%	77	19.5%	25	20%	benign(0.03)	tolerated(0.67)	neutral(0.004)	NULL
DIDO1	11083	genome.wustl.edu	37	20	61513033	61513033	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033081.1	-1	reviewed	p.A1425	0.843	29	3.4%	28	50%	18	55.5%	-	-	-	NULL
DIDO1	11083	genome.wustl.edu	37	20	61542423	61542423	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033081.1	-1	reviewed	p.L181R	0.000	30	0%	31	22.6%	10	30%	possibly_damaging(0.948)	deleterious(0.04)	deleterious(0.740)	NULL
C20orf11	54994	genome.wustl.edu	37	20	61574981	61574981	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017896.2	+1	validated	p.L150	1.000	12	0%	11	36.4%	73	52%	-	-	-	HMMSmart_CRA,HMMPfam_RanBPM_CRA
COL20A1	57642	genome.wustl.edu	37	20	61943789	61943789	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020882.2	+1	validated	p.N607	0.000	31	0%	18	27.8%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
COL20A1	57642	genome.wustl.edu	37	20	61947977	61947977	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020882.2	+1	validated	p.P866L	0.999	13	0%	20	45%	0	-	possibly_damaging(0.949)	deleterious(0)	deleterious(0.838)	HMMSmart_SM00210
CHRNA4	1137	genome.wustl.edu	37	20	61981062	61981062	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000744.5	-1	reviewed	p.A567	0.375	6	0.000	20	0.400	0	-	-	-	-	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
CHRNA4	1137	genome.wustl.edu	37	20	61982034	61982034	+	Silent	SNP	C	C	T	rs121912253		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000744.5	-1	reviewed	p.P243	0.016	113	0%	112	46.4%	0	-	-	-	-	superfamily_Neu_channel_TM,HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
PTK6	5753	genome.wustl.edu	37	20	62164986	62164986	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005975.2	-1	reviewed	p.K196N	1.000	27	0%	26	30.8%	0	-	benign(0.268)	deleterious(0)	deleterious(0.473)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like,superfamily_SSF55550
SRMS	6725	genome.wustl.edu	37	20	62172312	62172312	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080823.2	-1	provisional	p.G442	0.130	11	0.000	9	0.556	6	100%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
ZGPAT	84619	genome.wustl.edu	37	20	62366577	62366577	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032527.3	+1	validated	p.S373L	1.000	12	0.000	6	0.667	37	32.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_G-patch,HMMSmart_SM00443
RGS19	10287	genome.wustl.edu	37	20	62708236	62708236	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005873.2	-1	reviewed	p.P2S	1.000	6	0.000	7	0.571	12	41.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
MYT1	4661	genome.wustl.edu	37	20	62839375	62839375	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004535.2	+1	reviewed	p.E276*	0.669	17	0%	11	45.5%	0	-	-	-	-	NULL
MYT1	4661	genome.wustl.edu	37	20	62871130	62871130	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004535.2	+1	reviewed	p.K1037N	0.976	32	0%	39	51.3%	0	-	probably_damaging(0.998)	tolerated(0.17)	deleterious(0.533)	NULL
PCMTD2	55251	genome.wustl.edu	37	20	62891427	62891427	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018257.2	+1	validated	p.D37N	1.000	59	0%	35	48.6%	15	40%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	HMMPfam_PCMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
TPTE	7179	genome.wustl.edu	37	21	10916378	10916378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199261.2	-1	validated	p.S423L	0.790	459	0%	155	16.1%	0	-	probably_damaging(0.975)	deleterious(0.04)	deleterious(0.766)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
TPTE	7179	genome.wustl.edu	37	21	10920134	10920134	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199261.2	-1	validated	p.T374A	0.950	868	0%	306	20.3%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_(Phosphotyrosine protein) phosphatases II
TPTE	7179	genome.wustl.edu	37	21	10942714	10942714	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_199261.2	-1	validated	p.T243A	1.000	719	0%	325	23.7%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_(Phosphotyrosine protein) phosphatases II
SAMSN1	64092	genome.wustl.edu	37	21	15882740	15882740	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022136.3	-1	validated	p.S151N	1.000	69	0%	50	44%	5	0%	probably_damaging(0.998)	tolerated(0.08)	deleterious(0.774)	superfamily_SH3-domain
NRIP1	8204	genome.wustl.edu	37	21	16337281	16337281	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003489.3	-1	reviewed	p.S1078Y	0.993	273	0%	110	54.5%	3	33.3%	benign(0.341)	deleterious(0.02)	deleterious(0.490)	NULL
NRIP1	8204	genome.wustl.edu	37	21	16339171	16339171	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003489.3	-1	reviewed	p.R448Q	0.998	267	0.4%	118	48.3%	5	60%	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	NULL
USP25	29761	genome.wustl.edu	37	21	17197304	17197304	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013396.3	+1	validated	p.E410K	1.000	347	0%	85	48.2%	9	44.4%	benign(0.285)	tolerated(0.12)	neutral(0.348)	HMMPfam_UCH,superfamily_Cysteine proteinases
USP25	29761	genome.wustl.edu	37	21	17236703	17236703	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013396.3	+1	validated	p.K818N	1.000	267	0%	104	37.5%	5	40%	possibly_damaging(0.564)	tolerated(0.07)	deleterious(0.512)	NULL
USP25	29761	genome.wustl.edu	37	21	17250741	17250741	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013396.3	+1	validated	p.R1039*	1.000	160	0%	79	40.5%	37	48.6%	-	-	-	NULL
MIR99A	407055	genome.wustl.edu	37	21	17911477	17911477	+	RNA	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000384906	+1	known	NULL	1.000	143	0%	55	45.5%	0	-	-	-	-	-
TMPRSS15	5651	genome.wustl.edu	37	21	19651373	19651373	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002772.2	-1	reviewed	p.Y891C	1.000	285	0%	121	43.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
MRPL39	54148	genome.wustl.edu	37	21	26972138	26972138	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080794.3	-1	reviewed	p.S187	0.996	244	0%	122	17.2%	51	15.6%	-	-	-	superfamily_ThrRS/AlaRS common domain
MRPL39	54148	genome.wustl.edu	37	21	26978793	26978793	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080794.3	-1	reviewed	p.K83T	1.000	187	0%	108	39.8%	44	54.5%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_TGS
ATP5J	522	genome.wustl.edu	37	21	27102074	27102074	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003701.1	-1	reviewed	p.S19Y	0.999	152	0%	77	45.5%	413	49.6%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
GABPA	2551	genome.wustl.edu	37	21	27137092	27137092	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002040.3	+1	validated	p.A377V	1.000	139	0%	27	18.5%	16	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	"HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_2,superfamily_""Winged helix"" DNA-binding domain"
APP	351	genome.wustl.edu	37	21	27327992	27327992	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000448850	-1	known	p.R415*	0.997	171	0%	106	43.4%	425	37.4%	-	-	-	superfamily_CAPPD an extracellular domain of amyloid beta A4 protein
ADAMTS5	11096	genome.wustl.edu	37	21	28302336	28302336	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007038.3	-1	reviewed	p.C698	0.654	90	0%	34	14.7%	3	33.3%	-	-	-	NULL
RWDD2B	10069	genome.wustl.edu	37	21	30380363	30380363	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016940.2	-1	validated	p.D148E	0.588	92	0%	95	10.5%	21	23.8%	benign(0)	tolerated(1)	-	HMMPfam_RWD,HMMSmart_RWD,superfamily_UBQ-conjugat/RWD-like
USP16	10600	genome.wustl.edu	37	21	30419452	30419452	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001032410.1	+1	reviewed	p.E607D	0.992	140	0%	62	35.5%	20	35%	probably_damaging(0.969)	tolerated(0.07)	deleterious(0.730)	HMMPfam_UCH,superfamily_Cysteine proteinases
BACH1	571	genome.wustl.edu	37	21	30693729	30693729	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001186.2	+1	reviewed	p.Q43R	0.229	50	2%	47	38.3%	6	16.6%	benign(0.001)	tolerated(0.72)	neutral(0.002)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
BACH1	571	genome.wustl.edu	37	21	30698920	30698920	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001186.2	+1	reviewed	p.S259P	0.000	46	0%	24	41.7%	7	28.5%	benign(0.001)	tolerated(0.17)	neutral(0.059)	NULL
BACH1	571	genome.wustl.edu	37	21	30699416	30699416	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001186.2	+1	reviewed	p.G424D	0.000	73	0%	35	42.9%	11	36.3%	benign(0.026)	tolerated(1)	neutral(0.001)	NULL
BACH1	571	genome.wustl.edu	37	21	30701856	30701856	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001186.2	+1	reviewed	p.D540Y	1.000	276	0%	107	48.6%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_A DNA-binding domain in eukaryotic transcription factors
KRTAP27-1	643812	genome.wustl.edu	37	21	31709461	31709461	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077711.1	-1	provisional	p.L176M	0.000	103	0%	46	21.7%	0	-	benign(0.012)	tolerated(0.17)	neutral(0.059)	HMMPfam_PMG
KRTAP27-1	643812	genome.wustl.edu	37	21	31709534	31709534	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077711.1	-1	provisional	p.F151	0.135	129	0%	55	36.4%	0	-	-	-	-	HMMPfam_PMG
KRTAP13-4	284827	genome.wustl.edu	37	21	31803039	31803039	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181600.1	+1	provisional	p.P149L	0.680	129	0%	66	48.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PMG
KRTAP6-3	337968	genome.wustl.edu	37	21	31964993	31964993	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181605.3	+1	validated	p.D77H	0.705	112	0%	91	29.7%	0	-	unknown(0)	-	-	NULL
TIAM1	7074	genome.wustl.edu	37	21	32503248	32503248	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003253.2	-1	validated	p.V1301A	1.000	448	0%	180	16.1%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
SCAF4	57466	genome.wustl.edu	37	21	33044192	33044192	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020706.2	-1	reviewed	p.R988	1.000	154	0%	111	46.8%	24	50%	-	-	-	NULL
SCAF4	57466	genome.wustl.edu	37	21	33044520	33044520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020706.2	-1	reviewed	p.R879H	0.994	15	0%	24	33.3%	26	46.1%	unknown(0)	deleterious(0.02)	-	NULL
SCAF4	57466	genome.wustl.edu	37	21	33060695	33060695	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020706.2	-1	reviewed	p.S656	0.935	454	0%	233	40.8%	41	43.9%	-	-	-	NULL
URB1	9875	genome.wustl.edu	37	21	33757950	33757950	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014825.2	-1	validated	p.E62D	0.429	276	0%	144	41%	2	0%	possibly_damaging(0.452)	tolerated(0.39)	neutral(0.164)	NULL
C21orf63	59271	genome.wustl.edu	37	21	33840090	33840090	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058187.3	+1	validated	p.T190A	0.045	74	0%	43	39.5%	13	46.1%	benign(0)	tolerated(0.64)	neutral(0.003)	HMMPfam_Gal_Lectin
C21orf62	56245	genome.wustl.edu	37	21	34166319	34166319	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000479548	-1	known	p.Q138H	0.996	109	0%	46	43.5%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
IFNAR2	3455	genome.wustl.edu	37	21	34614192	34614192	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000447980	+1	known	p.C13G	0.814	249	0%	128	38.3%	8	50%	unknown(0)	-	-	NULL
IFNAR1	3454	genome.wustl.edu	37	21	34717639	34717639	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000629.2	+1	reviewed	p.N254S	0.061	412	0.2%	184	46.2%	19	52.6%	benign(0.103)	tolerated(0.15)	neutral(0.249)	superfamily_Fibronectin type III
IFNGR2	3460	genome.wustl.edu	37	21	34804627	34804627	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000421802	+1	known	p.T1M	0.001	108	0%	49	28.6%	50	28%	-	-	-	NULL
GART	2618	genome.wustl.edu	37	21	34889717	34889717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000819.4	-1	reviewed	p.S634Y	0.988	166	0%	101	42.6%	40	45%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_AIRS_C,superfamily_PurM C-terminal domain-like
GART	2618	genome.wustl.edu	37	21	34903156	34903156	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000819.4	-1	reviewed	p.P211L	0.994	34	0%	28	42.9%	52	42.3%	benign(0.02)	deleterious(0)	neutral(0.446)	HMMPfam_GARS_A,superfamily_Glutathione synthetase ATP-binding domain-like
SON	6651	genome.wustl.edu	37	21	34923936	34923936	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138927.1	+1	reviewed	p.S800Y	1.000	117	0%	84	44%	73	49.3%	probably_damaging(0.977)	deleterious(0)	deleterious(0.863)	NULL
ITSN1	6453	genome.wustl.edu	37	21	35094914	35094914	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003024.2	+1	reviewed	p.F48C	1.000	505	0%	174	35.6%	6	100%	unknown(0)	deleterious(0)	-	HMMSmart_SM00027,superfamily_EF-hand
ITSN1	6453	genome.wustl.edu	37	21	35124114	35124114	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003024.2	+1	reviewed	e6-1	0.999	354	0%	137	43.1%	0	-	-	-	-	-
ITSN1	6453	genome.wustl.edu	37	21	35172208	35172208	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003024.2	+1	reviewed	p.T760I	0.979	170	0%	94	41.5%	10	80%	probably_damaging(0.956)	deleterious(0)	deleterious(0.844)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
ATP5O	539	genome.wustl.edu	37	21	35279737	35279737	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001697.2	-1	reviewed	p.R117*	1.000	86	1.2%	51	31.4%	249	1.6%	-	-	-	HMMPfam_OSCP,superfamily_N-terminal domain of the delta subunit of the F1F0-ATP synthase
KCNE1	3753	genome.wustl.edu	37	21	35821804	35821804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000219.3	-1	reviewed	p.E43D	0.888	17	0%	21	23.8%	0	-	benign(0.026)	tolerated(0.19)	neutral(0.051)	HMMPfam_ISK_Channel
SETD4	54093	genome.wustl.edu	37	21	37416242	37416242	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017438.3	-1	validated	p.F247L	0.998	218	0%	93	46.2%	22	27.2%	probably_damaging(0.994)	deleterious(0.05)	deleterious(0.797)	HMMPfam_SET,superfamily_SET domain
SETD4	54093	genome.wustl.edu	37	21	37431181	37431181	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017438.3	-1	validated	p.Q2	0.927	582	0%	320	42.2%	2	0%	-	-	-	NULL
DOPEY2	9980	genome.wustl.edu	37	21	37617485	37617485	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005128.2	+1	validated	p.A1069	0.346	18	0%	11	36.4%	2	0%	-	-	-	NULL
MORC3	23515	genome.wustl.edu	37	21	37711196	37711196	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015358.2	+1	reviewed	p.R195S	0.998	95	1.1%	41	9.8%	6	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	superfamily_ATP_bd_ATPase
MORC3	23515	genome.wustl.edu	37	21	37744698	37744698	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015358.2	+1	reviewed	p.S845	0.998	357	0%	153	43.1%	17	41.1%	-	-	-	NULL
MORC3	23515	genome.wustl.edu	37	21	37747485	37747485	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015358.2	+1	reviewed	p.A904V	0.996	241	0%	121	12.4%	16	18.7%	probably_damaging(0.955)	tolerated(0.36)	neutral(0.419)	NULL
CHAF1B	8208	genome.wustl.edu	37	21	37781718	37781718	+	Missense_Mutation	SNP	C	C	T	rs140663225		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005441.2	+1	reviewed	p.R292C	1.000	83	0%	66	45.5%	17	58.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40_like
HLCS	3141	genome.wustl.edu	37	21	38302694	38302694	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000411.5	-1	reviewed	p.T346P	0.001	243	0%	116	41.4%	17	41.1%	possibly_damaging(0.455)	tolerated(0.22)	neutral(0.191)	NULL
HLCS	3141	genome.wustl.edu	37	21	38309057	38309057	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000411.5	-1	reviewed	p.Y230H	0.000	40	0%	33	45.5%	17	23.5%	benign(0)	tolerated(0.3)	neutral(0.029)	NULL
HLCS	3141	genome.wustl.edu	37	21	38309482	38309482	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000411.5	-1	reviewed	p.D88G	0.000	50	0%	36	36.1%	10	30%	benign(0.025)	tolerated(0.09)	neutral(0.297)	NULL
PIGP	51227	genome.wustl.edu	37	21	38437918	38437918	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153681.2	-1	reviewed	p.F147L	1.000	563	0%	275	48.4%	15	40%	benign(0.001)	tolerated(1)	-	HMMPfam_PIG-P
TTC3	7267	genome.wustl.edu	37	21	38467732	38467732	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001894.1	+1	validated	p.A257V	1.000	272	0%	90	38.9%	10	30%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452
TTC3	7267	genome.wustl.edu	37	21	38498384	38498384	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001894.1	+1	validated	p.A413V	0.000	207	0.5%	119	44.5%	44	54.5%	benign(0)	tolerated(0.19)	neutral(0.050)	superfamily_Spectrin,superfamily_SSF48452
TTC3	7267	genome.wustl.edu	37	21	38537997	38537997	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001894.1	+1	validated	p.R1161C	1.000	285	0%	132	38.6%	42	35.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Spectrin,superfamily_SSF48452
KCNJ15	3772	genome.wustl.edu	37	21	39672183	39672183	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002243.3	+1	reviewed	p.R334W	1.000	91	0%	64	43.8%	0	-	probably_damaging(0.997)	tolerated(0.12)	deleterious(0.727)	HMMPfam_IRK,superfamily_Ig_E-set
ETS2	2114	genome.wustl.edu	37	21	40185002	40185002	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005239.4	+1	validated	p.Q50*	1.000	209	0%	140	45.7%	100	46%	-	-	-	NULL
BRWD1	54014	genome.wustl.edu	37	21	40559237	40559237	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018963.3	-1	reviewed	p.V2226	0.110	285	0%	145	41.4%	4	75%	-	-	-	superfamily_WD40 repeat-like
BRWD1	54014	genome.wustl.edu	37	21	40570816	40570816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018963.3	-1	reviewed	p.M1842I	0.000	233	0%	85	50.6%	6	33.3%	benign(0.002)	tolerated(0.34)	neutral(0.023)	superfamily_WD40 repeat-like
LCA5L	150082	genome.wustl.edu	37	21	40777929	40777929	+	Missense_Mutation	SNP	G	G	A	rs144695121	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152505.3	-1	validated	p.S631L	0.000	119	0%	51	47.1%	0	-	benign(0)	tolerated(0.25)	neutral(0.037)	NULL
C21orf88	114041	genome.wustl.edu	37	21	40984233	40984233	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000380612	-1	known	p.G20	0.000	31	0%	23	47.8%	0	-	-	-	-	NULL
DSCAM	1826	genome.wustl.edu	37	21	41719861	41719861	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001389.3	-1	validated	p.A316S	1.000	114	0%	41	46.3%	0	-	benign(0.314)	tolerated(0.09)	neutral(0.394)	superfamily_Immunoglobulin
MX2	4600	genome.wustl.edu	37	21	42749778	42749778	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002463.1	+1	reviewed	p.I104	0.980	24	0%	22	50%	0	-	-	-	-	HMMSmart_DYNc,superfamily_SSF52540
LOC100288709	100288709	genome.wustl.edu	37	21	42839636	42839636	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343746.1	+1	model	p.Q12H	0.000	82	0%	71	43.7%	1	100%	-	-	-	NULL
TMPRSS2	7113	genome.wustl.edu	37	21	42861455	42861455	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005656.3	-1	reviewed	p.A102T	0.001	41	0%	37	51.4%	19	26.3%	benign(0.005)	tolerated(0.16)	neutral(0.059)	NULL
RIPK4	54101	genome.wustl.edu	37	21	43166043	43166043	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000352483	-1	known	p.C319Y	0.000	114	0%	66	45.5%	0	-	possibly_damaging(0.604)	deleterious(0)	deleterious(0.654)	NULL
PRDM15	63977	genome.wustl.edu	37	21	43230645	43230645	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022115.3	-1	validated	p.Y1205	1.000	13	0%	21	33.3%	5	60%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
C21orf128	150147	genome.wustl.edu	37	21	43522542	43522542	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_027243.1	-1	validated	NULL	0.000	5	0.000	8	0.500	0	-	-	-	-	-
UMODL1	89766	genome.wustl.edu	37	21	43524014	43524014	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173568.3	+1	validated	p.Y446H	0.002	53	0%	65	15.4%	0	-	benign(0.226)	deleterious(0)	neutral(0.467)	HMMPfam_SEA,superfamily_SEA domain
UMODL1	89766	genome.wustl.edu	37	21	43539358	43539358	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173568.3	+1	validated	p.E999	0.432	56	0%	47	10.6%	0	-	-	-	-	HMMPfam_SEA
TMPRSS3	64699	genome.wustl.edu	37	21	43809146	43809146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024022.2	-1	reviewed	p.D72N	1.000	56	0%	30	43.3%	5	40%	benign(0.001)	tolerated(0.3)	neutral(0.029)	HMMSmart_SM00192,superfamily_LDL receptor-like module
SLC37A1	54020	genome.wustl.edu	37	21	43959695	43959695	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018964.3	+1	reviewed	p.A142T	0.981	112	0%	90	42.2%	12	50%	benign(0.014)	tolerated(0.37)	neutral(0.019)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
NDUFV3	4731	genome.wustl.edu	37	21	44323482	44323482	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021075.3	+1	reviewed	p.T120	0.458	154	0%	105	42.9%	8	50%	-	-	-	NULL
PDXK	8566	genome.wustl.edu	37	21	45165994	45165994	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003681.4	+1	reviewed	p.G122	0.965	186	0%	190	14.2%	202	10.3%	-	-	-	superfamily_Ribokinase-like
PWP2	5822	genome.wustl.edu	37	21	45537717	45537717	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005049.2	+1	validated	p.E285*	1.000	126	0%	100	47%	11	36.3%	-	-	-	HMMSmart_WD40,superfamily_Peptidase_S9A_N,superfamily_WD40_like
TRPM2	7226	genome.wustl.edu	37	21	45821610	45821610	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003307.3	+1	reviewed	p.A790T	1.000	24	0%	38	44.7%	2	0%	possibly_damaging(0.808)	tolerated(0.44)	neutral(0.317)	NULL
TSPEAR	54084	genome.wustl.edu	37	21	45941818	45941818	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144991.2	-1	provisional	p.S505L	1.000	38	0%	60	48.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KRTAP10-5	386680	genome.wustl.edu	37	21	46000305	46000305	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198694.2	-1	reviewed	p.C51R	0.624	17	0%	24	45.8%	0	-	unknown(0)	deleterious(0)	-	NULL
ITGB2	3689	genome.wustl.edu	37	21	46306799	46306799	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000211.3	-1	reviewed	p.N700S	0.761	14	0%	12	50%	37	2.7%	benign(0.108)	deleterious(0.01)	neutral(0.414)	HMMPfam_Integrin_B_tail
POFUT2	23275	genome.wustl.edu	37	21	46705704	46705704	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_133635.4	-1	validated	p.H91N	1.000	58	0%	40	50%	13	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_O-FucT
COL6A2	1292	genome.wustl.edu	37	21	47536579	47536579	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001849.3	+1	reviewed	p.A314	0.029	7	0.000	16	0.500	59	0%	-	-	-	HMMPfam_Collagen
PCNT	5116	genome.wustl.edu	37	21	47860968	47860968	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418394	+1	known	p.R179Q	0.000	110	0%	89	56.2%	12	8.3%	-	-	-	HMMPfam_PACT_coil_coil
DIP2A	23181	genome.wustl.edu	37	21	47910620	47910620	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015151.3	+1	reviewed	p.R91C	1.000	42	0%	45	35.6%	13	61.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DMAP_binding
DIP2A	23181	genome.wustl.edu	37	21	47918501	47918501	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015151.3	+1	reviewed	p.S137L	1.000	23	0%	24	33.3%	5	60%	probably_damaging(0.986)	deleterious(0.01)	deleterious(0.840)	NULL
DIP2A	23181	genome.wustl.edu	37	21	47949019	47949019	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015151.3	+1	reviewed	p.R373W	1.000	195	0%	66	39.4%	3	66.6%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
DIP2A	23181	genome.wustl.edu	37	21	47954542	47954542	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015151.3	+1	reviewed	p.S528	0.997	39	0%	33	42.4%	11	27.2%	-	-	-	superfamily_Acetyl-CoA synthetase-like
DIP2A	23181	genome.wustl.edu	37	21	47985693	47985693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015151.3	+1	reviewed	p.A1411V	0.999	24	0%	36	52.8%	24	41.6%	possibly_damaging(0.738)	tolerated(0.26)	neutral(0.304)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
LOC729057	729057	genome.wustl.edu	37	22	16123763	16123763	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XR_042044.2	+1	model	NULL	0.999	31	0%	41	14.6%	3	66.6%	-	-	-	-
POTEH	23784	genome.wustl.edu	37	22	16266974	16266974	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136213.1	-1	provisional	p.P492L	0.000	1103	0%	473	15.6%	1	0%	probably_damaging(0.999)	tolerated(0.21)	deleterious(0.534)	NULL
POTEH	23784	genome.wustl.edu	37	22	16267047	16267047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136213.1	-1	provisional	p.E468K	0.095	1971	0.1%	727	16%	1	0%	probably_damaging(0.964)	deleterious(0.01)	deleterious(0.812)	NULL
POTEH	23784	genome.wustl.edu	37	22	16287405	16287405	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136213.1	-1	provisional	p.D161N	0.000	179	0%	152	32.9%	1	0%	possibly_damaging(0.779)	deleterious(0.01)	deleterious(0.697)	superfamily_ANK
POTEH	23784	genome.wustl.edu	37	22	16287421	16287421	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136213.1	-1	provisional	p.G155	0.004	166	0%	149	24.2%	2	50%	-	-	-	superfamily_ANK
POTEH	23784	genome.wustl.edu	37	22	16287695	16287695	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136213.1	-1	provisional	p.W64*	0.000	74	0%	78	29.5%	1	0%	-	-	-	NULL
CCT8L2	150160	genome.wustl.edu	37	22	17072916	17072916	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014406.4	-1	validated	p.S175	0.000	27	0%	47	40.4%	0	-	-	-	-	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL-intermediate domain like
CCT8L2	150160	genome.wustl.edu	37	22	17073402	17073402	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014406.4	-1	validated	p.Q13	0.147	11	0%	16	37.5%	0	-	-	-	-	NULL
