Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2ML1	144568	broad.mit.edu	37	12	8976535	8976535	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	8976535	8976535	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	8976535	8976535	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAGAB	79719	broad.mit.edu	37	15	67500916	67500916	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAGAB	79719	broad.mit.edu	37	15	67500916	67500916	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA17P	650655	broad.mit.edu	37	16	2474240	2474240	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA17P	650655	broad.mit.edu	37	16	2474240	2474240	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA17P	650655	broad.mit.edu	37	16	2474240	2474240	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107558537	107558537	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107558537	107558537	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107558537	107558537	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67102211	67102211	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67102211	67102211	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67102211	67102211	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66913418	66913418	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66913418	66913418	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66913418	66913418	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67020350	67020350	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67023742	67023742	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67020350	67020350	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67023742	67023742	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67020350	67020350	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48218287	48218287	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48218287	48218287	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48218287	48218287	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG1	9619	broad.mit.edu	37	21	43706025	43706025	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG1	9619	broad.mit.edu	37	21	43706025	43706025	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG1	9619	broad.mit.edu	37	21	43706025	43706025	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABTB2	25841	broad.mit.edu	37	11	34356869	34356869	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABTB2	25841	broad.mit.edu	37	11	34356869	34356869	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABTB2	25841	broad.mit.edu	37	11	34356869	34356869	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35641900	35641900	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35641900	35641900	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35641900	35641900	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220397143	220397143	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220397143	220397143	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220397143	220397143	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER2	340485	broad.mit.edu	37	9	19424744	19424744	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER2	340485	broad.mit.edu	37	9	19424744	19424744	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER2	340485	broad.mit.edu	37	9	19424744	19424744	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSF3	197322	broad.mit.edu	37	16	89169203	89169203	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSF3	197322	broad.mit.edu	37	16	89169203	89169203	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSF3	197322	broad.mit.edu	37	16	89169203	89169203	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL5	51703	broad.mit.edu	37	10	114170209	114170209	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL5	51703	broad.mit.edu	37	10	114170209	114170209	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL5	51703	broad.mit.edu	37	10	114170209	114170209	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20422712	20422712	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20429361	20429361	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20448781	20448781	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20422712	20422712	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20429361	20429361	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20448781	20448781	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20429361	20429361	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR8	93973	broad.mit.edu	37	3	53906142	53906142	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR8	93973	broad.mit.edu	37	3	53906142	53906142	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1	90	broad.mit.edu	37	2	158637227	158637227	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156991273	156991273	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156991273	156991273	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156991273	156991273	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207454282	207454282	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207457278	207457278	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207454282	207454282	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207457278	207457278	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207454282	207454282	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207457278	207457278	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106667813	106667813	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106744036	106744036	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106089690	106089690	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106667813	106667813	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106744036	106744036	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106667813	106667813	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106744036	106744036	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33662191	33662191	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33662191	33662191	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33662191	33662191	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77323148	77323148	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77318093	77318093	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77323148	77323148	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77323148	77323148	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	128862065	128862065	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	128862065	128862065	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	128862065	128862065	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	128990178	128990178	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43777518	43777518	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43926034	43926035	+	Intron	DEL	AC	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43777518	43777518	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43926034	43926035	+	Intron	DEL	AC	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43777518	43777518	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43926034	43926035	+	Intron	DEL	AC	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161165312	161165312	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161165312	161165312	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161165312	161165312	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7698359	7698359	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7698359	7698359	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7698359	7698359	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY4	196883	broad.mit.edu	37	14	24791241	24791241	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY4	196883	broad.mit.edu	37	14	24791241	24791241	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY4	196883	broad.mit.edu	37	14	24791241	24791241	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31121311	31121311	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31121311	31121311	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31121311	31121311	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100232649	100232649	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100232649	100232649	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100232649	100232649	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPRH	141	broad.mit.edu	37	3	119306729	119306729	+	3'UTR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPRH	141	broad.mit.edu	37	3	119306729	119306729	+	3'UTR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPRH	141	broad.mit.edu	37	3	119306729	119306729	+	3'UTR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1B	147	broad.mit.edu	37	5	159377796	159377796	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147744265	147744265	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147967677	147967677	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147744265	147744265	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP5	729092	broad.mit.edu	37	10	75435611	75435611	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP5	729092	broad.mit.edu	37	10	75435611	75435611	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP5	729092	broad.mit.edu	37	10	75435611	75435611	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	49119143	49119143	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135611635	135611635	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135611635	135611635	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135611635	135611635	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM2	9447	broad.mit.edu	37	1	159032630	159032630	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM2	9447	broad.mit.edu	37	1	159032630	159032630	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4829866	4829866	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4829866	4829866	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4829866	4829866	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP1	8165	broad.mit.edu	37	17	55184111	55184111	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP1	8165	broad.mit.edu	37	17	55184111	55184111	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNAD1	254268	broad.mit.edu	37	1	109366318	109366318	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNAD1	254268	broad.mit.edu	37	1	109366318	109366318	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNAD1	254268	broad.mit.edu	37	1	109366318	109366318	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG2	85365	broad.mit.edu	37	9	101984539	101984539	+	5'Flank	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG2	85365	broad.mit.edu	37	9	101984539	101984539	+	5'Flank	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG2	85365	broad.mit.edu	37	9	101984539	101984539	+	5'Flank	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX12	239	broad.mit.edu	37	17	6901776	6901776	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX12	239	broad.mit.edu	37	17	6901776	6901776	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202215957	202215957	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202215957	202215957	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202215957	202215957	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202593558	202593561	+	Intron	DEL	AAAC	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112024171	112024171	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112024171	112024171	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112024171	112024171	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL1	23357	broad.mit.edu	37	14	77273815	77273815	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL1	23357	broad.mit.edu	37	14	77273815	77273815	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL1	23357	broad.mit.edu	37	14	77273815	77273815	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	869027	869027	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	869027	869027	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	869027	869027	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114279402	114279402	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114279402	114279402	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114279402	114279402	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190593280	190593280	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190593280	190593280	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190593280	190593280	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54543774	54543774	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54543774	54543774	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54543774	54543774	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14746065	14746065	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14746065	14746065	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14746065	14746065	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73950895	73950895	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73950895	73950895	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73950895	73950895	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27355419	27355419	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27355419	27355419	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27355419	27355419	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14851711	14851711	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14851711	14851711	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14851711	14851711	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45782068	45782068	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45782068	45782068	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45782068	45782068	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO7	50636	broad.mit.edu	37	2	242135098	242135098	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC3	8639	broad.mit.edu	37	17	41003966	41003966	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC3	8639	broad.mit.edu	37	17	41003966	41003966	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201480923	201480923	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201485714	201485714	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201480923	201480923	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201485714	201485714	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201485714	201485714	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB3	10307	broad.mit.edu	37	5	139942168	139942168	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3D	140564	broad.mit.edu	37	22	39428331	39428331	+	3'UTR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3D	140564	broad.mit.edu	37	22	39428331	39428331	+	3'UTR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3D	140564	broad.mit.edu	37	22	39428331	39428331	+	3'UTR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APRT	353	broad.mit.edu	37	16	88876676	88876681	+	Intron	DEL	TGAGCC	-	-	rs8191488		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP10	89872	broad.mit.edu	37	1	154296762	154296762	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP10	89872	broad.mit.edu	37	1	154296762	154296762	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP7P1	375719	broad.mit.edu	37	9	67273681	67273681	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAF	369	broad.mit.edu	37	X	47430612	47430617	+	Intron	DEL	GTGTGT	-	-	rs67867352	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGLU1	55082	broad.mit.edu	37	13	107211830	107211830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGLU1	55082	broad.mit.edu	37	13	107211830	107211830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGLU1	55082	broad.mit.edu	37	13	107211830	107211830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP11B	89839	broad.mit.edu	37	15	30927491	30927491	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP11B	89839	broad.mit.edu	37	15	30927491	30927491	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP11B	89839	broad.mit.edu	37	15	30927491	30927491	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69034445	69034445	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69034445	69034445	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69034445	69034445	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF15	22899	broad.mit.edu	37	17	8218585	8218585	+	Missense_Mutation	SNP	G	A	A	rs142119277	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF15	22899	broad.mit.edu	37	17	8218585	8218585	+	Missense_Mutation	SNP	G	A	A	rs142119277	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111896616	111896616	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111929984	111929984	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111896616	111896616	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111929984	111929984	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111896616	111896616	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111929984	111929984	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSA	410	broad.mit.edu	37	22	51064862	51064863	+	Intron	INS	-	C	C	rs151080451	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSD	414	broad.mit.edu	37	X	2832920	2832921	+	Intron	INS	-	TA	TA			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96795776	96795776	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96795776	96795776	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96799595	96799595	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96795776	96795776	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176913182	176913182	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176913182	176913182	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176913182	176913182	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119625743	119625743	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	120053826	120053826	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119625743	119625743	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	120053826	120053826	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	120053826	120053826	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31319721	31319721	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31319721	31319721	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96756654	96756654	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96756654	96756654	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138825775	138825775	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138879495	138879495	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138825775	138825775	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138879495	138879495	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138825775	138825775	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138879495	138879495	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25264879	25264879	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25283469	25283469	+	Intron	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25264879	25264879	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25283469	25283469	+	Intron	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25264879	25264879	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25283469	25283469	+	Intron	DEL	G	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160099833	160099833	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160099833	160099833	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160099833	160099833	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1G3	127124	broad.mit.edu	37	1	198509591	198509591	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1G3	127124	broad.mit.edu	37	1	198509591	198509591	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1G3	127124	broad.mit.edu	37	1	198509591	198509591	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1H	51606	broad.mit.edu	37	8	54727361	54727361	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1H	51606	broad.mit.edu	37	8	54727361	54727361	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1H	51606	broad.mit.edu	37	8	54727361	54727361	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26413589	26413589	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26413589	26413589	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26413589	26413589	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26542719	26542719	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154319215	154319215	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154319215	154319215	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154319215	154319215	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	116919709	116919709	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	116919709	116919709	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3470667	3470667	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3470667	3470667	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3470667	3470667	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142184085	142184085	+	Intron	DEL	A	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142188251	142188251	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142184085	142184085	+	Intron	DEL	A	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142188251	142188251	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142184085	142184085	+	Intron	DEL	A	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142188251	142188251	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT6	9331	broad.mit.edu	37	18	29207152	29207152	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT6	9331	broad.mit.edu	37	18	29207152	29207152	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69349249	69349249	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69349249	69349249	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69349249	69349249	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160239224	160239224	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160239224	160239224	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160239224	160239224	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBOX1	8424	broad.mit.edu	37	11	27076968	27076968	+	5'UTR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBOX1	8424	broad.mit.edu	37	11	27076968	27076968	+	5'UTR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBOX1	8424	broad.mit.edu	37	11	27076968	27076968	+	5'UTR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCHE	590	broad.mit.edu	37	3	165548428	165548428	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCHE	590	broad.mit.edu	37	3	165548428	165548428	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCHE	590	broad.mit.edu	37	3	165548428	165548428	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112089381	112089381	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST4	266675	broad.mit.edu	37	1	45253101	45253101	+	Nonsense_Mutation	SNP	G	A	A	rs138830699		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST4	266675	broad.mit.edu	37	1	45253101	45253101	+	Nonsense_Mutation	SNP	G	A	A	rs138830699		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST4	266675	broad.mit.edu	37	1	45253101	45253101	+	Nonsense_Mutation	SNP	G	A	A	rs138830699		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51717762	51717762	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51717762	51717762	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLOC1S1	2647	broad.mit.edu	37	12	56109844	56109844	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69093407	69093407	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69093407	69093407	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69093407	69093407	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55803104	55803104	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55803104	55803104	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43325942	43325942	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43325942	43325942	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43325942	43325942	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15536146	15536146	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15536146	15536146	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15536146	15536146	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOLA3	388962	broad.mit.edu	37	2	74369633	74369633	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31619551	31619551	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31619551	31619551	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31619551	31619551	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A1	11120	broad.mit.edu	37	6	26468562	26468562	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A1	11120	broad.mit.edu	37	6	26468562	26468562	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A1	11120	broad.mit.edu	37	6	26468562	26468562	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26390122	26390122	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26390122	