Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
RPS6KA1	6195	broad.mit.edu	36	1	26758014	26758014	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	26758014	26758014	RPS6KA1	1	A	A	G	7
RPS6KA1	6195	broad.mit.edu	36	1	26770634	26770634	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	26770634	26770634	RPS6KA1	1	T	T	G	55
GJB4	127534	broad.mit.edu	36	1	34999784	34999784	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	34999784	34999784	GJB4	1	G	G	A	40
ZNF643	65243	broad.mit.edu	36	1	40701834	40701834	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	40701834	40701834	ZNF643	1	A	A	G	7
CYP4B1	1580	broad.mit.edu	36	1	47052562	47052562	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	47052562	47052562	CYP4B1	1	C	C	G	30
ADAMTSL4	54507	broad.mit.edu	36	1	148797711	148797711	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	148797711	148797711	ADAMTSL4	1	T	T	A	55
GNPAT	8443	broad.mit.edu	36	1	229477797	229477797	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	229477797	229477797	GNPAT	1	T	T	G	52
CNNM2	54805	broad.mit.edu	36	10	104669537	104669537	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	104669537	104669537	CNNM2	10	G	G	A	43
CCDC87	55231	broad.mit.edu	36	11	66116369	66116369	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	66116369	66116369	CCDC87	11	G	G	A	47
USP15	9958	broad.mit.edu	36	12	60994859	60994859	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	60994859	60994859	USP15	12	G	G	T	48
TMEM132D	121256	broad.mit.edu	36	12	128129077	128129077	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	128129077	128129077	TMEM132D	12	G	G	T	33
ARHGEF7	8874	broad.mit.edu	36	13	110733538	110733538	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	110733538	110733538	ARHGEF7	13	G	G	A	38
SEC23A	10484	broad.mit.edu	36	14	38606220	38606220	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	38606220	38606220	SEC23A	14	T	T	C	57
FAM164C	79696	broad.mit.edu	36	14	74607132	74607132	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	74607132	74607132	FAM164C	14	T	T	A	61
CHRNA5	1138	broad.mit.edu	36	15	76667716	76667716	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	76667716	76667716	CHRNA5	15	G	G	C	41
TP53	7157	broad.mit.edu	36	17	7519095	7519095	+	Splice_Site_SNP	SNP	C	C	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	7519095	7519095	TP53	17	C	C	T	18
CCDC40	55036	broad.mit.edu	36	17	75678253	75678254	+	Missense_Mutation	DNP	TG	TG	AC	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	DNP	75678253	75678254	CCDC40	17	TG	TG	AC	51
MPND	84954	broad.mit.edu	36	19	4306115	4306115	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	4306115	4306115	MPND	19	T	T	G	62
PTPRS	5802	broad.mit.edu	36	19	5165445	5165445	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	5165445	5165445	PTPRS	19	C	C	A	26
ANO8	57719	broad.mit.edu	36	19	17296810	17296810	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	17296810	17296810	ANO8	19	C	C	A	26
ZNF208	7757	broad.mit.edu	36	19	21947946	21947946	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	21947946	21947946	ZNF208	19	A	A	C	14
ZNF529	57711	broad.mit.edu	36	19	41730515	41730515	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	41730515	41730515	ZNF529	19	G	G	A	44
PRKD2	25865	broad.mit.edu	36	19	51899265	51899265	+	Splice_Site_SNP	SNP	C	C	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	51899265	51899265	PRKD2	19	C	C	G	18
PLEKHA4	57664	broad.mit.edu	36	19	54036374	54036374	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	54036374	54036374	PLEKHA4	19	C	C	T	23
CPT1C	126129	broad.mit.edu	36	19	54905876	54905876	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	54905876	54905876	CPT1C	19	A	A	G	6
BIRC6	57448	broad.mit.edu	36	2	32624379	32624379	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	32624379	32624379	BIRC6	2	C	C	T	28
MRPS5	64969	broad.mit.edu	36	2	95144607	95144607	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	95144607	95144607	MRPS5	2	G	G	A	48
TMEM131	23505	broad.mit.edu	36	2	97795420	97795420	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	97795420	97795420	TMEM131	2	C	C	A	32
GLI2	2736	broad.mit.edu	36	2	121425309	121425309	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	121425309	121425309	GLI2	2	G	G	A	34
MOBKL3	25843	broad.mit.edu	36	2	198089100	198089100	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	198089100	198089100	MOBKL3	2	G	G	A	39
BCS1L	617	broad.mit.edu	36	2	219236179	219236179	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	219236179	219236179	BCS1L	2	C	C	G	22
FBXO36	130888	broad.mit.edu	36	2	230583769	230583769	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	230583769	230583769	FBXO36	2	C	C	A	21