IL17RA	23765	genome.wustl.edu	37	22	17589746	17589746	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014339.4	+1	reviewed	p.R546H	0.979	4	0.000	9	0.667	12	50%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
LOC100288065	100288065	genome.wustl.edu	37	22	18066150	18066150	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002344192.1	-1	model	p.R148H	0.000	30	0%	22	36.4%	0	-	-	-	-	NULL
ATP6V1E1	529	genome.wustl.edu	37	22	18081038	18081038	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001696.3	-1	reviewed	p.A151V	1.000	125	0%	80	57.5%	110	41.8%	benign(0.052)	tolerated(0.12)	neutral(0.264)	HMMPfam_vATP-synt_E
MICAL3	57553	genome.wustl.edu	37	22	18273993	18273993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015241.2	-1	provisional	p.R1909C	1.000	24	0%	30	40%	24	58.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ENSG00000093100	0	genome.wustl.edu	37	22	18300402	18300402	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000252134	-1	known	p.R657H	0.002	28	0%	28	35.7%	9	33.3%	-	-	-	NULL
ENSG00000093100	0	genome.wustl.edu	37	22	18300971	18300971	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000252134	-1	known	p.W467*	0.000	14	0%	11	54.5%	2	0%	benign(0)	tolerated(1)	-	NULL
MICAL3	57553	genome.wustl.edu	37	22	18369955	18369955	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015241.2	-1	provisional	p.K683T	1.000	431	0.2%	259	47.1%	5	20%	probably_damaging(0.989)	deleterious(0.02)	deleterious(0.823)	NULL
ENSG00000093100	0	genome.wustl.edu	37	22	18382204	18382204	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000432220	-1	known	p.G320R	0.003	273	0%	153	45.1%	1	100%	-	-	-	NULL
TUBA8	51807	genome.wustl.edu	37	22	18604249	18604249	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018943.1	+1	provisional	p.E3*	1.000	18	0%	15	46.7%	4	75%	-	-	-	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like
USP18	11274	genome.wustl.edu	37	22	18644563	18644563	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017414.3	+1	validated	p.T87	0.532	30	0%	17	47.1%	8	25%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
PRODH	5625	genome.wustl.edu	37	22	18900848	18900848	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016335.3	-1	reviewed	p.Y548C	0.999	9	0.000	14	0.500	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Pro_dh,superfamily_FAD-linked oxidoreductase
PRODH	5625	genome.wustl.edu	37	22	18912570	18912570	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016335.3	-1	reviewed	p.A221T	1.000	22	0%	36	27.8%	1	0%	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	superfamily_FAD-linked oxidoreductase
PRODH	5625	genome.wustl.edu	37	22	18918569	18918569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016335.3	-1	reviewed	p.S139N	1.000	29	0%	30	16.7%	0	-	benign(0.002)	tolerated(0.44)	neutral(0.013)	superfamily_FAD-linked oxidoreductase
DGCR14	8220	genome.wustl.edu	37	22	19122634	19122634	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022719.2	-1	reviewed	p.A364T	0.999	27	0%	18	27.8%	27	40.7%	benign(0.02)	deleterious(0.02)	neutral(0.384)	HMMPfam_Es2
CLTCL1	8218	genome.wustl.edu	37	22	19220116	19220116	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007098.3	-1	reviewed	p.G509	0.982	39	0%	22	36.4%	1	0%	-	-	-	superfamily_ARM repeat
CLTCL1	8218	genome.wustl.edu	37	22	19226858	19226858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007098.3	-1	reviewed	p.K245N	1.000	194	0%	116	37.9%	1	0%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	superfamily_Clathrin heavy-chain terminal domain
CLTCL1	8218	genome.wustl.edu	37	22	19230386	19230386	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007098.3	-1	reviewed	p.A198V	1.000	72	0%	68	48.5%	2	0%	probably_damaging(0.999)	tolerated(0.18)	deleterious(0.546)	HMMPfam_Clathrin_propel,superfamily_Clathrin heavy-chain terminal domain
UFD1L	7353	genome.wustl.edu	37	22	19438243	19438243	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005659.6	-1	reviewed	p.A292T	1.000	207	0%	124	13.7%	62	19.3%	benign(0.208)	tolerated(0.27)	neutral(0.054)	NULL
SEPT5	5413	genome.wustl.edu	37	22	19707850	19707850	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002688.4	+1	reviewed	p.P124S	1.000	71	0%	61	14.8%	41	26.8%	benign(0.024)	deleterious(0.03)	neutral(0.365)	HMMPfam_Septin,superfamily_SSF52540
DGCR8	54487	genome.wustl.edu	37	22	20074159	20074159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022720.5	+1	validated	p.V225I	1.000	60	0%	41	39%	13	38.4%	benign(0)	tolerated(0.09)	neutral(0.296)	NULL
DGCR8	54487	genome.wustl.edu	37	22	20080388	20080388	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022720.5	+1	validated	p.S555P	1.000	139	0%	105	45.7%	8	62.5%	benign(0.256)	deleterious(0.01)	neutral(0.432)	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like
ZDHHC8	29801	genome.wustl.edu	37	22	20129007	20129007	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013373.3	+1	reviewed	p.A360D	0.176	13	0%	20	40%	50	42%	possibly_damaging(0.595)	deleterious(0)	deleterious(0.650)	NULL
RIMBP3	85376	genome.wustl.edu	37	22	20456883	20456883	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015672.1	-1	validated	p.K1473N	0.509	61	0%	91	28.6%	0	-	benign(0.001)	deleterious(0.04)	neutral(0.349)	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2
RIMBP3	85376	genome.wustl.edu	37	22	20457633	20457633	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015672.1	-1	validated	p.P1223	0.039	100	0%	132	15.2%	0	-	-	-	-	NULL
RIMBP3	85376	genome.wustl.edu	37	22	20457734	20457734	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015672.1	-1	validated	p.R1190*	0.000	182	0%	181	17.7%	0	-	-	-	-	NULL
RIMBP3	85376	genome.wustl.edu	37	22	20457852	20457852	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015672.1	-1	validated	p.F1150L	0.078	182	0%	222	12.6%	1	0%	benign(0)	tolerated(1)	-	superfamily_Fibronectin type III
ZNF74	7625	genome.wustl.edu	37	22	20760278	20760278	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003426.2	+1	validated	p.L319I	0.765	4	0.000	9	0.556	28	57.1%	probably_damaging(0.963)	deleterious(0.01)	deleterious(0.811)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
KLHL22	84861	genome.wustl.edu	37	22	20796445	20796445	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032775.2	-1	validated	p.D607G	0.340	11	0%	15	33.3%	40	45%	possibly_damaging(0.711)	tolerated(0.5)	neutral(0.267)	NULL
MED15	51586	genome.wustl.edu	37	22	20937677	20937677	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003891.1	+1	reviewed	p.K578T	0.988	43	0%	39	38.5%	67	47.7%	benign(0.04)	tolerated(0.06)	neutral(0.325)	NULL
TMEM191A	84222	genome.wustl.edu	37	22	21055416	21055416	+	RNA	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_026815.1	+1	predicted	NULL	0.136	204	0%	154	41.6%	0	-	-	-	-	-
PI4KA	5297	genome.wustl.edu	37	22	21064217	21064217	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_058004.2	-1	reviewed	p.G1993D	1.000	42	0%	44	43.2%	79	36.7%	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like)
SNAP29	9342	genome.wustl.edu	37	22	21242113	21242113	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004782.3	+1	reviewed	p.R256*	0.995	173	0%	83	47%	18	44.4%	-	-	-	HMMPfam_SNARE,HMMSmart_t_SNARE
LZTR1	8216	genome.wustl.edu	37	22	21350282	21350282	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006767.3	+1	reviewed	p.M700I	1.000	12	0%	17	41.2%	15	60%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
FLJ39582	353117	genome.wustl.edu	37	22	21363805	21363805	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_027051.1	+1	validated	NULL	0.000	23	0%	21	28.6%	0	-	-	-	-	-
HIC2	23119	genome.wustl.edu	37	22	21799248	21799248	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015094.2	+1	validated	p.D22N	1.000	17	0%	23	26.1%	0	-	possibly_damaging(0.798)	deleterious(0)	deleterious(0.745)	superfamily_POZ domain
PPIL2	23759	genome.wustl.edu	37	22	22040799	22040799	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_148176.2	+1	reviewed	p.A248T	1.000	28	0%	18	27.8%	46	34.7%	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	NULL
IGLV4-60	28785	genome.wustl.edu	37	22	22516874	22516874	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390284	+1	known	p.I54	0.000	59	0%	49	51%	2	0%	-	-	-	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
IGLV1-51	28820	genome.wustl.edu	37	22	22677218	22677218	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390290	+1	known	p.F82L	1.000	64	0%	41	48.8%	15	0%	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
IGLV1-40	28825	genome.wustl.edu	37	22	22764336	22764336	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390299	+1	known	p.P26	0.001	33	0%	36	30.6%	315	0%	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
IGLV1-36	28826	genome.wustl.edu	37	22	22786696	22786696	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000390301	+1	known	p.F82L	1.000	52	0%	42	45.2%	2	0%	benign(0.216)	deleterious(0.02)	neutral(0.404)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
ZNF280A	129025	genome.wustl.edu	37	22	22868375	22868375	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080740.3	-1	reviewed	p.A527D	0.000	165	0%	98	34.7%	0	-	benign(0.014)	deleterious(0)	neutral(0.445)	NULL
ZNF280A	129025	genome.wustl.edu	37	22	22869426	22869426	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080740.3	-1	reviewed	p.D177Y	0.003	99	0%	56	48.2%	0	-	benign(0.326)	deleterious(0.03)	neutral(0.466)	NULL
ZNF280A	129025	genome.wustl.edu	37	22	22869805	22869805	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080740.3	-1	reviewed	p.G50	0.001	298	0%	177	46.3%	0	-	-	-	-	NULL
BCR	613	genome.wustl.edu	37	22	23630291	23630291	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004327.3	+1	reviewed	p.T845M	0.989	128	0%	87	46%	74	51.3%	benign(0.321)	deleterious(0.02)	deleterious(0.484)	HMMSmart_SM00233,superfamily_PH domain-like
ZNF70	7621	genome.wustl.edu	37	22	24086261	24086261	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021916.2	-1	provisional	p.R356H	1.000	53	0%	46	21.7%	4	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF70	7621	genome.wustl.edu	37	22	24087156	24087156	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021916.2	-1	provisional	p.E58K	0.000	81	0%	69	43.5%	4	75%	benign(0.028)	deleterious(0.01)	neutral(0.407)	NULL
MMP11	4320	genome.wustl.edu	37	22	24122685	24122685	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005940.3	+1	reviewed	p.A160T	1.000	12	0%	20	30%	213	3.7%	benign(0)	tolerated(0.26)	neutral(0.034)	"HMMPfam_Peptidase_M10,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain"
SMARCB1	6598	genome.wustl.edu	37	22	24135837	24135837	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003073.3	+1	reviewed	p.K108	1.000	83	0%	55	38.2%	145	47.5%	-	-	-	NULL
CABIN1	23523	genome.wustl.edu	37	22	24564467	24564467	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012295.2	+1	reviewed	p.L1912R	0.997	21	0%	16	56.2%	78	50%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
SUSD2	56241	genome.wustl.edu	37	22	24579533	24579533	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019601.3	+1	validated	p.L120I	0.998	29	0%	28	60.7%	3	33.3%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
SUSD2	56241	genome.wustl.edu	37	22	24580200	24580200	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019601.3	+1	validated	p.S179I	0.044	39	0%	31	16.1%	5	20%	possibly_damaging(0.685)	tolerated(0.07)	deleterious(0.564)	NULL
GGT5	2687	genome.wustl.edu	37	22	24621268	24621268	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000425408	-1	known	p.R86*	0.298	30	0%	22	45.5%	8	12.5%	benign(0.062)	tolerated(0.22)	neutral(0.046)	HMMPfam_G_glu_transpept
SPECC1L	23384	genome.wustl.edu	37	22	24718656	24718656	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145468.1	+1	validated	p.A570T	1.000	77	0%	43	37.2%	4	25%	benign(0.073)	tolerated(0.23)	neutral(0.046)	NULL
SPECC1L	23384	genome.wustl.edu	37	22	24718657	24718657	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145468.1	+1	validated	p.A570V	1.000	75	0%	43	48.8%	4	50%	benign(0.184)	tolerated(0.08)	neutral(0.317)	NULL
C22orf13	83606	genome.wustl.edu	37	22	24943923	24943923	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031444.2	-1	validated	p.R83C	1.000	21	0%	20	35%	60	38.3%	benign(0.04)	tolerated(0.08)	neutral(0.302)	HMMPfam_Guanylate_cyc_2
PIWIL3	440822	genome.wustl.edu	37	22	25119195	25119195	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008496.2	-1	validated	p.K762N	1.000	419	0%	213	39.9%	0	-	possibly_damaging(0.929)	tolerated(0.06)	deleterious(0.699)	HMMPfam_Piwi,superfamily_RNaseH_fold
TMEM211	255349	genome.wustl.edu	37	22	25334189	25334189	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001663.1	-1	provisional	p.S18	0.990	50	0%	37	43.2%	3	0%	-	-	-	NULL
CRYBB2	1415	genome.wustl.edu	37	22	25625492	25625492	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000496.2	+1	reviewed	p.F132	1.000	99	0%	74	36.5%	18	5.5%	-	-	-	HMMPfam_Crystall,HMMSmart_XTALbg,superfamily_G_crystallin_SF
ADRBK2	157	genome.wustl.edu	37	22	26040576	26040576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005160.3	+1	reviewed	p.D70Y	1.000	391	0%	181	43.1%	1	0%	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
ADRBK2	157	genome.wustl.edu	37	22	26107120	26107120	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005160.3	+1	reviewed	p.K494R	1.000	259	0%	147	36.7%	10	40%	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	HMMSmart_S_TK_X,superfamily_Kinase_like
MYO18B	84700	genome.wustl.edu	37	22	26166887	26166887	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032608.5	+1	reviewed	p.R543M	1.000	54	0%	55	49.1%	0	-	probably_damaging(0.961)	deleterious(0.01)	deleterious(0.810)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO18B	84700	genome.wustl.edu	37	22	26317335	26317335	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032608.5	+1	reviewed	p.T1826P	0.931	41	0%	20	40%	0	-	benign(0.009)	tolerated(0.06)	neutral(0.323)	NULL
HPS4	89781	genome.wustl.edu	37	22	26860011	26860011	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022081.4	-1	reviewed	p.L529	0.000	22	0%	14	35.7%	17	41.1%	-	-	-	NULL
TTC28	23331	genome.wustl.edu	37	22	28378748	28378748	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145418.1	-1	validated	p.P2303S	1.000	63	0%	63	36.5%	15	53.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
TTC28	23331	genome.wustl.edu	37	22	28378833	28378833	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145418.1	-1	validated	p.C2274	0.001	35	0%	38	34.2%	16	62.5%	-	-	-	NULL
TTC28	23331	genome.wustl.edu	37	22	28379699	28379699	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145418.1	-1	validated	p.A1986T	0.999	33	0%	23	30.4%	14	64.2%	probably_damaging(0.99)	tolerated(0.12)	deleterious(0.702)	NULL
CHEK2	11200	genome.wustl.edu	37	22	29130405	29130405	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005735.1	-1	reviewed	p.G102V	1.000	74	0%	55	43.6%	17	35.2%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	superfamily_SMAD/FHA domain
HSCB	150274	genome.wustl.edu	37	22	29140689	29140689	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172002.3	+1	validated	p.Y140	1.000	107	0%	52	11.5%	11	9%	-	-	-	HMMPfam_DnaJ,superfamily_DnaJ_N
EWSR1	2130	genome.wustl.edu	37	22	29684600	29684600	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005243.3	+1	reviewed	p.F267I	1.000	64	0%	51	47.1%	148	37.1%	possibly_damaging(0.847)	deleterious(0.01)	deleterious(0.731)	NULL
AP1B1	162	genome.wustl.edu	37	22	29747772	29747772	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127.3	-1	reviewed	p.K327N	1.000	86	0%	76	51.3%	88	52.2%	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	HMMPfam_Adaptin_N,superfamily_ARM repeat
RFPL1-AS1	10740	genome.wustl.edu	37	22	29837313	29837313	+	RNA	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NR_002727.2	-1	validated	NULL	0.011	17	0%	13	61.5%	0	-	-	-	-	-
THOC5	8563	genome.wustl.edu	37	22	29932651	29932651	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002877.1	-1	validated	p.L226M	1.000	152	0%	113	34.5%	22	36.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_FimP
THOC5	8563	genome.wustl.edu	37	22	29945112	29945112	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002877.1	-1	validated	p.R9W	1.000	227	0.4%	173	42.8%	13	76.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ASCC2	84164	genome.wustl.edu	37	22	30221667	30221667	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032204.3	-1	provisional	p.V62I	1.000	52	0%	63	42.9%	23	34.7%	benign(0.005)	tolerated(0.69)	neutral(0.002)	NULL
TBC1D10A	83874	genome.wustl.edu	37	22	30690021	30690021	+	Missense_Mutation	SNP	G	G	A	rs5763933	byFrequency	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031937.1	-1	provisional	p.R262C	1.000	47	0%	38	39.5%	34	52.9%	possibly_damaging(0.847)	deleterious(0)	deleterious(0.770)	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
PES1	23481	genome.wustl.edu	37	22	30976628	30976628	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014303.2	-1	reviewed	p.K325Q	1.000	19	0%	25	44%	68	51.4%	unknown(0)	tolerated(0.13)	-	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain
PATZ1	23598	genome.wustl.edu	37	22	31740356	31740356	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014323.2	-1	reviewed	p.K411	1.000	24	0%	17	23.5%	42	16.6%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
EIF4ENIF1	56478	genome.wustl.edu	37	22	31838056	31838056	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019843.3	-1	reviewed	p.S752F	1.000	201	0%	129	45.7%	25	56%	benign(0)	tolerated(0.06)	neutral(0.323)	NULL
SFI1	9814	genome.wustl.edu	37	22	32002314	32002314	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007467.1	+1	validated	p.R685	0.128	72	0%	70	42.9%	16	37.5%	-	-	-	NULL
PRR14L	253143	genome.wustl.edu	37	22	32109445	32109445	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173566.2	-1	validated	p.Q1460H	0.000	200	0%	108	55.6%	12	41.6%	probably_damaging(0.995)	tolerated(0.16)	deleterious(0.517)	NULL
PRR14L	253143	genome.wustl.edu	37	22	32111236	32111236	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173566.2	-1	validated	p.T863	0.001	346	0%	164	45.7%	6	50%	-	-	-	NULL
DEPDC5	9681	genome.wustl.edu	37	22	32188768	32188768	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014662.2	+1	validated	p.Q244H	1.000	420	0%	168	42.3%	3	0%	benign(0.382)	tolerated(0.37)	neutral(0.141)	NULL
DEPDC5	9681	genome.wustl.edu	37	22	32302045	32302045	+	Missense_Mutation	SNP	C	C	T	rs146449468	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000382111	+1	known	p.T1484M	0.971	153	0%	98	42.9%	10	30%	probably_damaging(0.994)	tolerated(0.32)	deleterious(0.476)	NULL
YWHAH	7533	genome.wustl.edu	37	22	32352163	32352163	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003405.3	+1	reviewed	p.R42Q	1.000	138	0%	85	38.8%	88	29.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_14-3-3,HMMSmart_SM00101,PatternScan_1433_1,superfamily_14-3-3 protein
SLC5A1	6523	genome.wustl.edu	37	22	32480542	32480542	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000343.3	+1	reviewed	p.D261N	1.000	96	0%	51	27.5%	13	53.8%	possibly_damaging(0.735)	tolerated(0.08)	deleterious(0.569)	HMMPfam_SSF
BPIFC	254240	genome.wustl.edu	37	22	32831699	32831699	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174932.2	-1	validated	p.T306A	0.763	68	0%	40	32.5%	0	-	benign(0.066)	tolerated(0.43)	neutral(0.018)	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,superfamily_Bactericidal_perm-incr_a/b_dom
BPIFC	254240	genome.wustl.edu	37	22	32841845	32841845	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174932.2	-1	validated	p.S171	0.918	88	0%	40	42.5%	0	-	-	-	-	HMMPfam_LBP_BPI_CETP,HMMSmart_BPI1,superfamily_Bactericidal_perm-incr_a/b_dom
HMOX1	3162	genome.wustl.edu	37	22	35782827	35782827	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002133.1	+1	reviewed	p.G98	0.977	12	0%	18	27.8%	18	11.1%	-	-	-	HMMPfam_Heme_oxygenase,superfamily_Heme oxygenase-like
MCM5	4174	genome.wustl.edu	37	22	35813849	35813849	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006739.3	+1	reviewed	p.V568E	0.894	17	0%	20	45%	92	51%	benign(0)	tolerated(0.36)	neutral(0.020)	HMMPfam_MCM,HMMSmart_SM00350,superfamily_P-loop containing nucleoside triphosphate hydrolases
APOL6	80830	genome.wustl.edu	37	22	36055102	36055102	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030641.3	+1	reviewed	p.V164A	0.000	40	0%	45	17.8%	2	0%	benign(0.271)	tolerated(0.1)	neutral(0.316)	HMMPfam_ApoL
APOL5	80831	genome.wustl.edu	37	22	36116648	36116648	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030642.1	+1	reviewed	p.R30Q	0.000	97	0%	54	42.6%	0	-	unknown(0)	-	-	NULL
RBFOX2	23543	genome.wustl.edu	37	22	36141995	36141995	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001082578.1	-1	reviewed	p.A429V	1.000	65	0%	31	48.4%	26	34.6%	probably_damaging(0.979)	deleterious(0.02)	deleterious(0.805)	NULL
APOL4	80832	genome.wustl.edu	37	22	36587876	36587876	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000352371	-1	known	p.E101*	0.000	190	0%	83	28.9%	9	0%	-	-	-	HMMPfam_ApoL
MYH9	4627	genome.wustl.edu	37	22	36700105	36700105	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002473.4	-1	reviewed	p.D776Y	1.000	14	0%	10	80%	331	34.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
EIF3D	8664	genome.wustl.edu	37	22	36916626	36916626	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003753.3	-1	reviewed	p.D192G	1.000	165	0%	76	42.1%	205	49.7%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_eIF-3_zeta
CACNG2	10369	genome.wustl.edu	37	22	36960869	36960869	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006078.2	-1	reviewed	p.S167	1.000	40	0%	31	38.7%	0	-	-	-	-	HMMPfam_PMP22_Claudin
NCF4	4689	genome.wustl.edu	37	22	37260147	37260147	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013416.3	+1	validated	p.E31D	1.000	62	0%	25	56%	2	0%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_PX,HMMSmart_PX,superfamily_PX
CSF2RB	1439	genome.wustl.edu	37	22	37328935	37328935	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000395.2	+1	reviewed	p.A381T	0.002	39	0%	34	44.1%	1	0%	benign(0)	tolerated(0.6)	neutral(0.004)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
CSF2RB	1439	genome.wustl.edu	37	22	37334458	37334458	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000395.2	+1	reviewed	p.V870I	0.925	23	0%	25	32%	0	-	possibly_damaging(0.496)	deleterious(0.03)	deleterious(0.530)	NULL
KCTD17	79734	genome.wustl.edu	37	22	37455388	37455388	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000456470	+1	known	p.A136V	0.132	12	0%	11	63.6%	12	50%	-	-	-	NULL
IL2RB	3560	genome.wustl.edu	37	22	37528463	37528463	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000878.2	-1	reviewed	p.F288L	1.000	115	0%	90	36.7%	7	0%	possibly_damaging(0.942)	deleterious(0)	deleterious(0.832)	NULL
C1QTNF6	114904	genome.wustl.edu	37	22	37578284	37578284	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031910.3	-1	validated	p.D261N	0.998	15	0%	21	52.4%	12	33.3%	benign(0.005)	deleterious(0.04)	neutral(0.349)	HMMPfam_C1q,superfamily_TNF_like
C1QTNF6	114904	genome.wustl.edu	37	22	37581463	37581463	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031910.3	-1	validated	p.V28	0.397	6	0.000	10	0.500	3	33.3%	-	-	-	NULL
CYTH4	27128	genome.wustl.edu	37	22	37695291	37695291	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013385.3	+1	reviewed	p.L126	0.976	17	0%	19	21.1%	1	0%	-	-	-	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7
ELFN2	114794	genome.wustl.edu	37	22	37769254	37769254	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052906.3	-1	validated	p.R774Q	1.000	29	0%	36	50%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
ELFN2	114794	genome.wustl.edu	37	22	37770667	37770667	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052906.3	-1	validated	p.H303R	0.336	73	0%	59	13.6%	0	-	possibly_damaging(0.533)	deleterious(0)	deleterious(0.625)	HMMSmart_FN3
ELFN2	114794	genome.wustl.edu	37	22	37771328	37771328	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052906.3	-1	validated	p.D83N	1.000	75	0%	83	38.6%	0	-	probably_damaging(0.985)	tolerated(0.34)	neutral(0.455)	superfamily_SSF52058
CARD10	29775	genome.wustl.edu	37	22	37893139	37893139	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014550.3	-1	reviewed	p.E612*	0.416	35	0%	29	34.5%	3	33.3%	-	-	-	NULL
TRIOBP	11078	genome.wustl.edu	37	22	38134686	38134686	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039141.2	+1	reviewed	p.R1715I	1.000	78	0%	53	35.8%	2	100%	possibly_damaging(0.924)	deleterious(0)	deleterious(0.818)	NULL
SOX10	6663	genome.wustl.edu	37	22	38369605	38369605	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006941.3	-1	reviewed	p.R433Q	1.000	15	0%	23	21.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SOX10	6663	genome.wustl.edu	37	22	38373929	38373929	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000446929	-1	known	p.T91I	1.000	8	0.000	14	0.500	0	-	-	-	-	NULL
PICK1	9463	genome.wustl.edu	37	22	38470897	38470897	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039583.1	+1	reviewed	p.R336C	1.000	13	0%	13	38.5%	68	50%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_Arfaptin