26390122	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26390122	26390122	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111414782	111414782	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111414782	111414782	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124458145	124458145	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124458145	124458145	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124458145	124458145	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127429315	127429315	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127429315	127429315	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128118409	128118409	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128118409	128118409	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128118409	128118409	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33620595	33620595	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33620607	33620607	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33620595	33620595	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33620607	33620607	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33620595	33620595	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf45	219833	broad.mit.edu	37	11	128772478	128772478	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf45	219833	broad.mit.edu	37	11	128772478	128772478	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf61	79684	broad.mit.edu	37	11	124661076	124661076	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf61	79684	broad.mit.edu	37	11	124661076	124661076	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf9	745	broad.mit.edu	37	11	61551640	61551640	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf36	283422	broad.mit.edu	37	12	13529158	13529158	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf36	283422	broad.mit.edu	37	12	13529158	13529158	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf36	283422	broad.mit.edu	37	12	13529158	13529158	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf23	80209	broad.mit.edu	37	13	39608336	39608336	+	Intron	DEL	A	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf106	55320	broad.mit.edu	37	14	45675252	45675252	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf179	112752	broad.mit.edu	37	14	76524982	76524982	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf179	112752	broad.mit.edu	37	14	76524982	76524982	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf179	112752	broad.mit.edu	37	14	76524982	76524982	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95884113	95884113	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95910860	95910860	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95884113	95884113	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95910860	95910860	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95884113	95884113	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95910860	95910860	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf50	145376	broad.mit.edu	37	14	65032211	65032211	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf50	145376	broad.mit.edu	37	14	65032211	65032211	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf50	145376	broad.mit.edu	37	14	65032211	65032211	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923924	24923924	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923924	24923924	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923924	24923924	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf32	145858	broad.mit.edu	37	15	93015490	93015490	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf32	145858	broad.mit.edu	37	15	93015490	93015490	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf32	145858	broad.mit.edu	37	15	93015490	93015490	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90128938	90128938	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90128938	90128938	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90128938	90128938	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf63	123811	broad.mit.edu	37	16	15967411	15967411	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf63	123811	broad.mit.edu	37	16	15967411	15967411	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf63	123811	broad.mit.edu	37	16	15967411	15967411	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34185354	34185354	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34192287	34192287	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34185354	34185354	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34192287	34192287	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34185354	34185354	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf66	256957	broad.mit.edu	37	17	34192287	34192287	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30791950	30791950	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30903418	30903418	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30791950	30791950	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30903418	30903418	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30791950	30791950	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30903418	30903418	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf2	8725	broad.mit.edu	37	19	30505668	30505668	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf2	8725	broad.mit.edu	37	19	30505668	30505668	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf40	91442	broad.mit.edu	37	19	33464996	33464996	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf40	91442	broad.mit.edu	37	19	33464996	33464996	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf40	91442	broad.mit.edu	37	19	33464996	33464996	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172437600	172437600	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172437623	172437623	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172437600	172437600	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172437623	172437623	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172437600	172437600	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172437623	172437623	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57252989	57252989	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57252989	57252989	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57252989	57252989	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75055428	75055428	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75055641	75055641	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75139093	75139093	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75055428	75055428	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75055641	75055641	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75139093	75139093	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75055428	75055428	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75055641	75055641	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf226	400793	broad.mit.edu	37	1	162353098	162353098	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf226	400793	broad.mit.edu	37	1	162353098	162353098	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf226	400793	broad.mit.edu	37	1	162353098	162353098	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf9	51430	broad.mit.edu	37	1	172538332	172538332	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf9	51430	broad.mit.edu	37	1	172538332	172538332	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3295651	3295652	+	Intron	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3295651	3295652	+	Intron	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3295651	3295652	+	Intron	DNP	CC	AA	AA			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf3	57136	broad.mit.edu	37	20	24964571	24964571	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf3	57136	broad.mit.edu	37	20	24964571	24964571	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf3	57136	broad.mit.edu	37	20	24964571	24964571	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	46097383	46097383	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63349192	63349192	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63349192	63349192	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63349192	63349192	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf43	255798	broad.mit.edu	37	3	196241804	196241804	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf43	255798	broad.mit.edu	37	3	196241804	196241804	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf17	84103	broad.mit.edu	37	4	100451036	100451036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf17	84103	broad.mit.edu	37	4	100451036	100451036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf17	84103	broad.mit.edu	37	4	100451036	100451036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf36	132989	broad.mit.edu	37	4	87812520	87812520	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf36	132989	broad.mit.edu	37	4	87812520	87812520	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71020209	71020209	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71020209	71020209	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71020209	71020209	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47976742	47976742	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47976742	47976742	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47976742	47976742	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf27	80737	broad.mit.edu	37	6	31740879	31740879	+	Silent	SNP	G	A	A	rs146780305	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf27	80737	broad.mit.edu	37	6	31740879	31740879	+	Silent	SNP	G	A	A	rs146780305	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf27	80737	broad.mit.edu	37	6	31740879	31740879	+	Silent	SNP	G	A	A	rs146780305	byFrequency	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf35	729515	broad.mit.edu	37	6	157731874	157731874	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf46	340277	broad.mit.edu	37	7	23740598	23740598	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf46	340277	broad.mit.edu	37	7	23740598	23740598	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf66	154907	broad.mit.edu	37	7	108524469	108524469	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf66	154907	broad.mit.edu	37	7	108524469	108524469	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf66	154907	broad.mit.edu	37	7	108524469	108524469	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf79	57604	broad.mit.edu	37	8	12864024	12864024	+	Intron	SNP	G	A	A	rs148152224	by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf64	84267	broad.mit.edu	37	9	86559772	86559772	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf64	84267	broad.mit.edu	37	9	86559772	86559772	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf64	84267	broad.mit.edu	37	9	86559772	86559772	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA13	377677	broad.mit.edu	37	8	86142079	86142079	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA13	377677	broad.mit.edu	37	8	86142079	86142079	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1H	8912	broad.mit.edu	37	16	1270609	1270609	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1H	8912	broad.mit.edu	37	16	1270609	1270609	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81600959	81600959	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18630002	18630002	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18630002	18630002	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18630002	18630002	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPSL	133690	broad.mit.edu	37	5	35909945	35909945	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPSL	133690	broad.mit.edu	37	5	35909945	35909945	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPSL	133690	broad.mit.edu	37	5	35909945	35909945	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASKIN1	57524	broad.mit.edu	37	16	2237131	2237131	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASKIN1	57524	broad.mit.edu	37	16	2237131	2237131	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104819384	104819384	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104825538	104825538	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104819384	104819384	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104825538	104825538	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104819384	104819384	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104825538	104825538	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASS4	57091	broad.mit.edu	37	20	55012086	55012086	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASS4	57091	broad.mit.edu	37	20	55012086	55012086	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC147	159686	broad.mit.edu	37	10	106124511	106124511	+	Missense_Mutation	SNP	T	C	C	rs144185091	byFrequency;by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28A	25901	broad.mit.edu	37	6	139106400	139106400	+	Missense_Mutation	SNP	G	A	A	rs143442772		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28A	25901	broad.mit.edu	37	6	139106400	139106400	+	Missense_Mutation	SNP	G	A	A	rs143442772		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28A	25901	broad.mit.edu	37	6	139106400	139106400	+	Missense_Mutation	SNP	G	A	A	rs143442772		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180381801	180381801	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180381801	180381801	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180381801	180381801	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC46	201134	broad.mit.edu	37	17	63957643	63957643	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC55	84081	broad.mit.edu	37	17	28511912	28511912	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC57	284001	broad.mit.edu	37	17	80151915	80151915	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC57	284001	broad.mit.edu	37	17	80151915	80151915	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC57	284001	broad.mit.edu	37	17	80151915	80151915	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74A	90557	broad.mit.edu	37	2	132290385	132290385	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74A	90557	broad.mit.edu	37	2	132290385	132290385	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL14	6358	broad.mit.edu	37	17	34310883	34310883	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL14	6358	broad.mit.edu	37	17	34310883	34310883	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL14	6358	broad.mit.edu	37	17	34310883	34310883	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL3	6348	broad.mit.edu	37	17	34417481	34417481	+	5'UTR	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL3	6348	broad.mit.edu	37	17	34417481	34417481	+	5'UTR	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325684	158325684	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325684	158325684	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325684	158325684	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200R1	131450	broad.mit.edu	37	3	112648181	112648181	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200R1	131450	broad.mit.edu	37	3	112648181	112648181	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200R1	131450	broad.mit.edu	37	3	112648181	112648181	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24505369	24505370	+	Intron	DNP	GG	TT	TT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24509715	24509715	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24505369	24505370	+	Intron	DNP	GG	TT	TT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24509715	24509715	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24505369	24505370	+	Intron	DNP	GG	TT	TT			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24509715	24509715	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19721654	19721654	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19721654	19721654	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19721654	19721654	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59166451	59166451	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59166451	59166451	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59166451	59166451	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60428093	60428093	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60428093	60428093	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31305452	31305452	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31322949	31322949	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31305452	31305452	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31322949	31322949	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31305452	31305452	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31322949	31322949	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63547963	63547963	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63547963	63547963	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63547963	63547963	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF2	10659	broad.mit.edu	37	10	11047218	11047219	+	5'Flank	INS	-	GA	GA	rs68120130		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109812142	109812142	+	Silent	SNP	G	A	A	rs150014940		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109812142	109812142	+	Silent	SNP	G	A	A	rs150014940		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109812142	109812142	+	Silent	SNP	G	A	A	rs150014940		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196964820	196964820	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196964820	196964820	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196964820	196964820	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFI	3426	broad.mit.edu	37	4	110670479	110670479	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFI	3426	broad.mit.edu	37	4	110670479	110670479	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFI	3426	broad.mit.edu	37	4	110670479	110670479	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGNL1	84952	broad.mit.edu	37	15	57731244	57731244	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGNL1	84952	broad.mit.edu	37	15	57731244	57731244	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGNL1	84952	broad.mit.edu	37	15	57731244	57731244	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGRRF1	10668	broad.mit.edu	37	14	54997025	54997025	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGRRF1	10668	broad.mit.edu	37	14	54997025	54997025	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50833719	50833719	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93545281	93545281	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93545281	93545281	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93545281	93545281	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6697022	6697022	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6697022	6697022	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6697022	6697022	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21895652	21895652	+	Intron	SNP	A	G	G	rs12885609		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21899280	21899280	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53330938	53330938	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53330938	53330938	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53330938	53330938	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP2	63928	broad.mit.edu	37	16	23767571	23767571	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP2	63928	broad.mit.edu	37	16	23767571	23767571	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP2	63928	broad.mit.edu	37	16	23767571	23767571	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240072343	240072344	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240072343	240072344	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM3	1131	broad.mit.edu	37	1	240072343	240072344	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIRH1A	84916	broad.mit.edu	37	16	69196824	69196824	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIRH1A	84916	broad.mit.edu	37	16	69196824	69196824	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113518385	113518385	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113518385	113518385	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113518385	113518385	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46837632	46837633	+	Intron	DEL	CA	-	-	rs59649961		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC9A	283420	broad.mit.edu	37	12	10194219	10194219	+	Translation_Start_Site	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC9A	283420	broad.mit.edu	37	12	10194219	10194219	+	Translation_Start_Site	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC9A	283420	broad.mit.edu	37	12	10194219	10194219	+	Translation_Start_Site	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1	7401	broad.mit.edu	37	3	150644624	150644624	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1	7401	broad.mit.edu	37	3	150644624	150644624	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1	7401	broad.mit.edu	37	3	150644624	150644624	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN2	645104	broad.mit.edu	37	4	17524543	17524543	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN2	645104	broad.mit.edu	37	4	17524543	17524543	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN2	645104	broad.mit.edu	37	4	17524543	17524543	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN3	9746	broad.mit.edu	37	12	7290391	7290392	+	Intron	INS	-	GTGTGAGA	GTGTGAGA	rs28433214		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123384683	123384683	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123384698	123384698	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123384683	123384683	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123384698	123384698	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123384698	123384698	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNDP2	55748	broad.mit.edu	37	18	72179781	72179781	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNDP2	55748	broad.mit.edu	37	18	72179781	72179781	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNDP2	55748	broad.mit.edu	37	18	72179781	72179781	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6262724	6262724	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6262724	6262724	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6262724	6262724	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR3	154043	broad.mit.edu	37	6	154732033	154732033	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR3	154043	broad.mit.edu	37	6	154732033	154732033	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR3	154043	broad.mit.edu	37	6	154732033	154732033	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41318287	41318287	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41318287	41318287	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41318287	41318287	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74315674	74315674	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74315674	74315674	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74315674	74315674	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1367364	1367364	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1367364	1367364	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146741088	146741088	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146825920	146825920	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146741088	146741088	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146825920	146825920	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146741088	146741088	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146825920	146825920	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125555733	125555733	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125555733	125555733	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125232523	125232523	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125555733	125555733	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51096323	51096323	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51096323	51096323	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51096323	51096323	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	107013135	107013135	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	107013135	107013135	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	107013135	107013135	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103462563	103462563	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103462563	103462563	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33145298	33145298	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33145298	33145298	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33145298	33145298	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32163594	32163594	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32163594	32163594	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105832880	