Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1CF	29974	broad.mit.edu	37	10	52595854	52595854	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2M	2	broad.mit.edu	37	12	9243913	9243913	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107589339	107589339	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA7	10347	broad.mit.edu	37	19	1046443	1046443	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89401194	89401194	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAP3	116983	broad.mit.edu	37	1	1237394	1237394	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220397160	220397160	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACP6	51205	broad.mit.edu	37	1	147124513	147124513	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG2	72	broad.mit.edu	37	2	74143932	74143932	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTRT2	140625	broad.mit.edu	37	1	2938683	2938683	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33658393	33658393	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS13	11093	broad.mit.edu	37	9	136287523	136287523	+	5'UTR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5239672	5239672	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS7	11173	broad.mit.edu	37	15	79051780	79051780	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADARB1	104	broad.mit.edu	37	21	46602442	46602442	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131848677	131848677	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY9	115	broad.mit.edu	37	16	4057537	4057537	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31120330	31120330	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF3	3899	broad.mit.edu	37	2	100623335	100623335	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP11	119385	broad.mit.edu	37	10	88769657	88769657	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86790880	86790880	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4772770	4772770	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77783987	77783987	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77783989	77783989	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALAS1	211	broad.mit.edu	37	3	52236729	52236729	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDOB	229	broad.mit.edu	37	9	104189909	104189909	+	Nonsense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG13	79868	broad.mit.edu	37	X	110987964	110987964	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45941036	45941036	+	Silent	SNP	C	A	A	rs28395861	byFrequency	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPI	248	broad.mit.edu	37	2	233323382	233323382	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56196188	56196188	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMELX	265	broad.mit.edu	37	X	11316980	11316980	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114176923	114176923	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241420438	241420438	+	Missense_Mutation	SNP	C	A	A	rs149189286		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	74012897	74012897	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90348375	90348375	+	Silent	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA3	306	broad.mit.edu	37	4	79512740	79512740	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4B1	10717	broad.mit.edu	37	1	114437980	114437980	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4E1	23431	broad.mit.edu	37	15	51294665	51294665	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA2	336	broad.mit.edu	37	1	161192883	161192883	+	Intron	SNP	A	T	T	rs57498167		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116691784	116691784	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP12B	653437	broad.mit.edu	37	2	241622288	241622288	+	5'UTR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP7	364	broad.mit.edu	37	9	33386153	33386153	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	68962477	68962477	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17949410	17949410	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF2	9181	broad.mit.edu	37	1	155922403	155922403	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF5	7984	broad.mit.edu	37	7	144077006	144077006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID3C	138715	broad.mit.edu	37	9	34627776	34627776	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL6	84100	broad.mit.edu	37	3	97499142	97499142	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB14	142686	broad.mit.edu	37	3	57311911	57311911	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASNS	440	broad.mit.edu	37	7	97481664	97481664	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATN1	1822	broad.mit.edu	37	12	7048172	7048172	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A3	489	broad.mit.edu	37	17	3831394	3831394	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152806953	152806953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AURKB	9212	broad.mit.edu	37	17	8110861	8110861	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	69900823	69900823	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	70231185	70231185	+	Silent	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALNT2	148789	broad.mit.edu	37	1	235628937	235628937	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11039132	11039132	+	3'UTR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69943124	69943124	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70049174	70049174	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAN	63827	broad.mit.edu	37	1	156617416	156617416	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599628	136599628	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152770113	152770114	+	Missense_Mutation	DNP	GT	TA	TA			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC7	79444	broad.mit.edu	37	20	61869894	61869894	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13605874	13605874	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRMS1	25855	broad.mit.edu	37	11	66105334	66105334	+	3'UTR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTAF1	9044	broad.mit.edu	37	10	93702081	93702081	+	Intron	SNP	G	T	T	rs61669989		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BZW2	28969	broad.mit.edu	37	7	16720844	16720844	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf122	387718	broad.mit.edu	37	10	127356454	127356454	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf66	220004	broad.mit.edu	37	11	61250221	61250221	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf26	84190	broad.mit.edu	37	12	82783571	82783571	+	Intron	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf37	145407	broad.mit.edu	37	14	58471747	58471747	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf47	284083	broad.mit.edu	37	17	56620571	56620571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244643077	244643077	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf114	57821	broad.mit.edu	37	1	169393969	169393969	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf129	80133	broad.mit.edu	37	1	170940731	170940731	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf146	388649	broad.mit.edu	37	1	92697130	92697130	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57257990	57257990	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf175	374977	broad.mit.edu	37	1	55175477	55175477	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf26	54823	broad.mit.edu	37	1	185159774	185159774	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	46122226	46122226	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf99	149992	broad.mit.edu	37	21	14424037	14424037	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf16	84226	broad.mit.edu	37	2	27801985	27801985	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf70	339778	broad.mit.edu	37	2	26798827	26798827	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf125	84300	broad.mit.edu	37	6	33668479	33668479	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf167	253714	broad.mit.edu	37	6	97627259	97627259	+	Intron	DEL	C	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120704291	120704291	+	Splice_Site	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27922222	27922222	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf171	389799	broad.mit.edu	37	9	135357700	135357700	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf171	389799	broad.mit.edu	37	9	135374112	135374112	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	49731116	49731116	+	Intron	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140870356	140870356	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181701955	181701955	+	Silent	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181745260	181745260	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181745334	181745334	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1G	8913	broad.mit.edu	37	17	48681816	48681816	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81620635	81620635	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18803321	18803321	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159163316	159163316	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM4	199731	broad.mit.edu	37	19	44130001	44130001	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71418734	71418734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188280540	188280540	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93055955	93055955	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA2	23125	broad.mit.edu	37	17	4884585	4884585	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN2	824	broad.mit.edu	37	1	223943128	223943128	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2969504	2969504	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP7	840	broad.mit.edu	37	10	115457383	115457383	+	Intron	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219895376	219895376	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92979153	92979153	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC22	28952	broad.mit.edu	37	X	49106052	49106052	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180377471	180377471	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC41	51134	broad.mit.edu	37	12	94794689	94794689	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC53	51019	broad.mit.edu	37	12	102433651	102433651	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL4	6351	broad.mit.edu	37	17	34432750	34432750	+	3'UTR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50053795	50053795	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50055774	50055774	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNG2	901	broad.mit.edu	37	4	78081897	78081897	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD177	57126	broad.mit.edu	37	19	43857967	43857967	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158300661	158300661	+	Missense_Mutation	SNP	C	G	G	rs149817745	byFrequency	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3E	916	broad.mit.edu	37	11	118184376	118184376	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC34	997	broad.mit.edu	37	19	535739	535739	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24487878	24487878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24498638	24498638	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25543583	25543583	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60499428	60499428	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31299613	31299613	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105662683	105662683	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123162870	123162870	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109810125	109810125	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214820636	214820636	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100403107	100403107	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49060556	49060556	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117233361	117233361	