PLA2G6	8398	genome.wustl.edu	37	22	38524421	38524421	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000452794	-1	known	p.R58Q	0.960	52	0%	70	37.1%	10	20%	-	-	-	superfamily_Ankyrin repeat
KCNJ4	3761	genome.wustl.edu	37	22	38822881	38822881	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004981.1	-1	reviewed	p.F419	0.836	11	0.000	8	0.625	0	-	-	-	-	NULL
GTPBP1	9567	genome.wustl.edu	37	22	39117814	39117814	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004286.4	+1	reviewed	p.V301A	1.000	68	0%	49	46.9%	50	46%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_GTP_EFTU,superfamily_SSF52540
SUN2	25777	genome.wustl.edu	37	22	39132304	39132304	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015374.1	-1	validated	p.R708C	1.000	20	0%	30	46.7%	55	43.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sad1_UNC
SUN2	25777	genome.wustl.edu	37	22	39134986	39134986	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015374.1	-1	validated	p.S557	0.953	35	0%	35	14.3%	100	9%	-	-	-	NULL
CBX6	23466	genome.wustl.edu	37	22	39262766	39262766	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014292.3	-1	validated	p.F229	0.536	7	0.000	6	0.667	4	0%	-	-	-	NULL
APOBEC3F	200316	genome.wustl.edu	37	22	39438998	39438998	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006666.1	+1	reviewed	p.P25L	0.000	255	0%	183	41.5%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_APOBEC_N
TAB1	10454	genome.wustl.edu	37	22	39817886	39817886	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006116.2	+1	reviewed	p.P277	0.500	56	0%	54	22.2%	19	15.7%	-	-	-	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C
ATF4	468	genome.wustl.edu	37	22	39918463	39918463	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001675.2	+1	reviewed	p.E304D	0.026	161	0%	104	37.5%	519	48.9%	possibly_damaging(0.618)	tolerated(0.32)	neutral(0.239)	HMMSmart_SM00338,HMMPfam_bZIP_1
ENTHD1	150350	genome.wustl.edu	37	22	40283462	40283462	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152512.3	-1	provisional	p.F97L	1.000	275	0%	160	44.4%	0	-	benign(0.141)	tolerated(0.31)	neutral(0.039)	HMMPfam_ENTH,superfamily_ENTH/VHS domain,HMMSmart_SM00273
TNRC6B	23112	genome.wustl.edu	37	22	40658039	40658039	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015088.2	+1	validated	p.R107C	1.000	4	0.000	12	0.333	3	33.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
TNRC6B	23112	genome.wustl.edu	37	22	40697211	40697211	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015088.2	+1	validated	p.G1222C	0.526	26	0%	41	41.5%	9	44.4%	benign(0.11)	tolerated(0.1)	neutral(0.295)	NULL
TNRC6B	23112	genome.wustl.edu	37	22	40704594	40704594	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015088.2	+1	validated	p.T1290I	1.000	115	0%	107	44.9%	5	60%	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	NULL
XPNPEP3	63929	genome.wustl.edu	37	22	41322439	41322439	+	Nonstop_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022098.2	+1	validated	p.*508W	1.000	82	0%	37	43.2%	3	66.6%	-	-	-	NULL
EP300	2033	genome.wustl.edu	37	22	41536179	41536179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001429.3	+1	reviewed	p.A599D	1.000	202	0%	131	31.3%	12	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_KIX,superfamily_KIX
EP300	2033	genome.wustl.edu	37	22	41546174	41546174	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001429.3	+1	reviewed	p.P930L	0.614	28	0%	32	53.1%	32	62.5%	unknown(0)	tolerated(0.08)	-	NULL
EP300	2033	genome.wustl.edu	37	22	41553213	41553213	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001429.3	+1	reviewed	p.T1101I	1.000	197	0%	118	46.6%	12	58.3%	unknown(0)	deleterious(0)	-	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1
EP300	2033	genome.wustl.edu	37	22	41562638	41562638	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001429.3	+1	reviewed	p.R1281Q	1.000	437	0%	194	43.8%	10	30%	unknown(0)	tolerated(0.67)	-	HMMPfam_DUF906
EP300	2033	genome.wustl.edu	37	22	41572357	41572357	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001429.3	+1	reviewed	p.A1629V	1.000	25	0%	21	47.6%	59	50.8%	unknown(0)	deleterious(0)	-	NULL
L3MBTL2	83746	genome.wustl.edu	37	22	41621938	41621938	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031488.4	+1	validated	p.P499	0.001	27	0%	31	48.4%	18	77.7%	-	-	-	HMMPfam_MBT,HMMSmart_SM00561,superfamily_Tudor/PWWP/MBT
ZC3H7B	23264	genome.wustl.edu	37	22	41734240	41734240	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000396532	+1	known	p.T112M	0.000	16	0%	19	26.3%	0	-	-	-	-	NULL
TOB2	10766	genome.wustl.edu	37	22	41832514	41832514	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016272.3	-1	validated	p.G279V	0.018	22	0%	22	50%	43	34.8%	benign(0.084)	tolerated(0.48)	neutral(0.017)	NULL
TOB2	10766	genome.wustl.edu	37	22	41832829	41832829	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016272.3	-1	validated	p.I174T	1.000	28	0%	30	50%	43	69.7%	possibly_damaging(0.575)	deleterious(0)	deleterious(0.641)	NULL
MEI1	150365	genome.wustl.edu	37	22	42191740	42191740	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152513.3	+1	validated	p.L1223H	0.997	28	0%	37	43.2%	1	0%	possibly_damaging(0.753)	deleterious(0.01)	deleterious(0.682)	NULL
CCDC134	79879	genome.wustl.edu	37	22	42209814	42209814	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024821.2	+1	validated	p.I184	0.319	43	0%	33	33.3%	3	66.6%	-	-	-	NULL
SREBF2	6721	genome.wustl.edu	37	22	42263058	42263058	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004599.2	+1	reviewed	p.A104	0.000	56	0%	69	43.5%	74	44.5%	-	-	-	NULL
SREBF2	6721	genome.wustl.edu	37	22	42264700	42264700	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004599.2	+1	reviewed	p.A208	1.000	65	0%	35	60%	65	52.3%	-	-	-	NULL
SREBF2	6721	genome.wustl.edu	37	22	42271431	42271431	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004599.2	+1	reviewed	p.L394	1.000	67	0%	41	24.4%	42	4.7%	-	-	-	superfamily_HLH_basic
WBP2NL	164684	genome.wustl.edu	37	22	42423111	42423111	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152613.2	+1	validated	p.E286K	0.000	46	0%	40	52.5%	0	-	benign(0.224)	tolerated(0.18)	neutral(0.078)	NULL
TCF20	6942	genome.wustl.edu	37	22	42565883	42565883	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005650.1	-1	reviewed	p.E1923D	1.000	90	0%	52	32.7%	43	39.5%	benign(0.108)	tolerated(0.25)	neutral(0.045)	HMMSmart_SM00249
TCF20	6942	genome.wustl.edu	37	22	42606208	42606208	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005650.1	-1	reviewed	p.H1702Y	1.000	37	0%	41	14.6%	25	4%	probably_damaging(0.955)	deleterious(0)	deleterious(0.843)	NULL
TCF20	6942	genome.wustl.edu	37	22	42610617	42610617	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005650.1	-1	reviewed	p.G232D	1.000	45	0%	34	52.9%	10	40%	possibly_damaging(0.638)	tolerated(0.1)	deleterious(0.510)	NULL
RRP7A	27341	genome.wustl.edu	37	22	42914089	42914089	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015703.4	-1	validated	p.G46	0.099	97	0%	56	33.9%	22	4.5%	-	-	-	superfamily_SSF54928
ARFGAP3	26286	genome.wustl.edu	37	22	43231439	43231439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014570.4	-1	reviewed	p.R108C	0.997	196	0.5%	102	15.7%	110	20%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ArfGAP
PACSIN2	11252	genome.wustl.edu	37	22	43289513	43289513	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007229.3	-1	reviewed	p.A56V	0.998	16	0%	15	33.3%	52	55.7%	possibly_damaging(0.931)	deleterious(0)	deleterious(0.822)	HMMPfam_FCH,HMMSmart_SM00055
SCUBE1	80274	genome.wustl.edu	37	22	43658775	43658775	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000449304	-1	known	p.R11*	0.996	55	0%	54	50%	0	-	-	-	-	PatternScan_EGF_2,superfamily_EGF/Laminin
EFCAB6	64800	genome.wustl.edu	37	22	44074010	44074010	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022785.2	-1	validated	p.R429*	0.019	271	0%	104	39.4%	0	-	-	-	-	superfamily_EF-hand
EFCAB6	64800	genome.wustl.edu	37	22	44151672	44151672	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022785.2	-1	validated	p.E161*	0.937	371	0%	169	44.4%	1	0%	-	-	-	superfamily_EF-hand
EFCAB6	64800	genome.wustl.edu	37	22	44178124	44178124	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022785.2	-1	validated	p.P25	0.173	418	0.2%	196	48%	0	-	-	-	-	NULL
PNPLA5	150379	genome.wustl.edu	37	22	44280118	44280118	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138814.3	-1	reviewed	p.E353K	0.389	9	0.111	8	0.625	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
PNPLA5	150379	genome.wustl.edu	37	22	44285209	44285209	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138814.3	-1	reviewed	p.E234D	1.000	29	0%	25	44%	0	-	possibly_damaging(0.655)	tolerated(0.24)	neutral(0.268)	NULL
PNPLA3	80339	genome.wustl.edu	37	22	44328871	44328871	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025225.2	+1	reviewed	p.T200	0.103	126	0%	77	37.7%	3	66.6%	-	-	-	NULL
PARVB	29780	genome.wustl.edu	37	22	44395478	44395478	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003828.1	+1	validated	p.A46T	0.000	68	0%	57	40.4%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
LDOC1L	84247	genome.wustl.edu	37	22	44892881	44892881	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032287.2	-1	validated	p.R186C	0.977	14	0%	13	53.8%	14	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
LDOC1L	84247	genome.wustl.edu	37	22	44892950	44892950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032287.2	-1	validated	p.R163C	0.999	30	0%	25	28%	15	26.6%	probably_damaging(0.999)	tolerated(0.22)	deleterious(0.532)	NULL
NUP50	10762	genome.wustl.edu	37	22	45574597	45574597	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007172.3	+1	reviewed	p.F273	0.721	226	0.4%	128	35.9%	13	23%	-	-	-	HMMPfam_NUP50
UPK3A	7380	genome.wustl.edu	37	22	45691509	45691509	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006953.3	+1	reviewed	p.S258L	0.997	28	0%	20	50%	0	-	possibly_damaging(0.915)	deleterious(0.02)	deleterious(0.750)	NULL
FBLN1	2192	genome.wustl.edu	37	22	45939326	45939326	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006486.2	+1	reviewed	p.K414R	1.000	28	0%	23	26.1%	716	26.6%	probably_damaging(0.999)	tolerated(0.24)	deleterious(0.528)	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
CELSR1	9620	genome.wustl.edu	37	22	46787163	46787163	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014246.1	-1	reviewed	p.K2057T	0.997	20	0%	21	38.1%	15	33.3%	probably_damaging(0.986)	deleterious(0.01)	deleterious(0.840)	HMMPfam_HRM,HMMSmart_SM00008,superfamily_Concanavalin A-like lectins/glucanases
CELSR1	9620	genome.wustl.edu	37	22	46860070	46860070	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014246.1	-1	reviewed	p.K1239N	0.920	11	0%	13	76.9%	14	50%	possibly_damaging(0.912)	tolerated(0.2)	neutral(0.412)	NULL
CELSR1	9620	genome.wustl.edu	37	22	46930827	46930827	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000454637	-1	known	p.R122H	0.237	14	0.000	8	0.500	16	31.2%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
GRAMD4	23151	genome.wustl.edu	37	22	47069703	47069703	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015124.2	+1	validated	p.P459L	0.988	12	0%	21	47.6%	18	33.3%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_GRAM,HMMSmart_SM00568
CERK	64781	genome.wustl.edu	37	22	47086068	47086068	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022766.5	-1	validated	p.R454	0.222	54	0%	39	43.6%	36	41.6%	-	-	-	NULL
ZBED4	9889	genome.wustl.edu	37	22	50277355	50277355	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014838.2	+1	validated	p.F15	0.003	57	0%	30	40%	3	33.3%	-	-	-	NULL
ZBED4	9889	genome.wustl.edu	37	22	50278882	50278882	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014838.2	+1	validated	p.P524	0.012	52	0%	33	51.5%	3	33.3%	-	-	-	NULL
TTLL8	164714	genome.wustl.edu	37	22	50470329	50470329	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080447.1	-1	provisional	p.V498A	1.000	17	0%	25	68%	0	-	possibly_damaging(0.61)	deleterious(0.01)	deleterious(0.617)	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like
MLC1	23209	genome.wustl.edu	37	22	50523199	50523199	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015166.3	-1	reviewed	p.P45S	0.267	19	0%	20	40%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
MOV10L1	54456	genome.wustl.edu	37	22	50537959	50537959	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018995.2	+1	reviewed	p.V124M	0.996	110	0%	62	38.7%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
MOV10L1	54456	genome.wustl.edu	37	22	50559041	50559041	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018995.2	+1	reviewed	p.A522V	1.000	215	0%	116	32.8%	0	-	probably_damaging(0.991)	tolerated(0.09)	deleterious(0.740)	NULL
MOV10L1	54456	genome.wustl.edu	37	22	50573014	50573014	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018995.2	+1	reviewed	p.N675	0.003	307	0%	145	43.4%	0	-	-	-	-	NULL
MOV10L1	54456	genome.wustl.edu	37	22	50589275	50589275	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018995.2	+1	reviewed	p.Y947H	0.987	44	0%	39	30.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MOV10L1	54456	genome.wustl.edu	37	22	50598172	50598172	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018995.2	+1	reviewed	p.E1094D	1.000	273	0%	166	44%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
TRABD	80305	genome.wustl.edu	37	22	50636554	50636554	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_025204.2	+1	provisional	p.G299S	1.000	9	0.000	17	0.647	119	42%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TraB
TUBGCP6	85378	genome.wustl.edu	37	22	50662832	50662832	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020461.3	-1	reviewed	p.R695W	0.004	66	0%	67	38.8%	18	55.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Spc97_Spc98
TUBGCP6	85378	genome.wustl.edu	37	22	50664523	50664523	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020461.3	-1	reviewed	p.V597I	0.818	80	0%	72	47.2%	10	80%	benign(0.025)	tolerated(0.38)	neutral(0.019)	HMMPfam_Spc97_Spc98
HDAC10	83933	genome.wustl.edu	37	22	50685154	50685154	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032019.5	-1	validated	p.V509M	0.370	13	0%	10	60%	49	38.7%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_Arginase/deacetylase
PLXNB2	23654	genome.wustl.edu	37	22	50721607	50721607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012401.2	-1	validated	p.K896N	0.115	3	0.000	10	0.800	128	45.3%	benign(0.002)	tolerated(0.2)	neutral(0.049)	HMMPfam_TIG,HMMSmart_IPT,superfamily_Ig_E-set
SBF1	6305	genome.wustl.edu	37	22	50893473	50893473	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000418590	-1	known	p.R85*	0.986	21	0%	30	26.7%	78	15.3%	-	-	-	superfamily_(Phosphotyrosine protein) phosphatases II
SBF1	6305	genome.wustl.edu	37	22	50894666	50894666	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002972.2	-1	validated	p.E1389D	1.000	11	0.000	9	0.444	50	42%	probably_damaging(0.994)	tolerated(0.1)	deleterious(0.738)	superfamily_(Phosphotyrosine protein) phosphatases II
SBF1	6305	genome.wustl.edu	37	22	50899650	50899650	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002972.2	-1	validated	p.V969I	0.981	19	0%	14	35.7%	27	44.4%	benign(0.051)	tolerated(0.25)	neutral(0.040)	superfamily_PH domain-like
CPT1B	1375	genome.wustl.edu	37	22	51008731	51008731	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145135.1	-1	reviewed	p.G711	1.000	25	0%	15	53.3%	57	59.6%	-	-	-	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases
CHKB	1120	genome.wustl.edu	37	22	51018634	51018634	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005198.4	-1	reviewed	p.S268I	1.000	81	0%	67	53.7%	34	41.1%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	HMMPfam_Choline_kinase,superfamily_Protein kinase-like (PK-like)
PLCXD1	55344	genome.wustl.edu	37	X	205491	205491	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018390.3	+1	reviewed	p.L73	0.015	59	0%	42	16.7%	13	7.6%	-	-	-	superfamily_PLC-like_Pdiesterase_TIM-brl
SHOX	6473	genome.wustl.edu	37	X	595553	595553	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000451.3	+1	reviewed	p.R160C	1.000	6	0.000	19	0.474	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1
CSF2RA	1438	genome.wustl.edu	37	X	1428415	1428415	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_172246.2	+1	reviewed	p.A356V	0.000	172	0%	130	53.1%	1	0%	unknown(0)	-	-	NULL
IL3RA	3563	genome.wustl.edu	37	X	1464268	1464268	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002183.2	+1	reviewed	p.D42N	0.066	568	0%	326	44.5%	3	33.3%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
SLC25A6	293	genome.wustl.edu	37	X	1508152	1508152	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001636.3	-1	reviewed	p.V194M	0.998	18	0%	25	52%	1492	42.9%	benign(0.044)	tolerated(0.34)	neutral(0.025)	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
ASMTL	8623	genome.wustl.edu	37	X	1537902	1537902	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004192.3	-1	reviewed	p.R451C	0.000	8	0.000	11	0.727	94	53.1%	probably_damaging(0.997)	tolerated(0.11)	deleterious(0.738)	HMMPfam_Methyltransf_2,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
ASMTL	8623	genome.wustl.edu	37	X	1540710	1540710	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004192.3	-1	reviewed	p.N362	0.014	204	0%	187	43.3%	60	38.3%	-	-	-	"HMMPfam_Methyltransf_2,superfamily_""Winged helix"" DNA-binding domain"
LOC100288477	100288477	genome.wustl.edu	37	X	2161372	2161372	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343802.1	+1	model	p.T103M	0.996	26	0%	25	56%	0	-	-	-	-	NULL
ZBED1	9189	genome.wustl.edu	37	X	2407051	2407051	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004729.3	-1	reviewed	p.E570D	1.000	16	0%	36	30.6%	27	51.8%	benign(0.127)	tolerated(0.09)	neutral(0.307)	NULL
XG	7499	genome.wustl.edu	37	X	2726250	2726250	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001141919.1	+1	reviewed	p.G148D	0.167	112	0%	66	33.3%	2	50%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
GYG2	8908	genome.wustl.edu	37	X	2773080	2773080	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003918.2	+1	reviewed	p.A155V	1.000	77	0%	46	13%	13	7.6%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases
ARSD	414	genome.wustl.edu	37	X	2828815	2828815	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001669.2	-1	reviewed	p.I340	0.136	346	0%	211	38.4%	11	9%	-	-	-	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like
ARSD	414	genome.wustl.edu	37	X	2836183	2836183	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001669.2	-1	reviewed	p.G175	1.000	6	0.000	7	0.571	19	57.8%	-	-	-	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like
ARSD	414	genome.wustl.edu	37	X	2843798	2843798	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001669.2	-1	reviewed	p.L18S	0.000	164	0%	103	51.5%	14	57.1%	unknown(0)	tolerated(0.12)	-	NULL
ARSE	415	genome.wustl.edu	37	X	2876407	2876407	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000047.2	-1	reviewed	p.S31	0.000	56	0%	56	42.9%	1	0%	-	-	-	NULL
MXRA5	25878	genome.wustl.edu	37	X	3228183	3228183	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015419.3	-1	reviewed	p.R2687	0.224	17	0%	16	50%	33	42.4%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
MXRA5	25878	genome.wustl.edu	37	X	3228262	3228262	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015419.3	-1	reviewed	p.P2661H	0.000	33	0%	29	41.4%	49	51%	probably_damaging(0.954)	tolerated(0.14)	deleterious(0.647)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
MXRA5	25878	genome.wustl.edu	37	X	3235934	3235934	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015419.3	-1	reviewed	p.A1930T	0.997	23	0%	32	50%	36	30.5%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MXRA5	25878	genome.wustl.edu	37	X	3238984	3238984	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015419.3	-1	reviewed	p.F1581C	0.000	355	0%	246	45.5%	20	45%	probably_damaging(0.955)	deleterious(0)	deleterious(0.843)	NULL
NLGN4X	57502	genome.wustl.edu	37	X	5821171	5821171	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020742.2	-1	reviewed	p.D516	0.999	50	0%	49	28.6%	0	-	-	-	-	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases
LOC100288699	100288699	genome.wustl.edu	37	X	6451769	6451769	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343805.1	+1	model	NULL	0.012	341	0%	269	29%	0	-	unknown(0)	deleterious(0)	-	-
PNPLA4	8228	genome.wustl.edu	37	X	7894049	7894049	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142389.1	-1	reviewed	p.A38T	0.995	96	0%	62	46.8%	9	0%	possibly_damaging(0.871)	tolerated(0.62)	neutral(0.343)	HMMPfam_Patatin,superfamily_FabD/lysophospholipase-like
KAL1	3730	genome.wustl.edu	37	X	8565162	8565162	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000216.2	-1	reviewed	p.E152K	0.759	86	0%	51	43.1%	7	0%	possibly_damaging(0.901)	tolerated(0.23)	neutral(0.398)	HMMPfam_WAP,HMMSmart_WAP,superfamily_WAP,PatternScan_4_DISULFIDE_CORE
FAM9A	171482	genome.wustl.edu	37	X	8763152	8763152	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174951.3	-1	validated	p.E266D	0.014	230	0%	128	47.7%	0	-	unknown(0)	-	-	NULL
FAM9A	171482	genome.wustl.edu	37	X	8764350	8764350	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174951.3	-1	validated	p.K149N	0.001	1052	0%	542	41%	0	-	possibly_damaging(0.952)	tolerated(0.1)	deleterious(0.682)	NULL
FAM9A	171482	genome.wustl.edu	37	X	8766189	8766189	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_174951.3	-1	validated	e4+2	0.026	370	0%	180	12.2%	0	-	-	-	-	-
TBL1X	6907	genome.wustl.edu	37	X	9656230	9656230	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139466.1	+1	reviewed	p.T177	0.000	17	0%	29	48.3%	2	0%	-	-	-	NULL
TBL1X	6907	genome.wustl.edu	37	X	9656242	9656242	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001139466.1	+1	reviewed	p.G181	0.000	18	0%	31	32.3%	2	100%	-	-	-	NULL
GPR143	4935	genome.wustl.edu	37	X	9727407	9727407	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000447366	-1	known	p.C76R	0.983	58	0%	37	37.8%	7	0%	-	-	-	HMMPfam_Ocular_alb
SHROOM2	357	genome.wustl.edu	37	X	9900382	9900382	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001649.2	+1	reviewed	p.R1020K	0.840	22	0%	25	56%	2	0%	possibly_damaging(0.945)	tolerated(1)	neutral(0.390)	NULL
SHROOM2	357	genome.wustl.edu	37	X	9905646	9905646	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001649.2	+1	reviewed	p.D1354N	0.997	35	0%	32	34.4%	5	0%	benign(0.418)	tolerated(0.11)	neutral(0.407)	HMMPfam_ASD2
WWC3	55841	genome.wustl.edu	37	X	10035455	10035455	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015691.3	+1	validated	p.R49W	1.000	76	0%	52	25%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
WWC3	55841	genome.wustl.edu	37	X	10035516	10035516	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015691.3	+1	validated	p.R69H	1.000	43	0%	45	31.1%	7	0%	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	NULL
CLCN4	1183	genome.wustl.edu	37	X	10163103	10163103	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001830.3	+1	reviewed	p.Q133*	1.000	76	0%	47	42.6%	4	0%	-	-	-	superfamily_Clc chloride channel
CLCN4	1183	genome.wustl.edu	37	X	10181838	10181838	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001830.3	+1	reviewed	p.A565V	1.000	40	0%	44	54.5%	3	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Voltage_CLC,superfamily_Clc chloride channel
MID1	4281	genome.wustl.edu	37	X	10491158	10491158	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000381.2	-1	reviewed	p.L244F	1.000	582	0%	285	44.2%	7	71.4%	possibly_damaging(0.84)	deleterious(0.03)	deleterious(0.686)	HMMSmart_SM00502
ARHGAP6	395	genome.wustl.edu	37	X	11174725	11174725	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013427.2	-1	reviewed	p.E611K	1.000	128	0%	65	46.2%	0	-	probably_damaging(0.999)	tolerated(0.19)	deleterious(0.540)	NULL
ARHGAP6	395	genome.wustl.edu	37	X	11682723	11682723	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013427.2	-1	reviewed	p.G76S	0.001	5	0.000	14	0.429	1	100%	benign(0.018)	deleterious(0)	neutral(0.445)	NULL
FRMPD4	9758	genome.wustl.edu	37	X	12734771	12734771	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014728.3	+1	reviewed	p.I731	0.472	30	0%	31	48.4%	0	-	-	-	-	NULL
TLR7	51284	genome.wustl.edu	37	X	12904321	12904321	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016562.3	+1	reviewed	p.L232I	1.000	178	0%	49	14.3%	0	-	probably_damaging(0.998)	tolerated(0.08)	deleterious(0.774)	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
TLR7	51284	genome.wustl.edu	37	X	12906390	12906390	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016562.3	+1	reviewed	p.E921D	0.974	110	0.9%	70	45.7%	0	-	benign(0.023)	tolerated(0.78)	neutral(0.002)	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
TLR8	51311	genome.wustl.edu	37	X	12939225	12939225	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138636.4	+1	reviewed	p.R689H	0.000	85	0%	39	15.4%	0	-	benign(0.001)	tolerated(0.59)	neutral(0.004)	superfamily_SSF52058
FAM9C	171484	genome.wustl.edu	37	X	13056587	13056587	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000438997	-1	known	p.K118R	0.014	476	0%	271	11.1%	0	-	-	-	-	NULL
FAM9C	171484	genome.wustl.edu	37	X	13057981	13057981	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000438997	-1	known	p.S88*	0.000	882	0%	540	47.2%	0	-	benign(0.053)	tolerated(0.08)	neutral(0.303)	NULL