105832880	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105832880	105832880	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105832880	105832880	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46914426	46914426	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46914426	46914426	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139628254	139628254	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139767712	139767712	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139628254	139628254	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139767712	139767712	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139628254	139628254	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139767712	139767712	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86488678	86488678	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86375647	86375647	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86488678	86488678	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86375647	86375647	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86488678	86488678	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109784439	109784439	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109861854	109861854	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109784439	109784439	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109861854	109861854	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107418937	107418937	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107447623	107447623	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107418937	107418937	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107447623	107447623	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107418937	107418937	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107447623	107447623	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10096343	10096343	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10096343	10096343	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238234154	238234154	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238289824	238289824	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238234154	238234154	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238289824	238289824	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238234154	238234154	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238289824	238289824	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS7B	64708	broad.mit.edu	37	2	232672272	232672272	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE6	9362	broad.mit.edu	37	14	24543139	24543139	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE6	9362	broad.mit.edu	37	14	24543139	24543139	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE6	9362	broad.mit.edu	37	14	24543139	24543139	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR2	1380	broad.mit.edu	37	1	207644536	207644536	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR2	1380	broad.mit.edu	37	1	207644536	207644536	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR2	1380	broad.mit.edu	37	1	207644536	207644536	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB3	92359	broad.mit.edu	37	19	6466369	6466370	+	Intron	DEL	TG	-	-	rs141004533	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43907386	43907386	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43907386	43907386	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43907386	43907386	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1388758	1388788	+	Frame_Shift_Del	DEL	GCGGAGTGCCCGCCTGCTCACACGTGCCGAC	-	-	rs112233131	byFrequency;by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRLF1	9244	broad.mit.edu	37	19	18710582	18710582	+	Missense_Mutation	SNP	C	T	T	rs142326326		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5868515	5868515	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5868515	5868515	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5868515	5868515	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC1	23373	broad.mit.edu	37	19	18888280	18888280	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC1	23373	broad.mit.edu	37	19	18888280	18888280	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115267878	115267878	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115267878	115267878	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115267878	115267878	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149453163	149453163	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149453163	149453163	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149453163	149453163	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113304844	113304844	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113358492	113358492	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988108	113988108	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114111142	114111142	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113304844	113304844	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113358492	113358492	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988108	113988108	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114111142	114111142	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113304844	113304844	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113358492	113358492	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988108	113988108	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114111142	114111142	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1D	1453	broad.mit.edu	37	17	80223565	80223565	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1D	1453	broad.mit.edu	37	17	80223565	80223565	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1D	1453	broad.mit.edu	37	17	80223565	80223565	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF3	1479	broad.mit.edu	37	11	33118194	33118194	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF3	1479	broad.mit.edu	37	11	33129610	33129610	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF3	1479	broad.mit.edu	37	11	33129610	33129610	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11159645	11159645	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11159645	11159645	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11159645	11159645	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSC	1075	broad.mit.edu	37	11	88027474	88027474	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSC	1075	broad.mit.edu	37	11	88027474	88027474	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSC	1075	broad.mit.edu	37	11	88027474	88027474	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL12	6387	broad.mit.edu	37	10	44868746	44868746	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL12	6387	broad.mit.edu	37	10	44868746	44868746	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5R1	51706	broad.mit.edu	37	1	202933872	202933872	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYC1	1537	broad.mit.edu	37	8	145151666	145151692	+	Intron	DEL	GGCAGTGGGCATGTGGAATACTTCTCC	-	-	rs75325545		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F2	8529	broad.mit.edu	37	19	16003139	16003139	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F2	8529	broad.mit.edu	37	19	16003139	16003139	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F2	8529	broad.mit.edu	37	19	16003139	16003139	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYYR1	116159	broad.mit.edu	37	21	27945230	27945230	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYYR1	116159	broad.mit.edu	37	21	27945230	27945230	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYYR1	116159	broad.mit.edu	37	21	27945230	27945230	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
D2HGDH	728294	broad.mit.edu	37	2	242682045	242682045	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
D2HGDH	728294	broad.mit.edu	37	2	242682045	242682045	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39846148	39846148	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85415503	85415503	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109281146	109281146	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109281146	109281146	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109281146	109281146	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC2	51473	broad.mit.edu	37	6	24205177	24205178	+	Intron	INS	-	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95121061	95121061	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95121061	95121061	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95121061	95121061	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110654246	110654246	+	5'UTR	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110654246	110654246	+	5'UTR	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110654246	110654246	+	5'UTR	DEL	C	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50560624	50560624	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50560624	50560624	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50560624	50560624	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX11	1663	broad.mit.edu	37	12	31237922	31237922	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX11	1663	broad.mit.edu	37	12	31253967	31253967	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX11	1663	broad.mit.edu	37	12	31253967	31253967	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX11	1663	broad.mit.edu	37	12	31253967	31253967	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX41	51428	broad.mit.edu	37	5	176939771	176939771	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX49	54555	broad.mit.edu	37	19	19033223	19033223	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX49	54555	broad.mit.edu	37	19	19033223	19033223	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1C	79958	broad.mit.edu	37	19	6479183	6479183	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1C	79958	broad.mit.edu	37	19	6479183	6479183	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DERL1	79139	broad.mit.edu	37	8	124033690	124033690	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DERL1	79139	broad.mit.edu	37	8	124033690	124033690	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DERL1	79139	broad.mit.edu	37	8	124033690	124033690	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137257503	137257503	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137308320	137308320	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137257503	137257503	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137308320	137308320	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137341037	137341037	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137257503	137257503	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137308320	137308320	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2209645	2209645	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2209645	2209645	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2209645	2209645	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHTKD1	55526	broad.mit.edu	37	10	12136268	12136268	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHTKD1	55526	broad.mit.edu	37	10	12136268	12136268	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHTKD1	55526	broad.mit.edu	37	10	12136268	12136268	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX32	55760	broad.mit.edu	37	10	127569217	127569217	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX32	55760	broad.mit.edu	37	10	127569217	127569217	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX32	55760	broad.mit.edu	37	10	127569217	127569217	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60667825	60667826	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60667825	60667826	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60667825	60667826	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	436351	436351	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	436351	436351	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	436351	436351	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1497613	1497613	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1497613	1497613	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1497613	1497613	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1513959	1513959	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMC1	11144	broad.mit.edu	37	22	38933511	38933511	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMC1	11144	broad.mit.edu	37	22	38933511	38933511	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32381102	32381102	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32381102	32381102	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTA2	63950	broad.mit.edu	37	1	50885024	50885024	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTA2	63950	broad.mit.edu	37	1	50885024	50885024	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTA2	63950	broad.mit.edu	37	1	50885024	50885024	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52430796	52430796	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52430796	52430796	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52430796	52430796	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7734558	7734558	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7734558	7734558	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196659326	196659326	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196659326	196659326	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196659326	196659326	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196859146	196859146	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11514989	11514989	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11520764	11520764	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11532617	11532617	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11514989	11514989	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11520764	11520764	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11532617	11532617	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11514989	11514989	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11520764	11520764	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72297289	72297289	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72297289	72297289	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72297289	72297289	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB6	10049	broad.mit.edu	37	7	157208654	157208654	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB6	10049	broad.mit.edu	37	7	157208654	157208654	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB6	10049	broad.mit.edu	37	7	157208654	157208654	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31383626	31383626	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31383626	31383626	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94344789	94344789	+	5'Flank	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94344789	94344789	+	5'Flank	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169506137	169506137	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169506137	169506137	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169506137	169506137	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP2	64174	broad.mit.edu	37	16	68021439	68021439	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP2	64174	broad.mit.edu	37	16	68021439	68021439	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP2	64174	broad.mit.edu	37	16	68021439	68021439	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154684104	154684104	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154684208	154684208	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154684104	154684104	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154684104	154684104	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28604459	28604459	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28604459	28604459	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28604459	28604459	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117303986	117303986	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117303986	117303986	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117303986	117303986	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205116682	205116682	+	3'UTR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205117243	205117243	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205116682	205116682	+	3'UTR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205117243	205117243	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205116682	205116682	+	3'UTR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205117243	205117243	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	350736	350736	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	350736	350736	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167088532	167088532	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP6	1848	broad.mit.edu	37	12	89743161	89743161	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP6	1848	broad.mit.edu	37	12	89743161	89743161	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP6	1848	broad.mit.edu	37	12	89743161	89743161	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYDC2	84332	broad.mit.edu	37	10	82122230	82122230	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYDC2	84332	broad.mit.edu	37	10	82122230	82122230	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYDC2	84332	broad.mit.edu	37	10	82122230	82122230	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102494030	102494031	+	In_Frame_Ins	INS	-	CTG	CTG			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102494030	102494031	+	In_Frame_Ins	INS	-	CTG	CTG			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102494030	102494031	+	In_Frame_Ins	INS	-	CTG	CTG			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2LI1	51626	broad.mit.edu	37	2	44001177	44001177	+	5'Flank	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2LI1	51626	broad.mit.edu	37	2	44001177	44001177	+	5'Flank	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71762081	71762081	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96276960	96276961	+	Intron	DNP	CC	AT	AT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96276960	96276961	+	Intron	DNP	CC	AT	AT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECEL1	9427	broad.mit.edu	37	2	233347416	233347416	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECEL1	9427	broad.mit.edu	37	2	233347416	233347416	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1DP3	196549	broad.mit.edu	37	13	32527507	32527508	+	RNA	DEL	GT	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEFSEC	60678	broad.mit.edu	37	3	127981081	127981081	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEFSEC	60678	broad.mit.edu	37	3	127981081	127981081	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEFSEC	60678	broad.mit.edu	37	3	127981081	127981081	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD2	9343	broad.mit.edu	37	17	42931058	42931058	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD2	9343	broad.mit.edu	37	17	42931058	42931058	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD2	9343	broad.mit.edu	37	17	42931058	42931058	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55232939	55232939	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55232939	55232939	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55232939	55232939	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK2	5610	broad.mit.edu	37	2	37374158	37374158	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK2	5610	broad.mit.edu	37	2	37374158	37374158	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK2	5610	broad.mit.edu	37	2	37374158	37374158	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186502525	186502525	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186502525	186502525	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186502525	186502525	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6897298	6897298	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6897298	6897298	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6897298	6897298	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132196789	132196789	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132203406	132203406	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132196789	132196789	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132203406	132203406	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132203406	132203406	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP7	339221	broad.mit.edu	37	17	77710992	77710992	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222428583	222428583	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222428583	222428583	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222428583	222428583	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706286	96706286	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97367040	97367040	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706286	96706286	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97367040	97367040	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706286	96706286	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220145627	220145627	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220145627	220145627	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110300684	110300684	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110300684	110300684	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110300684	110300684	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37864639	37864639	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37864639	37864639	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37864639	37864639	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERO1LB	56605	broad.mit.edu	37	1	236384244	236384244	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERO1LB	56605	broad.mit.edu	37	1	236384244	236384244	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERO1LB	56605	broad.mit.edu	37	1	236384244	236384244	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESD	2098	broad.mit.edu	37	13	47354087	47354087	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESD	2098	broad.mit.edu	37	13	47354087	47354087	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESD	2098	broad.mit.edu	37	13	47354087	47354087	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPL	2125	broad.mit.edu	37	17	74019327	74019327	+	Intron	SNP	C	T	T	rs115238064	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPL	2125	broad.mit.edu	37	17	74019327	74019327	+	Intron	SNP	C	T	T	rs115238064	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPL	2125	broad.mit.edu	37	17	74019327	74019327	+	Intron	SNP	C	T	T	rs115238064	by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX1	2128	broad.mit.edu	37	7	27284629	27284629	+	Intron	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX1	2128	broad.mit.edu	37	7	27284629	27284629	+	Intron	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX1	2128	broad.mit.edu	37	7	27284629	27284629	+	Intron	DEL	G	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6224933	6224933	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6224933	6224933	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107A	11170	broad.mit.edu	37	3	58555486	58555486	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107A	11170	broad.mit.edu	37	3	58555486	58555486	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107A	11170	broad.mit.edu	37	3	58555486	58555486	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM124B	79843	broad.mit.edu	37	2	225266018	225266018	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM124B	79843	broad.mit.edu	37	2	225266018	225266018	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM124B	79843	broad.mit.edu	37	2	225266018	225266018	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17664237	17664237	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17664237	17664237	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17664237	17664237	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139380193	139380193	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM161A	84140	broad.mit.edu	37	2	62080893	62080893	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM161A	84140	broad.mit.edu	37	2	62080893	62080893	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM163A	148753	broad.mit.edu	37	1	179782940	179782940	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM163A	148753	broad.mit.edu	37	1	179782940	179782940	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM163A	148753	broad.mit.edu	37	1	179782940	179782940	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15325952	15325952	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15325952	15325952	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15325952	15325952	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189A1	23359	broad.mit.edu	37	15	29674805	29674805	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150377865	