Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
MIB2	142678	genome.wustl.edu	37	1	1563170	1563170	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	ENST00000514234	+1	known	p.A421T	0.976	22	0%	22	31.8%	43	27.9%	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
RERE	473	genome.wustl.edu	37	1	8421893	8421893	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001042681.1	-1	reviewed	p.R649H	1.000	185	0%	178	36.5%	16	43.7%	unknown(0)	deleterious(0.05)	-	HMMPfam_Atrophin-1
TMEM201	199953	genome.wustl.edu	37	1	9670791	9670791	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001130924.2	+1	validated	p.G541S	0.128	23	0%	24	37.5%	6	33.3%	benign(0.019)	tolerated(0.97)	neutral(0.001)	NULL
UBIAD1	29914	genome.wustl.edu	37	1	11333813	11333813	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_013319.2	+1	reviewed	p.S75	0.976	112	0%	118	46.6%	8	37.5%	-	-	-	HMMPfam_UbiA
ARID1A	8289	genome.wustl.edu	37	1	27087961	27087961	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_006015.4	+1	reviewed	p.R750*	1.000	105	0%	90	48.9%	5	20%	-	-	-	NULL
STK40	83931	genome.wustl.edu	37	1	36824393	36824393	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_032017.1	-1	provisional	p.S48T	1.000	230	0%	226	41.6%	15	53.3%	probably_damaging(0.991)	deleterious(0.02)	deleterious(0.827)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
ST6GALNAC5	81849	genome.wustl.edu	37	1	77510062	77510062	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_030965.1	+1	provisional	p.A145	0.196	21	0%	21	19%	0	-	-	-	-	HMMPfam_Glyco_transf_29
SELENBP1	8991	genome.wustl.edu	37	1	151341500	151341500	+	Missense_Mutation	SNP	G	G	A	rs191782924	by1000genomes	TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_003944.2	-1	reviewed	p.R114W	1.000	46	0%	28	32.1%	16	25%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_SBP56,superfamily_Cyt_cd1_haem_C
CGN	57530	genome.wustl.edu	37	1	151501906	151501906	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_020770.2	+1	validated	p.D659	0.961	33	0%	25	48%	12	66.6%	-	-	-	NULL
ZNF648	127665	genome.wustl.edu	37	1	182026325	182026325	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001009992.1	-1	provisional	p.G274A	0.014	25	0%	24	29.2%	0	-	benign(0.264)	deleterious(0.04)	neutral(0.377)	superfamily_SSF57667
IMP4	92856	genome.wustl.edu	37	2	131103248	131103248	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_033416.1	+1	provisional	p.V139I	0.866	69	0%	71	39.4%	50	42%	benign(0.073)	tolerated(0.19)	neutral(0.054)	HMMPfam_Brix
LOC100133109	100133109	genome.wustl.edu	37	2	175584552	175584552	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	XM_001716442.2	-1	model	p.D142	0.073	32	0%	21	66.7%	46	0%	-	-	-	NULL
DNER	92737	genome.wustl.edu	37	2	230282893	230282893	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_139072.3	-1	validated	p.C514S	0.998	183	0%	189	41.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_EGF_CA,HMMPfam_EGF,PatternScan_EGF_CA,superfamily_SSF57196
RNF123	63891	genome.wustl.edu	37	3	49739802	49739802	+	Silent	SNP	T	T	C	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_022064.2	+1	reviewed	p.F531	1.000	72	0%	69	40.6%	6	66.6%	-	-	-	NULL
SAMD7	344658	genome.wustl.edu	37	3	169639051	169639051	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_182610.2	+1	provisional	p.V46I	0.073	274	0%	250	39.2%	0	-	benign(0.004)	tolerated(0.7)	neutral(0.002)	NULL
TNIK	23043	genome.wustl.edu	37	3	170856159	170856159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_015028.2	-1	validated	p.R477C	1.000	278	0.4%	349	39%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