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	180047644	180047644	+	Silent	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES1	1066	broad.mit.edu	37	16	55862795	55862795	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7812156	7812156	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIC1	53344	broad.mit.edu	37	X	72783310	72783310	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	447225	447226	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136622961	136622961	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA2	1135	broad.mit.edu	37	8	27328454	27328454	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA7	1139	broad.mit.edu	37	15	32450697	32450697	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHUK	1147	broad.mit.edu	37	10	101964958	101964958	+	Splice_Site	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CILP2	148113	broad.mit.edu	37	19	19654969	19654969	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120128050	120128050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN7	1186	broad.mit.edu	37	16	1499152	1499152	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN2	9075	broad.mit.edu	37	X	106171887	106171887	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1A	51267	broad.mit.edu	37	12	10233927	10233927	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSPN	63967	broad.mit.edu	37	1	36219571	36219571	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140281839	140281839	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87644951	87644951	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41323638	41323638	+	Silent	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205039560	205039560	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP3	79937	broad.mit.edu	37	9	39177505	39177505	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125521656	125521656	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG2	22796	broad.mit.edu	37	1	230824387	230824387	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75898142	75898142	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101797356	101797356	+	Missense_Mutation	SNP	C	T	T	rs142089094	byFrequency;by1000genomes	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94054501	94054501	+	Nonsense_Mutation	SNP	G	T	T	rs72659308		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94057055	94057055	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139727921	139727921	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189872191	189872191	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189910587	189910587	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238285946	238285946	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48614179	48614179	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPAMD8	27151	broad.mit.edu	37	19	17057956	17057956	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131388541	131388542	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211456608	211456608	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125530733	125530733	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8607723	8607723	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207881717	207881717	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207679324	207679324	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207751547	207751547	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREBBP	1387	broad.mit.edu	37	16	3781737	3781737	+	Intron	SNP	C	A	A	rs147033717	by1000genomes	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCCL1	84809	broad.mit.edu	37	1	16945715	16945715	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87011309	87011309	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149435008	149435008	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43671480	43671480	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34258067	34258067	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113668560	113668560	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2B	1460	broad.mit.edu	37	6	31636452	31636452	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT45A1	541466	broad.mit.edu	37	X	134856642	134856642	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSC	1075	broad.mit.edu	37	11	88061183	88061183	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL4B	8450	broad.mit.edu	37	X	119693910	119693910	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107968500	107968500	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111744579	111744579	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf59	286464	broad.mit.edu	37	X	36163029	36163030	+	3'UTR	INS	-	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLC1	1538	broad.mit.edu	37	X	83126380	83126380	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLD	1540	broad.mit.edu	37	16	50816329	50816329	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLD	1540	broad.mit.edu	37	16	50830431	50830431	+	3'UTR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLD	1540	broad.mit.edu	37	16	50830433	50830433	+	3'UTR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143957316	143957316	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143996446	143996446	+	Intron	DEL	C	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C19	1557	broad.mit.edu	37	10	96535107	96535107	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP8B1	1582	broad.mit.edu	37	3	42916449	42916449	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLB	221955	broad.mit.edu	37	7	6523595	6523595	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109292269	109292269	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAZL	1618	broad.mit.edu	37	3	16633690	16633690	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42811535	42811535	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBN1	1627	broad.mit.edu	37	5	176894942	176894942	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100715503	100715503	+	5'Flank	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L1	139170	broad.mit.edu	37	X	125686610	125686610	+	5'UTR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125298847	125298847	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCBLD1	285761	broad.mit.edu	37	6	117861841	117861841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCD	117159	broad.mit.edu	37	12	55041978	55041978	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155219801	155219801	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDN	23109	broad.mit.edu	37	12	49391858	49391858	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX43	55510	broad.mit.edu	37	6	74107367	74107367	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX49	54555	broad.mit.edu	37	19	19030529	19030529	+	5'UTR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60L	91351	broad.mit.edu	37	4	169300989	169300989	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117165723	117165723	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14188795	14188795	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS2	10202	broad.mit.edu	37	14	24113955	24113955	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39042906	39042906	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	233103338	233103338	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1497404	1497404	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1616686	1616686	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101201115	101201115	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX1	1745	broad.mit.edu	37	2	172952820	172952820	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMC1	11144	broad.mit.edu	37	22	38962738	38962738	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31838262	31838262	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32834589	32834589	+	Missense_Mutation	SNP	G	T	T	rs141028860		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51829083	51829083	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13820510	13820510	+	Silent	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB3	414061	broad.mit.edu	37	2	234652434	234652434	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC11	55735	broad.mit.edu	37	1	6727753	6727753	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3A	1788	broad.mit.edu	37	2	25498280	25498280	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNPEP	23549	broad.mit.edu	37	2	220246037	220246037	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117677516	117677516	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117731320	117731320	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117742200	117742200	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128821561	128821561	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169509853	169509853	+	Silent	SNP	G	A	A	rs140198889	byFrequency	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP1	1800	broad.mit.edu	37	16	89696934	89696934	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162850029	162850029	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97981448	97981448	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD1	1812	broad.mit.edu	37	5	174870192	174870192	+	5'UTR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113286122	113286122	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRG2	1819	broad.mit.edu	37	17	18002385	18002385	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205133027	205133027	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP26	78986	broad.mit.edu	37	8	33451145	33451145	+	Silent	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167082839	167082839	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102452390	102452390	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77427622	77427622	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2L	345930	broad.mit.edu	37	6	139167715	139167715	+	Silent	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57897521	57897521	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF2	1938	broad.mit.edu	37	19	3985484	3985484	+	5'Flank	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB4B	84766	broad.mit.edu	37	12	3763466	3763466	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHB	151651	broad.mit.edu	37	3	19938246	19938246	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL6	25975	broad.mit.edu	37	X	13621271	13621271	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHF	26298	broad.mit.edu	37	11	34680205	34680205	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140638453	140638453	+	Missense_Mutation	SNP	G	T	T	rs143891279		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E3	317649	broad.mit.edu	37	3	71745747	71745747	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G2	1982	broad.mit.edu	37	11	10822111	10822111	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML1	2009	broad.mit.edu	37	14	100375678	100375678	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR3	84658	broad.mit.edu	37	19	14762138	14762138	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX2	10495	broad.mit.edu	37	X	129771317	129771317	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132211593	132211593	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66189812	66189812	+	3'UTR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66467644	66467645	+	Nonsense_Mutation	DNP	CC	AG	AG			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220152742	220152742	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRP1	54845	broad.mit.edu	37	8	95653542	95653542	+	5'UTR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	216850615	216850615	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI5	7813	broad.mit.edu	37	1	93131509	93131509	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX1	2128	broad.mit.edu	37	7	27285494	27285494	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66112531	66112531	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197032176	197032176	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154157322	154157322	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184793597	