150377865	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150377865	150377865	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150377865	150377865	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM27L	284123	broad.mit.edu	37	17	21825370	21825370	+	RNA	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM27L	284123	broad.mit.edu	37	17	21825370	21825370	+	RNA	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10677740	10677740	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10677740	10677740	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10677740	10677740	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM40B	57464	broad.mit.edu	37	7	129083781	129083781	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM40B	57464	broad.mit.edu	37	7	129083781	129083781	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177250580	177250580	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177250580	177250580	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177250580	177250580	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A5	727905	broad.mit.edu	37	9	65508101	65508101	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A5	727905	broad.mit.edu	37	9	65508135	65508135	+	Splice_Site	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A5	727905	broad.mit.edu	37	9	65508101	65508101	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A5	727905	broad.mit.edu	37	9	65508135	65508135	+	Splice_Site	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A5	727905	broad.mit.edu	37	9	65508135	65508135	+	Splice_Site	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM76A	199870	broad.mit.edu	37	1	28060854	28060854	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54805781	54805781	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54805781	54805781	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54805781	54805781	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM86D	692099	broad.mit.edu	37	3	75475783	75475783	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10088407	10088410	+	Splice_Site	DEL	AGTA	-	-	rs146316187		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANK1	92565	broad.mit.edu	37	10	127685120	127685120	+	Missense_Mutation	SNP	C	T	T	rs141545587		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANK1	92565	broad.mit.edu	37	10	127685120	127685120	+	Missense_Mutation	SNP	C	T	T	rs141545587		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANK1	92565	broad.mit.edu	37	10	127685120	127685120	+	Missense_Mutation	SNP	C	T	T	rs141545587		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASLG	356	broad.mit.edu	37	1	172628515	172628515	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187518096	187518096	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92495401	92495401	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531802	92531802	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92573952	92573952	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92495401	92495401	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531802	92531802	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92573952	92573952	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92495401	92495401	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531802	92531802	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92573952	92573952	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126328260	126328260	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126367708	126367708	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126328260	126328260	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126367708	126367708	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126328260	126328260	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126367708	126367708	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FATE1	89885	broad.mit.edu	37	X	150889897	150889897	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FATE1	89885	broad.mit.edu	37	X	150889897	150889897	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FATE1	89885	broad.mit.edu	37	X	150889897	150889897	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127727777	127727777	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127727777	127727777	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127727777	127727777	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO40	51725	broad.mit.edu	37	3	121341414	121341414	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO40	51725	broad.mit.edu	37	3	121341414	121341414	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO40	51725	broad.mit.edu	37	3	121341414	121341414	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111749878	111749878	+	5'UTR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111749878	111749878	+	5'UTR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124985647	124985647	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125078958	125078958	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124985647	124985647	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125078958	125078958	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124985647	124985647	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102375360	102375360	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102375360	102375360	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102375360	102375360	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF5	2250	broad.mit.edu	37	4	81207742	81207742	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF5	2250	broad.mit.edu	37	4	81207742	81207742	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF5	2250	broad.mit.edu	37	4	81207742	81207742	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34324149	34324149	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34324149	34324149	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34324149	34324149	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286758	152286758	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286758	152286758	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286758	152286758	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ40330	645784	broad.mit.edu	37	2	89082293	89082294	+	Intron	INS	-	ATTT	ATTT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLVCR2	55640	broad.mit.edu	37	14	76108196	76108196	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLVCR2	55640	broad.mit.edu	37	14	76108196	76108196	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLVCR2	55640	broad.mit.edu	37	14	76108196	76108196	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240370500	240370500	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240370500	240370500	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240370500	240370500	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146675291	146675291	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146675291	146675291	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146675291	146675291	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159654335	159654335	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159654335	159654335	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159635923	159635923	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159654335	159654335	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXK2	3607	broad.mit.edu	37	17	80544151	80544151	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114284743	114284743	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114284743	114284743	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114284743	114284743	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXS1	2307	broad.mit.edu	37	20	30433405	30433405	+	5'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXS1	2307	broad.mit.edu	37	20	30433405	30433405	+	5'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32776200	32776200	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32776200	32776200	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32776200	32776200	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRZB	2487	broad.mit.edu	37	2	183723563	183723563	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRZB	2487	broad.mit.edu	37	2	183702971	183702971	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRZB	2487	broad.mit.edu	37	2	183723563	183723563	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRZB	2487	broad.mit.edu	37	2	183723563	183723563	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162431521	162431521	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101216375	101216375	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101216375	101216375	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101216375	101216375	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRD	2563	broad.mit.edu	37	1	1960912	1960912	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRD	2563	broad.mit.edu	37	1	1960912	1960912	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GADD45GIP1	90480	broad.mit.edu	37	19	13067598	13067598	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GADD45GIP1	90480	broad.mit.edu	37	19	13067598	13067598	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88420461	88420461	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88420461	88420461	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88420461	88420461	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT3	2591	broad.mit.edu	37	2	166605225	166605225	+	3'UTR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT7	51809	broad.mit.edu	37	4	174219404	174219404	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT7	51809	broad.mit.edu	37	4	174219404	174219404	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT7	51809	broad.mit.edu	37	4	174219404	174219404	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCOM1	145781	broad.mit.edu	37	15	57976597	57976597	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCOM1	145781	broad.mit.edu	37	15	57976597	57976597	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCOM1	145781	broad.mit.edu	37	15	57976597	57976597	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72634043	72634043	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72634043	72634043	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72634043	72634043	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF5	8200	broad.mit.edu	37	20	34021748	34021748	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF5	8200	broad.mit.edu	37	20	34021748	34021748	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF5	8200	broad.mit.edu	37	20	34021748	34021748	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58006692	58006692	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58006692	58006692	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58006692	58006692	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFAP	2670	broad.mit.edu	37	17	42990862	42990862	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFAP	2670	broad.mit.edu	37	17	42990862	42990862	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFI1	2672	broad.mit.edu	37	1	92948493	92948493	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFI1	2672	broad.mit.edu	37	1	92948493	92948493	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFI1	2672	broad.mit.edu	37	1	92948493	92948493	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT1	2673	broad.mit.edu	37	2	69556903	69556903	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT1	2673	broad.mit.edu	37	2	69556903	69556903	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT1	2673	broad.mit.edu	37	2	69556903	69556903	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA3	2676	broad.mit.edu	37	5	137593429	137593429	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA3	2676	broad.mit.edu	37	5	137593429	137593429	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA3	2676	broad.mit.edu	37	5	137593429	137593429	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55223728	55223728	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55223728	55223728	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55223728	55223728	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHDC	84514	broad.mit.edu	37	17	40344425	40344425	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHDC	84514	broad.mit.edu	37	17	40344425	40344425	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHDC	84514	broad.mit.edu	37	17	40344425	40344425	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42629109	42629109	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42629109	42629109	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42629109	42629109	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59611611	59611611	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59611611	59611611	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59611611	59611611	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP8	155038	broad.mit.edu	37	7	150164231	150164231	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57864243	57864243	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57864243	57864243	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57864243	57864243	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121726405	121726405	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121726405	121726405	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9792900	9792900	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9792900	9792900	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9792900	9792900	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183933016	183933016	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183933016	183933016	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183933016	183933016	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19749278	19749278	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19749278	19749278	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNA13	10672	broad.mit.edu	37	17	63010527	63010527	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNA13	10672	broad.mit.edu	37	17	63010527	63010527	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNA13	10672	broad.mit.edu	37	17	63010527	63010527	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11825092	11825092	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11825092	11825092	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11747117	11747117	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11825092	11825092	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8F	100132565	broad.mit.edu	37	15	28632830	28632830	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8F	100132565	broad.mit.edu	37	15	28632830	28632830	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8F	100132565	broad.mit.edu	37	15	28632830	28632830	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121447980	121447980	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121447980	121447980	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121447980	121447980	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPBP1L1	60313	broad.mit.edu	37	1	46105726	46105726	+	Intron	DEL	A	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94482465	94482465	+	Silent	SNP	G	T	T	rs149069159		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94482465	94482465	+	Silent	SNP	G	T	T	rs149069159		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94482465	94482465	+	Silent	SNP	G	T	T	rs149069159		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135438316	135438316	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135438316	135438316	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135438316	135438316	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR126	57211	broad.mit.edu	37	6	142759325	142759325	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR126	57211	broad.mit.edu	37	6	142759325	142759325	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR12	2835	broad.mit.edu	37	13	27333529	27333529	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR12	2835	broad.mit.edu	37	13	27333529	27333529	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR12	2835	broad.mit.edu	37	13	27333529	27333529	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR61	83873	broad.mit.edu	37	1	110086511	110086511	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR61	83873	broad.mit.edu	37	1	110086511	110086511	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR61	83873	broad.mit.edu	37	1	110086511	110086511	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRASP2	114928	broad.mit.edu	37	X	101972152	101972152	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRASP2	114928	broad.mit.edu	37	X	101972152	101972152	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRASP2	114928	broad.mit.edu	37	X	101972152	101972152	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87596613	87596613	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94159624	94159624	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94436452	94436452	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94159624	94159624	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94436452	94436452	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94159624	94159624	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94436452	94436452	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121212201	121212201	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121212201	121212201	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121212201	121212201	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7348280	7348280	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7348280	7348280	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7348280	7348280	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C2	2976	broad.mit.edu	37	2	27551677	27551677	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C2	2976	broad.mit.edu	37	2	27551677	27551677	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C2	2976	broad.mit.edu	37	2	27551677	27551677	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYS2	2998	broad.mit.edu	37	12	21713354	21713354	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYS2	2998	broad.mit.edu	37	12	21713354	21713354	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYS2	2998	broad.mit.edu	37	12	21713354	21713354	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2BFWT	158983	broad.mit.edu	37	X	103267765	103267765	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2BFWT	158983	broad.mit.edu	37	X	103267765	103267765	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2BFWT	158983	broad.mit.edu	37	X	103267765	103267765	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS1	115106	broad.mit.edu	37	18	43698346	43698346	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS1	115106	broad.mit.edu	37	18	43698346	43698346	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS1	115106	broad.mit.edu	37	18	43698346	43698346	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBD	3045	broad.mit.edu	37	11	5254211	5254211	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBD	3045	broad.mit.edu	37	11	5254211	5254211	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBD	3045	broad.mit.edu	37	11	5254211	5254211	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55039688	55039688	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCST	10870	broad.mit.edu	37	19	36393498	36393498	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCST	10870	broad.mit.edu	37	19	36393498	36393498	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCST	10870	broad.mit.edu	37	19	36393498	36393498	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDHD2	84064	broad.mit.edu	37	18	44656797	44656797	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR4	399671	broad.mit.edu	37	14	73945268	73945268	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR4	399671	broad.mit.edu	37	14	73945268	73945268	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR4	399671	broad.mit.edu	37	14	73945268	73945268	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	40998817	40998817	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65147079	65147079	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65147079	65147079	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65147079	65147079	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63991321	63991321	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63991321	63991321	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28483346	28483346	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28483346	28483346	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28482072	28482072	+	Intron	SNP	T	A	A	rs4035913		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28483346	28483346	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HES1	3280	broad.mit.edu	37	3	193854166	193854166	+	5'UTR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEYL	26508	broad.mit.edu	37	1	40098205	40098205	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEYL	26508	broad.mit.edu	37	1	40098205	40098205	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEYL	26508	broad.mit.edu	37	1	40098205	40098205	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL1	84439	broad.mit.edu	37	14	100123116	100123118	+	Intron	DEL	AAG	-	-	rs35577018		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIATL1	84641	broad.mit.edu	37	9	97200928	97200928	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIATL1	84641	broad.mit.edu	37	9	97200928	97200928	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIATL1	84641	broad.mit.edu	37	9	97200928	97200928	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK2	28996	broad.mit.edu	37	7	139259969	139259969	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3J	8356	broad.mit.edu	37	6	27858239	27858239	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3J	8356	broad.mit.edu	37	6	27858239	27858239	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3J	8356	broad.mit.edu	37	6	27858239	27858239	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BF	440689	broad.mit.edu	37	1	149785267	149785267	+	5'Flank	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BF	440689	broad.mit.edu	37	1	149785267	149785267	+	5'Flank	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148759887	148759887	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148759887	148759887	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148759887	148759887	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186141073	186141073	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186141073	186141073	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPM	4670	broad.mit.edu	37	19	8533572	8533572	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPM	4670	broad.mit.edu	37	19	8533572	8533572	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HORMAD1	84072	broad.mit.edu	37	1	150687183	150687183	+	Intron	DEL	T	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA5	3202	broad.mit.edu	37	7	27182747	27182747	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA5	3202	broad.mit.edu	37	7	27182747	27182747	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA5	3202	broad.mit.edu	37	7	27182747	27182747	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD12	3238	broad.mit.edu	37	2	176965302	176965302	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD12	3238	broad.mit.edu	37	2	176965302	176965302	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD8	3234	broad.mit.edu	37	2	176995683	176995683	+	Intron	DEL	T	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS4	89781	broad.mit.edu	37	22	26860726	26860726	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS4	89781	broad.mit.edu	37	22	26860726	26860726	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS4	89781	broad.mit.edu	37	22	26860726	26860726	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18318261	18318261	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18318261	18318261	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18318261	18318261	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPX	3263	broad.mit.edu	37	11	6462266	6462266	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPX	3263	broad.mit.edu	37	11	6462266	6462266	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB8	26353	broad.mit.edu	37	12	119617367	119617367	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB8	26353	broad.mit.edu	37	12	119617367	119617367	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114010104	114010104	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114010104	114010104	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114010104	114010104	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70841870	70841870	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70841870	70841870	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70841870	70841870	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS2	55699	broad.mit.edu	37	1	220311269	220311269	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS2	55699	