COX7B2	170712	genome.wustl.edu	37	4	46736989	46736989	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_130902.2	-1	validated	p.T74I	0.589	228	0%	199	42.2%	0	-	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	HMMPfam_COX7B,superfamily_SSF81423
IGFBP7	3490	genome.wustl.edu	37	4	57907055	57907055	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001553.1	-1	provisional	p.G174S	1.000	84	0%	93	47.3%	1117	24.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
TLR2	7097	genome.wustl.edu	37	4	154625597	154625597	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_003264.3	+1	reviewed	p.T513M	0.000	88	0%	85	40%	3	33.3%	benign(0.012)	tolerated(0.56)	neutral(0.007)	superfamily_SSF52058
DCHS2	54798	genome.wustl.edu	37	4	155411072	155411072	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001142552.1	-1	validated	p.A479V	0.055	37	0%	36	44.4%	0	-	benign(0.004)	deleterious(0.02)	neutral(0.383)	HMMSmart_SM00112,superfamily_Cadherin-like
F11	2160	genome.wustl.edu	37	4	187206815	187206815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_000128.3	+1	reviewed	p.R443H	1.000	406	0%	421	43.2%	0	-	benign(0.369)	deleterious(0.01)	deleterious(0.523)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
ADCY2	108	genome.wustl.edu	37	5	7773097	7773097	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_020546.2	+1	reviewed	p.R756Q	1.000	358	0%	403	41.2%	2	0%	possibly_damaging(0.919)	tolerated(0.36)	neutral(0.390)	NULL
PIK3R1	5295	genome.wustl.edu	37	5	67588927	67588928	+	Splice_Site	INS	-	-	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_181523.1	+1	reviewed	e8-1	1.000:1.000	-	-	-	-	-	-	-	-	-	-
PIK3R1	5295	genome.wustl.edu	37	5	67591128	67591129	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_181523.1	+1	reviewed	p.T576fs	1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
NUP153	9972	genome.wustl.edu	37	6	17629745	17629745	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_005124.2	-1	reviewed	p.S895	0.000	112	0%	110	35.5%	8	62.5%	-	-	-	NULL
FRS3	10817	genome.wustl.edu	37	6	41738726	41738726	+	Silent	SNP	C	C	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_006653.3	-1	reviewed	p.L370	0.999	12	0%	19	63.2%	2	0%	-	-	-	NULL
IGF2R	3482	genome.wustl.edu	37	6	160500779	160500779	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_000876.2	+1	reviewed	p.A1882	0.993	294	0%	244	45.1%	6	50%	-	-	-	HMMPfam_CIMR,superfamily_Mannose 6-phosphate receptor domain
GPER	2852	genome.wustl.edu	37	7	1131888	1131888	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001039966.1	+1	reviewed	p.R175Q	0.996	32	0%	41	46.3%	5	20%	probably_damaging(0.995)	deleterious(0.04)	deleterious(0.806)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LMTK2	22853	genome.wustl.edu	37	7	97823316	97823316	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_014916.3	+1	reviewed	p.P1180L	0.000	42	0%	35	37.1%	3	33.3%	benign(0)	tolerated(1)	-	NULL
TRRAP	8295	genome.wustl.edu	37	7	98552894	98552894	+	Silent	SNP	C	C	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	ENST00000456197	+1	known	p.S1683C	0.025	41	0%	51	33.3%	6	0%	-	-	-	superfamily_ARM repeat
MOGAT3	346606	genome.wustl.edu	37	7	100839379	100839379	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	ENST00000440203	-1	known	p.W320*	1.000	49	0%	48	43.8%	0	-	-	-	-	NULL
PLXNA4	91584	genome.wustl.edu	37	7	132169702	132169702	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_181775.3	-1	validated	p.A481V	0.001	106	0.9%	99	36.4%	0	-	benign(0.007)	tolerated(0.21)	neutral(0.044)	HMMSmart_Sema,superfamily_Sema
RHEB	6009	genome.wustl.edu	37	7	151188050	151188050	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_005614.3	-1	reviewed	p.Y35N	1.000	376	0%	314	45.2%	30	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540