ATXN3L	92552	genome.wustl.edu	37	X	13337650	13337650	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001135995.1	-1	validated	p.S135F	1.000	150	0%	60	38.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Josephin
FANCB	2187	genome.wustl.edu	37	X	14863362	14863362	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001018113.1	-1	reviewed	p.D515N	0.000	121	0%	46	56.5%	4	0%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
ASB9	140462	genome.wustl.edu	37	X	15266968	15266968	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031739.2	-1	reviewed	p.D220N	1.000	72	0%	48	56.2%	1	100%	possibly_damaging(0.829)	tolerated(0.11)	deleterious(0.586)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
PIR	8544	genome.wustl.edu	37	X	15509288	15509288	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001018109.1	-1	reviewed	p.P31	0.012	113	0.9%	79	48.1%	18	0%	-	-	-	HMMPfam_Pirin,superfamily_RmlC_like_cupin
BMX	660	genome.wustl.edu	37	X	15543427	15543427	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001721.6	+1	reviewed	p.D257Y	0.101	200	0.5%	59	42.4%	3	100%	benign(0.002)	tolerated(0.3)	neutral(0.029)	NULL
BMX	660	genome.wustl.edu	37	X	15543483	15543483	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001721.6	+1	reviewed	p.I275M	0.997	184	0%	52	46.2%	3	0%	benign(0)	tolerated(0.23)	neutral(0.042)	NULL
ACE2	59272	genome.wustl.edu	37	X	15589779	15589779	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021804.2	-1	reviewed	p.S602Y	0.133	286	0%	107	36.4%	0	-	benign(0.011)	deleterious(0.02)	neutral(0.384)	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain"
ACE2	59272	genome.wustl.edu	37	X	15609913	15609913	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021804.2	-1	reviewed	p.R169I	1.000	189	0%	94	42.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain"
ACE2	59272	genome.wustl.edu	37	X	15610408	15610408	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021804.2	-1	reviewed	p.S128I	1.000	616	0%	224	40.2%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain"
CA5B	11238	genome.wustl.edu	37	X	15782791	15782791	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007220.3	+1	reviewed	p.P78L	0.993	109	0%	51	33.3%	9	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase
ZRSR2	8233	genome.wustl.edu	37	X	15822290	15822290	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005089.3	+1	reviewed	p.E123D	1.000	438	0%	200	41.5%	22	50%	unknown(0)	tolerated(0.08)	-	NULL
CTPS2	56474	genome.wustl.edu	37	X	16701278	16701278	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144002.1	-1	reviewed	p.A315V	0.340	152	0%	82	19.5%	4	0%	benign(0.028)	deleterious(0.03)	neutral(0.366)	HMMPfam_GATase,superfamily_Class I glutamine amidotransferase-like
CTPS2	56474	genome.wustl.edu	37	X	16709723	16709723	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144002.1	-1	reviewed	p.T220	0.007	138	0%	90	48.9%	6	0%	-	-	-	HMMPfam_CTP_synth_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
CTPS2	56474	genome.wustl.edu	37	X	16711539	16711539	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144002.1	-1	reviewed	p.A170	0.586	183	0%	100	45%	3	0%	-	-	-	HMMPfam_CTP_synth_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
SYAP1	94056	genome.wustl.edu	37	X	16759853	16759853	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032796.3	+1	validated	p.P126S	1.000	266	0%	109	40.4%	95	43.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TXLNG	55787	genome.wustl.edu	37	X	16836796	16836796	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018360.2	+1	reviewed	p.G68C	0.891	297	0%	171	39.8%	14	50%	possibly_damaging(0.708)	deleterious(0.01)	deleterious(0.661)	NULL
REPS2	9185	genome.wustl.edu	37	X	17080607	17080607	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004726.2	+1	reviewed	p.S387	0.984	466	0%	223	40.4%	13	0%	-	-	-	NULL
REPS2	9185	genome.wustl.edu	37	X	17092258	17092258	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004726.2	+1	reviewed	p.S452I	1.000	306	0%	180	15%	4	0%	possibly_damaging(0.69)	tolerated(0.34)	neutral(0.270)	NULL
REPS2	9185	genome.wustl.edu	37	X	17157040	17157040	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004726.2	+1	reviewed	p.A624T	1.000	174	0%	105	42.9%	16	93.7%	possibly_damaging(0.643)	tolerated(0.84)	neutral(0.226)	NULL
NHS	4810	genome.wustl.edu	37	X	17745588	17745588	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198270.2	+1	reviewed	p.E1100G	0.956	275	0%	204	21.1%	3	100%	benign(0.02)	tolerated(0.27)	neutral(0.035)	NULL
SCML1	6322	genome.wustl.edu	37	X	17764148	17764148	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037540.1	+1	validated	p.I43T	0.000	230	0%	98	16.3%	2	50%	benign(0)	tolerated(0.23)	neutral(0.042)	NULL
BEND2	139105	genome.wustl.edu	37	X	18183237	18183237	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153346.4	-1	validated	p.D764	0.000	75	0%	28	50%	0	-	-	-	-	HMMPfam_BEN
BEND2	139105	genome.wustl.edu	37	X	18192195	18192195	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153346.4	-1	validated	p.R646*	0.000	261	0.4%	100	36%	0	-	-	-	-	NULL
BEND2	139105	genome.wustl.edu	37	X	18198649	18198649	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153346.4	-1	validated	p.V470	0.000	299	0%	135	37%	0	-	-	-	-	NULL
CDKL5	6792	genome.wustl.edu	37	X	18525251	18525251	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037343.1	+1	reviewed	p.K12T	1.000	770	0%	395	41%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	superfamily_Kinase_like
PPEF1	5475	genome.wustl.edu	37	X	18842042	18842042	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006240.2	+1	reviewed	p.G501	0.599	227	0%	128	37.5%	0	-	-	-	-	HMMSmart_SM00054,superfamily_Metallo-dependent phosphatases
ENSG00000250774	0	genome.wustl.edu	37	X	18917277	18917277	+	RNA	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000502927	+1	known	NULL	0.000	101	0%	90	54.4%	5	0%	-	-	-	-
ENSG00000250774	0	genome.wustl.edu	37	X	18917427	18917427	+	RNA	SNP	G	G	A	rs185271262	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000502927	+1	known	NULL	0.000	130	0%	97	34%	0	-	-	-	-	-
ENSG00000250774	0	genome.wustl.edu	37	X	18918640	18918640	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000502927	+1	known	NULL	0.000	38	0%	36	47.2%	1	0%	-	-	-	-
PHKA2	5256	genome.wustl.edu	37	X	18938222	18938222	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000292.2	-1	reviewed	p.A631T	0.001	223	0%	113	47.8%	9	100%	benign(0)	tolerated(0.7)	neutral(0.002)	HMMPfam_PHK_AB
MAP3K15	389840	genome.wustl.edu	37	X	19379664	19379665	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001671.3	-1	validated	p.E717fs	0.933:0.097	-	-	-	-	-	-	-	-	-	superfamily_SAM_homology
MAP3K15	389840	genome.wustl.edu	37	X	19398268	19398268	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001671.3	-1	validated	p.E328D	1.000	71	0%	59	40.7%	0	-	probably_damaging(0.978)	deleterious(0.02)	deleterious(0.803)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MAP3K15	389840	genome.wustl.edu	37	X	19410584	19410584	+	Silent	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001671.3	-1	validated	p.L209	0.990	169	0%	116	44%	0	-	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MAP3K15	389840	genome.wustl.edu	37	X	19443762	19443762	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000338883	-1	known	p.K442N	1.000	226	0%	94	44.7%	0	-	probably_damaging(1)	tolerated(0.23)	deleterious(0.541)	NULL
MAP3K15	389840	genome.wustl.edu	37	X	19444457	19444457	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000338883	-1	known	p.R391C	1.000	213	0%	86	41.9%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CXorf23	256643	genome.wustl.edu	37	X	19968952	19968952	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198279.3	-1	validated	p.R555Q	1.000	495	0.2%	235	40.9%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CXorf23	256643	genome.wustl.edu	37	X	19983324	19983324	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198279.3	-1	validated	p.E371V	0.204	354	0.3%	140	38.6%	0	-	benign(0.255)	deleterious(0.01)	neutral(0.432)	NULL
MAP7D2	256714	genome.wustl.edu	37	X	20043149	20043149	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152780.3	-1	validated	p.I403	1.000	205	0%	117	49.6%	0	-	-	-	-	HMMPfam_MAP7
EIF1AX	1964	genome.wustl.edu	37	X	20150319	20150319	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001412.3	-1	reviewed	p.Y106	0.999	176	0%	98	34.7%	151	38.4%	-	-	-	HMMSmart_SM00652,superfamily_Nucleic acid-binding proteins
RPS6KA3	6197	genome.wustl.edu	37	X	20187558	20187558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004586.2	-1	reviewed	p.R469C	1.000	517	0%	181	51.4%	9	88.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
SMPX	23676	genome.wustl.edu	37	X	21755699	21755699	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014332.1	-1	provisional	p.V83	1.000	647	0.2%	206	44.7%	0	-	-	-	-	NULL
PHEX	5251	genome.wustl.edu	37	X	22239763	22239763	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000444.4	+1	reviewed	p.P601H	1.000	360	0%	140	42.1%	0	-	possibly_damaging(0.835)	tolerated(0.1)	deleterious(0.605)	HMMPfam_Peptidase_M13,superfamily_SSF55486
PHEX	5251	genome.wustl.edu	37	X	22244607	22244607	+	Silent	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000444.4	+1	reviewed	p.G649	0.951	334	0%	163	44.2%	1	0%	-	-	-	HMMPfam_Peptidase_M13,superfamily_SSF55486
DDX53	168400	genome.wustl.edu	37	X	23019821	23019821	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182699.2	+1	validated	p.D549	1.000	209	0%	95	44.2%	0	-	-	-	-	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540
ENSG00000249566	0	genome.wustl.edu	37	X	23093821	23093821	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000508288	-1	novel	NULL	0.039	44	0%	35	28.6%	15	0%	-	-	-	-
PTCHD1	139411	genome.wustl.edu	37	X	23397874	23397874	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173495.2	+1	validated	p.I173T	1.000	78	0%	50	38%	0	-	possibly_damaging(0.575)	deleterious(0)	deleterious(0.641)	HMMPfam_Patched
PTCHD1	139411	genome.wustl.edu	37	X	23410774	23410774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173495.2	+1	validated	p.A380V	1.000	161	0%	77	45.5%	0	-	possibly_damaging(0.509)	-	-	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain
PTCHD1	139411	genome.wustl.edu	37	X	23412219	23412219	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173495.2	+1	validated	p.P862S	1.000	146	0%	72	41.7%	1	100%	benign(0.039)	tolerated(0.34)	neutral(0.025)	NULL
CXorf58	254158	genome.wustl.edu	37	X	23956734	23956734	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152761.2	+1	validated	p.R286C	0.037	222	0%	114	40.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
EIF2S3	1968	genome.wustl.edu	37	X	24091279	24091279	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001415.3	+1	reviewed	p.S418	0.993	303	0%	178	44.4%	163	63.1%	-	-	-	superfamily_EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain,HMMPfam_eIF2_C
ZFX	7543	genome.wustl.edu	37	X	24228578	24228578	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003410.3	+1	reviewed	p.G501	0.995	231	0%	141	41.1%	6	83.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
FAM48B1	100130302	genome.wustl.edu	37	X	24381248	24381248	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136234.1	+1	inferred	p.A124V	0.028	276	0%	201	32.3%	0	-	-	-	-	NULL
FAM48B1	100130302	genome.wustl.edu	37	X	24381605	24381605	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136234.1	+1	inferred	p.S243L	0.010	87	0%	75	38.7%	0	-	-	-	-	NULL
FAM48B1	100130302	genome.wustl.edu	37	X	24382865	24382865	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136234.1	+1	inferred	p.V663A	0.000	30	0%	31	25.8%	0	-	-	-	-	NULL
LOC389842	389842	genome.wustl.edu	37	X	25664170	25664170	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_372200.7	-1	model	p.R92M	1.000	51	0%	55	36.4%	0	-	-	-	-	HMMPfam_Ran_BP1,HMMSmart_SM00160,superfamily_PH domain-like
LOC389842	389842	genome.wustl.edu	37	X	25664324	25664324	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_372200.7	-1	model	p.L41	0.982	70	0%	51	47.1%	0	-	-	-	-	HMMPfam_Ran_BP1,HMMSmart_SM00160,superfamily_PH domain-like
MAGEB18	286514	genome.wustl.edu	37	X	26157748	26157748	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173699.3	+1	validated	p.E216*	0.142	61	0%	48	47.9%	0	-	-	-	-	HMMPfam_MAGE
MAGEB10	139422	genome.wustl.edu	37	X	27839469	27839469	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182506.3	+1	reviewed	p.R16C	0.000	42	0%	20	55%	0	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
MAGEB10	139422	genome.wustl.edu	37	X	27840252	27840252	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182506.3	+1	reviewed	p.P277T	0.004	166	0%	69	14.5%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_MAGE
MAGEB10	139422	genome.wustl.edu	37	X	27840332	27840332	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182506.3	+1	reviewed	p.F303L	0.001	103	0%	44	40.9%	0	-	possibly_damaging(0.69)	deleterious(0.04)	deleterious(0.596)	NULL
LOC392435	392435	genome.wustl.edu	37	X	27850514	27850514	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343800.1	+1	model	p.A109V	0.000	22	0.000	5	0.800	0	-	-	-	-	NULL
IL1RAPL1	11141	genome.wustl.edu	37	X	29301121	29301121	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014271.3	+1	reviewed	p.R50Q	1.000	359	0%	179	50.3%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
IL1RAPL1	11141	genome.wustl.edu	37	X	29938174	29938174	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014271.3	+1	reviewed	p.N340K	1.000	342	0%	133	44.4%	0	-	benign(0.163)	tolerated(1)	neutral(0.015)	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin
MAGEB4	4115	genome.wustl.edu	37	X	30260501	30260501	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002367.3	+1	reviewed	p.G83	0.000	59	0%	62	12.9%	0	-	-	-	-	NULL
TAB3	257397	genome.wustl.edu	37	X	30872309	30872309	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152787.3	-1	reviewed	p.G491	1.000	106	0%	75	34.7%	2	0%	-	-	-	NULL
FTHL17	53940	genome.wustl.edu	37	X	31089601	31089601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031894.2	-1	reviewed	p.R157H	0.001	31	0%	42	47.6%	0	-	benign(0.068)	tolerated(0.15)	neutral(0.245)	HMMPfam_Ferritin,superfamily_Ferritin/RR_like
FTHL17	53940	genome.wustl.edu	37	X	31089747	31089747	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031894.2	-1	reviewed	p.E108D	0.999	37	0%	34	44.1%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Ferritin,superfamily_Ferritin/RR_like
DMD	1756	genome.wustl.edu	37	X	31165593	31165593	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000465285	-1	known	p.T1261A	0.990	37	0%	27	22.2%	12	0%	-	-	-	superfamily_Prefoldin
DMD	1756	genome.wustl.edu	37	X	31196049	31196049	+	Missense_Mutation	SNP	G	G	A	rs104894791	byCluster	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004006.2	-1	reviewed	p.A3421V	1.000	204	0.5%	85	48.2%	1	0%	probably_damaging(0.958)	deleterious(0.03)	deleterious(0.766)	NULL
DMD	1756	genome.wustl.edu	37	X	31645828	31645828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004006.2	-1	reviewed	p.D2727Y	1.000	232	0%	111	46.8%	0	-	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	31747812	31747812	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000465285	-1	known	p.R261C	1.000	480	0%	303	41.6%	0	-	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	31986488	31986488	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004006.2	-1	reviewed	p.E2194D	0.999	303	0%	78	42.3%	0	-	benign(0)	tolerated(0.6)	neutral(0.004)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	32404463	32404463	+	Silent	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004006.2	-1	reviewed	p.T1546	1.000	624	0%	160	40%	2	0%	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	33229399	33229399	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004006.2	-1	reviewed	p.Y11H	1.000	300	0%	57	40.4%	0	-	possibly_damaging(0.807)	deleterious(0)	deleterious(0.748)	NULL
FAM47A	158724	genome.wustl.edu	37	X	34148208	34148208	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203408.3	-1	validated	p.L730I	0.012	334	0%	185	47.6%	0	-	probably_damaging(0.979)	tolerated(0.16)	deleterious(0.481)	NULL
FAM47B	170062	genome.wustl.edu	37	X	34961966	34961966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152631.2	+1	validated	p.R340W	0.064	41	0%	36	47.2%	0	-	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	NULL
FAM47B	170062	genome.wustl.edu	37	X	34962518	34962518	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152631.2	+1	validated	p.R524W	0.000	101	0%	85	47.1%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
CXorf22	170063	genome.wustl.edu	37	X	35985783	35985783	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152632.3	+1	validated	p.D550Y	0.920	156	0%	48	31.2%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
CXorf30	645090	genome.wustl.edu	37	X	36379605	36379605	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001098843.3	+1	validated	p.K450N	0.873	158	0%	49	36.7%	0	-	benign(0.004)	tolerated(0.3)	neutral(0.029)	NULL
FAM47C	442444	genome.wustl.edu	37	X	37028324	37028324	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013736.2	+1	validated	p.R614H	0.000	50	0%	49	26.5%	0	-	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	NULL
FAM47C	442444	genome.wustl.edu	37	X	37029141	37029141	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013736.2	+1	validated	p.K886N	0.000	130	0%	102	39.2%	0	-	benign(0.195)	tolerated(0.25)	neutral(0.055)	NULL
TSPAN7	7102	genome.wustl.edu	37	X	38530645	38530645	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004615.3	+1	reviewed	p.S96P	1.000	518	0%	179	34.1%	11	0%	possibly_damaging(0.78)	tolerated(0.23)	neutral(0.333)	HMMPfam_Tetraspannin
TSPAN7	7102	genome.wustl.edu	37	X	38530697	38530697	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004615.3	+1	reviewed	p.R113H	1.000	404	0.2%	157	42.7%	12	100%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	superfamily_Tetraspanin,HMMPfam_Tetraspannin
TSPAN7	7102	genome.wustl.edu	37	X	38534999	38534999	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004615.3	+1	reviewed	p.T161I	1.000	84	0%	36	55.6%	21	100%	benign(0.021)	tolerated(0.2)	neutral(0.050)	superfamily_Tetraspanin,HMMPfam_Tetraspannin
TSPAN7	7102	genome.wustl.edu	37	X	38540518	38540518	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004615.3	+1	reviewed	p.A220T	1.000	126	0%	62	43.5%	17	88.2%	benign(0.159)	tolerated(0.13)	neutral(0.267)	HMMPfam_Tetraspannin
BCOR	54880	genome.wustl.edu	37	X	39913153	39913153	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123385.1	-1	reviewed	p.V1654	1.000	66	0%	38	55.3%	25	12%	-	-	-	NULL
BCOR	54880	genome.wustl.edu	37	X	39921421	39921421	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123385.1	-1	reviewed	p.L1467M	1.000	26	0%	17	58.8%	28	3.5%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
BCOR	54880	genome.wustl.edu	37	X	39932069	39932069	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123385.1	-1	reviewed	p.P844S	0.040	64	0%	67	43.3%	16	87.5%	benign(0.122)	deleterious(0)	neutral(0.455)	NULL
BCOR	54880	genome.wustl.edu	37	X	39933022	39933022	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001123385.1	-1	reviewed	p.S526L	0.058	56	0%	54	42.6%	23	100%	benign(0.032)	deleterious(0.02)	neutral(0.385)	NULL
ATP6AP2	10159	genome.wustl.edu	37	X	40448369	40448369	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005765.2	+1	reviewed	e2+1	1.000	145	0%	68	41.2%	0	-	-	-	-	-
ATP6AP2	10159	genome.wustl.edu	37	X	40450601	40450601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005765.2	+1	reviewed	p.S95L	0.998	111	0%	64	51.6%	115	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MED14	9282	genome.wustl.edu	37	X	40569376	40569376	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004229.3	-1	reviewed	p.Q343P	1.000	169	0%	60	53.3%	18	16.6%	possibly_damaging(0.78)	deleterious(0.04)	deleterious(0.640)	NULL
USP9X	8239	genome.wustl.edu	37	X	40988333	40988333	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039590.2	+1	reviewed	p.Q59	1.000	186	0%	79	40.5%	10	20%	-	-	-	NULL
USP9X	8239	genome.wustl.edu	37	X	40996173	40996173	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039590.2	+1	reviewed	p.F184L	1.000	320	0%	136	50.7%	11	81.8%	probably_damaging(0.955)	deleterious(0.01)	deleterious(0.804)	NULL
USP9X	8239	genome.wustl.edu	37	X	41003881	41003881	+	Splice_Site	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039590.2	+1	reviewed	e10+2	1.000	551	0%	196	36.7%	1	100%	-	-	-	-
USP9X	8239	genome.wustl.edu	37	X	41073963	41073963	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039590.2	+1	reviewed	e33+1	1.000	282	0%	130	37.7%	0	-	-	-	-	-
USP9X	8239	genome.wustl.edu	37	X	41078377	41078377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039590.2	+1	reviewed	p.S2153N	1.000	301	0%	148	50%	38	57.8%	probably_damaging(0.98)	deleterious(0.04)	deleterious(0.773)	NULL
DDX3X	1654	genome.wustl.edu	37	X	41200736	41200736	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001356.3	+1	reviewed	e4-1	1.000	329	0%	166	38%	6	83.3%	-	-	-	-
DDX3X	1654	genome.wustl.edu	37	X	41205842	41205842	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001356.3	+1	reviewed	p.R528C	1.000	415	0%	252	45.2%	234	60.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
CASK	8573	genome.wustl.edu	37	X	41437631	41437631	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003688.3	-1	reviewed	p.R489W	1.000	288	0.3%	127	56.7%	20	95%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_PDZ
GPR34	2857	genome.wustl.edu	37	X	41554985	41554985	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001097579.1	+1	validated	p.P33	0.000	113	0%	62	45.2%	1	0%	-	-	-	superfamily_Family A G protein-coupled receptor-like
GPR34	2857	genome.wustl.edu	37	X	41555341	41555341	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001097579.1	+1	validated	p.R152H	1.000	226	0%	92	46.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
GPR82	27197	genome.wustl.edu	37	X	41586764	41586764	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080817.4	+1	validated	p.V162G	0.001	65	0%	39	43.6%	0	-	possibly_damaging(0.688)	deleterious(0)	deleterious(0.691)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR82	27197	genome.wustl.edu	37	X	41586925	41586925	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080817.4	+1	validated	p.V216I	0.993	128	0%	70	38.6%	1	0%	benign(0.001)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
MAOB	4129	genome.wustl.edu	37	X	43656486	43656486	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000898.4	-1	reviewed	p.F168L	1.000	64	0%	27	44.4%	9	0%	benign(0.279)	tolerated(0.14)	neutral(0.279)	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain
MAOB	4129	genome.wustl.edu	37	X	43662652	43662652	+	Splice_Site	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000898.4	-1	reviewed	e4-1	1.000	178	0%	59	44.1%	0	-	-	-	-	-
FUNDC1	139341	genome.wustl.edu	37	X	44383468	44383468	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173794.3	-1	validated	p.G148	1.000	353	0%	182	51.1%	16	100%	-	-	-	HMMPfam_FUN14
DUSP21	63904	genome.wustl.edu	37	X	44703761	44703761	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022076.3	+1	reviewed	p.S128L	0.757	37	0%	32	46.9%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_DSPc,HMMSmart_DSPc,superfamily_SSF52799
KDM6A	7403	genome.wustl.edu	37	X	44929557	44929557	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021140.2	+1	reviewed	p.S886Y	1.000	96	0%	43	48.8%	19	68.4%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	NULL
ZNF674	641339	genome.wustl.edu	37	X	46359626	46359626	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039891.2	-1	validated	p.E466D	1.000	255	0%	118	44.1%	2	0%	possibly_damaging(0.833)	deleterious(0.03)	deleterious(0.682)	superfamily_SSF57667
ZNF674	641339	genome.wustl.edu	37	X	46359726	46359726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039891.2	-1	validated	p.R433I	0.885	298	0%	114	43.9%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF674	641339	genome.wustl.edu	37	X	46359810	46359810	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039891.2	-1	validated	p.R405K	1.000	312	0%	129	47.3%	1	100%	possibly_damaging(0.636)	tolerated(0.42)	neutral(0.237)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
CHST7	56548	genome.wustl.edu	37	X	46433678	46433678	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019886.2	+1	reviewed	p.I104	0.999	12	0%	12	41.7%	0	-	-	-	-	HMMPfam_Sulfotransfer_1,superfamily_SSF52540
SLC9A7	84679	genome.wustl.edu	37	X	46522040	46522040	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032591.1	-1	reviewed	p.V278M	1.000	118	0%	61	11.5%	3	0%	possibly_damaging(0.947)	deleterious(0.02)	deleterious(0.774)	HMMPfam_Na_H_Exchanger
RP2	6102	genome.wustl.edu	37	X	46713439	46713439	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006915.2	+1	reviewed	p.R211C	0.845	124	0%	60	46.7%	10	0%	probably_damaging(0.98)	deleterious(0.05)	deleterious(0.769)	NULL
PHF16	9767	genome.wustl.edu	37	X	46913650	46913650	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077445.1	+1	reviewed	p.E355K	1.000	58	0%	31	54.8%	8	0%	probably_damaging(0.959)	tolerated(0.08)	deleterious(0.703)	HMMSmart_PHD