broad.mit.edu	37	1	220311269	220311269	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS2	55699	broad.mit.edu	37	1	220311269	220311269	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICK	22858	broad.mit.edu	37	6	52874028	52874028	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH3A	3419	broad.mit.edu	37	15	78453903	78453903	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH3A	3419	broad.mit.edu	37	15	78453903	78453903	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH3A	3419	broad.mit.edu	37	15	78453903	78453903	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI16	3428	broad.mit.edu	37	1	158988299	158988299	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI16	3428	broad.mit.edu	37	1	158988299	158988299	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI16	3428	broad.mit.edu	37	1	158988299	158988299	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNAR2	3455	broad.mit.edu	37	21	34617536	34617536	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNAR2	3455	broad.mit.edu	37	21	34617536	34617536	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC3	9543	broad.mit.edu	37	15	65622021	65622021	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC3	9543	broad.mit.edu	37	15	65622021	65622021	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC3	9543	broad.mit.edu	37	15	65622021	65622021	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47075346	47075346	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47075346	47075346	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47075346	47075346	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP5	3488	broad.mit.edu	37	2	217543051	217543051	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP5	3488	broad.mit.edu	37	2	217543051	217543051	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9B	22997	broad.mit.edu	37	11	133806092	133806092	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18RAP	8807	broad.mit.edu	37	2	103059756	103059756	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18RAP	8807	broad.mit.edu	37	2	103059756	103059756	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18RAP	8807	broad.mit.edu	37	2	103059756	103059756	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F10	84639	broad.mit.edu	37	2	113832210	113832210	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F10	84639	broad.mit.edu	37	2	113832364	113832364	+	Silent	SNP	C	T	T	rs34320972	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F10	84639	broad.mit.edu	37	2	113832210	113832210	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F10	84639	broad.mit.edu	37	2	113832364	113832364	+	Silent	SNP	C	T	T	rs34320972	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F10	84639	broad.mit.edu	37	2	113832210	113832210	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F10	84639	broad.mit.edu	37	2	113832364	113832364	+	Silent	SNP	C	T	T	rs34320972	byFrequency	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R2	7850	broad.mit.edu	37	2	102632562	102632563	+	Intron	DEL	AC	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL25	64806	broad.mit.edu	37	14	23842145	23842145	+	5'UTR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL25	64806	broad.mit.edu	37	14	23842145	23842145	+	5'UTR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL25	64806	broad.mit.edu	37	14	23842145	23842145	+	5'UTR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL31RA	133396	broad.mit.edu	37	5	55164777	55164777	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL31RA	133396	broad.mit.edu	37	5	55164777	55164777	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL31RA	133396	broad.mit.edu	37	5	55164777	55164777	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35876456	35876456	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35876456	35876456	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35876456	35876456	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155234092	155234093	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155234092	155234093	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155234092	155234093	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMT	10989	broad.mit.edu	37	2	86371798	86371798	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMT	10989	broad.mit.edu	37	2	86371798	86371798	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMT	10989	broad.mit.edu	37	2	86371798	86371798	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INS-IGF2	723961	broad.mit.edu	37	11	2182108	2182108	+	Missense_Mutation	SNP	C	G	G	rs80356664		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INS-IGF2	723961	broad.mit.edu	37	11	2182108	2182108	+	Missense_Mutation	SNP	C	G	G	rs80356664		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156815066	156815066	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156815066	156815066	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156815066	156815066	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP1	8826	broad.mit.edu	37	15	91034542	91034542	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP1	8826	broad.mit.edu	37	15	91034542	91034542	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP1	8826	broad.mit.edu	37	15	91034542	91034542	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75923418	75923418	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75950245	75950245	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75923418	75923418	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75950245	75950245	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75923418	75923418	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF4	3662	broad.mit.edu	37	6	396878	396878	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF5	3663	broad.mit.edu	37	7	128588454	128588454	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68631901	68631901	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68631901	68631901	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68631901	68631901	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52370859	52370859	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52370859	52370859	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52370859	52370859	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54803186	54803186	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54803186	54803186	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54803186	54803186	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15688991	15688991	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15688991	15688991	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15688991	15688991	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31424230	31424230	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31429491	31429491	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31424230	31424230	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31429491	31429491	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31424230	31424230	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31429491	31429491	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31372608	31372608	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31384649	31384649	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31391186	31391186	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31372608	31372608	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31384649	31384649	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31391186	31391186	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31372608	31372608	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31384649	31384649	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31391186	31391186	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7768847	7768847	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7768847	7768847	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7768847	7768847	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4748018	4748018	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4748018	4748018	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4748018	4748018	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26596616	26596616	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26596616	26596616	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAG2	3714	broad.mit.edu	37	14	105613765	105613765	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAG2	3714	broad.mit.edu	37	14	105613765	105613765	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6083525	6083525	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6083525	6083525	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6083525	6083525	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124160959	124160959	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124160959	124160959	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	123863305	123863305	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124160959	124160959	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD10	10324	broad.mit.edu	37	2	170371489	170371489	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD10	10324	broad.mit.edu	37	2	170371489	170371489	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD10	10324	broad.mit.edu	37	2	170371489	170371489	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA6	3742	broad.mit.edu	37	12	4920245	4920245	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA6	3742	broad.mit.edu	37	12	4919483	4919483	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK9	51305	broad.mit.edu	37	8	140715079	140715079	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK9	51305	broad.mit.edu	37	8	140715079	140715079	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78651261	78651261	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78651261	78651261	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78651261	78651261	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73867320	73867320	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196395118	196395118	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196395118	196395118	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196395118	196395118	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNV1	27012	broad.mit.edu	37	8	110984410	110984410	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5C	8242	broad.mit.edu	37	X	53244106	53244106	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM6B	23135	broad.mit.edu	37	17	7752089	7752089	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM6B	23135	broad.mit.edu	37	17	7752089	7752089	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KGFLP2	654466	broad.mit.edu	37	9	41962753	41962756	+	Intron	DEL	GAAA	-	-	rs138206184	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS2	202559	broad.mit.edu	37	6	62757662	62757662	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS2	202559	broad.mit.edu	37	6	62757662	62757662	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS2	202559	broad.mit.edu	37	6	62757662	62757662	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0226	9711	broad.mit.edu	37	3	197404490	197404491	+	Intron	INS	-	AACCAGGG	AACCAGGG			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0226	9711	broad.mit.edu	37	3	197410140	197410140	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0226	9711	broad.mit.edu	37	3	197410140	197410140	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0226	9711	broad.mit.edu	37	3	197410140	197410140	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27715390	27715390	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27782858	27782858	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27784480	27784480	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27715390	27715390	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27782858	27782858	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27784480	27784480	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27715390	27715390	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27782858	27782858	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27784480	27784480	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118227917	118227917	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118227917	118227917	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118227917	118227917	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1279	26128	broad.mit.edu	37	10	70775267	70775267	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1279	26128	broad.mit.edu	37	10	70775267	70775267	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1279	26128	broad.mit.edu	37	10	70775267	70775267	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94160828	94160828	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95504896	95504896	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95504896	95504896	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95504896	95504896	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1486	57624	broad.mit.edu	37	2	226447291	226447291	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1530	57654	broad.mit.edu	37	4	1368991	1368991	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1530	57654	broad.mit.edu	37	4	1368991	1368991	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43497731	43497731	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43497731	43497731	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43497731	43497731	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18A	81930	broad.mit.edu	37	11	28091008	28091008	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18A	81930	broad.mit.edu	37	11	28091008	28091008	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18A	81930	broad.mit.edu	37	11	28091008	28091008	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIT	3815	broad.mit.edu	37	4	55597386	55597386	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIT	3815	broad.mit.edu	37	4	55597386	55597386	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135024994	135024994	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135024994	135024994	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135024994	135024994	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45729978	45729978	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45755523	45755523	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45729978	45729978	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45755523	45755523	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45755523	45755523	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRBA1	84626	broad.mit.edu	37	7	149419947	149419947	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRBA1	84626	broad.mit.edu	37	7	149419947	149419947	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRBA1	84626	broad.mit.edu	37	7	149419947	149419947	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRIT1	889	broad.mit.edu	37	7	91842368	91842368	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRIT1	889	broad.mit.edu	37	7	91842368	91842368	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53041739	53041739	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53041739	53041739	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53041739	53041739	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651191	1651199	+	In_Frame_Del	DEL	GGCTGTGGA	-	-	rs144216147		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP8-1	337879	broad.mit.edu	37	21	32185390	32185390	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP8-1	337879	broad.mit.edu	37	21	32185390	32185390	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP8-1	337879	broad.mit.edu	37	21	32185390	32185390	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTN1	3895	broad.mit.edu	37	14	56086091	56086091	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTN1	3895	broad.mit.edu	37	14	56086091	56086091	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTN1	3895	broad.mit.edu	37	14	56086091	56086091	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6943380	6943380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6943380	6943380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6943380	6943380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAPTM4B	55353	broad.mit.edu	37	8	98831349	98831349	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAPTM4B	55353	broad.mit.edu	37	8	98831349	98831349	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAPTM4B	55353	broad.mit.edu	37	8	98831349	98831349	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAT2	7462	broad.mit.edu	37	7	73634513	73634513	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAT2	7462	broad.mit.edu	37	7	73634513	73634513	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3E	353145	broad.mit.edu	37	1	152538599	152538599	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3E	353145	broad.mit.edu	37	1	152538599	152538599	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3E	353145	broad.mit.edu	37	1	152538599	152538599	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCLAT1	253558	broad.mit.edu	37	2	30755863	30755863	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCLAT1	253558	broad.mit.edu	37	2	30755863	30755863	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN9	392399	broad.mit.edu	37	9	138556232	138556232	+	Intron	SNP	G	C	C	rs117500460	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN9	392399	broad.mit.edu	37	9	138556232	138556232	+	Intron	SNP	G	C	C	rs117500460	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN9	392399	broad.mit.edu	37	9	138556232	138556232	+	Intron	SNP	G	C	C	rs117500460	by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16899834	16899834	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16899834	16899834	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETMD1	25875	broad.mit.edu	37	12	51453261	51453261	+	3'UTR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS4	3960	broad.mit.edu	37	19	39299284	39299284	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25030070	25030070	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25030070	25030070	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGTN	1939	broad.mit.edu	37	1	206785640	206785640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGTN	1939	broad.mit.edu	37	1	206785640	206785640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGTN	1939	broad.mit.edu	37	1	206785640	206785640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMK1	3984	broad.mit.edu	37	7	73530111	73530111	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMK1	3984	broad.mit.edu	37	7	73530111	73530111	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMK1	3984	broad.mit.edu	37	7	73530111	73530111	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238054006	238054006	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238090685	238090685	+	RNA	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238054006	238054006	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238090685	238090685	+	RNA	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238054006	238054006	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238090292	238090292	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238090685	238090685	+	RNA	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC113230	113230	broad.mit.edu	37	19	14181324	14181324	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC113230	113230	broad.mit.edu	37	19	14181324	14181324	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC113230	113230	broad.mit.edu	37	19	14181324	14181324	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC146880	146880	broad.mit.edu	37	17	62747281	62747281	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC146880	146880	broad.mit.edu	37	17	62747281	62747281	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC150776	150776	broad.mit.edu	37	2	132273932	132273932	+	5'Flank	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC150776	150776	broad.mit.edu	37	2	132273932	132273932	+	5'Flank	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148012892	148012892	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC283867	283867	broad.mit.edu	37	16	65345529	65345529	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC283867	283867	broad.mit.edu	37	16	65345529	65345529	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC283867	283867	broad.mit.edu	37	16	65345529	65345529	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC283914	283914	broad.mit.edu	37	16	34623737	34623737	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC349196	349196	broad.mit.edu	37	8	7153090	7153090	+	Intron	SNP	A	G	G	rs151044606	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98974936	98974936	+	RNA	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98975871	98975871	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98974936	98974936	+	RNA	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98975871	98975871	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98974936	98974936	+	RNA	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442459	442459	broad.mit.edu	37	X	98975871	98975871	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21936627	21936627	+	RNA	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121307695	121307695	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121307695	121307695	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC651250	651250	broad.mit.edu	37	17	66150667	66150667	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC651250	651250	broad.mit.edu	37	17	66150667	66150667	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22469283	22469283	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23145716	23145717	+	Intron	DNP	CA	TT	TT			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT4	254531	broad.mit.edu	37	15	34656625	34656627	+	Intron	DEL	TTC	-	-	rs60508631	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62801787	62801787	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPL	4023	broad.mit.edu	37	8	19818481	19818481	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPL	4023	broad.mit.edu	37	8	19818481	19818481	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPL	4023	broad.mit.edu	37	8	19818481	19818481	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99772756	99772756	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151412273	151412273	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151412273	151412273	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140995624	140995624	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141130549	141130549	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141130585	141130585	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141641672	141641672	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140995624	140995624	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141130549	141130549	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141130585	141130585	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141641672	141641672	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140995624	140995624	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141130549	141130549	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141130585	141130585	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46943001	46943001	+	5'Flank	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194081543	194081543	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194081543	194081543	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194081543	194081543	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC6	23639	broad.mit.edu	37	8	133637568	133637568	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC6	23639	broad.mit.edu	37	8	133637568	133637568	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC6	23639	broad.mit.edu	37	8	133637568	133637568	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8C	84230	broad.mit.edu	37	1	90179864	90179864	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8C	84230	broad.mit.edu	37	1	90179864	90179864	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8C	84230	broad.mit.edu	37	1	90179864	90179864	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40689416	40689416	+	Silent	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40689416	40689416	+	Silent	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40689416	40689416	+	Silent	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204588984	204588984	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204588984	204588984	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204588984	204588984	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSP1	4046	broad.mit.edu	37	11	1905755	1905755	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSP1	4046	broad.mit.edu	37	11	1905755	1905755	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSP1	4046	broad.mit.edu	37	11	1905755	1905755	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LST1	7940	broad.mit.edu	37	6	31555160	31555160	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LST1	7940	broad.mit.edu	37	6	31555160	