MBOAT4	619373	genome.wustl.edu	37	8	29989509	29989509	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001100916.1	-1	validated	p.Y420H	0.054	117	0%	162	34%	1	0%	probably_damaging(1)	tolerated(0.34)	deleterious(0.523)	NULL
KCNB2	9312	genome.wustl.edu	37	8	73848509	73848509	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_004770.2	+1	reviewed	p.R307C	1.000	112	0%	128	33.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
ZFHX4	79776	genome.wustl.edu	37	8	77764081	77764081	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_024721.4	+1	validated	p.V1597F	0.240	72	0%	104	49%	0	-	benign(0.099)	-	-	NULL
C8orf33	65265	genome.wustl.edu	37	8	146278811	146278811	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_023080.2	+1	validated	p.L178	0.006	103	0%	81	54.3%	29	48.2%	-	-	-	NULL
ST6GALNAC4	27090	genome.wustl.edu	37	9	130674833	130674833	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_175039.3	-1	reviewed	p.V109M	0.003	15	0%	21	38.1%	6	16.6%	benign(0.198)	tolerated(0.25)	neutral(0.056)	HMMPfam_Glyco_transf_29
PRRC2B	84726	genome.wustl.edu	37	9	134323131	134323131	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_013318.3	+1	validated	p.N354H	1.000	47	0%	38	60.5%	8	25%	probably_damaging(0.997)	deleterious(0.04)	deleterious(0.815)	NULL
CACNA1B	774	genome.wustl.edu	37	9	141000233	141000233	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_000718.2	+1	validated	p.T1801M	1.000	33	0%	38	47.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HSPA14	51182	genome.wustl.edu	37	10	14909903	14909903	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_016299.2	+1	validated	p.A459S	1.000	134	0%	130	48.5%	14	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Heat shock protein 70kD (HSP70) peptide-binding domain
HSPA14	51182	genome.wustl.edu	37	10	14909904	14909904	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_016299.2	+1	validated	p.A459V	1.000	132	0%	132	47%	15	6.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Heat shock protein 70kD (HSP70) peptide-binding domain
MYO3A	53904	genome.wustl.edu	37	10	26455078	26455078	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_017433.4	+1	reviewed	p.L1028I	1.000	190	0%	167	37.1%	0	-	possibly_damaging(0.857)	tolerated(0.15)	deleterious(0.572)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
PTEN	5728	genome.wustl.edu	37	10	89720865	89720866	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	ENST00000371953	+1	known	p.N340fs	1.000:1.000	-	-	-	-	-	-	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
SFXN2	118980	genome.wustl.edu	37	10	104491512	104491512	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_178858.4	+1	validated	p.R209K	0.983	115	0%	135	44.4%	6	66.6%	benign(0)	tolerated(0.11)	neutral(0.272)	HMMPfam_Mtc
TRPM5	29850	genome.wustl.edu	37	11	2434397	2434397	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_014555.3	-1	validated	p.T688M	0.001	38	0%	36	50%	0	-	benign(0.026)	tolerated(0.17)	neutral(0.060)	NULL
FAM168A	23201	genome.wustl.edu	37	11	73118593	73118593	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_015159.1	-1	predicted	p.V231M	1.000	243	0%	215	47%	5	20%	unknown(0)	-	-	NULL
CACNA1C	775	genome.wustl.edu	37	12	2676738	2676738	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_199460.2	+1	reviewed	p.T558M	0.990	39	0%	34	29.4%	0	-	probably_damaging(0.993)	tolerated(0.16)	deleterious(0.510)	superfamily_Voltage-gated potassium channels
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	A	rs121913529	byCluster	TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_033360.2	-1	reviewed	p.G12V	1.000	311	0%	476	62.2%	5	40%	benign(0.048)	deleterious(0)	neutral(0.448)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