184793597	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM132A	388581	broad.mit.edu	37	1	1178014	1178014	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134A	79137	broad.mit.edu	37	2	220046000	220046000	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM151A	338094	broad.mit.edu	37	1	55080475	55080475	+	Missense_Mutation	SNP	C	T	T	rs150113940	byFrequency	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15255798	15255798	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188B	84182	broad.mit.edu	37	7	30876532	30876532	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3A	60343	broad.mit.edu	37	X	153735087	153735087	+	3'UTR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3A	60343	broad.mit.edu	37	X	153740155	153740155	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34149137	34149137	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37028233	37028233	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37028467	37028467	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM49B	51571	broad.mit.edu	37	8	130891660	130891660	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM50A	9130	broad.mit.edu	37	X	153678642	153678642	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627706	43627706	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43628486	43628486	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83H	286077	broad.mit.edu	37	8	144811484	144811484	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM92B	339145	broad.mit.edu	37	16	85139058	85139058	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARSA	2193	broad.mit.edu	37	19	13041475	13041475	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187524791	187524791	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187557736	187557736	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126241342	126241342	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBF1	85302	broad.mit.edu	37	17	73910944	73910944	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127681130	127681130	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102667818	102667818	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO40	51725	broad.mit.edu	37	3	121345492	121345492	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCAR	2204	broad.mit.edu	37	19	55401199	55401199	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR1C	100132417	broad.mit.edu	37	1	149378159	149378159	+	RNA	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2B	2213	broad.mit.edu	37	1	161647046	161647046	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL2	79368	broad.mit.edu	37	1	157738381	157738381	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXR	2232	broad.mit.edu	37	17	72859251	72859251	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125061726	125061726	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125076699	125076699	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176520590	176520591	+	Intron	DNP	GG	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGG	2266	broad.mit.edu	37	4	155527940	155527940	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34298456	34298456	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34324019	34324019	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIBCD1	84929	broad.mit.edu	37	9	133799190	133799190	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP10	60681	broad.mit.edu	37	17	39978385	39978385	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP9	11328	broad.mit.edu	37	7	33014277	33014277	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152329152	152329152	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ36000	284124	broad.mit.edu	37	17	21904782	21904782	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ44054	643365	broad.mit.edu	37	13	114589645	114589645	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ44635	392490	broad.mit.edu	37	X	71364202	71364202	+	5'UTR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84605870	84605870	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84609108	84609108	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128486327	128486327	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXG1	2290	broad.mit.edu	37	14	29237565	29237565	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXG1	2290	broad.mit.edu	37	14	29237715	29237715	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP1	27086	broad.mit.edu	37	3	71015118	71015118	+	Silent	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1B	284802	broad.mit.edu	37	20	29614317	29614317	+	5'UTR	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTL	2512	broad.mit.edu	37	19	49469795	49469795	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTL	2512	broad.mit.edu	37	19	49469978	49469978	+	Missense_Mutation	SNP	C	G	G	rs1803580		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT9	10690	broad.mit.edu	37	6	96650972	96650972	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYN	2534	broad.mit.edu	37	6	111983191	111983191	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD10	11211	broad.mit.edu	37	12	130647951	130647951	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101148007	101148007	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46979500	46979500	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47033557	47033557	+	5'UTR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR2	2570	broad.mit.edu	37	6	89967797	89967797	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	101017690	101017690	+	Silent	SNP	C	A	A	rs149531123	byFrequency	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA4	2626	broad.mit.edu	37	8	11606502	11606502	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104121694	104121694	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP1	2633	broad.mit.edu	37	1	89525150	89525150	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP6	163351	broad.mit.edu	37	1	89846073	89846073	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCFC1	94104	broad.mit.edu	37	21	34136681	34136681	+	Silent	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72631444	72631444	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76979737	76979737	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFOD1	54438	broad.mit.edu	37	6	13365946	13365946	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGCT	79017	broad.mit.edu	37	7	30538724	30538724	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP8	155038	broad.mit.edu	37	7	150163825	150163825	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6644575	6644575	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL2	219970	broad.mit.edu	37	11	58605721	58605721	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL2	219970	broad.mit.edu	37	11	58605840	58605840	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GM2A	2760	broad.mit.edu	37	5	150948569	150948569	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNS	2799	broad.mit.edu	37	12	65130899	65130899	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37378685	37378685	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPA33	10223	broad.mit.edu	37	1	167024106	167024106	+	Intron	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPAT2	150763	broad.mit.edu	37	2	96698023	96698023	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH3	63906	broad.mit.edu	37	1	27227000	27227000	+	5'Flank	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC4	2239	broad.mit.edu	37	X	132548853	132548853	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPN2	54707	broad.mit.edu	37	1	27210847	27210847	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135430448	135430448	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135430861	135430861	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135445641	135445641	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22389516	22389516	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22390174	22390174	+	Silent	SNP	C	G	G	rs12700	byFrequency	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR174	84636	broad.mit.edu	37	X	78426624	78426624	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR174	84636	broad.mit.edu	37	X	78426925	78426925	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR32	2854	broad.mit.edu	37	19	51274893	51274893	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR45	11250	broad.mit.edu	37	2	105859317	105859317	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRASP1	9737	broad.mit.edu	37	X	101912716	101912716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158238855	158238855	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94343975	94343975	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94690490	94690490	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66935843	66935843	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3005809	3005809	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3005819	3005819	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSK3B	2932	broad.mit.edu	37	3	119760366	119760366	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSS	2937	broad.mit.edu	37	20	33516594	33516594	+	3'UTR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA5	221357	broad.mit.edu	37	6	52713654	52713654	+	5'Flank	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14778522	14778522	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBL2	375513	broad.mit.edu	37	6	58287740	58287740	+	5'Flank	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	144918640	144918640	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS7	55559	broad.mit.edu	37	X	152734677	152734677	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC6	10013	broad.mit.edu	37	X	48682427	48682427	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18536024	18536024	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43590144	43590144	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43594285	43594285	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28358497	28358497	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210560772	210560772	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75117984	75117984	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DRA	3122	broad.mit.edu	37	6	32411567	32411567	+	Silent	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186077558	186077558	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA3P1	10151	broad.mit.edu	37	10	44285350	44285350	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS1	3257	broad.mit.edu	37	10	100203147	100203147	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	25944657	25944657	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA14	51182	broad.mit.edu	37	10	14894416	14894416	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3211509	3211509	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70867931	70867931	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94274976	94274976	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH3G	3421	broad.mit.edu	37	X	153051701	153051701	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI16	3428	broad.mit.edu	37	1	159002405	159002405	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFLTD1	160492	broad.mit.edu	37	12	25699466	25699466	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160494947	160494947	+	Silent	SNP	C	T	T	rs140485195		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGLL3	91353	broad.mit.edu	37	22	25715839	25715839	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9B	22997	broad.mit.edu	37	11	133789980	133789980	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL19	29949	broad.mit.edu	37	1	206972208	206972208	+	5'Flank	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F7	27178	broad.mit.edu	37	2	113671403	113671403	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104992803	104992803	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL33	90865	broad.mit.edu	37	9	6241678	6241678	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5K	51763	broad.mit.edu	37	17	1412844	