PHF16	9767	genome.wustl.edu	37	X	46913745	46913745	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077445.1	+1	reviewed	p.S386	0.989	68	0%	32	31.2%	2	100%	-	-	-	NULL
RBM10	8241	genome.wustl.edu	37	X	47045565	47045565	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005676.3	+1	reviewed	p.A844	0.637	24	0%	18	61.1%	90	0%	-	-	-	NULL
UBA1	7317	genome.wustl.edu	37	X	47068949	47068949	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000377269	+1	known	p.G70	0.001	45	0%	39	38.5%	3	100%	-	-	-	NULL
USP11	8237	genome.wustl.edu	37	X	47100187	47100187	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004651.3	+1	reviewed	p.S296L	0.000	60	0%	43	53.5%	53	84.9%	benign(0)	tolerated(0.07)	neutral(0.319)	NULL
USP11	8237	genome.wustl.edu	37	X	47100774	47100774	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004651.3	+1	reviewed	p.I358	0.226	41	0%	48	47.9%	61	1.6%	-	-	-	HMMPfam_UCH,superfamily_SSF54001
ZNF157	7712	genome.wustl.edu	37	X	47270119	47270119	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003446.3	+1	reviewed	p.E80	0.875	94	0%	47	27.7%	0	-	-	-	-	HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZNF157	7712	genome.wustl.edu	37	X	47271794	47271794	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003446.3	+1	reviewed	p.G108S	0.874	276	0%	98	15.3%	0	-	benign(0)	tolerated(0.74)	neutral(0.002)	NULL
ARAF	369	genome.wustl.edu	37	X	47424532	47424532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001654.3	+1	reviewed	p.R151H	1.000	42	2.4%	55	41.8%	33	93.9%	benign(0.155)	deleterious(0.03)	neutral(0.378)	NULL
SYN1	6853	genome.wustl.edu	37	X	47464397	47464397	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006950.3	-1	reviewed	p.Y252H	1.000	431	0%	226	37.6%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Synapsin_C,superfamily_Glutathione synthetase ATP-binding domain-like
ELK1	2002	genome.wustl.edu	37	X	47498388	47498388	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001114123.1	-1	reviewed	p.A187V	0.906	7	0.000	6	0.833	29	93.1%	benign(0.048)	tolerated(0.24)	neutral(0.041)	NULL
ZNF81	347344	genome.wustl.edu	37	X	47775056	47775056	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007137.3	+1	reviewed	p.K337N	0.830	122	0%	22	50%	2	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF630	57232	genome.wustl.edu	37	X	47919430	47919430	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001037735.2	-1	validated	p.R134K	0.001	259	0%	82	41.5%	0	-	possibly_damaging(0.792)	deleterious(0)	deleterious(0.742)	NULL
SSX6	280657	genome.wustl.edu	37	X	47976466	47976466	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000304314	+1	known	p.D176N	0.002	176	0%	160	43.8%	0	-	benign(0.004)	tolerated(0.23)	neutral(0.042)	NULL
SSX5	6758	genome.wustl.edu	37	X	48054519	48054519	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021015.3	-1	reviewed	p.L39P	0.003	119	0%	90	52.2%	0	-	probably_damaging(0.97)	tolerated(0.05)	deleterious(0.758)	NULL
SSX1	6756	genome.wustl.edu	37	X	48118018	48118018	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005635.2	+1	reviewed	p.D78N	0.000	565	0%	258	21.3%	0	-	probably_damaging(1)	tolerated(0.31)	deleterious(0.527)	HMMSmart_KRAB,superfamily_Krueppel-associated_box
SSX1	6756	genome.wustl.edu	37	X	48123353	48123353	+	Splice_Site	SNP	G	G	A	rs181630989	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005635.2	+1	reviewed	e5+1	0.066	176	0%	71	40.8%	0	-	-	-	-	-
SSX9	280660	genome.wustl.edu	37	X	48159165	48159165	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000376909	-1	known	p.S123L	0.001	446	0%	208	35.6%	0	-	benign(0.004)	tolerated(0.2)	neutral(0.049)	NULL
SSX4	6759	genome.wustl.edu	37	X	48244867	48244867	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005636.3	+1	reviewed	p.N86	0.000	635	0.2%	417	22.8%	0	-	-	-	-	NULL
SLC38A5	92745	genome.wustl.edu	37	X	48319407	48319407	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033518.2	-1	validated	p.G306E	0.925	19	0%	15	53.3%	0	-	benign(0.134)	deleterious(0.01)	neutral(0.417)	HMMPfam_Aa_trans
FTSJ1	24140	genome.wustl.edu	37	X	48341093	48341093	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012280.2	+1	reviewed	p.I290V	0.019	35	0%	27	37%	54	98.1%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
PORCN	64840	genome.wustl.edu	37	X	48378850	48378850	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_203475.1	+1	reviewed	p.R458C	1.000	66	0%	73	41.1%	30	90%	benign(0.022)	tolerated(0.17)	neutral(0.060)	NULL
GATA1	2623	genome.wustl.edu	37	X	48650389	48650389	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002049.3	+1	reviewed	p.A120V	0.972	25	0%	20	35%	0	-	benign(0.028)	tolerated(0.12)	neutral(0.262)	NULL
HDAC6	10013	genome.wustl.edu	37	X	48661191	48661191	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006044.2	+1	reviewed	p.S31L	0.364	62	0%	52	28.8%	9	0%	unknown(0)	tolerated(1)	-	NULL
HDAC6	10013	genome.wustl.edu	37	X	48661282	48661282	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006044.2	+1	reviewed	p.R33Q	0.557	104	0%	70	44.3%	10	0%	unknown(0)	deleterious(0)	-	NULL
HDAC6	10013	genome.wustl.edu	37	X	48673430	48673430	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006044.2	+1	reviewed	p.A374V	0.998	12	0%	16	68.8%	31	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Hist_deacetyl,superfamily_SSF52768
HDAC6	10013	genome.wustl.edu	37	X	48674906	48674906	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006044.2	+1	reviewed	p.K553Q	0.063	39	0%	25	52%	29	0%	benign(0.203)	tolerated(0.44)	neutral(0.032)	HMMPfam_Hist_deacetyl,superfamily_SSF52768
HDAC6	10013	genome.wustl.edu	37	X	48681175	48681175	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006044.2	+1	reviewed	p.R828H	0.977	36	0%	47	36.2%	22	0%	possibly_damaging(0.921)	deleterious(0.04)	deleterious(0.720)	superfamily_SSF52768
ERAS	3266	genome.wustl.edu	37	X	48687920	48687920	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_181532.2	+1	provisional	p.I129	0.978	4	0.000	16	0.500	0	-	-	-	-	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540
TIMM17B	10245	genome.wustl.edu	37	X	48754113	48754113	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005834.3	-1	reviewed	p.G19*	1.000	30	0%	26	23.1%	23	95.6%	-	-	-	HMMPfam_Tim17
PIM2	11040	genome.wustl.edu	37	X	48775920	48775920	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006875.3	-1	reviewed	p.G22C	1.000	3	0.000	6	0.667	11	0%	probably_damaging(0.989)	deleterious(0.03)	deleterious(0.804)	superfamily_Kinase_like
OTUD5	55593	genome.wustl.edu	37	X	48781194	48781194	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017602.3	-1	reviewed	p.G472S	1.000	45	0%	33	39.4%	85	0%	benign(0)	tolerated(0.36)	neutral(0.020)	NULL
OTUD5	55593	genome.wustl.edu	37	X	48781228	48781228	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017602.3	-1	reviewed	p.S460	0.215	32	0%	27	48.1%	59	91.5%	-	-	-	NULL
OTUD5	55593	genome.wustl.edu	37	X	48781301	48781301	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017602.3	-1	reviewed	p.S436L	0.991	22	0%	13	46.2%	57	0%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
KCND1	3750	genome.wustl.edu	37	X	48826500	48826500	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004979.4	-1	reviewed	p.R60H	1.000	4	0.000	17	0.353	1	0%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
WDR45	11152	genome.wustl.edu	37	X	48934314	48934314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007075.3	-1	reviewed	p.R112C	1.000	43	0%	52	48.1%	71	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_WD40,superfamily_WD40_like
MAGIX	79917	genome.wustl.edu	37	X	49021411	49021411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024859.2	+1	validated	p.R164C	0.998	14	0%	18	44.4%	11	90.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
PRICKLE3	4007	genome.wustl.edu	37	X	49032170	49032170	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006150.3	-1	reviewed	p.R567H	0.995	36	0%	31	48.4%	22	0%	probably_damaging(0.977)	deleterious(0)	deleterious(0.863)	NULL
SYP	6855	genome.wustl.edu	37	X	49047957	49047957	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000472598	-1	known	p.A183V	0.998	10	0.000	8	0.625	0	-	-	-	-	NULL
CACNA1F	778	genome.wustl.edu	37	X	49071569	49071569	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005183.2	-1	reviewed	p.N1203D	1.000	86	0%	49	16.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Voltage-gated potassium channels
CACNA1F	778	genome.wustl.edu	37	X	49074955	49074955	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005183.2	-1	reviewed	p.L974M	1.000	52	0%	41	17.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1F	778	genome.wustl.edu	37	X	49081223	49081223	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005183.2	-1	reviewed	p.R637K	1.000	69	0%	50	42%	0	-	benign(0.029)	tolerated(1)	neutral(0.002)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1F	778	genome.wustl.edu	37	X	49088171	49088171	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005183.2	-1	reviewed	p.R82*	0.997	39	0%	44	40.9%	0	-	-	-	-	superfamily_Voltage-gated potassium channels
FOXP3	50943	genome.wustl.edu	37	X	49108005	49108005	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000455775	-1	known	p.W387*	0.000	27	0%	24	54.2%	0	-	-	-	-	HMMPfam_Fork_head,HMMSmart_FH
FOXP3	50943	genome.wustl.edu	37	X	49110411	49110411	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014009.3	-1	reviewed	p.L312M	1.000	7	0.000	13	0.538	6	33.3%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
PAGE1	8712	genome.wustl.edu	37	X	49458716	49458716	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003785.3	-1	reviewed	p.A51V	0.035	238	0%	145	48.3%	0	-	probably_damaging(1)	-	-	HMMPfam_GAGE
CLCN5	1184	genome.wustl.edu	37	X	49851062	49851062	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127898.1	+1	reviewed	p.S364	1.000	324	0%	120	15%	1	0%	-	-	-	HMMPfam_Voltage_CLC,superfamily_Clc chloride channel
CLCN5	1184	genome.wustl.edu	37	X	49855007	49855007	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127898.1	+1	reviewed	p.R660I	0.998	159	0%	55	32.7%	5	0%	benign(0.002)	tolerated(0.34)	neutral(0.023)	superfamily_CBS-domain
AKAP4	8852	genome.wustl.edu	37	X	49958367	49958367	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003886.2	-1	reviewed	p.L333F	0.293	51	0%	28	39.3%	0	-	possibly_damaging(0.95)	deleterious(0.03)	deleterious(0.758)	HMMPfam_AKAP_110,HMMSmart_SM00807
AKAP4	8852	genome.wustl.edu	37	X	49958506	49958506	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003886.2	-1	reviewed	p.M286I	0.990	86	0%	41	43.9%	0	-	benign(0.001)	tolerated(0.2)	neutral(0.049)	HMMPfam_AKAP_110,HMMSmart_SM00807
CCNB3	85417	genome.wustl.edu	37	X	50028198	50028198	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033031.2	+1	reviewed	p.P12H	0.003	132	0%	70	10%	0	-	unknown(0)	-	-	NULL
CCNB3	85417	genome.wustl.edu	37	X	50037981	50037981	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033031.2	+1	reviewed	p.R108Q	0.000	349	0%	130	43.8%	0	-	probably_damaging(0.963)	-	-	NULL
CCNB3	85417	genome.wustl.edu	37	X	50085252	50085252	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033031.2	+1	reviewed	p.D1190N	1.000	172	0%	123	42.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like
NUDT10	170685	genome.wustl.edu	37	X	51076183	51076183	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000356450	+1	known	p.V122	0.960	78	0%	91	30.8%	1	0%	-	-	-	HMMPfam_NUDIX,superfamily_Nudix
GSPT2	23708	genome.wustl.edu	37	X	51487904	51487904	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018094.4	+1	reviewed	p.T394	0.134	166	0%	102	42.2%	0	-	-	-	-	HMMPfam_GTP_EFTU,superfamily_SSF52540
GSPT2	23708	genome.wustl.edu	37	X	51488105	51488105	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018094.4	+1	reviewed	p.L461	0.994	152	0%	115	47%	1	0%	-	-	-	HMMPfam_GTP_EFTU_D2,superfamily_Translat_factor
MAGED1	9500	genome.wustl.edu	37	X	51641229	51641229	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001005333.1	+1	reviewed	p.L616F	1.000	234	0%	174	36.8%	217	94%	unknown(0)	tolerated(0.12)	-	HMMPfam_MAGE
XAGE5	170627	genome.wustl.edu	37	X	52842217	52842217	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_130775.2	+1	reviewed	p.D42	0.007	287	0%	227	37.4%	0	-	-	-	-	HMMPfam_GAGE
GPR173	54328	genome.wustl.edu	37	X	53105993	53105993	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018969.5	+1	reviewed	p.L64	1.000	17	0%	20	50%	2	100%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
TSPYL2	64061	genome.wustl.edu	37	X	53115119	53115119	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022117.3	+1	reviewed	p.N515	0.281	327	0%	244	10.2%	48	29.1%	-	-	-	NULL
KDM5C	8242	genome.wustl.edu	37	X	53222381	53222381	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004187.3	-1	reviewed	p.S1484N	1.000	9	0.000	21	0.524	86	18.6%	benign(0.002)	tolerated(0.25)	neutral(0.037)	NULL
KDM5C	8242	genome.wustl.edu	37	X	53223668	53223668	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004187.3	-1	reviewed	p.P1231T	1.000	23	0%	28	32.1%	117	11.9%	possibly_damaging(0.83)	tolerated(0.31)	neutral(0.343)	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD
KDM5C	8242	genome.wustl.edu	37	X	53225142	53225142	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004187.3	-1	reviewed	p.L1026F	1.000	104	0%	100	47%	64	71.8%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_PLU-1
KDM5C	8242	genome.wustl.edu	37	X	53227672	53227672	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004187.3	-1	reviewed	p.G839V	1.000	27	0%	31	32.3%	45	40%	benign(0.071)	tolerated(0.05)	neutral(0.350)	HMMPfam_PLU-1
KDM5C	8242	genome.wustl.edu	37	X	53245347	53245347	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004187.3	-1	reviewed	p.N230	1.000	99	0%	58	19%	28	28.5%	-	-	-	NULL
IQSEC2	23096	genome.wustl.edu	37	X	53272624	53272624	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001111125.1	-1	validated	p.D927N	1.000	22	0%	27	40.7%	4	100%	possibly_damaging(0.839)	deleterious(0.01)	deleterious(0.726)	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7
SMC1A	8243	genome.wustl.edu	37	X	53440219	53440219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006306.2	-1	reviewed	p.A193V	0.997	216	0%	176	45.5%	34	61.7%	benign(0.171)	tolerated(0.21)	neutral(0.059)	HMMPfam_SMC_N,superfamily_SSF52540
RIBC1	158787	genome.wustl.edu	37	X	53456822	53456822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031745.1	+1	provisional	p.R189C	0.546	27	0%	24	54.2%	3	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_RIB43A
HUWE1	10075	genome.wustl.edu	37	X	53561130	53561130	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031407.4	-1	reviewed	p.S4287Y	1.000	53	0%	36	38.9%	232	0.4%	unknown(0)	deleterious(0)	-	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
HUWE1	10075	genome.wustl.edu	37	X	53563539	53563539	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031407.4	-1	reviewed	p.P4076H	1.000	133	0%	87	37.9%	173	0%	unknown(0)	deleterious(0)	-	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
HUWE1	10075	genome.wustl.edu	37	X	53571575	53571575	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031407.4	-1	reviewed	p.L3733I	1.000	57	0%	33	33.3%	91	98.9%	unknown(0)	tolerated(0.53)	-	NULL
HUWE1	10075	genome.wustl.edu	37	X	53576423	53576423	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031407.4	-1	reviewed	p.R3178W	1.000	47	0%	26	34.6%	64	92.1%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
HUWE1	10075	genome.wustl.edu	37	X	53600893	53600893	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000427052	-1	known	p.E1077*	1.000	142	0%	140	12.1%	20	5%	possibly_damaging(0.794)	tolerated(0.14)	deleterious(0.547)	superfamily_ARM repeat
HUWE1	10075	genome.wustl.edu	37	X	53672376	53672376	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031407.4	-1	reviewed	p.V131M	1.000	152	0%	79	15.2%	22	27.2%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_DUF908
PHF8	23133	genome.wustl.edu	37	X	54012295	54012295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015107.2	-1	reviewed	p.L695F	0.998	154	0%	144	50%	26	96.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PHF8	23133	genome.wustl.edu	37	X	54029033	54029033	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015107.2	-1	reviewed	p.Q343H	1.000	95	0%	45	15.6%	29	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00558,superfamily_Clavaminate synthase-like
WNK3	65267	genome.wustl.edu	37	X	54278089	54278089	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020922.4	-1	reviewed	p.K800T	1.000	259	0%	124	41.1%	0	-	benign(0.059)	deleterious(0.01)	neutral(0.410)	superfamily_Kinase_like
FGD1	2245	genome.wustl.edu	37	X	54475605	54475605	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004463.2	-1	reviewed	p.R749C	1.000	36	0%	45	42.2%	21	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FYVE,HMMSmart_FYVE,superfamily_FYVE_PHD_ZnF
FGD1	2245	genome.wustl.edu	37	X	54496461	54496461	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004463.2	-1	reviewed	p.Q363	1.000	25	0%	25	48%	16	0%	-	-	-	superfamily_DH-domain
MAGED2	10916	genome.wustl.edu	37	X	54837554	54837554	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014599.4	+1	reviewed	p.Q280*	0.972	129	0%	81	51.9%	21	23.8%	-	-	-	NULL
TRO	7216	genome.wustl.edu	37	X	54949114	54949114	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039705.1	+1	reviewed	p.A50V	0.714	42	0%	37	32.4%	0	-	possibly_damaging(0.631)	tolerated(0.16)	neutral(0.280)	NULL
TRO	7216	genome.wustl.edu	37	X	54950191	54950191	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039705.1	+1	reviewed	p.R409I	0.996	42	0%	28	50%	0	-	possibly_damaging(0.832)	deleterious(0.03)	deleterious(0.681)	NULL
PFKFB1	5207	genome.wustl.edu	37	X	54985328	54985328	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002625.2	-1	reviewed	p.R139*	1.000	286	0%	116	40.5%	0	-	-	-	-	HMMPfam_6PF2K,superfamily_SSF52540
APEX2	27301	genome.wustl.edu	37	X	55033333	55033333	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014481.2	+1	reviewed	p.R341H	0.000	25	0%	20	50%	41	0%	benign(0.042)	tolerated(0.13)	neutral(0.255)	NULL
APEX2	27301	genome.wustl.edu	37	X	55033511	55033511	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014481.2	+1	reviewed	p.S400	0.000	57	0%	48	56.2%	24	0%	-	-	-	NULL
ALAS2	212	genome.wustl.edu	37	X	55042168	55042168	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000032.4	-1	reviewed	p.I337	1.000	60	0%	32	46.9%	0	-	-	-	-	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
ALAS2	212	genome.wustl.edu	37	X	55043989	55043989	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000032.4	-1	reviewed	p.K311N	1.000	329	0%	178	50%	0	-	benign(0.124)	deleterious(0.03)	neutral(0.374)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
PAGE2	203569	genome.wustl.edu	37	X	55116502	55116502	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_207339.2	+1	provisional	p.D17Y	0.004	432	0.2%	212	43.4%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	HMMPfam_GAGE
FAM104B	90736	genome.wustl.edu	37	X	55172671	55172671	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138362.3	-1	validated	p.N66S	0.010	222	0.5%	102	17.6%	26	0%	possibly_damaging(0.791)	tolerated(1)	neutral(0.296)	NULL
PAGE3	139793	genome.wustl.edu	37	X	55289728	55289728	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000374951	-1	known	p.Y50C	0.000	392	0%	215	43.3%	0	-	probably_damaging(0.982)	tolerated(0.18)	deleterious(0.482)	HMMPfam_GAGE
MAGEH1	28986	genome.wustl.edu	37	X	55478990	55478990	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014061.3	+1	reviewed	p.A61	0.001	23	0%	15	46.7%	2	0%	-	-	-	NULL
FOXR2	139628	genome.wustl.edu	37	X	55650538	55650538	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198451.3	+1	validated	p.P132S	0.000	85	0%	38	31.6%	0	-	benign(0.001)	tolerated(1)	-	NULL
SPIN2B	474343	genome.wustl.edu	37	X	57146310	57146310	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006681.1	-1	validated	p.V251	1.000	345	0.3%	219	29.2%	4	100%	-	-	-	HMMPfam_Spin-Ssty
SPIN2B	474343	genome.wustl.edu	37	X	57146610	57146610	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006681.1	-1	validated	p.V151	1.000	377	0%	268	38.1%	9	0%	-	-	-	HMMPfam_Spin-Ssty
ZXDB	158586	genome.wustl.edu	37	X	57619643	57619643	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007157.3	+1	validated	p.E388K	1.000	131	0%	113	47.8%	3	0%	possibly_damaging(0.616)	deleterious(0.04)	deleterious(0.564)	superfamily_C2H2 and C2HC zinc fingers
FAM123B	139285	genome.wustl.edu	37	X	63410874	63410874	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152424.3	-1	reviewed	p.A765T	1.000	85	0%	43	37.2%	10	0%	possibly_damaging(0.842)	deleterious(0)	deleterious(0.766)	NULL
FAM123B	139285	genome.wustl.edu	37	X	63411447	63411447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152424.3	-1	reviewed	p.R574W	0.035	35	2.9%	24	58.3%	2	0%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	NULL
MTMR8	55613	genome.wustl.edu	37	X	63488790	63488790	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017677.3	-1	reviewed	p.T581I	0.960	146	0%	74	43.2%	0	-	benign(0.068)	deleterious(0.01)	neutral(0.410)	NULL
MTMR8	55613	genome.wustl.edu	37	X	63551632	63551632	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000442913	-1	known	p.W189*	1.000	75	0%	30	43.3%	3	100%	possibly_damaging(0.922)	deleterious(0.01)	deleterious(0.777)	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
ZC3H12B	340554	genome.wustl.edu	37	X	64709025	64709025	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010888.3	+1	reviewed	p.A104V	1.000	35	0%	27	48.1%	0	-	possibly_damaging(0.565)	deleterious(0.02)	deleterious(0.576)	NULL
ZC3H12B	340554	genome.wustl.edu	37	X	64719016	64719016	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010888.3	+1	reviewed	p.V285M	1.000	204	0%	78	35.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZC3H12B	340554	genome.wustl.edu	37	X	64719856	64719856	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010888.3	+1	reviewed	p.Q348	0.995	125	0.8%	61	32.8%	0	-	-	-	-	NULL
ZC3H12B	340554	genome.wustl.edu	37	X	64722748	64722748	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001010888.3	+1	reviewed	p.R713W	1.000	53	0%	42	38.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LOC100288788	100288788	genome.wustl.edu	37	X	65177023	65177023	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343822.1	-1	model	p.R6C	1.000	223	0.4%	85	49.4%	0	-	-	-	-	NULL
VSIG4	11326	genome.wustl.edu	37	X	65252504	65252504	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007268.2	-1	reviewed	p.A167V	0.736	217	0.5%	78	42.3%	1	0%	probably_damaging(1)	tolerated(0.27)	deleterious(0.533)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
HEPH	9843	genome.wustl.edu	37	X	65418740	65418740	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138737.3	+1	reviewed	p.F581L	0.980	335	0%	122	40.2%	2	0%	possibly_damaging(0.501)	tolerated(0.06)	deleterious(0.490)	superfamily_Cupredoxins
STARD8	9754	genome.wustl.edu	37	X	67942415	67942415	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142503.2	+1	reviewed	p.R909H	0.003	24	0%	21	47.6%	3	0%	benign(0.02)	tolerated(0.14)	neutral(0.251)	HMMPfam_START,HMMSmart_SM00234,superfamily_Bet v1-like
AWAT2	158835	genome.wustl.edu	37	X	69262153	69262153	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002254.1	-1	reviewed	p.R244H	0.001	103	0%	56	42.9%	0	-	benign(0.004)	tolerated(0.54)	neutral(0.007)	HMMPfam_DAGAT
AWAT2	158835	genome.wustl.edu	37	X	69263463	69263463	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001002254.1	-1	reviewed	p.A113S	0.046	81	0%	53	49.1%	0	-	benign(0)	tolerated(0.74)	neutral(0.002)	HMMPfam_DAGAT
AWAT1	158833	genome.wustl.edu	37	X	69459730	69459730	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013579.2	+1	reviewed	p.F260V	0.975	204	0%	102	37.3%	0	-	probably_damaging(0.961)	tolerated(0.86)	neutral(0.405)	HMMPfam_DAGAT
ARR3	407	genome.wustl.edu	37	X	69496001	69496001	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004312.2	+1	validated	p.R72Q	1.000	60	0%	58	43.1%	0	-	possibly_damaging(0.939)	tolerated(0.21)	neutral(0.428)	HMMPfam_Arrestin_N,superfamily_E set domains,PatternScan_ARRESTINS
KIF4A	24137	genome.wustl.edu	37	X	69521844	69521844	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012310.4	+1	reviewed	p.A204D	1.000	219	0%	84	40.5%	9	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF4A	24137	genome.wustl.edu	37	X	69607078	69607078	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012310.4	+1	reviewed	p.Q721	0.517	112	0%	45	46.7%	10	100%	-	-	-	NULL
KIF4A	24137	genome.wustl.edu	37	X	69639541	69639541	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012310.4	+1	reviewed	p.D1135Y	1.000	160	0%	87	54%	23	0%	possibly_damaging(0.843)	deleterious(0.01)	deleterious(0.729)	NULL
DLG3	1741	genome.wustl.edu	37	X	69673551	69673551	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021120.3	+1	reviewed	p.E404*	1.000	92	0%	58	39.7%	5	0%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
DLG3	1741	genome.wustl.edu	37	X	69699019	69699019	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021120.3	+1	reviewed	p.S475	0.774	177	0%	78	41%	21	0%	-	-	-	superfamily_PDZ domain-like