OAS2	4939	genome.wustl.edu	37	12	113435439	113435439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_016817.2	+1	reviewed	p.V248I	0.128	176	0%	191	47.1%	2	50%	benign(0.01)	tolerated(0.13)	neutral(0.253)	HMMPfam_OAS1_C,superfamily_PAP/OAS1 substrate-binding domain
ING1	3621	genome.wustl.edu	37	13	111372025	111372025	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_005537.3	+1	reviewed	p.R339*	0.949	45	0%	45	37.8%	48	41.6%	-	-	-	NULL
CHD8	57680	genome.wustl.edu	37	14	21871262	21871262	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_020920.3	-1	reviewed	p.R931W	1.000	176	0%	153	44.4%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
STXBP6	29091	genome.wustl.edu	37	14	25444014	25444014	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_014178.6	-1	provisional	p.K4R	1.000	155	0%	152	38.8%	36	41.6%	probably_damaging(0.998)	tolerated(0.39)	deleterious(0.490)	NULL
TRIP4	9325	genome.wustl.edu	37	15	64706331	64706331	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_016213.3	+1	validated	p.P364L	0.791	181	0%	197	41.1%	20	40%	benign(0.003)	tolerated(0.07)	neutral(0.319)	NULL
WHAMM	123720	genome.wustl.edu	37	15	83485536	83485536	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001080435.1	+1	provisional	p.V292	0.000	265	0%	232	39.7%	3	33.3%	-	-	-	NULL
KLHL25	64410	genome.wustl.edu	37	15	86312924	86312924	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_022480.3	-1	validated	p.R40C	1.000	52	0%	87	33.3%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_BTB/POZ_fold,HMMPfam_BTB
MKL2	57496	genome.wustl.edu	37	16	14340822	14340822	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_014048.3	+1	validated	p.E569*	1.000	105	0%	99	44.4%	2	0%	-	-	-	NULL
ABCC1	4363	genome.wustl.edu	37	16	16101799	16101799	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_004996.3	+1	reviewed	p.R59*	0.013	490	0%	487	41.7%	2	0%	-	-	-	NULL
MYH13	8735	genome.wustl.edu	37	17	10248866	10248866	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_003802.2	-1	validated	p.R444H	1.000	426	0%	369	43.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
CCDC144A	9720	genome.wustl.edu	37	17	16623883	16623883	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_014695.1	+1	provisional	p.S601C	0.957	611	0%	543	36.6%	0	-	benign(0.354)	deleterious(0.01)	deleterious(0.518)	NULL
NF1	4763	genome.wustl.edu	37	17	29554278	29554278	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001042492.2	+1	reviewed	p.R765L	1.000	99	0%	125	35.2%	3	66.6%	benign(0.13)	deleterious(0.01)	neutral(0.417)	NULL
NF1	4763	genome.wustl.edu	37	17	29652853	29652853	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001042492.2	+1	reviewed	p.Q1617H	1.000	137	0%	149	40.3%	0	-	possibly_damaging(0.913)	deleterious(0.01)	deleterious(0.770)	HMMSmart_SM00516
GPATCH8	23131	genome.wustl.edu	37	17	42476495	42476495	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001002909.1	-1	validated	p.R984W	0.999	64	0%	84	45.2%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIF18B	146909	genome.wustl.edu	37	17	43012764	43012764	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001080443.1	-1	provisional	p.G112R	1.000	135	0%	111	47.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
OR4D2	124538	genome.wustl.edu	37	17	56247849	56247849	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001004707.3	+1	provisional	p.M278T	0.997	97	0%	112	47.3%	0	-	benign(0.103)	deleterious(0)	neutral(0.453)	HMMPfam_7tm_1,superfamily_SSF81321
USH1G	124590	genome.wustl.edu	37	17	72916298	72916298	+	Silent	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_173477.2	-1	reviewed	p.R211	1.000	29	0%	33	51.5%	1	0%	-	-	-	NULL