1412844	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC3	440073	broad.mit.edu	37	12	247477	247478	+	Frame_Shift_Del	DEL	GC	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IREB2	3658	broad.mit.edu	37	15	78770839	78770839	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107976663	107976663	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422283	31422283	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3663536	3663536	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6082074	6082074	+	Intron	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6082077	6082077	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM2	58494	broad.mit.edu	37	21	27071084	27071084	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63175029	63175029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH6	81033	broad.mit.edu	37	17	61613003	61613003	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19575253	19575253	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196394951	196394951	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KERA	11081	broad.mit.edu	37	12	91449623	91449623	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KERA	11081	broad.mit.edu	37	12	91449625	91449625	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0125	9834	broad.mit.edu	37	14	106376353	106376353	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48586330	48586331	+	Intron	DNP	TC	CT	CT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0430	9665	broad.mit.edu	37	16	15696062	15696062	+	Splice_Site	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154523459	154523459	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1009	22832	broad.mit.edu	37	6	84895174	84895174	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123274259	123274259	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123275152	123275152	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100056343	100056343	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73962484	73962484	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17837141	17837141	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF17	57576	broad.mit.edu	37	1	20992910	20992910	+	Intron	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72348838	72348838	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10363641	10363641	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55290253	55290253	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55272086	55272086	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55272324	55272324	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70281746	70281746	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70456367	70456367	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70681538	70681538	+	Silent	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86888896	86888896	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRIT1	889	broad.mit.edu	37	7	91854969	91854969	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT3	3850	broad.mit.edu	37	12	53187745	53187745	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT71	112802	broad.mit.edu	37	12	52944034	52944034	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT74	121391	broad.mit.edu	37	12	52967091	52967091	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP1-5	83895	broad.mit.edu	37	17	39183145	39183145	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP11-1	337880	broad.mit.edu	37	21	32253732	32253732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-5	337972	broad.mit.edu	37	21	31874502	31874502	+	5'Flank	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP6-1	337966	broad.mit.edu	37	21	31986019	31986019	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR1	8844	broad.mit.edu	37	17	25930942	25930942	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153128312	153128312	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153130448	153130448	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153132929	153132929	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153136381	153136381	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54872462	54872462	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129635775	129635775	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49161443	49161443	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107708662	107708662	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107752392	107752392	+	Splice_Site	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107756565	107756565	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133962991	133962991	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBR	3930	broad.mit.edu	37	1	225594242	225594242	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16504594	16504594	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHA	3939	broad.mit.edu	37	11	18424599	18424599	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66066917	66066917	+	Intron	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55177363	55177363	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55179179	55179179	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97800896	97800896	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100129055	100129055	broad.mit.edu	37	10	38465114	38465114	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC134466	134466	broad.mit.edu	37	5	150311160	150311160	+	3'UTR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148021473	148021473	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148342291	148342291	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284441	284441	broad.mit.edu	37	19	20369153	20369153	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC348926	348926	broad.mit.edu	37	4	3955037	3955037	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC349196	349196	broad.mit.edu	37	8	7199626	7199626	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC389458	389458	broad.mit.edu	37	7	5074889	5074889	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643955	643955	broad.mit.edu	37	7	62753165	62753165	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82418779	82418779	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62845477	62845477	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN1	23175	broad.mit.edu	37	2	11905848	11905848	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH2	57631	broad.mit.edu	37	X	114422812	114422812	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN2	57497	broad.mit.edu	37	6	40399507	40399507	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG1	26018	broad.mit.edu	37	3	66502041	66502041	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141079783	141079783	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141274503	141274503	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141707905	141707905	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44175160	44175161	+	Intron	INS	-	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC42	115353	broad.mit.edu	37	1	54417792	54417792	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC6	23639	broad.mit.edu	37	8	133650267	133650267	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	116163902	116163902	+	5'UTR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33525618	33525618	+	Silent	SNP	G	A	A	rs139837372		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLA1	10434	broad.mit.edu	37	8	55013426	55013426	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235922575	235922575	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148797199	148797199	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1A	4130	broad.mit.edu	37	15	43821703	43821703	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71491553	71491553	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21216886	21216886	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK7	5598	broad.mit.edu	37	17	19283155	19283155	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK4	57787	broad.mit.edu	37	19	45762188	45762188	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST3	23031	broad.mit.edu	37	19	18256519	18256519	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD1	4152	broad.mit.edu	37	18	47796222	47796222	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBNL2	10150	broad.mit.edu	37	13	98017264	98017264	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBTPS2	51360	broad.mit.edu	37	X	21887655	21887655	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCPH1	79648	broad.mit.edu	37	8	6335061	6335061	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49952855	49952855	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37184485	37184485	+	Missense_Mutation	SNP	G	T	T	rs139991974		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37184493	37184493	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46794188	46794188	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116371664	116371664	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3D	399664	broad.mit.edu	37	19	1556669	1556669	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	42028569	42028569	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1302-3	100302128	broad.mit.edu	37	2	114340744	114340744	+	5'Flank	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR513A1	574509	broad.mit.edu	37	X	146294989	146294989	+	RNA	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129903152	129903152	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC4	79710	broad.mit.edu	37	X	106224776	106224776	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	17080454	17080454	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A1	931	broad.mit.edu	37	11	60231748	60231748	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSRA	4482	broad.mit.edu	37	8	10102509	10102509	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149826538	149826538	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR7	9108	broad.mit.edu	37	8	17162060	17162060	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7873741	7873741	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9027477	9027477	+	Intron	DEL	G	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9047244	9047244	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9091786	9091786	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MVK	4598	broad.mit.edu	37	12	110019129	110019129	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3235264	3235264	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15843974	15843974	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10235579	10235579	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108147249	108147249	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10408600	10408600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10443453	10443453	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10533474	10533474	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10358324	10358324	+	Missense_Mutation	SNP	G	A	A	rs143572602	byFrequency	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109507931	109507931	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109550505	109550505	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27401671	27401671	+	3'UTR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1F	4542	broad.mit.edu	37	19	8642129	8642129	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128394877	128394878	+	Intron	INS	-	T	T	rs145800733	by1000genomes	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOD1	4654	broad.mit.edu	37	11	17741219	17741219	+	5'UTR	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2026987	2026987	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA10	8260	broad.mit.edu	37	X	153197641	153197641	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAB2	4665	broad.mit.edu	37	12	57485457	57485457	+	Silent	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAMPT	10135	broad.mit.edu	37	7	105893628	105893628	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARF	26502	broad.mit.edu	37	17	80445829	80445829	