PLCB1	23236	broad.mit.edu	36	20	8665739	8665739	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	8665739	8665739	PLCB1	20	G	G	C	44
PCNT	5116	broad.mit.edu	36	21	46590524	46590524	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	46590524	46590524	PCNT	21	G	G	T	33
PCNT	5116	broad.mit.edu	36	21	46591329	46591329	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	46591329	46591329	PCNT	21	G	G	T	41
APOBEC3A	200315	broad.mit.edu	36	22	37683664	37683664	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	37683664	37683664	APOBEC3A	22	G	G	A	39
C3orf63	23272	broad.mit.edu	36	3	56642329	56642329	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	56642329	56642329	C3orf63	3	A	A	G	4
ARHGEF3	50650	broad.mit.edu	36	3	56746316	56746316	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	56746316	56746316	ARHGEF3	3	G	G	C	36
PRICKLE2	166336	broad.mit.edu	36	3	64060310	64060310	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	64060310	64060310	PRICKLE2	3	G	G	T	47
CHST2	9435	broad.mit.edu	36	3	144323842	144323842	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	144323842	144323842	CHST2	3	T	T	A	64
GMPS	8833	broad.mit.edu	36	3	157116538	157116538	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	157116538	157116538	GMPS	3	C	C	G	18
ENAM	10117	broad.mit.edu	36	4	71727058	71727058	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	71727058	71727058	ENAM	4	A	A	G	7
ZNF622	90441	broad.mit.edu	36	5	16504862	16504862	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	16504862	16504862	ZNF622	5	C	C	T	20
TRIM23	373	broad.mit.edu	36	5	64928093	64928093	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	64928093	64928093	TRIM23	5	T	T	G	62
SERINC5	256987	broad.mit.edu	36	5	79482464	79482464	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	79482464	79482464	SERINC5	5	C	C	A	21
RASGRF2	5924	broad.mit.edu	36	5	80445146	80445146	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	80445146	80445146	RASGRF2	5	C	C	A	17
VCAN	1462	broad.mit.edu	36	5	82873282	82873282	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	82873282	82873282	VCAN	5	G	G	C	33
RIOK1	83732	broad.mit.edu	36	6	7340356	7340356	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	7340356	7340356	RIOK1	6	T	T	C	63
VEGFA	7422	broad.mit.edu	36	6	43854193	43854193	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	43854193	43854193	VEGFA	6	C	C	T	29
TSPAN33	340348	broad.mit.edu	36	7	128593914	128593914	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	128593914	128593914	TSPAN33	7	C	C	G	28
AGK	55750	broad.mit.edu	36	7	140961779	140961779	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	140961779	140961779	AGK	7	G	G	A	43
CYP7A1	1581	broad.mit.edu	36	8	59566702	59566702	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	59566702	59566702	CYP7A1	8	C	C	G	21
HNF4G	3174	broad.mit.edu	36	8	76638801	76638801	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	76638801	76638801	HNF4G	8	G	G	A	42
NDRG1	10397	broad.mit.edu	36	8	134329302	134329302	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	134329302	134329302	NDRG1	8	C	C	T	19
DDX58	23586	broad.mit.edu	36	9	32475257	32475257	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	32475257	32475257	DDX58	9	G	G	A	40
KIF24	347240	broad.mit.edu	36	9	34247626	34247626	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	34247626	34247626	KIF24	9	T	T	C	64
ACE2	59272	broad.mit.edu	36	X	15506329	15506329	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	15506329	15506329	ACE2	23	G	G	A	40
MAGEB6	158809	broad.mit.edu	36	X	26122301	26122301	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	26122301	26122301	MAGEB6	23	C	C	A	22
DMD	1756	broad.mit.edu	36	X	31075451	31075451	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	31075451	31075451	DMD	23	G	G	T	43
PSMD10	5716	broad.mit.edu	36	X	107214958	107214958	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	107214958	107214958	PSMD10	23	C	C	T	24
ZNF280C	55609	broad.mit.edu	36	X	129205285	129205285	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	129205285	129205285	ZNF280C	23	G	G	A	37
FLNA	2316	broad.mit.edu	36	X	153246510	153246511	+	Missense_Mutation	DNP	TT	TT	CC	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	DNP	153246510	153246511	FLNA	23	TT	TT	CC	56
TRPV2	51393	broad.mit.edu	36	17	16276091	16276092	+	Frame_Shift_Ins	INS	-	A	-	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Ins	INS	16276091	16276092	TRPV2	17	-	A	-	17
OR4F21	441308	broad.mit.edu	36	8	106893	106894	+	Frame_Shift_Del	DEL	GA	-	GA	novel	Unknown	TCGA-24-2030-01	TCGA-24-2030-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Del	DEL	106893	106894	OR4F21	8	GA	-	GA	45