31555160	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LST1	7940	broad.mit.edu	37	6	31555160	31555160	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	75052556	75052556	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	75052556	75052556	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	75052556	75052556	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY86	9450	broad.mit.edu	37	6	6626683	6626683	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY86	9450	broad.mit.edu	37	6	6626683	6626683	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY86	9450	broad.mit.edu	37	6	6626683	6626683	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLAL1	127018	broad.mit.edu	37	1	219383918	219383918	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLAL1	127018	broad.mit.edu	37	1	219383918	219383918	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLAL1	127018	broad.mit.edu	37	1	219383918	219383918	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	14066278	14066278	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	14066278	14066278	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	14066278	14066278	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEL2	54551	broad.mit.edu	37	15	23890563	23890564	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35790577	35790577	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35790577	35790577	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K5	5607	broad.mit.edu	37	15	67920253	67920253	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164853829	164853829	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH3	115123	broad.mit.edu	37	5	126253786	126253786	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217123969	217123969	+	3'UTR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217123969	217123969	+	3'UTR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217123969	217123969	+	3'UTR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220825386	220825386	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220825386	220825386	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220825386	220825386	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAS1L	116511	broad.mit.edu	37	6	29455777	29455777	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAS1L	116511	broad.mit.edu	37	6	29455777	29455777	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST3	23031	broad.mit.edu	37	19	18254532	18254532	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST3	23031	broad.mit.edu	37	19	18254532	18254532	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT1A	4143	broad.mit.edu	37	10	82043734	82043734	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT1A	4143	broad.mit.edu	37	10	82043734	82043734	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT1A	4143	broad.mit.edu	37	10	82043734	82043734	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN1	4146	broad.mit.edu	37	1	31194492	31194492	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN1	4146	broad.mit.edu	37	1	31194492	31194492	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN1	4146	broad.mit.edu	37	1	31194492	31194492	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAX	4149	broad.mit.edu	37	14	65544438	65544438	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAX	4149	broad.mit.edu	37	14	65544438	65544438	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L2	23101	broad.mit.edu	37	3	183013262	183013262	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L2	23101	broad.mit.edu	37	3	183013262	183013262	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L2	23101	broad.mit.edu	37	3	183013262	183013262	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127324076	127324076	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127324076	127324076	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED28	80306	broad.mit.edu	37	4	17616234	17616234	+	5'Flank	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED28	80306	broad.mit.edu	37	4	17616234	17616234	+	5'Flank	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF11	84465	broad.mit.edu	37	15	66215346	66215346	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF11	84465	broad.mit.edu	37	15	66215346	66215346	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEI1	150365	broad.mit.edu	37	22	42095478	42095478	+	5'Flank	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP5	8076	broad.mit.edu	37	12	8814708	8814708	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141708386	141708386	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141796109	141796109	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141708386	141708386	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141796109	141796109	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141708386	141708386	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141796109	141796109	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4A	11320	broad.mit.edu	37	2	99261914	99261914	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4A	11320	broad.mit.edu	37	2	99261914	99261914	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4A	11320	broad.mit.edu	37	2	99261914	99261914	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74902072	74902072	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74902072	74902072	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74902072	74902072	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43206828	43206828	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43276958	43276958	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43206828	43206828	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43276958	43276958	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43276958	43276958	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL2	9645	broad.mit.edu	37	11	12244189	12244189	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR521-1	574494	broad.mit.edu	37	19	54250739	54250739	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49436374	49436374	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49436374	49436374	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49436374	49436374	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118339474	118339474	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118339474	118339474	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118339474	118339474	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD	23531	broad.mit.edu	37	17	53491543	53491543	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD	23531	broad.mit.edu	37	17	53491543	53491543	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD	23531	broad.mit.edu	37	17	53491543	53491543	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89053922	89053922	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89131071	89131071	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89053922	89053922	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89131071	89131071	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89053922	89053922	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89131071	89131071	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102464323	102464323	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102464323	102464323	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102464323	102464323	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90857222	90857222	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90857222	90857222	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90857222	90857222	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH8	54737	broad.mit.edu	37	13	20244255	20244255	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH8	54737	broad.mit.edu	37	13	20244255	20244255	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH8	54737	broad.mit.edu	37	13	20244255	20244255	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZL3	196264	broad.mit.edu	37	11	118105960	118105960	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZL3	196264	broad.mit.edu	37	11	118105960	118105960	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZL3	196264	broad.mit.edu	37	11	118105960	118105960	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60754829	60754829	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60754829	60754829	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60754829	60754829	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60154047	60154047	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60165318	60165318	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60154047	60154047	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60165318	60165318	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60154047	60154047	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60165318	60165318	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6E	245802	broad.mit.edu	37	11	60102398	60102398	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6E	245802	broad.mit.edu	37	11	60102398	60102398	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6E	245802	broad.mit.edu	37	11	60102398	60102398	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR4	9110	broad.mit.edu	37	17	56569850	56569850	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR4	9110	broad.mit.edu	37	17	56569850	56569850	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR4	9110	broad.mit.edu	37	17	56569850	56569850	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR6	9107	broad.mit.edu	37	13	25832811	25832811	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR6	9107	broad.mit.edu	37	13	25832811	25832811	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR6	9107	broad.mit.edu	37	13	25832811	25832811	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	237057970	237057970	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9024497	9024497	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9049935	9049935	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9057909	9057909	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9075971	9075971	+	Silent	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9024497	9024497	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9049935	9049935	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9057909	9057909	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9075971	9075971	+	Silent	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9024497	9024497	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9049935	9049935	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9057909	9057909	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9075971	9075971	+	Silent	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1157860	1157860	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1271072	1271072	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1157860	1157860	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1271072	1271072	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1271072	1271072	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113538017	113538017	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113538017	113538017	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10204269	10204269	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10222113	10222113	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10204269	10204269	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10222113	10222113	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10204269	10204269	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10222113	10222113	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10408755	10408756	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10408755	10408756	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10408755	10408756	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10426485	10426485	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10428361	10428361	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10426485	10426485	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10428361	10428361	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10426485	10426485	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10428361	10428361	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23853903	23853903	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23853903	23853903	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23853903	23853903	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10303526	10303526	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10303526	10303526	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18034880	18034880	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18034880	18034880	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192254994	192254994	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192254994	192254994	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192254994	192254994	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1C	4641	broad.mit.edu	37	17	1385813	1385813	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1C	4641	broad.mit.edu	37	17	1385813	1385813	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1C	4641	broad.mit.edu	37	17	1385813	1385813	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26455130	26455130	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26455130	26455130	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26455130	26455130	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12647645	12647645	+	Missense_Mutation	SNP	G	C	C	rs140013261	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12647645	12647645	+	Missense_Mutation	SNP	G	C	C	rs140013261	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12647645	12647645	+	Missense_Mutation	SNP	G	C	C	rs140013261	byFrequency	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24433662	24433662	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24433662	24433662	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24433662	24433662	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62839147	62839147	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62844832	62844832	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62839147	62839147	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62844832	62844832	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62844832	62844832	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT1	29104	broad.mit.edu	37	21	30252230	30252230	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT1	29104	broad.mit.edu	37	21	30252230	30252230	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT1	29104	broad.mit.edu	37	21	30252230	30252230	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA16	79612	broad.mit.edu	37	13	41892955	41892955	+	Missense_Mutation	SNP	G	C	C	rs143056243	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA16	79612	broad.mit.edu	37	13	41892955	41892955	+	Missense_Mutation	SNP	G	C	C	rs143056243	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA16	79612	broad.mit.edu	37	13	41892955	41892955	+	Missense_Mutation	SNP	G	C	C	rs143056243	byFrequency	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101795440	101795440	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101795440	101795440	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15372540	15372540	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145931802	145931802	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145272960	145272960	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145931802	145931802	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145273651	145273651	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145931802	145931802	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16894212	16894212	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144598589	144598589	+	5'UTR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144598589	144598589	+	5'UTR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54892998	54892998	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54892998	54892998	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133887593	133887593	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133887593	133887593	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133887593	133887593	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK5	341676	broad.mit.edu	37	13	52660550	52660550	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK5	341676	broad.mit.edu	37	13	52660550	52660550	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45000952	45000952	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45269706	45269706	+	5'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45000952	45000952	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45269706	45269706	+	5'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52507529	52507529	+	Silent	SNP	C	G	G	rs146481572		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52507529	52507529	+	Silent	SNP	C	G	G	rs146481572		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52507529	52507529	+	Silent	SNP	C	G	G	rs146481572		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55508760	55508760	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55508760	55508760	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55508760	55508760	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL6	65083	broad.mit.edu	37	9	33467207	33467207	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL6	65083	broad.mit.edu	37	9	33467207	33467207	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL6	65083	broad.mit.edu	37	9	33467207	33467207	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150698541	150698541	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150698541	150698541	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH3	4854	broad.mit.edu	37	19	15277961	15277961	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH3	4854	broad.mit.edu	37	19	15277961	15277961	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH3	4854	broad.mit.edu	37	19	15277961	15277961	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32184741	32184741	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32184741	32184741	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32184741	32184741	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101607208	101607208	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101607208	101607208	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101607208	101607208	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP4	261734	broad.mit.edu	37	1	6008350	6008350	+	Intron	SNP	G	A	A	rs149090182	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS2	7827	broad.mit.edu	37	1	179520370	179520370	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS2	7827	broad.mit.edu	37	1	179520370	179520370	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS2	7827	broad.mit.edu	37	1	179520370	179520370	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115372218	115372218	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115372218	115372218	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115372218	115372218	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50765774	50765775	+	Splice_Site	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50765774	50765775	+	Splice_Site	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50765775	50765775	+	Splice_Site	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176709317	176709317	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176709317	176709317	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176709317	176709317	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6602491	6602491	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6602491	6602491	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6602491	6602491	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107973450	107973450	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107973450	107973450	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107973450	107973450	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87285621	87285621	+	5'UTR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87285621	87285621	+	5'UTR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110334668	110334668	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110334668	110334668	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110334668	110334668	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUFIP2	57532	broad.mit.edu	37	17	27614038	27614038	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUFIP2	57532	broad.mit.edu	37	17	27614038	27614038	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUFIP2	57532	broad.mit.edu	37	17	27614038	27614038	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24878986	24878986	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228480972	228480972	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228511036	228511036	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228480972	228480972	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228511036	228511036	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228480972	228480972	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228511036	228511036	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28141441	28141441	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28200322	28200323	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28211878	28211878	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28141441	28141441	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28200322	28200323	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28211878	28211878	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28141441	28141441	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28200322	28200323	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28211878	28211878	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102296451	102296451	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102296451	102296451	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102296451	102296451	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OMD	4958	broad.mit.edu	37	9	95179363	95179363	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OMD	4958	broad.mit.edu	37	9	95179363	95179363	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OMD	4958	broad.mit.edu	37	9	95179363	95179363	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193360448	193360448	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193360448	193360448	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132306151	132306151	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132306151	132306151	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132306151	132306151	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10X1	128367	broad.mit.edu	37	1	158548787	158548787	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10X1	128367	broad.mit.edu	37	1	158548787	158548787	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10X1	128367	broad.mit.edu	37	1	158548787	158548787	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11H4	390442	broad.mit.edu	37	14	20711267	20711267	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11H4	390442	broad.mit.edu	37	14	20711267	20711267	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11H4	390442	broad.mit.edu	37	14	20711267	20711267	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L6	392390	broad.mit.edu	37	9	125511888	125511888	+	5'Flank	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N1	138883	broad.mit.edu	37	9	125289132	125289132	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N1	138883	broad.mit.edu	37	9	125289132	125289132	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N1	138883	broad.mit.edu	37	9	125289132	125289132	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248138331	248138331	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248138389	248138389	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224602	248224602	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224602	248224602	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224602	248224602	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308701	248308701	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308701	248308701	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308701	248308701	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248737350	248737350	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248737350	248737350	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248737350	248737350	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551725	248551725	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551725	248551725	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551725	248551725	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C3	256144	broad.mit.edu	37	11	48347153	48347153	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C3	256144	broad.mit.edu	37	11	48347153	48347153	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C3	256144	