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201781872	201781872	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78531252	78531252	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15417165	15417165	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15567913	15567913	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35630253	35630253	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPG2	54892	broad.mit.edu	37	7	158468339	158468339	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCBP1	4686	broad.mit.edu	37	9	100413658	100413658	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54930662	54930662	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA1	8648	broad.mit.edu	37	2	24933898	24933898	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00182	100302692	broad.mit.edu	37	X	73327583	73327583	+	Intron	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS6	4726	broad.mit.edu	37	5	1816034	1816034	+	3'UTR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHP2L1	4809	broad.mit.edu	37	22	42070894	42070894	+	3'UTR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAP	79576	broad.mit.edu	37	X	119059436	119059436	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD2	85409	broad.mit.edu	37	5	1037955	1037955	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKTR	4820	broad.mit.edu	37	3	42674309	42674309	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56538820	56538820	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOM1	64434	broad.mit.edu	37	7	156752947	156752948	+	Intron	INS	-	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101604708	101604708	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	72897699	72897699	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32774719	32774719	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115411725	115411725	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206614460	206614460	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152027285	152027285	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152031272	152031272	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP153	9972	broad.mit.edu	37	6	17669290	17669290	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154030966	154030966	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP88	4927	broad.mit.edu	37	17	5308400	5308400	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101092851	101092851	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXPH2	11249	broad.mit.edu	37	2	139429037	139429037	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123615651	123615651	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	124097540	124097540	+	Silent	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74692166	74692166	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67417059	67417059	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1LW	5956	broad.mit.edu	37	X	153420135	153420135	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPTN	10133	broad.mit.edu	37	10	13152401	13152401	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N2	138882	broad.mit.edu	37	9	125315473	125315473	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A12	346525	broad.mit.edu	37	7	143792543	143792543	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143826593	143826593	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247769209	247769209	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248436320	248436320	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22414180	22414180	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98188738	98188738	+	Silent	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K4	403278	broad.mit.edu	37	3	98072805	98072805	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	56000616	56000616	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875457	247875457	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N1	128372	broad.mit.edu	37	1	158735770	158735770	+	Silent	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749461	142749461	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21737755	21737755	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN3	29763	broad.mit.edu	37	11	47201708	47201708	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9546642	9546642	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169837113	169837113	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34649299	34649299	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150839405	150839405	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91715531	91715531	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91873455	91873455	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91873500	91873500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140589769	140589769	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140562573	140562573	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB6	56130	broad.mit.edu	37	5	140531776	140531776	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140711266	140711266	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB1	56104	broad.mit.edu	37	5	140730903	140730903	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCTP	58488	broad.mit.edu	37	17	53848679	53848679	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165827065	165827065	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178565767	178565767	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183129158	183129158	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66713283	66713283	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6B	5158	broad.mit.edu	37	4	619514	619514	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA5	10954	broad.mit.edu	37	3	122864369	122864369	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119133732	119133732	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73432636	73432636	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73450069	73450069	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHB	5245	broad.mit.edu	37	17	47486894	47486894	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF8	23133	broad.mit.edu	37	X	54012298	54012298	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18963152	18963153	+	Intron	DNP	CA	AT	AT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4K2A	55361	broad.mit.edu	37	10	99361691	99361691	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21174084	21174084	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGL	9487	broad.mit.edu	37	17	16203297	16203297	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PILRB	29990	broad.mit.edu	37	7	99956683	99956683	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL3	440822	broad.mit.edu	37	22	25144805	25144805	+	Intron	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1	5310	broad.mit.edu	37	16	2159381	2159382	+	Missense_Mutation	DNP	CT	AA	AA			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1	5310	broad.mit.edu	37	16	2164306	2164306	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110431379	110431379	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42373659	42373659	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD1	79887	broad.mit.edu	37	12	14706377	14706378	+	Intron	DNP	CC	AT	AT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD2	196463	broad.mit.edu	37	12	113812392	113812392	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8719992	8719992	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8745782	8745782	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH2	9651	broad.mit.edu	37	1	2428371	2428371	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242511434	242511434	+	Silent	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK2	26499	broad.mit.edu	37	14	67864299	67864299	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHN1	84069	broad.mit.edu	37	1	909612	909612	+	Intron	DEL	G	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHO1	51177	broad.mit.edu	37	1	150130988	150130988	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB1	5364	broad.mit.edu	37	3	48459666	48459666	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153036200	153036200	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153039556	153039556	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160221592	160221592	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2G	5436	broad.mit.edu	37	11	62532503	62532503	+	Intron	DEL	G	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79773421	79773421	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121C	100101267	broad.mit.edu	37	7	75052311	75052311	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121C	100101267	broad.mit.edu	37	7	75103857	75103857	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMGNT1	55624	broad.mit.edu	37	1	46658031	46658031	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POPDC3	64208	broad.mit.edu	37	6	105609673	105609673	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23814457	23814457	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPOX	5498	broad.mit.edu	37	1	161138874	161138875	+	Missense_Mutation	DNP	GC	AT	AT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R1A	5502	broad.mit.edu	37	12	54974908	54974908	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2CB	5516	broad.mit.edu	37	8	30669865	30669865	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5A	5525	broad.mit.edu	37	1	212502571	212502571	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PQBP1	10084	broad.mit.edu	37	X	48759733	48759733	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM11	56981	broad.mit.edu	37	11	45226314	45226314	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM14	63978	broad.mit.edu	37	8	70971045	70971045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23510114	23510114	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX4	10549	broad.mit.edu	37	X	23697293	23697293	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47265824	47265824	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47276715	47276715	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCA	5578	broad.mit.edu	37	17	64728940	64728940	+	Silent	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24202456	24202456	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6498720	6498720	+	Silent	SNP	C	A	A	rs55867019		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRC1	133619	broad.mit.edu	37	5	126887380	126887380	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSAPL1	768239	broad.mit.edu	37	4	7435591	7435591	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD3	55037	broad.mit.edu	37	2	86357893	86357893	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9317851	9317851	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154493532	154493532	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154493561	154493561	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51C	5889	broad.mit.edu	37	17	56774181	56774181	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RADIL	55698	broad.mit.edu	37	7	4845039	4845040	+	Intron	DEL	GC	-	-	rs148730991	by1000genomes	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPA2	57186	broad.mit.edu	37	20	20563737	20563737	+	Silent	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109371228	109371228	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36251594	36251594	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36271474	36271474	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3	8498	broad.mit.edu	37	19	5918634	5918634	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25621956	25621956	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF2	9770	broad.mit.edu	37	20	4776594	4776594	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM28	55131	broad.mit.edu	37	7	127979269	127979269	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM9	23543	broad.mit.edu	37	22	36164288	36164288	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1B	5968	broad.mit.edu	37	2	79314114	79314114	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELB	5971	broad.mit.edu	37	19	45529040	45529040	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103270309	103270309	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO1L1	254958	broad.mit.edu	37	8	86573790	86573790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGMB	285704	broad.mit.edu	37	5	98128880	98128880	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD1	400966	broad.mit.edu	37	2	87205211	87205211	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108489238	108489238	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCG	51458	broad.mit.edu	37	15	90019991	90019991	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHD	6007	broad.mit.edu	37	1	25627475	25627475	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104671646	104671646	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105025733	105025734	+	Intron	DNP	CC	AA	AA			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF152	220441	broad.mit.edu	37	18	59483224	59483224	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF168	165918	broad.mit.edu	37	3	196229932	196229932	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77147283	77147283	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77542523	77542523	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE	6120	broad.mit.edu	37	2	210867544	210867544	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRN3	54700	broad.mit.edu	37	16	15155638	15155638	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSL24D1	51187	broad.mit.edu	37	15	55475659	55475659	+	Intron	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	6820616	6820616	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSU1	6251	broad.mit.edu	37	10	16635619	16635619	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTF1	23168	broad.mit.edu	37	15	41767680	41767680	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP3	51289	broad.mit.edu	37	5	33937505	33937505	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38948237	38948237	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38991553	38991553	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608683	237608683	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237656311	237656311	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237951363	237951363	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A3	6274	broad.mit.edu	37	1	153520343	153520343	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACM1L	22908	broad.mit.edu	37	3	45784960	45784960	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23932672	23932672	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51174774	51174774	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARDH	1757	broad.mit.edu	37	9	136582532	136582532	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARM1	23098	broad.mit.edu	37	17	26715397	26715397	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP3	10067	broad.mit.edu	37	1	155226464	155226464	+	Splice_Site	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD1	23256	broad.mit.edu	37	14	31191696	31191696	+	Intron	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165948713	165948713	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167142874	167142874	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAP1	255812	broad.mit.edu	37	3	195712656	195712656	+	5'UTR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHD	6392	broad.mit.edu	37	11	111959712	111959712	+	Silent	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71394502	71394502	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L1	6397	broad.mit.edu	37	17	75208256	75208256	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83799966	83799966	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELE	6401	broad.mit.edu	37	1	169701111	169701111	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84657650	84657650	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48053382	48053382	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMG1	6406	broad.mit.edu	37	20	43836993	43836993	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPSECS	51091	broad.mit.edu	37	4	25125605	25125605	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT4	5414	broad.mit.edu	37	17	56598633	56598633	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB5	5268	broad.mit.edu	37	18	61160414	61160414	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE1	5054	broad.mit.edu	37	7	100773778	100773779	+	Frame_Shift_Del	DEL	CA	-	-	rs149070955		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB2	83852	broad.mit.edu	37	13	50038170	50038170	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCA	6442	broad.mit.edu	37	17	48245884	48245884	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77471865	77471865	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGTA	6449	broad.mit.edu	37	19	2762622	2762622	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGTA	6449	broad.mit.edu	37	19	2769172	2769172	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2829097	2829097	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51215467	51215467	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51123181	51123181	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA5	51246	broad.mit.edu	37	3	48511280	48511280	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3669764	3669764	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52034802	52034802	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIN3A	25942	broad.mit.edu	37	15	75715034	75715034	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232581492	232581492	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1903223	1903223	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160459876	160459877	+	Intron	DNP	AC	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A5	347051	broad.mit.edu	37	8	82606414	82606415	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A40	55972	broad.mit.edu	37	7	87476206	87476206	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A2	11001	broad.mit.edu	37	15	50489983	50489983	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35D2	11046	broad.mit.edu	37	9	99086537	99086537	+	Intron	SNP	C	A	A	rs147730425	by1000genomes	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A10	57181	broad.mit.edu	37	2	196545644	196545644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33964062	33964062	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A11	83959	broad.mit.edu	37	20	3215504	3215504	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A10P	386757	broad.mit.edu	37	16	32891102	32891102	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A9	11136	broad.mit.edu	37	19	33355102	33355103	+	Frame_Shift_Ins	INS	-	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21331534	21331534	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN12L	342615	broad.mit.edu	37	17	33817332	33817332	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144904509	144904509	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95202786	95202786	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMO	6608	broad.mit.edu	37	7	128851663	128851663	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNUPN	10073	broad.mit.edu	37	15	75902273	75902273	+	Silent	SNP	G	A	A	rs139633458		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX25	83891	broad.mit.edu	37	4	186231802	186231802	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101612589	101612589	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108380225	108380225	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108389288	108389288	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23818249	23818249	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG1	6674	broad.mit.edu	37	8	101196189	101196189	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG4	6676	broad.mit.edu	37	20	34206307	34206307	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPARC	6678	broad.mit.edu	37	5	151051154	151051154	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA17	128153	broad.mit.edu	37	1	218023995	218023995	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA8	145946	broad.mit.edu	37	15	97326876	97326877	+	5'UTR	DNP	GG	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220353067	220353067	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEN	23013	broad.mit.edu	37	1	16265829	16265829	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK5	11005	broad.mit.edu	37	5	147493975	147493975	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167675580	167675580	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55648819	55648819	+	5'Flank	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPSB1	80176	broad.mit.edu	37	1	9416498	9416499	+	Frame_Shift_Ins	INS	-	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158647525	158647525	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGN	5552	broad.mit.edu	37	10	70856807	70856807	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107460416	107460416	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52546575	52546575	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD7	56910	broad.mit.edu	37	2	96860740	96860740	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON2	85439	broad.mit.edu	37	14	81837206	81837206	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN4	29888	broad.mit.edu	37	19	47223906	47223906	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125474279	125474279	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT2B1	6820	broad.mit.edu	37	19	49100065	49100065	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMF2	25870	broad.mit.edu	37	7	56136148	56136148	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27009025	27009026	+	Intron	DNP	GG	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27009765	27009766	+	Missense_Mutation	DNP	GG	TC	TC			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75597285	75597285	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCE2	256126	broad.mit.edu	37	19	13030145	13030145	+	5'Flank	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115487071	115487071	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152470489	152470489	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39811578	39811578	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1	6872	broad.mit.edu	37	X	70608421	70608421	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R1	80835	broad.mit.edu	37	1	6631143	6631143	+	Silent	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19186147	19186147	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17208305	17208305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17299997	17299997	+	Splice_Site	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17446355	17446355	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13325494	13325494	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8B	54885	broad.mit.edu	37	X	106083270	106083270	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBRG4	9238	broad.mit.edu	37	7	45145176	45145176	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX20	57057	broad.mit.edu	37	7	35271187	35271187	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79278745	79278745	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEF	7008	broad.mit.edu	37	22	41790242	41790242	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERT	7015	broad.mit.edu	37	5	1278556	1278557	+	Intron	INS	-	CA	CA	rs150656025	by1000genomes	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56688569	56688569	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30706087	30706087	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2C	7022	broad.mit.edu	37	20	55208437	55208437	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2C	7022	broad.mit.edu	37	20	55208655	55208655	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50718973	50718973	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP1	7027	broad.mit.edu	37	13	114290775	114290775	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR1	7046	broad.mit.edu	