DLG3	1741	genome.wustl.edu	37	X	69719055	69719055	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021120.3	+1	reviewed	p.G634S	1.000	120	0%	73	32.9%	41	2.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SH3-domain,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
TEX11	56159	genome.wustl.edu	37	X	69748986	69748986	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003811.1	-1	reviewed	p.P928T	0.000	176	0%	82	45.1%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
TEX11	56159	genome.wustl.edu	37	X	69773206	69773206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003811.1	-1	reviewed	p.K798N	0.029	446	0.4%	142	50%	0	-	benign(0.152)	tolerated(0.46)	neutral(0.026)	NULL
TEX11	56159	genome.wustl.edu	37	X	69960620	69960620	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001003811.1	-1	reviewed	p.T273	0.000	393	0%	138	47.1%	0	-	-	-	-	HMMPfam_SPO22,superfamily_TPR-like
FOXO4	4303	genome.wustl.edu	37	X	70321229	70321229	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005938.3	+1	reviewed	p.M383I	1.000	17	0%	13	30.8%	15	0%	benign(0.055)	deleterious(0.01)	neutral(0.409)	NULL
CXorf65	158830	genome.wustl.edu	37	X	70323892	70323892	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001025265.2	-1	validated	p.D166G	0.002	376	0%	192	46.9%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
MED12	9968	genome.wustl.edu	37	X	70340858	70340858	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005120.2	+1	reviewed	p.Q197	1.000	68	0%	48	31.2%	11	0%	-	-	-	NULL
MED12	9968	genome.wustl.edu	37	X	70342187	70342187	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005120.2	+1	reviewed	p.F413	0.998	119	0%	89	41.6%	20	85%	-	-	-	NULL
MED12	9968	genome.wustl.edu	37	X	70345927	70345927	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005120.2	+1	reviewed	p.A822T	1.000	53	0%	34	11.8%	23	17.3%	benign(0.12)	tolerated(0.94)	neutral(0.009)	NULL
MED12	9968	genome.wustl.edu	37	X	70346974	70346974	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005120.2	+1	reviewed	p.V947	1.000	39	0%	45	40%	19	0%	-	-	-	NULL
MED12	9968	genome.wustl.edu	37	X	70348204	70348204	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005120.2	+1	reviewed	p.A1090T	1.000	129	0%	92	44.6%	17	0%	possibly_damaging(0.838)	tolerated(0.22)	neutral(0.362)	NULL
MED12	9968	genome.wustl.edu	37	X	70349037	70349037	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005120.2	+1	reviewed	p.P1183	1.000	90	0%	50	40%	28	0%	-	-	-	NULL
MED12	9968	genome.wustl.edu	37	X	70349538	70349538	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005120.2	+1	reviewed	p.E1234K	1.000	64	0%	44	13.6%	24	33.3%	benign(0.012)	tolerated(0.75)	neutral(0.002)	NULL
MED12	9968	genome.wustl.edu	37	X	70351409	70351409	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005120.2	+1	reviewed	p.Q1353K	1.000	81	0%	72	38.9%	40	0%	benign(0.384)	deleterious(0.01)	deleterious(0.528)	NULL
MED12	9968	genome.wustl.edu	37	X	70357482	70357482	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000444034	+1	known	p.P162H	1.000	127	0%	96	45.8%	47	2.1%	-	-	-	NULL
NLGN3	54413	genome.wustl.edu	37	X	70367880	70367880	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018977.3	+1	reviewed	p.S94L	0.999	10	0%	22	54.5%	3	0%	benign(0.327)	tolerated(0.1)	neutral(0.389)	HMMPfam_COesterase,superfamily_SSF53474
NLGN3	54413	genome.wustl.edu	37	X	70367959	70367959	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018977.3	+1	reviewed	p.P120	0.919	18	0%	34	44.1%	2	0%	-	-	-	HMMPfam_COesterase,superfamily_SSF53474
NLGN3	54413	genome.wustl.edu	37	X	70387059	70387059	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018977.3	+1	reviewed	p.H351R	1.000	51	0%	38	18.4%	0	-	benign(0.014)	tolerated(0.08)	neutral(0.300)	HMMPfam_COesterase,superfamily_SSF53474
NLGN3	54413	genome.wustl.edu	37	X	70389298	70389298	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018977.3	+1	reviewed	p.N613S	1.000	68	0%	57	28.1%	2	0%	benign(0.006)	tolerated(0.26)	neutral(0.034)	superfamily_SSF53474
NLGN3	54413	genome.wustl.edu	37	X	70389892	70389892	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018977.3	+1	reviewed	p.A811V	1.000	51	0%	22	18.2%	4	0%	benign(0.022)	tolerated(0.24)	neutral(0.038)	NULL
GJB1	2705	genome.wustl.edu	37	X	70443856	70443856	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000166.5	+1	reviewed	p.H100R	1.000	73	0%	74	45.9%	15	0%	benign(0.103)	tolerated(0.51)	neutral(0.017)	HMMPfam_Connexin
ZMYM3	9203	genome.wustl.edu	37	X	70461170	70461170	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005096.3	-1	reviewed	p.R1276I	1.000	177	0%	121	43%	27	100%	probably_damaging(0.96)	deleterious(0.01)	deleterious(0.808)	NULL
ZMYM3	9203	genome.wustl.edu	37	X	70467746	70467746	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005096.3	-1	reviewed	p.L662	1.000	49	0%	38	23.7%	22	90.9%	-	-	-	HMMPfam_zf-FCS,HMMSmart_SM00746
NONO	4841	genome.wustl.edu	37	X	70514185	70514185	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145408.1	+1	reviewed	p.R153*	0.882	134	0%	94	44.7%	34	55.8%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
NONO	4841	genome.wustl.edu	37	X	70517747	70517747	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145408.1	+1	reviewed	p.R364W	1.000	24	4.2%	22	59.1%	47	53.1%	unknown(0)	deleterious(0)	-	NULL
ITGB1BP2	26548	genome.wustl.edu	37	X	70522357	70522357	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012278.1	+1	provisional	p.L90M	1.000	101	0%	67	40.3%	0	-	benign(0.28)	tolerated(0.24)	neutral(0.123)	NULL
ITGB1BP2	26548	genome.wustl.edu	37	X	70524820	70524820	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012278.1	+1	provisional	p.I274M	1.000	75	0%	50	50%	2	0%	benign(0.276)	deleterious(0)	deleterious(0.474)	superfamily_HSP20_chap,HMMPfam_CS
TAF1	6872	genome.wustl.edu	37	X	70596822	70596822	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004606.3	+1	reviewed	p.I185	1.000	106	0%	55	54.5%	2	0%	-	-	-	NULL
TAF1	6872	genome.wustl.edu	37	X	70608170	70608170	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004606.3	+1	reviewed	p.S857	0.551	128	0%	75	37.3%	2	0%	-	-	-	NULL
TAF1	6872	genome.wustl.edu	37	X	70678092	70678092	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004606.3	+1	reviewed	p.P1667H	1.000	327	0%	186	51.6%	13	100%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
ACRC	93953	genome.wustl.edu	37	X	70830565	70830565	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_052957.4	+1	validated	p.K549R	1.000	89	0%	74	43.2%	1	0%	benign(0.107)	tolerated(0.6)	neutral(0.013)	HMMSmart_SM00731,HMMPfam_SprT-like
RGAG4	340526	genome.wustl.edu	37	X	71350530	71350530	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024455.3	-1	validated	p.E287	0.996	64	0%	69	39.1%	7	0%	-	-	-	NULL
NHSL2	340527	genome.wustl.edu	37	X	71360404	71360404	+	Silent	SNP	T	T	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013627.2	+1	provisional	p.P636	0.991	66	0%	45	17.8%	0	-	-	-	-	NULL
PIN4	5303	genome.wustl.edu	37	X	71406383	71406383	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006223.3	+1	reviewed	p.K64R	1.000	152	0%	92	26.1%	49	12.2%	probably_damaging(0.985)	tolerated(0.05)	deleterious(0.777)	superfamily_SSF54534
ERCC6L	54821	genome.wustl.edu	37	X	71425309	71425309	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017669.2	-1	validated	p.V1103A	0.997	142	0%	58	55.2%	5	100%	benign(0.209)	deleterious(0)	neutral(0.465)	NULL
ERCC6L	54821	genome.wustl.edu	37	X	71425838	71425838	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017669.2	-1	validated	p.A927T	0.000	80	0%	40	52.5%	13	100%	benign(0.01)	deleterious(0)	neutral(0.445)	NULL
ERCC6L	54821	genome.wustl.edu	37	X	71427103	71427103	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017669.2	-1	validated	p.R505Q	0.989	240	0%	66	42.4%	5	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540
RPS4X	6191	genome.wustl.edu	37	X	71493733	71493733	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001007.4	-1	reviewed	p.P150	0.913	110	0%	69	47.8%	2774	30.3%	-	-	-	HMMPfam_Ribosomal_S4e
PHKA1	5255	genome.wustl.edu	37	X	71846847	71846847	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002637.3	-1	reviewed	p.M589I	1.000	476	0%	243	47.3%	3	100%	benign(0.001)	tolerated(0.19)	neutral(0.050)	HMMPfam_PHK_AB
PHKA1	5255	genome.wustl.edu	37	X	71870282	71870282	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002637.3	-1	reviewed	p.R428C	1.000	228	0%	108	38.9%	9	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases
NAP1L2	4674	genome.wustl.edu	37	X	72433246	72433246	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021963.2	-1	reviewed	p.V361	1.000	116	0%	65	49.2%	1	100%	-	-	-	HMMPfam_NAP
NAP1L2	4674	genome.wustl.edu	37	X	72434021	72434021	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021963.2	-1	reviewed	p.S103N	1.000	310	0%	195	45.1%	4	100%	probably_damaging(0.978)	tolerated(0.08)	deleterious(0.720)	NULL
BMP2KL	347359	genome.wustl.edu	37	X	73406623	73406623	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000373488	+1	known	p.D290A	1.000	17	0%	13	46.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BMP2KL	347359	genome.wustl.edu	37	X	73406946	73406946	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000373488	+1	known	p.E398K	0.822	73	0%	47	53.2%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
RLIM	51132	genome.wustl.edu	37	X	73811327	73811327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016120.3	-1	reviewed	p.P608H	1.000	147	0%	65	40%	11	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box
KIAA2022	340533	genome.wustl.edu	37	X	73960045	73960045	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000424929	-1	known	p.S51P	1.000	325	0%	123	47.2%	2	0%	-	-	-	NULL
KIAA2022	340533	genome.wustl.edu	37	X	73960933	73960933	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008537.2	-1	validated	p.N1153	0.972	257	0%	93	44.1%	0	-	-	-	-	NULL
KIAA2022	340533	genome.wustl.edu	37	X	73961338	73961338	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008537.2	-1	validated	p.G1018	0.995	120	0%	49	42.9%	1	100%	-	-	-	NULL
KIAA2022	340533	genome.wustl.edu	37	X	73963734	73963734	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008537.2	-1	validated	p.T220A	0.999	262	0%	93	40.9%	0	-	benign(0)	tolerated(0.8)	neutral(0.001)	NULL
ZDHHC15	158866	genome.wustl.edu	37	X	74698795	74698795	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144969.2	-1	reviewed	p.A63	1.000	277	0%	127	40.9%	0	-	-	-	-	NULL
ZDHHC15	158866	genome.wustl.edu	37	X	74742852	74742852	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144969.2	-1	reviewed	p.R3Q	0.995	20	0%	15	53.3%	0	-	probably_damaging(0.953)	tolerated(0.12)	deleterious(0.657)	NULL
MAGEE2	139599	genome.wustl.edu	37	X	75004747	75004747	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138703.4	-1	validated	p.P47H	0.000	20	0%	25	72%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
CXorf26	51260	genome.wustl.edu	37	X	75397503	75397503	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000373357	+1	known	p.I117T	0.999	268	0%	143	37.1%	30	0%	possibly_damaging(0.767)	-	-	NULL
ATRX	546	genome.wustl.edu	37	X	76849266	76849266	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000489.3	-1	reviewed	p.D2004Y	1.000	219	0%	71	46.5%	9	100%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ATRX	546	genome.wustl.edu	37	X	76872161	76872161	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000400866	-1	known	p.Q118*	1.000	446	0%	150	39.3%	11	0%	probably_damaging(0.987)	deleterious(0.03)	deleterious(0.801)	HMMPfam_SNF2_N
ATRX	546	genome.wustl.edu	37	X	76909629	76909629	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000489.3	-1	reviewed	p.R1426*	0.959	785	0%	289	32.9%	10	0%	-	-	-	NULL
PGAM4	441531	genome.wustl.edu	37	X	77224704	77224704	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001029891.2	-1	reviewed	p.D144	1.000	55	0%	49	28.6%	50	0%	-	-	-	HMMPfam_PGAM,superfamily_SSF53254
ATP7A	538	genome.wustl.edu	37	X	77301869	77301869	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000052.4	+1	reviewed	p.S1435	0.993	170	0%	49	63.3%	3	66.6%	-	-	-	NULL
PGK1	5230	genome.wustl.edu	37	X	77369532	77369532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000291.3	+1	reviewed	p.D98N	1.000	101	0%	56	44.6%	385	95.3%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_PGK,superfamily_Phosphoglycerate kinase
TAF9B	51616	genome.wustl.edu	37	X	77392459	77392459	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015975.4	-1	reviewed	p.R145Q	1.000	260	0%	144	39.6%	18	0%	probably_damaging(0.966)	tolerated(0.23)	neutral(0.449)	NULL
TAF9B	51616	genome.wustl.edu	37	X	77393326	77393326	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015975.4	-1	reviewed	p.P109S	1.000	355	0%	217	42.9%	18	94.4%	benign(0.078)	deleterious(0.02)	neutral(0.389)	HMMPfam_TFIID-31kDa
TAF9B	51616	genome.wustl.edu	37	X	77394388	77394388	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_015975.4	-1	reviewed	p.T29A	1.000	404	0%	215	49.8%	21	0%	possibly_damaging(0.947)	tolerated(0.07)	deleterious(0.710)	HMMPfam_TFIID-31kDa,superfamily_Histone-fold
ZCCHC5	203430	genome.wustl.edu	37	X	77913179	77913179	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152694.2	-1	reviewed	p.D247N	0.000	47	0%	30	56.7%	0	-	possibly_damaging(0.543)	tolerated(0.24)	neutral(0.222)	NULL
P2RY10	27334	genome.wustl.edu	37	X	78216409	78216409	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014499.2	+1	reviewed	p.R131M	1.000	168	0%	40	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
ITM2A	9452	genome.wustl.edu	37	X	78616662	78616662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004867.4	-1	reviewed	p.R239H	1.000	173	0%	54	35.2%	117	97.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ITM2A	9452	genome.wustl.edu	37	X	78618553	78618553	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004867.4	-1	reviewed	p.L109	0.170	133	0%	71	42.3%	174	0%	-	-	-	NULL
TBX22	50945	genome.wustl.edu	37	X	79281214	79281214	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109878.1	+1	reviewed	p.R191W	1.000	62	0%	36	52.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,PatternScan_TBOX_2
TBX22	50945	genome.wustl.edu	37	X	79282777	79282777	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001109878.1	+1	reviewed	p.R274I	1.000	191	0%	66	43.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd
FAM46D	169966	genome.wustl.edu	37	X	79698043	79698043	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152630.4	+1	validated	p.S2Y	1.000	138	0%	38	36.8%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
BRWD3	254065	genome.wustl.edu	37	X	79942391	79942391	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153252.4	-1	reviewed	p.R1326*	1.000	410	0%	108	41.7%	5	40%	-	-	-	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain
BRWD3	254065	genome.wustl.edu	37	X	79945290	79945290	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153252.4	-1	reviewed	p.R1262*	0.456	513	0.2%	157	46.5%	6	100%	-	-	-	superfamily_Bromodomain
BRWD3	254065	genome.wustl.edu	37	X	79984300	79984300	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153252.4	-1	reviewed	p.L446P	1.000	158	0%	55	41.8%	6	0%	probably_damaging(0.986)	tolerated(0.21)	deleterious(0.478)	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,PatternScan_WD_REPEATS_1
BRWD3	254065	genome.wustl.edu	37	X	79984339	79984339	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153252.4	-1	reviewed	p.R433H	1.000	154	0%	66	40.9%	8	75%	probably_damaging(1)	tolerated(0.37)	deleterious(0.519)	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase
HMGN5	79366	genome.wustl.edu	37	X	80370324	80370324	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_030763.2	-1	reviewed	p.D225Y	0.101	1608	0%	836	40%	19	89.4%	unknown(0)	tolerated(0.05)	-	NULL
SH3BGRL	6451	genome.wustl.edu	37	X	80532664	80532664	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003022.2	+1	validated	p.R76H	1.000	126	0%	53	50.9%	71	0%	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	HMMPfam_SH3BGR,superfamily_Thioredoxin-like
CYLC1	1538	genome.wustl.edu	37	X	83129600	83129600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021118.1	+1	provisional	p.K628N	0.006	147	0%	25	52%	0	-	unknown(0)	tolerated(0.07)	-	NULL
RPS6KA6	27330	genome.wustl.edu	37	X	83359617	83359617	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014496.4	-1	reviewed	p.G502*	1.000	319	0%	132	44.7%	0	-	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
HDX	139324	genome.wustl.edu	37	X	83599435	83599435	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144657.4	-1	validated	p.R495C	1.000	190	0%	39	25.6%	0	-	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
SATL1	340562	genome.wustl.edu	37	X	84363393	84363393	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012980.2	-1	validated	p.W7*	0.000	241	0%	169	48.5%	0	-	-	-	-	NULL
ZNF711	7552	genome.wustl.edu	37	X	84510294	84510294	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021998.4	+1	reviewed	p.D37N	1.000	209	0%	118	42.4%	4	100%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	NULL
ZNF711	7552	genome.wustl.edu	37	X	84526417	84526417	+	Silent	SNP	C	C	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021998.4	+1	reviewed	p.V623	0.886	97	0%	19	52.6%	10	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
POF1B	79983	genome.wustl.edu	37	X	84634238	84634238	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024921.3	-1	reviewed	p.V74	0.947	167	0%	117	39.3%	0	-	-	-	-	NULL
CHM	1121	genome.wustl.edu	37	X	85166298	85166298	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000390.2	-1	reviewed	p.V404	0.884	237	0%	74	36.5%	5	0%	-	-	-	HMMPfam_GDI,superfamily_SSF51905
DACH2	117154	genome.wustl.edu	37	X	85403714	85403714	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_053281.3	+1	reviewed	p.S30	0.943	39	0%	27	44.4%	0	-	-	-	-	NULL
KLHL4	56062	genome.wustl.edu	37	X	86890615	86890615	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_057162.2	+1	reviewed	p.Y589H	0.998	202	0%	108	38%	0	-	benign(0.296)	tolerated(0.53)	neutral(0.099)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
PCDH11X	27328	genome.wustl.edu	37	X	91090552	91090552	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032968.3	+1	reviewed	p.V17M	0.624	137	0%	77	51.9%	5	100%	possibly_damaging(0.658)	deleterious(0.05)	deleterious(0.578)	NULL
PCDH11X	27328	genome.wustl.edu	37	X	91132557	91132557	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032968.3	+1	reviewed	p.D440Y	1.000	133	0%	93	39.8%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDH11X	27328	genome.wustl.edu	37	X	91133981	91133981	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032968.3	+1	reviewed	p.Q914H	1.000	271	0%	145	41.4%	2	100%	benign(0.023)	deleterious(0.01)	neutral(0.407)	HMMPfam_Protocadherin
PCDH11X	27328	genome.wustl.edu	37	X	91873470	91873470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_032968.3	+1	reviewed	p.T1192I	0.543	124	0%	72	30.6%	1	0%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
FAM133A	286499	genome.wustl.edu	37	X	92965163	92965163	+	Nonstop_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173698.2	+1	validated	p.*249Q	0.007	12	0.000	7	0.571	0	-	-	-	-	NULL
DIAPH2	1730	genome.wustl.edu	37	X	95940138	95940138	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006729.4	+1	reviewed	p.S27	0.020	8	0.000	16	0.375	4	0%	-	-	-	NULL
DIAPH2	1730	genome.wustl.edu	37	X	95993592	95993592	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006729.4	+1	reviewed	p.R58Q	1.000	170	0%	48	54.2%	0	-	unknown(0)	deleterious(0.01)	-	NULL
RPA4	29935	genome.wustl.edu	37	X	96139333	96139333	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_013347.4	+1	reviewed	p.S8	0.000	99	0%	43	41.9%	1	0%	-	-	-	NULL
DIAPH2	1730	genome.wustl.edu	37	X	96197087	96197087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006729.4	+1	reviewed	p.D466Y	1.000	225	0%	103	16.5%	2	100%	unknown(0)	deleterious(0)	-	HMMPfam_Drf_FH3
DIAPH2	1730	genome.wustl.edu	37	X	96213044	96213044	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006729.4	+1	reviewed	p.G611E	0.636	141	0%	86	54.7%	3	100%	unknown(0)	tolerated(0.3)	-	superfamily_Formin homology 2 domain (FH2 domain)
DIAPH2	1730	genome.wustl.edu	37	X	96603183	96603183	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006729.4	+1	reviewed	p.L971	0.996	260	0%	95	38.9%	6	0%	-	-	-	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
PCDH19	57526	genome.wustl.edu	37	X	99657681	99657681	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105243.1	-1	reviewed	p.Q772H	1.000	130	0%	118	42.4%	21	100%	probably_damaging(0.967)	tolerated(0.4)	neutral(0.425)	NULL
PCDH19	57526	genome.wustl.edu	37	X	99662008	99662008	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001105243.1	-1	reviewed	p.E530K	1.000	37	0%	37	45.9%	42	100%	probably_damaging(0.973)	deleterious(0.05)	deleterious(0.760)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
TNMD	64102	genome.wustl.edu	37	X	99854665	99854665	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022144.2	+1	reviewed	p.V302A	1.000	59	0%	42	57.1%	0	-	possibly_damaging(0.465)	deleterious(0)	deleterious(0.598)	NULL
SRPX2	27286	genome.wustl.edu	37	X	99905837	99905837	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014467.2	+1	reviewed	p.P46	0.681	262	0%	118	44.1%	0	-	-	-	-	NULL
SRPX2	27286	genome.wustl.edu	37	X	99922277	99922277	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014467.2	+1	reviewed	p.K323T	1.000	183	0%	93	31.2%	0	-	benign(0.031)	tolerated(0.35)	neutral(0.022)	NULL
SYTL4	94121	genome.wustl.edu	37	X	99936234	99936234	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129896.2	-1	reviewed	p.D516	1.000	133	0%	56	33.9%	6	0%	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SYTL4	94121	genome.wustl.edu	37	X	99956565	99956565	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129896.2	-1	reviewed	p.R72H	0.471	49	0%	42	35.7%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_RPH3A_effector,superfamily_FYVE/PHD zinc finger
SYTL4	94121	genome.wustl.edu	37	X	99957105	99957105	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129896.2	-1	reviewed	e1-2	0.966	69	0%	52	15.4%	0	-	-	-	-	-
CSTF2	1478	genome.wustl.edu	37	X	100087826	100087826	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001325.2	+1	reviewed	p.E379K	0.999	36	0%	27	44.4%	10	0%	possibly_damaging(0.46)	deleterious(0.01)	deleterious(0.556)	NULL
NOX1	27035	genome.wustl.edu	37	X	100106314	100106314	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007052.4	-1	reviewed	p.S269P	1.000	105	0%	55	43.6%	0	-	possibly_damaging(0.803)	deleterious(0)	deleterious(0.747)	NULL
NOX1	27035	genome.wustl.edu	37	X	100117188	100117188	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007052.4	-1	reviewed	p.R259H	0.000	116	0%	77	35.1%	0	-	benign(0.002)	tolerated(0.13)	neutral(0.253)	NULL
TRMT2B	79979	genome.wustl.edu	37	X	100276156	100276156	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024917.5	-1	reviewed	p.R334W	0.003	112	0%	56	50%	5	0%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
CENPI	2491	genome.wustl.edu	37	X	100400145	100400145	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006733.2	+1	reviewed	p.N553S	0.431	346	0%	150	41.3%	0	-	benign(0)	tolerated(0.65)	neutral(0.003)	NULL
TAF7L	54457	genome.wustl.edu	37	X	100531365	100531365	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024885.3	-1	reviewed	p.L367	0.825	484	0%	265	39.2%	1	0%	-	-	-	NULL
BTK	695	genome.wustl.edu	37	X	100617556	100617556	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000061.2	-1	reviewed	p.R171S	1.000	135	0%	77	48.1%	2	0%	unknown(0)	tolerated(0.42)	-	HMMPfam_BTK,HMMSmart_BTK
GLA	2717	genome.wustl.edu	37	X	100653431	100653431	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000169.2	-1	reviewed	p.A309V	0.188	162	0%	85	32.9%	69	0%	benign(0.349)	tolerated(0.27)	neutral(0.144)	superfamily_(Trans)glycosidases
GLA	2717	genome.wustl.edu	37	X	100662732	100662732	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000169.2	-1	reviewed	p.L54I	0.274	67	0%	38	57.9%	33	90.9%	benign(0)	tolerated(1)	-	superfamily_(Trans)glycosidases
LOC653354	653354	genome.wustl.edu	37	X	100852704	100852704	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_001717888.2	+1	model	p.A86	0.000	110	0%	81	28.4%	24	0%	-	-	-	HMMPfam_DUF634
GPRASP1	9737	genome.wustl.edu	37	X	101909731	101909731	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099410.1	+1	reviewed	p.S297Y	0.990	135	0%	72	43.1%	1	0%	possibly_damaging(0.947)	deleterious(0.01)	deleterious(0.796)	NULL
GPRASP1	9737	genome.wustl.edu	37	X	101910539	101910539	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099410.1	+1	reviewed	p.I566	0.000	60	3.3%	42	38.1%	0	-	-	-	-	NULL
BHLHB9	80823	genome.wustl.edu	37	X	102004250	102004250	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001142524.1	+1	validated	p.A109	0.004	61	0%	47	12.8%	3	0%	-	-	-	NULL
RAB40AL	282808	genome.wustl.edu	37	X	102192977	102192977	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031834.1	+1	reviewed	p.T244I	0.981	173	0%	153	35.9%	1	0%	benign(0)	tolerated(0.07)	neutral(0.319)	NULL
BEX1	55859	genome.wustl.edu	37	X	102317997	102317997	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018476.3	-1	validated	p.R69M	0.482	230	0%	186	44.1%	8	100%	possibly_damaging(0.659)	deleterious(0.01)	deleterious(0.638)	HMMPfam_BEX