RNF165	494470	genome.wustl.edu	37	18	44015316	44015316	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_152470.2	+1	validated	p.L148V	1.000	98	0%	111	43.2%	0	-	benign(0.343)	tolerated(1)	neutral(0.108)	NULL
LOC440518	440518	genome.wustl.edu	37	19	22783193	22783193	+	RNA	SNP	G	G	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	XR_041921.2	+1	model	NULL	0.989	18	0%	18	38.9%	0	-	-	-	-	-
LSR	51599	genome.wustl.edu	37	19	35758275	35758276	+	In_Frame_Ins	INS	-	-	GGA	rs79703261		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_205834.2	+1	validated	p.520in_frame_insR	0.950:0.994	-	-	-	-	-	-	-	-	-	NULL
ETV2	2116	genome.wustl.edu	37	19	36135601	36135601	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_014209.2	+1	validated	p.Y292*	1.000	46	0%	28	46.4%	1	100%	-	-	-	HMMPfam_Ets,HMMSmart_ETS,PatternScan_ETS_DOMAIN_2,superfamily_SSF46785
FCGBP	8857	genome.wustl.edu	37	19	40408488	40408488	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_003890.2	-1	validated	p.L1451M	0.810	190	0%	169	27.2%	1	0%	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	NULL
ZNF415	55786	genome.wustl.edu	37	19	53612024	53612024	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_018355.2	-1	validated	p.S425L	0.000	259	0%	199	39.7%	3	66.6%	probably_damaging(0.989)	deleterious(0.02)	deleterious(0.823)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
DEFB126	81623	genome.wustl.edu	37	20	126073	126073	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_030931.2	+1	reviewed	p.K26E	0.619	170	0%	247	38.9%	0	-	benign(0.164)	deleterious(0.02)	neutral(0.398)	NULL
ZNF133	7692	genome.wustl.edu	37	20	18296623	18296623	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001083330.1	+1	validated	p.H375Q	1.000	77	0%	68	45.6%	9	44.4%	probably_damaging(0.963)	deleterious(0)	deleterious(0.850)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
C20orf26	26074	genome.wustl.edu	37	20	20257983	20257983	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_015585.3	+1	validated	p.A893T	0.033	96	0%	84	42.9%	8	62.5%	possibly_damaging(0.457)	tolerated(0.52)	neutral(0.159)	superfamily_FAD/NAD(P)-binding domain
DSCAM	1826	genome.wustl.edu	37	21	41710258	41710258	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001389.3	-1	validated	p.G518V	1.000	287	0%	271	42.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
MYO18B	84700	genome.wustl.edu	37	22	26164640	26164640	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_032608.5	+1	reviewed	p.L253M	0.000	67	0%	62	46.8%	0	-	possibly_damaging(0.519)	deleterious(0.03)	deleterious(0.539)	NULL
POLR2F	5435	genome.wustl.edu	37	22	38363691	38363691	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_021974.3	+1	reviewed	p.W118*	1.000	76	0%	87	44.8%	150	46%	-	-	-	superfamily_RPB6/omega subunit-like
KAL1	3730	genome.wustl.edu	37	X	8522045	8522045	+	Silent	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_000216.2	-1	reviewed	p.P434	0.035	432	0.2%	418	35.9%	0	-	-	-	-	HMMSmart_FN3
BMP15	9210	genome.wustl.edu	37	X	50653986	50653986	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_005448.2	+1	reviewed	p.R68Q	0.015	86	0%	84	54.8%	0	-	probably_damaging(0.992)	tolerated(0.15)	deleterious(0.689)	NULL
UBE2NL	389898	genome.wustl.edu	37	X	142967525	142967525	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A11W-01A-12D-A122-09	TCGA-B5-A11W-10A-01D-A122-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	89254a96-1194-4061-9524-b0ee3fce4ca2	eae37d12-b0c0-4f1b-9be3-cc1d8c580e53	NM_001012989.1	+1	reviewed	p.S108L	1.000	336	0%	365	42.2%	2	0%	possibly_damaging(0.482)	deleterious(0)	deleterious(0.605)	HMMPfam_UQ_con,HMMSmart_UBCc,superfamily_UBQ-conjugat/RWD-like