37	9	101907147	101907147	+	Silent	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133941459	133941459	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11419041	11419041	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32639219	32639219	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIE1	7075	broad.mit.edu	37	1	43783350	43783351	+	Intron	INS	-	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP1	7082	broad.mit.edu	37	15	30024944	30024944	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE1	7088	broad.mit.edu	37	9	84206063	84206063	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK2	11011	broad.mit.edu	37	17	60598335	60598335	+	Intron	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC3	342125	broad.mit.edu	37	15	81628884	81628884	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19475405	19475405	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED9	54732	broad.mit.edu	37	5	177019411	177019411	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM146	257062	broad.mit.edu	37	19	5748290	5748290	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15470800	15470800	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPPE	643853	broad.mit.edu	37	3	33134917	33134917	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11B	132724	broad.mit.edu	37	4	69107500	69107500	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19687580	19687580	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC4	84899	broad.mit.edu	37	13	101277998	101277998	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP3	7128	broad.mit.edu	37	6	138199923	138199923	+	Silent	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF4	7293	broad.mit.edu	37	1	1148430	1148430	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF8	943	broad.mit.edu	37	1	12198276	12198276	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175334328	175334328	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP3A	7156	broad.mit.edu	37	17	18206059	18206059	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577108	7577108	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	T	T	rs28934578		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72372514	72372514	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPI1	7167	broad.mit.edu	37	12	6979285	6979285	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144344276	144344276	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1499813	1499813	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186308929	186308929	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF7	84231	broad.mit.edu	37	16	2225515	2225515	+	Silent	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140401341	140401341	+	Missense_Mutation	SNP	C	A	A	rs149207203	byFrequency	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14482705	14482705	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT61B	55006	broad.mit.edu	37	2	29092772	29092772	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111195495	111195495	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77377953	77377953	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3427383	3427383	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98602013	98602013	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSGA10IP	254187	broad.mit.edu	37	11	65714870	65714870	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPYL2	64061	broad.mit.edu	37	X	53115108	53115108	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSR2	90121	broad.mit.edu	37	X	54467093	54467093	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166773863	166773863	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47251456	47251456	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179441915	179441915	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179567252	179567252	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132235910	132235910	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUFM	7284	broad.mit.edu	37	16	28856776	28856776	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UAP1L1	91373	broad.mit.edu	37	9	139976619	139976620	+	Intron	DNP	GG	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2CBP	90025	broad.mit.edu	37	6	83748197	83748197	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2J1	51465	broad.mit.edu	37	6	90039587	90039587	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBFD1	56061	broad.mit.edu	37	16	23573999	23573999	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN4	56893	broad.mit.edu	37	1	156020953	156020953	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCP1	7350	broad.mit.edu	37	4	141489823	141489823	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A8	54576	broad.mit.edu	37	2	234526902	234526902	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A9	54600	broad.mit.edu	37	2	234581299	234581299	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK1	8408	broad.mit.edu	37	12	132401562	132401562	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73053217	73053217	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35631950	35631950	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF3B	65109	broad.mit.edu	37	X	118974750	118974750	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229779310	229779310	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126220156	126220156	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17517100	17517100	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215844674	215844674	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP11	8237	broad.mit.edu	37	X	47107228	47107228	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP26	83844	broad.mit.edu	37	X	132162134	132162134	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57641161	57641161	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57641213	57641213	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14A	10813	broad.mit.edu	37	X	129054695	129054695	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37284373	37284373	+	IGR	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38369506	38369506	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38743745	38743745	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	65929962	65929962	+	IGR	SNP	G	C	C	rs35461825		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	92814319	92814319	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	23815163	23815163	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	39183104	39183104	+	IGR	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4744303	4744303	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55493973	55493973	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56098826	56098826	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	57344344	57344344	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89808071	89808071	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10977917	10977917	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127349944	127349944	+	IGR	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	56774870	56774870	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80658807	80658807	+	IGR	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80729818	80729818	+	IGR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53171460	53171460	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59102855	59102855	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	69559743	69559743	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90823749	90823749	+	IGR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19413209	19413209	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20647781	20647781	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95267592	95267592	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20446161	20446161	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22567154	22567154	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60257184	60257184	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	18125473	18125473	+	IGR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32178184	32178184	+	IGR	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32178238	32178238	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32883326	32883326	+	IGR	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33498186	33498186	+	IGR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33500199	33500199	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21827730	21827730	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26079797	26079797	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	69617197	69617197	+	IGR	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	13140302	13140302	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	41901969	41901969	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23779849	23779849	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	117283005	117283005	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149039763	149039763	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	16317126	16317126	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	165991540	165991540	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	167131993	167131993	+	IGR	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	222642032	222642032	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	246675377	246675377	+	IGR	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79520959	79520959	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91489569	91489569	+	IGR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29930978	29930978	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10863173	10863173	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181298	11181298	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14800158	14800158	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20230064	20230064	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34986508	34986508	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107107633	107107633	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133019058	133019058	+	IGR	SNP	C	A	A	rs138784003	by1000genomes	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	154277885	154277885	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	175175545	175175545	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	181737830	181737830	+	IGR	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222827370	222827370	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81423700	81423700	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	128257012	128257013	+	IGR	DNP	GG	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	139213053	139213053	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35258125	35258125	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	44751027	44751027	+	IGR	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75433083	75433083	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97783467	97783467	+	IGR	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	10413152	10413152	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	11374357	11374358	+	IGR	INS	-	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116064523	116064523	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190394492	190394492	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	28825725	28825725	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57460030	57460030	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70113608	70113608	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	78909242	78909242	+	IGR	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105752426	105752427	+	IGR	DNP	CC	AA	AA			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105752943	105752943	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	107062447	107062447	+	IGR	SNP	G	A	A	rs143360973	by1000genomes	TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126506127	126506127	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	136193200	136193200	+	