NXF3	56000	genome.wustl.edu	37	X	102335123	102335123	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022052.1	-1	reviewed	p.A317T	0.000	122	0%	74	40.5%	0	-	benign(0.005)	tolerated(0.06)	neutral(0.323)	NULL
BEX4	56271	genome.wustl.edu	37	X	102471242	102471242	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080425.2	+1	validated	p.R54Q	0.000	69	0%	52	51.9%	35	94.2%	probably_damaging(0.954)	tolerated(0.39)	neutral(0.414)	HMMPfam_BEX
TCEAL8	90843	genome.wustl.edu	37	X	102508568	102508568	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006684.1	-1	reviewed	p.C114R	1.000	325	0%	168	46.4%	39	94.8%	possibly_damaging(0.882)	deleterious(0)	deleterious(0.789)	NULL
TCEAL8	90843	genome.wustl.edu	37	X	102508857	102508857	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001006684.1	-1	reviewed	p.K17N	0.947	280	0%	178	40.4%	60	91.6%	benign(0.261)	deleterious(0)	deleterious(0.472)	HMMPfam_TFA
TCEAL5	340543	genome.wustl.edu	37	X	102528912	102528912	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012979.2	-1	validated	p.G194C	0.014	285	0%	227	50.7%	0	-	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	NULL
TCEAL5	340543	genome.wustl.edu	37	X	102529416	102529416	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001012979.2	-1	validated	p.D26N	0.021	463	0%	293	39.9%	0	-	possibly_damaging(0.54)	tolerated(0.25)	neutral(0.220)	HMMPfam_TFA
RAB40A	142684	genome.wustl.edu	37	X	102755390	102755390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080879.2	-1	reviewed	p.R99C	1.000	119	0%	122	38.5%	0	-	benign(0.068)	deleterious(0)	neutral(0.449)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
ENSG00000245920	0	genome.wustl.edu	37	X	102931087	102931087	+	RNA	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000501276	+1	known	NULL	1.000	84	0%	48	43.8%	142	94.3%	-	-	-	-
GLRA4	441509	genome.wustl.edu	37	X	102979163	102979163	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001024452.2	-1	validated	p.P113T	1.000	80	0%	67	28.4%	0	-	benign(0.024)	tolerated(0.27)	neutral(0.035)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
TMSB15B	286527	genome.wustl.edu	37	X	103219128	103219128	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194324.2	+1	validated	p.E11D	1.000	610	0%	280	39.6%	7	0%	-	-	-	HMMPfam_Thymosin,HMMSmart_SM00152
ZCCHC18	644353	genome.wustl.edu	37	X	103358878	103358878	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001143978.1	+1	provisional	p.L26	0.013	112	0%	59	47.5%	0	-	-	-	-	NULL
IL1RAPL2	26280	genome.wustl.edu	37	X	104440223	104440223	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017416.1	+1	reviewed	p.R50Q	1.000	200	0%	98	59.2%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMSmart_SM00409,superfamily_Immunoglobulin
NRK	203447	genome.wustl.edu	37	X	105153847	105153847	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198465.2	+1	validated	p.H738	0.679	50	0%	16	62.5%	0	-	-	-	-	superfamily_p53-like transcription factors
NRK	203447	genome.wustl.edu	37	X	105179182	105179182	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198465.2	+1	validated	p.V1174L	0.044	464	0%	198	49%	0	-	benign(0.055)	tolerated(0.51)	neutral(0.012)	NULL
NRK	203447	genome.wustl.edu	37	X	105179243	105179243	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198465.2	+1	validated	p.P1194H	0.000	645	0%	266	36.8%	0	-	benign(0.293)	deleterious(0)	deleterious(0.535)	NULL
CXorf57	55086	genome.wustl.edu	37	X	105855315	105855315	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018015.5	+1	validated	p.S2Y	0.758	11	0%	11	63.6%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
CXorf57	55086	genome.wustl.edu	37	X	105855550	105855550	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018015.5	+1	validated	p.E80D	0.883	37	0%	31	32.3%	0	-	possibly_damaging(0.942)	tolerated(0.61)	neutral(0.391)	NULL
CXorf57	55086	genome.wustl.edu	37	X	105879861	105879861	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018015.5	+1	validated	p.S464R	0.020	387	0%	186	38.2%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
CXorf57	55086	genome.wustl.edu	37	X	105881006	105881006	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018015.5	+1	validated	p.P475	0.057	157	0%	92	43.5%	0	-	-	-	-	NULL
RNF128	79589	genome.wustl.edu	37	X	105937374	105937374	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024539.3	+1	reviewed	p.T48A	0.012	261	0%	88	34.1%	0	-	benign(0)	tolerated(0.58)	neutral(0.005)	superfamily_SSF52025
TBC1D8B	54885	genome.wustl.edu	37	X	106070528	106070528	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017752.2	+1	validated	p.C388	0.877	106	0.9%	26	38.5%	3	100%	-	-	-	NULL
MORC4	79710	genome.wustl.edu	37	X	106198295	106198295	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024657.4	-1	reviewed	p.I511	0.037	501	0%	177	41.8%	10	0%	-	-	-	NULL
MORC4	79710	genome.wustl.edu	37	X	106228330	106228330	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024657.4	-1	reviewed	p.R224C	1.000	136	0%	62	50%	6	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ATP_bd_ATPase
RBM41	55285	genome.wustl.edu	37	X	106310806	106310806	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018301.3	-1	validated	p.S398Y	0.049	515	0%	208	53.8%	1	100%	benign(0.09)	deleterious(0.03)	neutral(0.371)	NULL
NUP62CL	54830	genome.wustl.edu	37	X	106396717	106396717	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000432145	-1	known	p.W52*	0.345	326	0%	146	41.1%	2	0%	benign(0.084)	tolerated(1)	neutral(0.006)	HMMPfam_Nsp1_C
FRMPD3	84443	genome.wustl.edu	37	X	106844485	106844485	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_042978.6	+1	model	p.S1105	0.013	91	0%	24	16.7%	0	-	-	-	-	NULL
PRPS1	5631	genome.wustl.edu	37	X	106882703	106882703	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002764.3	+1	reviewed	p.D101Y	1.000	148	0%	120	40.8%	27	0%	possibly_damaging(0.47)	deleterious(0.01)	deleterious(0.560)	superfamily_PRTase-like
TSC22D3	1831	genome.wustl.edu	37	X	106959998	106959998	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004089.3	-1	reviewed	p.Y15C	1.000	54	0%	50	34%	11	81.8%	benign(0.009)	tolerated(0.16)	neutral(0.060)	NULL
TSC22D3	1831	genome.wustl.edu	37	X	107018548	107018548	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_198057.2	-1	reviewed	p.S34	0.123	23	0%	31	48.4%	1	0%	-	-	-	NULL
MID2	11043	genome.wustl.edu	37	X	107148759	107148759	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012216.3	+1	reviewed	p.L326I	1.000	156	0%	59	33.9%	3	0%	possibly_damaging(0.942)	tolerated(0.62)	neutral(0.391)	HMMSmart_SM00502
TEX13B	56156	genome.wustl.edu	37	X	107224435	107224435	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031273.2	-1	reviewed	p.L272F	0.939	101	0%	77	36.4%	0	-	unknown(0)	deleterious(0)	-	NULL
COL4A6	1288	genome.wustl.edu	37	X	107412770	107412770	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001847.2	-1	reviewed	p.G1217R	0.619	28	0%	22	36.4%	2	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Collagen
ENSG00000189372	0	genome.wustl.edu	37	X	107626994	107626994	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000453808	+1	known	p.V83A	0.017	88	0%	24	20.8%	0	-	benign(0.181)	tolerated(0.55)	neutral(0.024)	HMMPfam_PLAT,HMMSmart_SM00308,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)
COL4A5	1287	genome.wustl.edu	37	X	107838758	107838758	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033380.1	+1	reviewed	p.C481*	1.000	112	0%	49	53.1%	7	0%	-	-	-	NULL
COL4A5	1287	genome.wustl.edu	37	X	107866026	107866026	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033380.1	+1	reviewed	p.K963T	1.000	69	0%	29	24.1%	12	0%	possibly_damaging(0.763)	tolerated(0.1)	deleterious(0.569)	NULL
IRS4	8471	genome.wustl.edu	37	X	107975811	107975811	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003604.2	-1	reviewed	p.R1255I	0.996	172	0%	101	51.5%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
IRS4	8471	genome.wustl.edu	37	X	107976972	107976972	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003604.2	-1	reviewed	p.G868E	0.006	248	0%	151	47%	1	100%	benign(0.366)	tolerated(0.25)	neutral(0.153)	NULL
IRS4	8471	genome.wustl.edu	37	X	107978705	107978705	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003604.2	-1	reviewed	p.Q290	1.000	24	0%	26	53.8%	0	-	-	-	-	HMMPfam_IRS,HMMSmart_PTBI,superfamily_SSF50729
GUCY2F	2986	genome.wustl.edu	37	X	108625435	108625435	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001522.2	-1	reviewed	p.R1021H	1.000	164	0%	34	55.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
GUCY2F	2986	genome.wustl.edu	37	X	108652341	108652341	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001522.2	-1	reviewed	p.S616	0.712	249	0%	96	47.9%	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
NXT2	55916	genome.wustl.edu	37	X	108784716	108784716	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018698.3	+1	provisional	p.L94	1.000	360	0%	157	36.9%	6	0%	-	-	-	HMMPfam_NTF2,superfamily_SSF54427
ACSL4	2182	genome.wustl.edu	37	X	108912313	108912313	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000514500	-1	known	p.I9T	1.000	511	0%	278	45.7%	7	0%	-	-	-	NULL
ACSL4	2182	genome.wustl.edu	37	X	108921509	108921509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022977.2	-1	reviewed	p.R305I	0.998	118	0%	60	40%	8	50%	probably_damaging(0.999)	tolerated(0.42)	deleterious(0.504)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSL4	2182	genome.wustl.edu	37	X	108926520	108926520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022977.2	-1	reviewed	p.D66N	1.000	433	0%	164	47%	5	60%	benign(0.02)	tolerated(0.21)	neutral(0.045)	NULL
RGAG1	57529	genome.wustl.edu	37	X	109694307	109694307	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020769.2	+1	validated	p.T154	0.397	44	2.3%	34	58.8%	0	-	-	-	-	NULL
RGAG1	57529	genome.wustl.edu	37	X	109695632	109695632	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020769.2	+1	validated	p.T596I	0.189	51	0%	35	31.4%	0	-	possibly_damaging(0.663)	tolerated(0.16)	neutral(0.294)	NULL
PAK3	5063	genome.wustl.edu	37	X	110406904	110406904	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001128168.1	+1	reviewed	p.R275W	1.000	357	0.6%	115	42.6%	1	100%	possibly_damaging(0.95)	deleterious(0)	deleterious(0.838)	NULL
CAPN6	827	genome.wustl.edu	37	X	110494311	110494311	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014289.3	-1	reviewed	p.C331Y	1.000	118	0%	78	11.5%	79	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Peptidase_C2,HMMSmart_CysPc,superfamily_SSF54001
DCX	1641	genome.wustl.edu	37	X	110653577	110653577	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000555.2	-1	reviewed	p.N98S	1.000	78	0%	46	39.1%	0	-	benign(0.002)	tolerated(0.69)	neutral(0.002)	NULL
DCX	1641	genome.wustl.edu	37	X	110654011	110654011	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000358070	-1	known	p.R56Q	0.997	222	0%	82	34.1%	0	-	-	-	-	NULL
ALG13	79868	genome.wustl.edu	37	X	110956461	110956461	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000394780	+1	known	p.F314S	1.000	905	0%	356	37.6%	0	-	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	HMMPfam_OTU,superfamily_SSF54001
TRPC5	7224	genome.wustl.edu	37	X	111019924	111019924	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012471.2	-1	reviewed	p.L847F	1.000	143	0%	48	41.7%	0	-	benign(0.18)	deleterious(0.01)	neutral(0.422)	NULL
TRPC5	7224	genome.wustl.edu	37	X	111025182	111025182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012471.2	-1	reviewed	p.R694H	0.423	162	0%	85	41.2%	0	-	benign(0)	tolerated(0.34)	neutral(0.023)	NULL
TRPC5	7224	genome.wustl.edu	37	X	111090573	111090573	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012471.2	-1	reviewed	p.S490L	1.000	113	0%	51	29.4%	0	-	probably_damaging(0.989)	tolerated(0.32)	neutral(0.464)	HMMPfam_Ion_trans
ZCCHC16	340595	genome.wustl.edu	37	X	111698678	111698678	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004308.2	+1	validated	p.H241R	0.001	66	0%	41	24.4%	0	-	possibly_damaging(0.846)	tolerated(0.36)	neutral(0.345)	NULL
AMOT	154796	genome.wustl.edu	37	X	112058929	112058929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113490.1	-1	reviewed	p.P350L	0.954	56	0%	38	39.5%	4	0%	benign(0.305)	tolerated(1)	neutral(0.095)	NULL
AMOT	154796	genome.wustl.edu	37	X	112065919	112065919	+	Missense_Mutation	SNP	G	G	A	rs180687453	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113490.1	-1	reviewed	p.R146C	0.999	97	0%	35	57.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AMOT	154796	genome.wustl.edu	37	X	112066060	112066060	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001113490.1	-1	reviewed	p.R99*	0.031	41	0%	19	47.4%	2	0%	-	-	-	NULL
LOC286528	286528	genome.wustl.edu	37	X	113625336	113625336	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_210501.3	+1	model	p.T70	0.221	34	0%	26	38.5%	0	-	-	-	-	HMMPfam_Ssu72
LRCH2	57631	genome.wustl.edu	37	X	114357648	114357648	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020871.3	-1	validated	p.R653C	1.000	318	0%	134	41.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology
PLS3	5358	genome.wustl.edu	37	X	114877646	114877646	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001136025.3	+1	reviewed	p.A337S	1.000	143	0%	72	16.7%	85	52.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
SLC6A14	11254	genome.wustl.edu	37	X	115586189	115586189	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007231.3	+1	reviewed	p.W484L	1.000	518	0%	200	42%	6	100%	benign(0.078)	tolerated(0.18)	neutral(0.061)	HMMPfam_SNF
LOC653155	653155	genome.wustl.edu	37	X	115882506	115882506	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_926254.3	-1	model	p.K110Q	1.000	104	0%	25	44%	0	-	-	-	-	NULL
KLHL13	90293	genome.wustl.edu	37	X	117044002	117044002	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_033495.3	-1	reviewed	p.E210K	1.000	62	0%	24	41.7%	6	100%	benign(0.041)	tolerated(0.4)	neutral(0.018)	HMMPfam_BACK
WDR44	54521	genome.wustl.edu	37	X	117521351	117521351	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_019045.4	+1	reviewed	p.E54*	1.000	455	0.2%	150	31.3%	2	0%	-	-	-	NULL
WDR44	54521	genome.wustl.edu	37	X	117577606	117577606	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000371848	+1	known	p.Y722*	1.000	475	0%	212	41%	8	0%	probably_damaging(0.99)	tolerated(0.12)	deleterious(0.702)	superfamily_WD40 repeat-like
DOCK11	139818	genome.wustl.edu	37	X	117702123	117702123	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144658.3	+1	validated	p.Q345K	1.000	406	0%	119	33.6%	1	0%	benign(0.004)	tolerated(0.52)	neutral(0.009)	NULL
DOCK11	139818	genome.wustl.edu	37	X	117732000	117732000	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144658.3	+1	validated	p.N798S	0.244	341	0%	92	50%	2	0%	benign(0)	deleterious(0.04)	neutral(0.349)	NULL
DOCK11	139818	genome.wustl.edu	37	X	117772073	117772073	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144658.3	+1	validated	p.G1328	0.948	764	0%	271	40.6%	2	0%	-	-	-	NULL
DOCK11	139818	genome.wustl.edu	37	X	117773528	117773528	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144658.3	+1	validated	p.T1378A	1.000	52	0%	33	51.5%	1	100%	benign(0.218)	tolerated(0.06)	neutral(0.344)	NULL
IL13RA1	3597	genome.wustl.edu	37	X	117875096	117875096	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001560.2	+1	reviewed	p.H69N	0.514	222	0%	83	37.3%	9	0%	possibly_damaging(0.658)	tolerated(0.21)	neutral(0.277)	NULL
IL13RA1	3597	genome.wustl.edu	37	X	117895151	117895151	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001560.2	+1	reviewed	p.L243I	0.003	371	0%	169	46.2%	18	83.3%	possibly_damaging(0.606)	tolerated(0.22)	neutral(0.252)	superfamily_Fibronectin type III
LONRF3	79836	genome.wustl.edu	37	X	118145877	118145877	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000439603	+1	known	p.*350Q	0.486	270	0%	133	42.1%	8	0%	-	-	-	HMMPfam_LON,HMMSmart_SM00464
LONRF3	79836	genome.wustl.edu	37	X	118148308	118148308	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001031855.1	+1	reviewed	p.A705T	0.692	254	0%	120	46.7%	15	100%	benign(0.045)	tolerated(0.5)	neutral(0.013)	HMMPfam_LON,HMMSmart_SM00464
KIAA1210	57481	genome.wustl.edu	37	X	118221535	118221535	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020721.1	-1	validated	p.L1220M	0.000	86	0%	39	41%	0	-	possibly_damaging(0.91)	-	-	NULL
KIAA1210	57481	genome.wustl.edu	37	X	118250478	118250478	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020721.1	-1	validated	p.N211D	0.000	306	0%	194	33%	0	-	benign(0.02)	-	-	NULL
CXorf56	63932	genome.wustl.edu	37	X	118694251	118694251	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_022101.3	-1	validated	p.E74D	1.000	205	0%	133	48.1%	23	95.6%	benign(0)	tolerated(0.76)	neutral(0.001)	NULL
UBE2A	7319	genome.wustl.edu	37	X	118717176	118717176	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003336.2	+1	reviewed	p.K139	1.000	259	0%	115	14.8%	72	0%	-	-	-	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
NKRF	55922	genome.wustl.edu	37	X	118723673	118723673	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017544.3	-1	reviewed	p.S572F	0.994	184	0%	112	37.5%	11	0%	benign(0.283)	deleterious(0.01)	deleterious(0.493)	HMMPfam_G-patch,HMMSmart_SM00443
UPF3B	65109	genome.wustl.edu	37	X	118985769	118985769	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_080632.1	-1	reviewed	p.P75L	0.999	168	0%	88	23.9%	8	37.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Smg4_UPF3,superfamily_RNA-binding domain RBD
RNF113A	7737	genome.wustl.edu	37	X	119004938	119004938	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006978.2	-1	reviewed	p.F213	1.000	70	0%	58	51.7%	33	3%	-	-	-	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,superfamily_SSF90229
RNF113A	7737	genome.wustl.edu	37	X	119005480	119005480	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006978.2	-1	reviewed	p.R33C	1.000	53	0%	45	55.6%	22	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
RHOXF1	158800	genome.wustl.edu	37	X	119249468	119249468	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_139282.1	-1	provisional	p.Q102R	0.000	14	0%	18	50%	0	-	benign(0.011)	tolerated(0.2)	neutral(0.050)	superfamily_Homeodomain_like
ZBTB33	10009	genome.wustl.edu	37	X	119387926	119387926	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006777.3	+1	reviewed	p.S219Y	0.995	94	0%	71	23.9%	11	0%	benign(0.001)	tolerated(0.11)	neutral(0.272)	NULL
ZBTB33	10009	genome.wustl.edu	37	X	119388879	119388879	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006777.3	+1	reviewed	p.R537C	1.000	135	0%	66	45.5%	8	87.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LAMP2	3920	genome.wustl.edu	37	X	119575685	119575685	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001122606.1	-1	reviewed	p.C331*	1.000	189	0%	101	34.7%	99	0%	-	-	-	HMMPfam_Lamp
MCTS1	28985	genome.wustl.edu	37	X	119738719	119738719	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001137554.1	+1	validated	p.G4E	1.000	300	0%	105	35.2%	1	0%	benign(0.017)	tolerated(0.32)	neutral(0.025)	NULL
CT47B1	643311	genome.wustl.edu	37	X	120008796	120008796	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001145718.1	-1	validated	p.E243	0.000	57	0%	77	37.7%	0	-	-	-	-	NULL
GLUD2	2747	genome.wustl.edu	37	X	120182820	120182820	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_012084.3	+1	reviewed	p.L428I	1.000	293	0%	200	41.5%	2	50%	benign(0.022)	deleterious(0.05)	neutral(0.346)	HMMPfam_ELFV_dehydrog,superfamily_NAD(P)-bd
THOC2	57187	genome.wustl.edu	37	X	122758037	122758037	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000438358	-1	known	p.W137R	1.000	408	0%	132	50.8%	24	100%	-	-	-	NULL
THOC2	57187	genome.wustl.edu	37	X	122759917	122759917	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081550.1	-1	validated	p.S968F	1.000	262	0%	103	21.4%	14	0%	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	NULL
THOC2	57187	genome.wustl.edu	37	X	122778708	122778708	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081550.1	-1	validated	p.S494Y	1.000	267	0%	131	13%	9	22.2%	possibly_damaging(0.77)	deleterious(0)	deleterious(0.730)	NULL
STAG2	10735	genome.wustl.edu	37	X	123185062	123185062	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042749.1	+1	validated	p.R370Q	1.000	148	0%	56	46.4%	8	87.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_ARM-type_fold
SH2D1A	4068	genome.wustl.edu	37	X	123504128	123504128	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002351.4	+1	reviewed	p.V102I	1.000	328	0%	96	16.7%	0	-	probably_damaging(0.992)	tolerated(0.27)	deleterious(0.481)	superfamily_SH2 domain
ODZ1	10178	genome.wustl.edu	37	X	123518505	123518505	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014253.3	-1	reviewed	p.Y2085	0.408	336	0%	113	40.7%	1	0%	-	-	-	NULL
ODZ1	10178	genome.wustl.edu	37	X	123526110	123526110	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014253.3	-1	reviewed	p.R1820Q	1.000	339	0.3%	123	43.9%	2	0%	probably_damaging(0.999)	tolerated(0.12)	deleterious(0.751)	NULL
DCAF12L2	340578	genome.wustl.edu	37	X	125298551	125298551	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013628.2	-1	reviewed	p.G453C	1.000	41	0%	56	46.4%	0	-	possibly_damaging(0.951)	deleterious(0.03)	deleterious(0.758)	NULL
DCAF12L2	340578	genome.wustl.edu	37	X	125299114	125299114	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001013628.2	-1	reviewed	p.V265A	0.942	11	0%	12	50%	1	0%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	HMMSmart_WD40,superfamily_WD40_like
ACTRT1	139741	genome.wustl.edu	37	X	127185453	127185453	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_138289.3	-1	reviewed	p.D245Y	1.000	62	0%	28	21.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
SMARCA1	6594	genome.wustl.edu	37	X	128605189	128605189	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003069.3	-1	reviewed	p.L853V	1.000	753	0%	229	37.6%	2	0%	probably_damaging(0.999)	tolerated(0.23)	deleterious(0.532)	HMMPfam_HAND,superfamily_HAND domain of the nucleosome remodeling ATPase ISWI,superfamily_P-loop containing nucleoside triphosphate hydrolases
SMARCA1	6594	genome.wustl.edu	37	X	128631828	128631828	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003069.3	-1	reviewed	p.E500*	1.000	269	0%	93	47.3%	3	33.3%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
OCRL	4952	genome.wustl.edu	37	X	128696373	128696373	+	Missense_Mutation	SNP	C	C	T	rs137853263	byCluster	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000276.3	+1	reviewed	p.R318C	1.000	250	0%	121	49.6%	6	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like
OCRL	4952	genome.wustl.edu	37	X	128724192	128724192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000276.3	+1	reviewed	p.R884H	1.000	291	0.3%	151	42.4%	7	100%	benign(0.145)	deleterious(0.03)	neutral(0.377)	HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ZDHHC9	51114	genome.wustl.edu	37	X	128946705	128946705	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001008222.2	-1	reviewed	p.T256A	1.000	146	0%	68	41.2%	27	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
ZDHHC9	51114	genome.wustl.edu	37	X	128946757	128946757	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000433917	-1	known	p.P152L	0.963	171	0%	86	32.6%	29	100%	-	-	-	NULL
BCORL1	63035	genome.wustl.edu	37	X	129173245	129173245	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021946.3	+1	reviewed	p.R1536C	1.000	23	0%	18	38.9%	17	100%	possibly_damaging(0.477)	deleterious(0.04)	deleterious(0.506)	NULL
ELF4	2000	genome.wustl.edu	37	X	129206335	129206335	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001127197.1	-1	reviewed	p.N133S	0.976	183	0%	133	47.4%	9	0%	benign(0.098)	tolerated(0.49)	neutral(0.018)	NULL
AIFM1	9131	genome.wustl.edu	37	X	129264058	129264058	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004208.3	-1	reviewed	p.A553T	0.036	65	0%	55	50.9%	91	93.4%	benign(0)	tolerated(0.46)	neutral(0.012)	superfamily_FAD/NAD-linked reductases dimerisation (C-terminal) domain
GPR119	139760	genome.wustl.edu	37	X	129518660	129518660	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178471.2	-1	reviewed	p.C254	0.828	27	0%	35	34.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
GPR119	139760	genome.wustl.edu	37	X	129518863	129518863	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_178471.2	-1	reviewed	p.D187N	0.999	39	0%	39	33.3%	0	-	probably_damaging(0.995)	tolerated(0.23)	deleterious(0.499)	HMMPfam_7tm_1,superfamily_SSF81321
RBMX2	51634	genome.wustl.edu	37	X	129536329	129536329	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016024.2	+1	validated	p.A36T	1.000	28	0%	34	64.7%	15	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_RNA-binding domain RBD
RBMX2	51634	genome.wustl.edu	37	X	129546623	129546623	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_016024.2	+1	validated	p.R257M	0.999	96	0%	42	47.6%	34	0%	possibly_damaging(0.528)	tolerated(0.09)	deleterious(0.474)	NULL
ARHGAP36	158763	genome.wustl.edu	37	X	130217717	130217717	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_144967.3	+1	validated	p.H110R	0.502	40	2.5%	44	34.1%	0	-	benign(0)	tolerated(0.84)	neutral(0.001)	NULL
IGSF1	3547	genome.wustl.edu	37	X	130408127	130408127	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001555.4	-1	reviewed	p.V1269M	0.992	200	0%	117	47.9%	0	-	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