broad.mit.edu	37	11	48347153	48347153	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22368980	22368980	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22368980	22368980	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22368980	22368980	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413773	22413773	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413773	22413773	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413773	22413773	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4P4	81300	broad.mit.edu	37	11	55405957	55405957	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4P4	81300	broad.mit.edu	37	11	55405957	55405957	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4P4	81300	broad.mit.edu	37	11	55405957	55405957	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661252	4661252	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661252	4661252	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661252	4661252	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5020771	5020771	+	Missense_Mutation	SNP	C	A	A	rs150980273	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5020771	5020771	+	Missense_Mutation	SNP	C	A	A	rs150980273	byFrequency	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5020771	5020771	+	Missense_Mutation	SNP	C	A	A	rs150980273	byFrequency	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579766	55579766	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579766	55579766	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579766	55579766	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M3	219482	broad.mit.edu	37	11	56237426	56237426	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M3	219482	broad.mit.edu	37	11	56237426	56237426	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M3	219482	broad.mit.edu	37	11	56237426	56237426	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T1	390155	broad.mit.edu	37	11	56042957	56042957	+	5'Flank	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T1	390155	broad.mit.edu	37	11	56042957	56042957	+	5'Flank	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T1	390155	broad.mit.edu	37	11	56042957	56042957	+	5'Flank	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875336	247875336	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875336	247875336	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875336	247875336	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749605	142749605	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749605	142749605	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749605	142749605	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E37P	26636	broad.mit.edu	37	13	42014850	42014850	+	5'Flank	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B8	26493	broad.mit.edu	37	11	124310713	124310713	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B8	26493	broad.mit.edu	37	11	124310713	124310713	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B8	26493	broad.mit.edu	37	11	124310713	124310713	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31871586	31871586	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31871586	31871586	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31871586	31871586	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD6B	51633	broad.mit.edu	37	8	92082483	92082483	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD6B	51633	broad.mit.edu	37	8	92082483	92082483	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29598250	29598250	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29598303	29598303	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29598250	29598250	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29598303	29598303	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29598250	29598250	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29598303	29598303	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY8	286530	broad.mit.edu	37	X	1584949	1584949	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY8	286530	broad.mit.edu	37	X	1584949	1584949	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN3	29763	broad.mit.edu	37	11	47204070	47204070	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN3	29763	broad.mit.edu	37	11	47204070	47204070	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN3	29763	broad.mit.edu	37	11	47204070	47204070	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77069685	77069686	+	Intron	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77069685	77069686	+	Intron	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176681212	176681212	+	Intron	SNP	G	T	T	rs142184423	by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205978257	205978257	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206041390	206041390	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205978257	205978257	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206041390	206041390	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205978257	205978257	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150840204	150840204	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150841089	150841089	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150840204	150840204	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150841089	150841089	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150840204	150840204	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150841089	150841089	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102584414	102584414	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102584414	102584414	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102584414	102584414	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127253901	127253901	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127253901	127253901	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127253901	127253901	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	18960982	18960982	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	18960982	18960982	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	18960982	18960982	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134071163	134071163	+	5'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134073054	134073054	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134071163	134071163	+	5'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134073054	134073054	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134073054	134073054	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91133049	91133049	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91133049	91133049	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55721653	55721653	+	Splice_Site	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55849885	55849885	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55943196	55943196	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55721653	55721653	+	Splice_Site	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55849885	55849885	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55943196	55943196	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55943196	55943196	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC2	56134	broad.mit.edu	37	5	140346519	140346519	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC2	56134	broad.mit.edu	37	5	140346519	140346519	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC2	56134	broad.mit.edu	37	5	140346519	140346519	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140562928	140562928	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140562928	140562928	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140562928	140562928	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554394	140554394	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554394	140554394	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554394	140554394	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233394394	233394394	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233394394	233394394	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233394394	233394394	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PC	5091	broad.mit.edu	37	11	66638194	66638194	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PC	5091	broad.mit.edu	37	11	66638194	66638194	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165827162	165827162	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165827162	165827162	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165827162	165827162	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183095612	183095612	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183095612	183095612	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20792690	20792690	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20792690	20792690	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20792690	20792690	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144852595	144852595	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144881364	144881364	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144852595	144852595	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144881364	144881364	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144881364	144881364	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95380617	95380617	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95380617	95380617	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95380617	95380617	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6H	5149	broad.mit.edu	37	12	15134401	15134401	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6H	5149	broad.mit.edu	37	12	15134401	15134401	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6H	5149	broad.mit.edu	37	12	15134401	15134401	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE7B	27115	broad.mit.edu	37	6	136359274	136359274	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55139951	55139951	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55156695	55156695	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55139951	55139951	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55156695	55156695	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55156695	55156695	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRB	5159	broad.mit.edu	37	5	149503795	149503795	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRB	5159	broad.mit.edu	37	5	149503795	149503795	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRB	5159	broad.mit.edu	37	5	149503795	149503795	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM1	9124	broad.mit.edu	37	10	97006804	97006805	+	Intron	DEL	CT	-	-	rs67836384		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS2	57107	broad.mit.edu	37	6	107531724	107531724	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS2	57107	broad.mit.edu	37	6	107531724	107531724	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS2	57107	broad.mit.edu	37	6	107531724	107531724	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57327996	57327996	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57327996	57327996	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57327996	57327996	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX12	5193	broad.mit.edu	37	17	33904575	33904575	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX12	5193	broad.mit.edu	37	17	33904575	33904575	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX12	5193	broad.mit.edu	37	17	33904575	33904575	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179525416	179525416	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179525416	179525416	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179525416	179525416	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX7	5191	broad.mit.edu	37	6	137187736	137187736	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX7	5191	broad.mit.edu	37	6	137187736	137187736	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX7	5191	broad.mit.edu	37	6	137187736	137187736	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKM	5213	broad.mit.edu	37	12	48501054	48501054	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKM	5213	broad.mit.edu	37	12	48501054	48501054	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKM	5213	broad.mit.edu	37	12	48501054	48501054	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21A	51317	broad.mit.edu	37	11	45992988	45992988	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF2	5253	broad.mit.edu	37	9	96425966	96425967	+	Intron	DEL	CA	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118520663	118520663	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118520663	118520663	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118520663	118520663	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHRF1	57661	broad.mit.edu	37	11	608157	608157	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21119259	21119259	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21119259	21119259	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21119259	21119259	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21174934	21174934	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PID1	55022	broad.mit.edu	37	2	230020666	230020666	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PID1	55022	broad.mit.edu	37	2	230020666	230020666	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PID1	55022	broad.mit.edu	37	2	230020666	230020666	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204428919	204428919	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204428919	204428919	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CA	5290	broad.mit.edu	37	3	178921566	178921566	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CA	5290	broad.mit.edu	37	3	178921566	178921566	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CA	5290	broad.mit.edu	37	3	178921566	178921566	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITRM1	10531	broad.mit.edu	37	10	3185760	3185760	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITRM1	10531	broad.mit.edu	37	10	3185760	3185760	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITRM1	10531	broad.mit.edu	37	10	3185760	3185760	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110396316	110396316	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110439382	110439382	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110477365	110477365	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110396316	110396316	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110439382	110439382	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110477365	110477365	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110396316	110396316	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110439382	110439382	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110477365	110477365	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51768419	51768419	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51768419	51768419	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51768419	51768419	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX1	5316	broad.mit.edu	37	21	44441505	44441505	+	Silent	SNP	G	T	T	rs148642401		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX1	5316	broad.mit.edu	37	21	44441505	44441505	+	Silent	SNP	G	T	T	rs148642401		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX1	5316	broad.mit.edu	37	21	44441505	44441505	+	Silent	SNP	G	T	T	rs148642401		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42364436	42364436	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42364436	42364436	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42364436	42364436	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G6	8398	broad.mit.edu	37	22	38508177	38508177	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G6	8398	broad.mit.edu	37	22	38508177	38508177	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242287998	242287999	+	Intron	DNP	CA	AT	AT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242287998	242287999	+	Intron	DNP	CA	AT	AT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145027963	145027963	+	5'Flank	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145027963	145027963	+	5'Flank	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935282	131935282	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935728	131935728	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131948495	131948495	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132110059	132110059	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935282	131935282	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935728	131935728	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131948495	131948495	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132110059	132110059	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935728	131935728	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131948495	131948495	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131960581	131960581	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132110059	132110059	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHF1	79156	broad.mit.edu	37	19	30165628	30165628	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHF1	79156	broad.mit.edu	37	19	30165628	30165628	+	3'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43992633	43992633	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43992633	43992633	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43992633	43992633	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131844509	131844509	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131844509	131844509	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131844509	131844509	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA7	375775	broad.mit.edu	37	9	140399958	140399958	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLB	5423	broad.mit.edu	37	8	42196452	42196452	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133256133	133256133	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133256133	133256133	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133256133	133256133	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLG	5428	broad.mit.edu	37	15	89868528	89868529	+	Intron	INS	-	GAGGGTGTGT	GAGGGTGTGT	rs71149294		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57887210	57887210	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57896476	57896476	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57887210	57887210	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57896476	57896476	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57887210	57887210	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57896476	57896476	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124475408	124475408	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124475408	124475408	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124475408	124475408	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43157198	43157198	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43157198	43157198	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEB	339010	broad.mit.edu	37	15	21071183	21071183	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEB	339010	broad.mit.edu	37	15	21071183	21071183	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEC	388468	broad.mit.edu	37	18	14533095	14533095	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU3F1	5453	broad.mit.edu	37	1	38511276	38511276	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R7	5510	broad.mit.edu	37	2	242092932	242092932	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R7	5510	broad.mit.edu	37	2	242092932	242092932	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R7	5510	broad.mit.edu	37	2	242092932	242092932	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2A	5520	broad.mit.edu	37	8	26220330	26220330	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2A	5520	broad.mit.edu	37	8	26220330	26220330	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2A	5520	broad.mit.edu	37	8	26220330	26220330	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6380402	6380402	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6380402	6380402	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6380402	6380402	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103899482	103899482	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103899482	103899482	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103899482	103899482	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM7	11105	broad.mit.edu	37	16	90128790	90128790	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM7	11105	broad.mit.edu	37	16	90128790	90128790	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM7	11105	broad.mit.edu	37	16	90128790	90128790	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM8	56978	broad.mit.edu	37	4	81122392	81122392	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM8	56978	broad.mit.edu	37	4	81122392	81122392	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509441	23509441	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509441	23509441	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509441	23509441	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47350886	47350886	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47350886	47350886	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCSH	5589	broad.mit.edu	37	19	11558265	11558265	+	Silent	SNP	C	T	T	rs149732361		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG2	5593	broad.mit.edu	37	4	82096115	82096115	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG2	5593	broad.mit.edu	37	4	82096115	82096115	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG2	5593	broad.mit.edu	37	4	82096115	82096115	+	Splice_Site	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT1	3276	broad.mit.edu	37	19	50188237	50188237	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT1	3276	broad.mit.edu	37	19	50188237	50188237	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT1	3276	broad.mit.edu	37	19	50188237	50188237	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT5	10419	broad.mit.edu	37	14	23397429	23397429	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT5	10419	broad.mit.edu	37	14	23397429	23397429	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT5	10419	broad.mit.edu	37	14	23397429	23397429	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR23C	389152	broad.mit.edu	37	3	138762887	138762887	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR23C	389152	broad.mit.edu	37	3	138762887	138762887	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR23C	389152	broad.mit.edu	37	3	138762887	138762887	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5-ARHGAP8	553158	broad.mit.edu	37	22	45128368	45128368	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5-ARHGAP8	553158	broad.mit.edu	37	22	45128368	45128368	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE	58497	broad.mit.edu	37	1	150998278	150998278	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE	58497	broad.mit.edu	37	1	150998278	150998278	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA1	5682	broad.mit.edu	37	11	14632617	14632617	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA1	5682	broad.mit.edu	37	11	14632617	14632617	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA1	5682	broad.mit.edu	37	11	14632617	14632617	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54128710	54128711	+	Intron	INS	-	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54128710	54128711	+	Intron	INS	-	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71512437	71512437	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141712746	141712746	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141874393	141874393	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141712746	141712746	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141874393	141874393	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141712746	141712746	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141874393	141874393	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87725095	87725095	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87725095	87725095	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214705938	214705938	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214705938	214705938	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214705938	214705938	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN9	5780	broad.mit.edu	37	15	75766070	75766070	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN9	5780	broad.mit.edu	37	15	75766070	75766070	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN9	5780	broad.mit.edu	37	15	75766070	75766070	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	2987924	2987924	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	2987924	2987924	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	2987924	2987924	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198668802	198668802	