IGR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180722023	180722023	+	IGR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23304154	23304154	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25911345	25911345	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	77081270	77081270	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84295745	84295745	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	86180432	86180432	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98016043	98016043	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112687300	112687300	+	IGR	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	34544292	34544292	+	IGR	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66804630	66804630	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	118590990	118590990	+	IGR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	130528468	130528468	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	149031541	149031541	+	IGR	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27532037	27532037	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	39905975	39905975	+	IGR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55780895	55780895	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63033712	63033712	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63929561	63929561	+	IGR	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63961257	63961257	+	IGR	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36953258	36953258	+	IGR	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653495	50653495	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	61852401	61852401	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	6973289	6973289	+	IGR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73139181	73139181	+	IGR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92610612	92610612	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	124282505	124282505	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	32947155	32947155	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68357157	68357157	+	IGR	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	81652520	81652520	+	IGR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90631646	90631646	+	IGR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	99918758	99918758	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	106845685	106845685	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	110864353	110864353	+	IGR	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118354810	118354810	+	IGR	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	121672979	121672979	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127261319	127261319	+	IGR	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134741897	134741897	+	IGR	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134773246	134773247	+	IGR	DNP	GG	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134774642	134774642	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136743702	136743702	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136743870	136743870	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146294853	146294853	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	155215919	155215919	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	72744776	72744776	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	72989976	72989976	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	7618512	7618512	+	IGR	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	91931698	91931698	+	IGR	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92297923	92297923	+	IGR	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6825072	6825072	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VDAC1	7416	broad.mit.edu	37	5	133316688	133316688	+	Intron	SNP	A	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VMA21	203547	broad.mit.edu	37	X	150572277	150572277	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPRBP	9730	broad.mit.edu	37	3	51475837	51475837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS72	6944	broad.mit.edu	37	1	151150671	151150671	+	Intron	DEL	C	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WAC	51322	broad.mit.edu	37	10	28872558	28872558	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR16	146845	broad.mit.edu	37	17	9538752	9538752	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39207199	39207199	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36581311	36581311	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR93	56964	broad.mit.edu	37	15	90272193	90272194	+	Intron	DNP	CC	TA	TA			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFIKKN2	124857	broad.mit.edu	37	17	48917075	48917076	+	Missense_Mutation	DNP	CA	AG	AG			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	167760365	167760365	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168107427	168107427	+	Silent	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128888569	128888569	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128901653	128901653	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDF1	54915	broad.mit.edu	37	20	61834123	61834123	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100364781	100364781	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100386739	100386739	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77912693	77912693	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77913149	77913149	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC7	84186	broad.mit.edu	37	9	37354613	37354613	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207171353	207171353	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC9	51114	broad.mit.edu	37	X	128962856	128962856	+	Intron	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77765759	77765759	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77776250	77776250	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106431025	106431025	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR2	23217	broad.mit.edu	37	19	3834766	3834766	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM2	23619	broad.mit.edu	37	19	57286803	57286804	+	Frame_Shift_Ins	INS	-	A	A	rs149106731		TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT1	84460	broad.mit.edu	37	X	101152922	101152922	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF17	7565	broad.mit.edu	37	19	57931586	57931586	+	Silent	SNP	A	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF180	7733	broad.mit.edu	37	19	44981270	44981270	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF187	7741	broad.mit.edu	37	6	28240024	28240024	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22154156	22154156	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22155846	22155846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF248	57209	broad.mit.edu	37	10	38108174	38108174	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF257	113835	broad.mit.edu	37	19	22255608	22255608	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF271	10778	broad.mit.edu	37	18	32887072	32887072	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF286B	729288	broad.mit.edu	37	17	18566444	18566444	+	Silent	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF347	84671	broad.mit.edu	37	19	53643854	53643854	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF367	195828	broad.mit.edu	37	9	99160442	99160442	+	Intron	SNP	T	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21605967	21605967	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF445	353274	broad.mit.edu	37	3	44496938	44496938	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF485	220992	broad.mit.edu	37	10	44112635	44112635	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF511	118472	broad.mit.edu	37	10	135123552	135123552	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF513	130557	broad.mit.edu	37	2	27600625	27600625	+	Silent	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF547	284306	broad.mit.edu	37	19	57876406	57876406	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF556	80032	broad.mit.edu	37	19	2877918	2877918	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF578	147660	broad.mit.edu	37	19	53014138	53014138	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF596	169270	broad.mit.edu	37	8	195623	195623	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF665	79788	broad.mit.edu	37	19	53668345	53668345	+	Silent	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF704	619279	broad.mit.edu	37	8	81557434	81557434	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF738	148203	broad.mit.edu	37	19	21566952	21566952	+	3'UTR	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF765	91661	broad.mit.edu	37	19	53905468	53905468	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF76	7629	broad.mit.edu	37	6	35260373	35260373	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF77	58492	broad.mit.edu	37	19	2934603	2934603	+	Silent	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF98	148198	broad.mit.edu	37	19	22574230	22574230	+	3'UTR	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF98	148198	broad.mit.edu	37	19	22575688	22575688	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238051640	238051640	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238051837	238051837	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPBP	11055	broad.mit.edu	37	7	49983225	49983225	+	Intron	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58556758	58556758	+	Intron	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58564911	58564911	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM3	140831	broad.mit.edu	37	20	44506100	44506100	+	Silent	SNP	C	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZUFSP	221302	broad.mit.edu	37	6	116988239	116988239	+	Silent	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZYX	7791	broad.mit.edu	37	7	143080351	143080351	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZYX	7791	broad.mit.edu	37	7	143080397	143080397	+	Silent	SNP	G	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZZ3	26009	broad.mit.edu	37	1	78098198	78098198	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	44983900	44983900	+	5'Flank	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31311040	31311040	+	Intron	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22434366	22434366	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102316025	102316025	+	5'Flank	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20362681	20362681	+	5'Flank	SNP	A	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	76079149	76079149	+	5'Flank	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	18304300	18304300	+	5'Flank	DEL	C	-	-			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23309778	23309778	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146791827	146791827	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	237167616	237167617	+	RNA	DNP	GC	TT	TT			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133074832	133074832	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89265930	89265930	+	RNA	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89513367	89513367	+	Intron	SNP	G	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89952919	89952919	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90043627	90043627	+	Intron	SNP	C	G	G			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90044473	90044473	+	Intron	SNP	C	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90049738	90049738	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69362415	69362415	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	150202015	150202015	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142168637	142168637	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73142759	73142759	+	Intron	SNP	T	A	A			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	100698763	100698763	+	Intron	SNP	G	T	T			TCGA-05-4405-01A-21D-1855-08	TCGA-05-4405-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