IGSF1	3547	genome.wustl.edu	37	X	130409131	130409131	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001555.4	-1	reviewed	p.E1105G	0.018	93	0%	62	45.2%	0	-	benign(0.053)	tolerated(0.38)	neutral(0.021)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
IGSF1	3547	genome.wustl.edu	37	X	130415767	130415767	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001555.4	-1	reviewed	p.N466	0.906	175	0%	104	39.4%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
IGSF1	3547	genome.wustl.edu	37	X	130417063	130417063	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001555.4	-1	reviewed	p.F281	0.993	361	0%	143	46.2%	0	-	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
OR13H1	347468	genome.wustl.edu	37	X	130678185	130678185	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001004486.1	+1	provisional	p.I46	0.061	230	0%	134	39.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
FRMD7	90167	genome.wustl.edu	37	X	131212265	131212265	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_194277.2	-1	reviewed	p.S594T	1.000	213	0%	57	47.4%	0	-	probably_damaging(0.955)	tolerated(0.08)	deleterious(0.699)	NULL
MBNL3	55796	genome.wustl.edu	37	X	131516289	131516289	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018388.3	-1	reviewed	p.H324Y	1.000	58	0%	35	22.9%	2	0%	possibly_damaging(0.902)	tolerated(0.13)	deleterious(0.609)	NULL
MBNL3	55796	genome.wustl.edu	37	X	131520694	131520694	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018388.3	-1	reviewed	p.P306L	1.000	128	0%	48	50%	3	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
HS6ST2	90161	genome.wustl.edu	37	X	131842517	131842517	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001077188.1	-1	reviewed	p.R318M	1.000	412	0%	113	44.2%	0	-	possibly_damaging(0.706)	deleterious(0.01)	deleterious(0.659)	HMMPfam_HS6ST
USP26	83844	genome.wustl.edu	37	X	132160874	132160874	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031907.1	-1	reviewed	p.E459*	0.068	77	0%	29	44.8%	0	-	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
USP26	83844	genome.wustl.edu	37	X	132161431	132161431	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031907.1	-1	reviewed	p.S273I	0.000	139	0%	36	55.6%	0	-	benign(0.206)	tolerated(0.1)	neutral(0.306)	NULL
USP26	83844	genome.wustl.edu	37	X	132161834	132161834	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_031907.1	-1	reviewed	p.S139P	0.000	148	0%	48	12.5%	0	-	benign(0.001)	tolerated(0.33)	neutral(0.024)	NULL
GPC4	2239	genome.wustl.edu	37	X	132440052	132440052	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001448.2	-1	reviewed	p.K336N	1.000	146	0.7%	67	19.4%	32	0%	possibly_damaging(0.631)	deleterious(0)	deleterious(0.665)	HMMPfam_Glypican
MIR450A1	554214	genome.wustl.edu	37	X	133674414	133674414	+	RNA	SNP	T	T	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000362262	-1	known	NULL	0.972	613	0%	346	45.1%	0	-	-	-	-	-
PLAC1	10761	genome.wustl.edu	37	X	133700329	133700329	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_021796.3	-1	provisional	p.C128*	0.000	71	0%	42	21.4%	0	-	-	-	-	NULL
ENSG00000184785	0	genome.wustl.edu	37	X	134125112	134125112	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000330288	+1	known	p.S74N	0.002	11	0%	14	64.3%	0	-	-	-	-	NULL
LOC728470	728470	genome.wustl.edu	37	X	134315071	134315071	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343844.1	-1	model	p.A179	0.038	52	0%	13	61.5%	0	-	-	-	-	NULL
ZNF75D	7626	genome.wustl.edu	37	X	134421702	134421702	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007131.3	-1	reviewed	p.C300	0.000	485	0%	180	43.9%	2	100%	-	-	-	NULL
ZNF449	203523	genome.wustl.edu	37	X	134494957	134494957	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152695.5	+1	reviewed	p.G505S	0.971	144	0%	48	33.3%	4	0%	probably_damaging(0.998)	tolerated(0.49)	deleterious(0.485)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
DDX26B	203522	genome.wustl.edu	37	X	134679384	134679384	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_182540.4	+1	validated	p.E76K	1.000	262	0%	83	45.8%	0	-	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	superfamily_vWA-like
LOC644717	644717	genome.wustl.edu	37	X	134774776	134774776	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	XM_002343850.1	-1	model	p.T730	0.000	58	0%	21	33.3%	0	-	-	-	-	NULL
SAGE1	55511	genome.wustl.edu	37	X	134983792	134983792	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018666.2	+1	reviewed	p.K54N	0.000	375	0%	185	44.3%	2	100%	possibly_damaging(0.918)	tolerated(0.2)	neutral(0.417)	NULL
SAGE1	55511	genome.wustl.edu	37	X	134993359	134993359	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018666.2	+1	reviewed	p.A672T	0.000	95	0%	62	50%	16	0%	benign(0)	tolerated(0.33)	neutral(0.024)	NULL
SAGE1	55511	genome.wustl.edu	37	X	134994489	134994489	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018666.2	+1	reviewed	p.R844I	0.993	172	0%	52	21.2%	2	0%	possibly_damaging(0.628)	deleterious(0.01)	deleterious(0.625)	NULL
SLC9A6	10479	genome.wustl.edu	37	X	135098895	135098895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001042537.1	+1	reviewed	p.P443L	1.000	471	0.2%	206	43.2%	8	0%	probably_damaging(1)	tolerated(1)	deleterious(0.500)	HMMPfam_Na_H_Exchanger
MAP7D3	79649	genome.wustl.edu	37	X	135313873	135313873	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024597.3	-1	reviewed	p.E415K	0.000	53	0%	37	51.4%	3	66.6%	benign(0.096)	deleterious(0.01)	neutral(0.413)	NULL
MAP7D3	79649	genome.wustl.edu	37	X	135322580	135322580	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024597.3	-1	reviewed	p.P201S	0.001	221	0%	99	45.5%	3	0%	benign(0.001)	tolerated(0.82)	neutral(0.001)	NULL
GPR112	139378	genome.wustl.edu	37	X	135426833	135426833	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153834.3	+1	reviewed	p.A323V	0.005	244	0%	75	42.7%	0	-	possibly_damaging(0.535)	tolerated(0.31)	neutral(0.208)	NULL
GPR112	139378	genome.wustl.edu	37	X	135427049	135427049	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153834.3	+1	reviewed	p.S395L	0.000	118	0%	37	51.4%	0	-	possibly_damaging(0.882)	deleterious(0.01)	deleterious(0.750)	NULL
GPR112	139378	genome.wustl.edu	37	X	135432562	135432562	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153834.3	+1	reviewed	p.S2233P	0.000	173	0%	67	14.9%	0	-	probably_damaging(0.989)	tolerated(0.09)	deleterious(0.736)	NULL
GPR112	139378	genome.wustl.edu	37	X	135485424	135485424	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_153834.3	+1	reviewed	p.A2866V	0.291	78	0%	52	46.2%	0	-	benign(0.075)	deleterious(0.04)	neutral(0.354)	HMMPfam_7tm_2
CD40LG	959	genome.wustl.edu	37	X	135736578	135736578	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000074.2	+1	reviewed	p.E112A	0.760	420	0%	99	32.3%	0	-	benign(0.001)	tolerated(0.27)	neutral(0.034)	NULL
ARHGEF6	9459	genome.wustl.edu	37	X	135795499	135795499	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004840.2	-1	reviewed	p.E255*	1.000	347	0%	147	44.9%	0	-	-	-	-	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
ARHGEF6	9459	genome.wustl.edu	37	X	135814323	135814323	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004840.2	-1	reviewed	p.L224I	0.980	195	0%	94	46.8%	1	0%	benign(0.009)	tolerated(0.24)	neutral(0.038)	superfamily_SH3-domain
GPR101	83550	genome.wustl.edu	37	X	136112680	136112680	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_054021.1	-1	validated	p.S385I	0.001	116	0%	100	49%	0	-	possibly_damaging(0.528)	tolerated(0.25)	neutral(0.215)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZIC3	7547	genome.wustl.edu	37	X	136648926	136648926	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003413.3	+1	reviewed	p.E26K	1.000	2	0.000	4	1.000	0	-	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	NULL
ZIC3	7547	genome.wustl.edu	37	X	136649756	136649756	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003413.3	+1	reviewed	p.C302	0.996	10	0%	13	30.8%	2	100%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2
ZIC3	7547	genome.wustl.edu	37	X	136651211	136651211	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003413.3	+1	reviewed	p.R404H	1.000	46	0%	29	27.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
FGF13	2258	genome.wustl.edu	37	X	137793032	137793032	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004114.3	-1	reviewed	p.V45A	1.000	185	0%	173	42.2%	2	0%	benign(0.205)	deleterious(0.01)	neutral(0.426)	NULL
MCF2	4168	genome.wustl.edu	37	X	138664652	138664652	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099855.1	-1	reviewed	p.S979L	0.002	162	0%	34	55.9%	1	0%	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	NULL
MCF2	4168	genome.wustl.edu	37	X	138697171	138697171	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001099855.1	-1	reviewed	p.R471Q	0.967	336	0%	59	50.8%	1	0%	possibly_damaging(0.673)	tolerated(1)	neutral(0.239)	NULL
ATP11C	286410	genome.wustl.edu	37	X	138850445	138850445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173694.4	-1	validated	p.R792W	1.000	296	0%	100	50%	10	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_HAD-like
ATP11C	286410	genome.wustl.edu	37	X	138856925	138856925	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173694.4	-1	validated	p.R717*	1.000	426	0%	163	38%	2	0%	-	-	-	superfamily_HAD-like
ATP11C	286410	genome.wustl.edu	37	X	138864877	138864877	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173694.4	-1	validated	p.R597Q	1.000	205	0%	137	42.3%	9	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N
ATP11C	286410	genome.wustl.edu	37	X	138878611	138878611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173694.4	-1	validated	p.D346N	1.000	127	0%	40	27.5%	1	0%	probably_damaging(1)	tolerated(0.23)	deleterious(0.541)	NULL
CDR1	1038	genome.wustl.edu	37	X	139866205	139866205	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_004065.2	-1	reviewed	p.P109	0.000	229	0%	92	45.7%	1	0%	-	-	-	NULL
MAGEC1	9947	genome.wustl.edu	37	X	140993718	140993718	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005462.4	+1	reviewed	p.V176	0.349	282	0%	151	12.6%	0	-	-	-	-	NULL
MAGEC1	9947	genome.wustl.edu	37	X	140996604	140996604	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005462.4	+1	reviewed	p.S1138R	0.001	57	0%	33	36.4%	0	-	unknown(0)	deleterious(0.01)	-	NULL
SPANXN3	139067	genome.wustl.edu	37	X	142596811	142596811	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009609.2	-1	validated	p.E87K	0.000	573	0%	201	40.3%	0	-	benign(0.094)	deleterious(0)	neutral(0.452)	HMMPfam_SPAN-X
SLITRK4	139065	genome.wustl.edu	37	X	142717037	142717037	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173078.3	-1	reviewed	p.L630I	0.999	114	0%	70	47.1%	1	0%	probably_damaging(0.994)	tolerated(0.21)	deleterious(0.496)	NULL
SLITRK4	139065	genome.wustl.edu	37	X	142718422	142718422	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173078.3	-1	reviewed	p.S168*	1.000	106	0%	64	40.6%	0	-	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
SLITRK4	139065	genome.wustl.edu	37	X	142718835	142718835	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173078.3	-1	reviewed	p.C30*	0.992	72	0%	40	17.5%	1	100%	-	-	-	superfamily_L domain-like
SPANXN2	494119	genome.wustl.edu	37	X	142795342	142795342	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009615.1	-1	provisional	p.D112	0.002	493	0%	268	29.5%	0	-	-	-	-	NULL
SLITRK2	84631	genome.wustl.edu	37	X	144904702	144904702	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144003.2	+1	reviewed	p.D253	1.000	82	0%	55	49.1%	0	-	-	-	-	HMMSmart_SM00082,superfamily_L domain-like
SLITRK2	84631	genome.wustl.edu	37	X	144906465	144906465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001144003.2	+1	reviewed	p.A841V	1.000	52	0%	21	42.9%	1	100%	possibly_damaging(0.762)	tolerated(0.06)	deleterious(0.605)	NULL
FMR1	2332	genome.wustl.edu	37	X	147030296	147030296	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002024.5	+1	reviewed	p.R611C	1.000	148	0.7%	81	51.9%	36	97.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FMR1NB	158521	genome.wustl.edu	37	X	147063095	147063095	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152578.2	+1	validated	p.R58Q	0.000	47	0%	41	56.1%	0	-	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	NULL
FMR1NB	158521	genome.wustl.edu	37	X	147106481	147106481	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_152578.2	+1	validated	p.Q243	0.000	224	0%	102	39.2%	0	-	-	-	-	NULL
MAGEA11	4110	genome.wustl.edu	37	X	148798093	148798093	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005366.4	+1	reviewed	p.I316T	0.018	82	0%	47	51.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MAGE
MAMLD1	10046	genome.wustl.edu	37	X	149639109	149639109	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005491.3	+1	reviewed	p.G422S	0.999	14	0%	20	60%	11	0%	benign(0.003)	tolerated(1)	-	NULL
MAMLD1	10046	genome.wustl.edu	37	X	149678274	149678274	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000432680	+1	known	p.R629W	0.997	302	0%	142	16.2%	8	37.5%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
MTM1	4534	genome.wustl.edu	37	X	149787532	149787532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000252.2	+1	reviewed	p.A122T	1.000	143	0%	57	40.4%	0	-	benign(0.007)	tolerated(0.12)	neutral(0.261)	superfamily_SSF50729
MTM1	4534	genome.wustl.edu	37	X	149831987	149831987	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000252.2	+1	reviewed	p.E517*	1.000	171	0%	71	38%	0	-	-	-	-	superfamily_SSF52799
HMGB3	3149	genome.wustl.edu	37	X	150155746	150155746	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005342.2	+1	validated	p.A146T	1.000	103	0%	77	49.4%	72	0%	benign(0.003)	tolerated(0.06)	neutral(0.323)	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box
PASD1	139135	genome.wustl.edu	37	X	150840783	150840783	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_173493.2	+1	reviewed	p.Q522H	0.004	122	0%	62	50%	0	-	unknown(0)	deleterious(0)	-	NULL
PRRG3	79057	genome.wustl.edu	37	X	150868543	150868543	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_024082.3	+1	validated	p.R28H	0.570	29	0%	29	58.6%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Gla,HMMSmart_GLA,superfamily_VitK_dep_GLA
MAGEA4	4103	genome.wustl.edu	37	X	151092416	151092416	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001011548.1	+1	reviewed	p.E94K	0.000	33	0%	38	44.7%	0	-	benign(0.334)	tolerated(0.11)	neutral(0.377)	NULL
GABRQ	55879	genome.wustl.edu	37	X	151821513	151821513	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_018558.2	+1	reviewed	p.S556	0.000	48	0%	28	35.7%	0	-	-	-	-	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
NSDHL	50814	genome.wustl.edu	37	X	152031182	152031182	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001129765.1	+1	reviewed	p.V153I	0.000	213	0%	129	37.2%	33	0%	benign(0.019)	tolerated(0.52)	neutral(0.010)	HMMPfam_3Beta_HSD,superfamily_NAD(P)-bd
ZNF185	7739	genome.wustl.edu	37	X	152089258	152089258	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_007150.3	+1	reviewed	p.T207A	0.220	55	0%	37	32.4%	14	7.1%	possibly_damaging(0.543)	tolerated(0.12)	neutral(0.445)	NULL
PNMA5	114824	genome.wustl.edu	37	X	152159570	152159570	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001103150.1	-1	validated	p.V191	0.005	33	0%	38	60.5%	0	-	-	-	-	NULL
ZNF275	10838	genome.wustl.edu	37	X	152612644	152612644	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001080485.2	+1	validated	p.A167	0.000	43	0%	51	37.3%	9	0%	-	-	-	NULL
HAUS7	55559	genome.wustl.edu	37	X	152722072	152722072	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_017518.6	-1	reviewed	p.E172K	0.074	26	0%	25	56%	32	90.6%	benign(0.209)	tolerated(0.45)	neutral(0.033)	NULL
ATP2B3	492	genome.wustl.edu	37	X	152823591	152823591	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001001344.2	+1	reviewed	p.A819T	1.000	41	0%	47	44.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M
FAM58A	92002	genome.wustl.edu	37	X	152860036	152860036	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000276345	-1	known	p.R131H	0.999	40	2.5%	22	40.9%	54	0%	benign(0.004)	tolerated(0.11)	neutral(0.272)	superfamily_Cyclin_like
PNCK	139728	genome.wustl.edu	37	X	152936264	152936264	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001039582.3	-1	validated	p.D360N	0.879	43	0%	40	20%	16	37.5%	possibly_damaging(0.784)	tolerated(0.46)	neutral(0.305)	superfamily_Protein kinase-like (PK-like)
ABCD1	215	genome.wustl.edu	37	X	152991292	152991292	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000033.3	+1	reviewed	p.R191C	0.996	14	0%	16	56.2%	9	0%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_ABC_membrane_2
PLXNB3	5365	genome.wustl.edu	37	X	153040000	153040000	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005393.2	+1	reviewed	p.A1268	0.000	6	0.000	10	0.400	4	100%	-	-	-	NULL
PLXNB3	5365	genome.wustl.edu	37	X	153041531	153041531	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005393.2	+1	reviewed	p.G1531C	0.003	9	0.000	9	0.444	5	20%	benign(0.053)	tolerated(0.07)	neutral(0.323)	superfamily_Rho_GAP,HMMPfam_Plexin_cytopl
PLXNB3	5365	genome.wustl.edu	37	X	153043054	153043054	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000448847	+1	known	p.P28L	0.001	19	0%	35	48.6%	10	90%	-	-	-	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
PLXNB3	5365	genome.wustl.edu	37	X	153043531	153043531	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005393.2	+1	reviewed	p.S1797L	0.960	29	0%	25	44%	8	0%	benign(0.19)	deleterious(0.04)	neutral(0.367)	superfamily_Rho_GAP,HMMPfam_Plexin_cytopl
SRPK3	26576	genome.wustl.edu	37	X	153046985	153046985	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000430541	+1	known	p.A86V	0.000	19	0%	29	51.7%	5	0%	-	-	-	superfamily_Protein kinase-like (PK-like)
SRPK3	26576	genome.wustl.edu	37	X	153047601	153047601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_014370.3	+1	reviewed	p.P138L	1.000	67	0%	63	49.2%	7	0%	probably_damaging(0.978)	deleterious(0.04)	deleterious(0.769)	superfamily_Kinase_like,HMMPfam_Pkinase
SSR4	6748	genome.wustl.edu	37	X	153063086	153063086	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	ENST00000447375	+1	known	p.A3V	0.000	10	0%	19	42.1%	0	-	-	-	-	NULL
L1CAM	3897	genome.wustl.edu	37	X	153132186	153132186	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000425.3	-1	reviewed	p.P783	0.690	43	0%	32	37.5%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
L1CAM	3897	genome.wustl.edu	37	X	153133875	153133875	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000425.3	-1	reviewed	p.E529K	0.884	55	0%	51	29.4%	0	-	benign(0)	tolerated(0.06)	neutral(0.323)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
RENBP	5973	genome.wustl.edu	37	X	153209390	153209390	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002910.5	-1	reviewed	p.F82	0.000	28	0%	32	59.4%	9	0%	-	-	-	superfamily_Six-hairpin glycosidases
HCFC1	3054	genome.wustl.edu	37	X	153225785	153225785	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005334.2	-1	reviewed	p.A329T	1.000	22	0%	19	42.1%	28	17.8%	probably_damaging(0.996)	tolerated(0.07)	deleterious(0.780)	superfamily_Galactose oxidase central domain
HCFC1	3054	genome.wustl.edu	37	X	153227717	153227717	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005334.2	-1	reviewed	p.A251	0.005	47	0%	31	51.6%	24	87.5%	-	-	-	superfamily_Galactose oxidase central domain
TMEM187	8269	genome.wustl.edu	37	X	153248131	153248131	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003492.2	+1	reviewed	p.V206	0.992	24	0%	39	35.9%	19	31.5%	-	-	-	NULL
OPN1LW	5956	genome.wustl.edu	37	X	153420106	153420106	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_020061.4	+1	reviewed	p.S212	0.002	66	0%	66	36.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
FLNA	2316	genome.wustl.edu	37	X	153587374	153587374	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001110556.1	-1	reviewed	p.Q1484H	1.000	20	0%	28	39.3%	439	7.5%	benign(0.002)	tolerated(0.09)	neutral(0.296)	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
FLNA	2316	genome.wustl.edu	37	X	153593252	153593252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001110556.1	-1	reviewed	p.G589S	0.997	27	0%	24	41.7%	348	5.4%	benign(0.162)	-	-	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
FLNA	2316	genome.wustl.edu	37	X	153594808	153594808	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001110556.1	-1	reviewed	p.A366T	0.970	33	0%	42	28.6%	274	87.9%	benign(0.019)	tolerated(0.43)	neutral(0.014)	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
FLNA	2316	genome.wustl.edu	37	X	153596403	153596403	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001110556.1	-1	reviewed	p.T143	0.984	43	0%	57	35.1%	323	6.8%	-	-	-	PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
RPL10	6134	genome.wustl.edu	37	X	153627880	153627880	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006013.3	+1	reviewed	p.E45	1.000	193	0%	100	23%	2500	0%	-	-	-	HMMPfam_Ribosomal_L16,superfamily_Ribosomal protein L10e
RPL10	6134	genome.wustl.edu	37	X	153628224	153628224	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006013.3	+1	reviewed	p.L91F	1.000	89	0%	73	31.5%	2405	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Ribosomal_L16,superfamily_Ribosomal protein L10e
DNASE1L1	1774	genome.wustl.edu	37	X	153631121	153631121	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009932.1	-1	reviewed	p.S279N	0.003	18	0%	24	45.8%	20	0%	unknown(0)	tolerated(0.35)	-	NULL
DNASE1L1	1774	genome.wustl.edu	37	X	153631132	153631132	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001009932.1	-1	reviewed	p.S275	0.004	18	0%	25	36%	16	81.2%	-	-	-	NULL
ATP6AP1	537	genome.wustl.edu	37	X	153662667	153662667	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001183.4	+1	reviewed	p.R266	1.000	82	0%	61	37.7%	127	90.5%	-	-	-	HMMPfam_ATP-synt_S1
LAGE3	8270	genome.wustl.edu	37	X	153706365	153706365	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_006014.3	-1	reviewed	p.R117Q	0.000	34	0%	43	60.5%	128	91.4%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_Pcc1
G6PD	2539	genome.wustl.edu	37	X	153762269	153762269	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000402.3	-1	reviewed	p.D281N	1.000	36	0%	40	30%	37	0%	benign(0.205)	deleterious(0.01)	neutral(0.426)	HMMPfam_G6PD_C,superfamily_SSF55347
GAB3	139716	genome.wustl.edu	37	X	153924198	153924198	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081573.1	-1	reviewed	p.I508	1.000	408	0%	157	35.7%	0	-	-	-	-	NULL
GAB3	139716	genome.wustl.edu	37	X	153925442	153925442	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081573.1	-1	reviewed	p.E464	0.322	107	0.9%	38	44.7%	0	-	-	-	-	NULL
GAB3	139716	genome.wustl.edu	37	X	153941542	153941542	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001081573.1	-1	reviewed	p.L179R	0.785	127	0%	76	42.1%	0	-	benign(0.027)	tolerated(0.47)	neutral(0.012)	NULL
MPP1	4354	genome.wustl.edu	37	X	154020090	154020090	+	Silent	SNP	G	G	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002436.3	-1	reviewed	p.S93	0.031	200	0%	110	36.4%	3	0%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
F8	2157	genome.wustl.edu	37	X	154132335	154132335	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000132.3	-1	reviewed	p.L1948	0.360	221	0%	82	54.9%	0	-	-	-	-	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_2
F8	2157	genome.wustl.edu	37	X	154176040	154176040	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000132.3	-1	reviewed	p.V682	1.000	335	0%	199	41.2%	1	0%	-	-	-	superfamily_Cupredoxins
F8	2157	genome.wustl.edu	37	X	154194856	154194856	+	Silent	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_000132.3	-1	reviewed	p.S372	0.210	205	0%	100	38%	0	-	-	-	-	NULL
VBP1	7411	genome.wustl.edu	37	X	154448563	154448563	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_003372.5	+1	reviewed	p.N66S	0.999	114	0%	62	43.5%	38	0%	benign(0.022)	tolerated(0.24)	neutral(0.038)	HMMPfam_Prefoldin,superfamily_Prefoldin
RAB39B	116442	genome.wustl.edu	37	X	154493497	154493497	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_171998.2	-1	reviewed	p.R26H	1.000	20	0%	25	20%	2	0%	benign(0.064)	tolerated(0.15)	neutral(0.245)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
CLIC2	1193	genome.wustl.edu	37	X	154507296	154507296	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001289.4	-1	reviewed	p.R214C	1.000	202	0%	85	30.6%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Glutathione S-transferase (GST) C-terminal domain
CLIC2	1193	genome.wustl.edu	37	X	154508587	154508587	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_001289.4	-1	reviewed	p.R145C	0.999	157	0%	54	44.4%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Glutathione S-transferase (GST) C-terminal domain
SPRY3	10251	genome.wustl.edu	37	X	155003614	155003614	+	Silent	SNP	C	C	T	rs192786119	by1000genomes	TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_005840.1	+1	validated	p.Y27	1.000	156	0%	137	43.8%	4	50%	-	-	-	NULL
IL9R	3581	genome.wustl.edu	37	X	155232664	155232664	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11E-01A-11D-A10M-09	TCGA-B5-A11E-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4be64434-9064-44c8-9391-80788c6e993a	980f8fbb-2c31-45c3-b7be-61a695b82bc3	NM_002186.2	+1	reviewed	p.S41Y	0.014	225	0%	199	12.6%	0	-	possibly_damaging(0.855)	deleterious(0)	deleterious(0.774)	NULL