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198668802	198668802	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198668802	198668802	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8465591	8465591	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8465591	8465591	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8465591	8465591	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8076447	8076447	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8076447	8076447	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8076447	8076447	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157413547	157413547	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71066567	71066567	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71066567	71066567	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71066567	71066567	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121608168	121608168	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121608168	121608168	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121608168	121608168	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7	54517	broad.mit.edu	37	7	105102889	105102889	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37735071	37735071	+	Splice_Site	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37735071	37735071	+	Splice_Site	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37735071	37735071	+	Splice_Site	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB18	22931	broad.mit.edu	37	10	27826732	27826732	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB18	22931	broad.mit.edu	37	10	27826732	27826732	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB18	22931	broad.mit.edu	37	10	27826732	27826732	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135907897	135907897	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135907897	135907897	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135907897	135907897	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129957388	129957388	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129957388	129957388	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129957388	129957388	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85774568	85774568	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85774709	85774709	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85774568	85774568	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85774709	85774709	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85774568	85774568	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALYL	138046	broad.mit.edu	37	8	85774709	85774709	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25502582	25502582	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25502584	25502584	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25502582	25502582	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25502584	25502584	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114792860	114792860	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114792860	114792860	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114792860	114792860	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26217434	26217434	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26218337	26218337	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26220752	26220752	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26217434	26217434	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26218337	26218337	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26220752	26220752	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26217434	26217434	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26218337	26218337	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26220752	26220752	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM23	55147	broad.mit.edu	37	14	23378502	23378502	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM23	55147	broad.mit.edu	37	14	23378502	23378502	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM9	23543	broad.mit.edu	37	22	36218099	36218099	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REEP3	221035	broad.mit.edu	37	10	65357681	65357681	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103294529	103294529	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103294529	103294529	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103294529	103294529	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REST	5978	broad.mit.edu	37	4	57796165	57796165	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REST	5978	broad.mit.edu	37	4	57796165	57796165	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REST	5978	broad.mit.edu	37	4	57796165	57796165	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	175958396	175958396	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	175958396	175958396	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	175958396	175958396	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX7	64864	broad.mit.edu	37	15	56390227	56390227	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX7	64864	broad.mit.edu	37	15	56390227	56390227	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107041047	107041047	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107041047	107041047	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107041047	107041047	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS20	8601	broad.mit.edu	37	8	54859271	54859271	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS20	8601	broad.mit.edu	37	8	54859271	54859271	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS20	8601	broad.mit.edu	37	8	54859271	54859271	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116346655	116346655	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	73026494	73026494	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	73026494	73026494	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	73026494	73026494	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87352378	87352378	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87352380	87352380	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87352378	87352378	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87352380	87352380	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87352378	87352378	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87352380	87352380	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31526186	31526186	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31526186	31526186	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31526186	31526186	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25399641	25399641	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25399641	25399641	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF212	285498	broad.mit.edu	37	4	1090649	1090649	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF212	285498	broad.mit.edu	37	4	1090649	1090649	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF212	285498	broad.mit.edu	37	4	1090649	1090649	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11484041	11484041	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11484041	11484041	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11484041	11484041	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROD1	9991	broad.mit.edu	37	9	115095039	115095040	+	Intron	DEL	CG	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1L	83853	broad.mit.edu	37	5	10450330	10450330	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1L	83853	broad.mit.edu	37	5	10450330	10450330	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94537933	94537933	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94537933	94537933	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3AL	9501	broad.mit.edu	37	17	96884	96884	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3AL	9501	broad.mit.edu	37	17	96884	96884	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3AL	9501	broad.mit.edu	37	17	96884	96884	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL13	6137	broad.mit.edu	37	16	89629283	89629283	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL13	6137	broad.mit.edu	37	16	89629283	89629283	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL13	6137	broad.mit.edu	37	16	89629283	89629283	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS4Y2	140032	broad.mit.edu	37	Y	22923177	22923179	+	In_Frame_Del	DEL	CAG	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS4Y2	140032	broad.mit.edu	37	Y	22923177	22923179	+	In_Frame_Del	DEL	CAG	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS4Y2	140032	broad.mit.edu	37	Y	22923177	22923179	+	In_Frame_Del	DEL	CAG	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KB1	6198	broad.mit.edu	37	17	57970609	57970609	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1	54665	broad.mit.edu	37	1	114310969	114310969	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1	54665	broad.mit.edu	37	1	114310969	114310969	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1	54665	broad.mit.edu	37	1	114310969	114310969	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77409521	77409521	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH6A	81492	broad.mit.edu	37	19	46303752	46303752	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH6A	81492	broad.mit.edu	37	19	46303752	46303752	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH6A	81492	broad.mit.edu	37	19	46303752	46303752	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTKN	6242	broad.mit.edu	37	2	74659879	74659879	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTKN	6242	broad.mit.edu	37	2	74659879	74659879	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70156631	70156631	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70156631	70156631	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70156631	70156631	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608843	237608843	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608843	237608843	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608843	237608843	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33905337	33905337	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34115267	34115267	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33905337	33905337	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34115267	34115267	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34115267	34115267	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34153353	34153353	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAA4	6291	broad.mit.edu	37	11	18257309	18257309	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAA4	6291	broad.mit.edu	37	11	18257309	18257309	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAA4	6291	broad.mit.edu	37	11	18257309	18257309	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL2	6297	broad.mit.edu	37	14	21992890	21992890	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL2	6297	broad.mit.edu	37	14	21992890	21992890	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL2	6297	broad.mit.edu	37	14	21992890	21992890	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92765125	92765125	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92765125	92765125	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92765125	92765125	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS3	55291	broad.mit.edu	37	11	68377095	68377095	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARDH	1757	broad.mit.edu	37	9	136561579	136561579	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARDH	1757	broad.mit.edu	37	9	136561579	136561579	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBK1	388228	broad.mit.edu	37	16	28331646	28331646	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBK1	388228	broad.mit.edu	37	16	28331646	28331646	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCD5	79966	broad.mit.edu	37	4	83626448	83626448	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCD5	79966	broad.mit.edu	37	4	83626448	83626448	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCD5	79966	broad.mit.edu	37	4	83626448	83626448	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52082891	52082891	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52082891	52082891	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52082891	52082891	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24C	9632	broad.mit.edu	37	10	75523493	75523493	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24C	9632	broad.mit.edu	37	10	75523493	75523493	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24C	9632	broad.mit.edu	37	10	75523493	75523493	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEH1L	81929	broad.mit.edu	37	18	12971215	12971215	+	Silent	SNP	C	T	T	rs142041554	byFrequency	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4B	10509	broad.mit.edu	37	15	90760868	90760868	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4B	10509	broad.mit.edu	37	15	90760868	90760868	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4B	10509	broad.mit.edu	37	15	90760868	90760868	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151111849	151111849	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151111849	151111849	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151111849	151111849	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48063015	48063015	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48063015	48063015	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48063015	48063015	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94776131	94776131	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94776131	94776131	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94776131	94776131	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61324130	61324130	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61324833	61324833	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61324130	61324130	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61324833	61324833	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61324130	61324130	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB7	8710	broad.mit.edu	37	18	61471398	61471398	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB7	8710	broad.mit.edu	37	18	61471398	61471398	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB8	5271	broad.mit.edu	37	18	61654176	61654176	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB8	5271	broad.mit.edu	37	18	61654176	61654176	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB8	5271	broad.mit.edu	37	18	61654176	61654176	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERTAD2	9792	broad.mit.edu	37	2	64863748	64863748	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERTAD2	9792	broad.mit.edu	37	2	64863748	64863748	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERTAD2	9792	broad.mit.edu	37	2	64863748	64863748	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179982217	179982217	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179982217	179982217	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179982217	179982217	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179989359	179989359	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26707998	26707998	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26707998	26707998	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCA	6442	broad.mit.edu	37	17	48245036	48245036	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCA	6442	broad.mit.edu	37	17	48245036	48245036	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK196	84197	broad.mit.edu	37	8	42977158	42977158	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK196	84197	broad.mit.edu	37	8	42977158	42977158	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK196	84197	broad.mit.edu	37	8	42977158	42977158	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP5L	80851	broad.mit.edu	37	1	249107242	249107242	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP5L	80851	broad.mit.edu	37	1	249107242	249107242	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP5L	80851	broad.mit.edu	37	1	249107242	249107242	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49183051	49183051	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49183051	49183051	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49183051	49183051	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52031154	52031154	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52031154	52031154	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIN3B	23309	broad.mit.edu	37	19	16962104	16962104	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIN3B	23309	broad.mit.edu	37	19	16962104	16962104	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232626586	232626586	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232626586	232626586	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232626586	232626586	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164777158	164777158	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164777158	164777158	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164727306	164727306	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164777158	164777158	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAIN2	57606	broad.mit.edu	37	4	48381849	48381849	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAIN2	57606	broad.mit.edu	37	4	48381849	48381849	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAIN2	57606	broad.mit.edu	37	4	48381849	48381849	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160721246	160721246	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160721246	160721246	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160721246	160721246	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127516628	127516628	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127516628	127516628	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127516628	127516628	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44673596	44673596	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44673596	44673596	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44673596	44673596	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A1	6564	broad.mit.edu	37	13	99358625	99358625	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A11	55867	broad.mit.edu	37	11	64330024	64330024	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A11	55867	broad.mit.edu	37	11	64330024	64330024	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A3	57419	broad.mit.edu	37	20	19634836	19634836	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A3	57419	broad.mit.edu	37	20	19634836	19634836	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A3	57419	broad.mit.edu	37	20	19634836	19634836	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A4	123041	broad.mit.edu	37	14	92900439	92900439	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A4	123041	broad.mit.edu	37	14	92900439	92900439	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92406380	92406380	+	Intron	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92406380	92406380	+	Intron	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85486830	85486830	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85486830	85486830	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85486830	85486830	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A2	9153	broad.mit.edu	37	15	45557991	45557991	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A2	9153	broad.mit.edu	37	15	45557991	45557991	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A1	6519	broad.mit.edu	37	2	44503190	44503190	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A2	84102	broad.mit.edu	37	12	105255030	105255030	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A2	84102	broad.mit.edu	37	12	105255030	105255030	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108123471	108123471	+	Splice_Site	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108123471	108123471	+	Splice_Site	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108123471	108123471	+	Splice_Site	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75683465	75683465	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75683465	75683465	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162799419	162799419	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72319400	72319400	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72166001	72166001	+	Intron	SNP	G	T	T	rs145370090	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72319400	72319400	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72166001	72166001	+	Intron	SNP	G	T	T	rs145370090	by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72319400	72319400	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A1	6523	broad.mit.edu	37	22	32482262	32482262	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A1	6523	broad.mit.edu	37	22	32482262	32482262	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A1	6523	broad.mit.edu	37	22	32482262	32482262	+	Silent	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32631037	32631037	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32631037	32631037	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32631037	32631037	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85279239	85279239	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85279239	85279239	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85279239	85279239	+	Silent	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1213681	1213681	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1213681	1213681	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20623178	20623178	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20649683	20649683	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20649685	20649685	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20668466	20668466	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20623178	20623178	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20649683	20649683	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20649685	20649685	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20668466	20668466	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20623178	20623178	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20649683	20649683	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20649685	20649685	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20668466	20668466	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170204287	170204287	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A7	9056	broad.mit.edu	37	14	23242826	23242826	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A7	9056	broad.mit.edu	37	14	23242826	23242826	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A7	9056	broad.mit.edu	37	14	23242826	23242826	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40657385	40657385	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40657385	40657385	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40657385	40657385	+	Silent	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144903924	144903924	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144903924	144903924	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144903924	144903924	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11107154	11107154	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11107355	11107355	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11107154	11107154	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11107355	11107355	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11107160	11107160	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95197502	95197502	+	Silent	SNP	G	T	T	rs111425618		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95197502	95197502	+	Silent	SNP	G	T	T	rs111425618		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95197502	95197502	+	Silent	SNP	G	T	T	rs111425618		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMR3A	26952	broad.mit.edu	37	4	71227951	71227951	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMR3A	26952	broad.mit.edu	37	4	71227951	71227951	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMR3A	26952	broad.mit.edu	37	4	71227951	71227951	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD5	10322	broad.mit.edu	37	2	73447441	73447441	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD5	10322	broad.mit.edu	37	2	73447441	73447441	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96953335	96953335	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96953335	96953335	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96953335	96953335	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP48	154007	broad.mit.edu	37	6	7594075	7594075	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP48	154007	broad.mit.edu	37	6	7594075	7594075	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP48	154007	broad.mit.edu	37	6	7594075	7594075	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPN	6638	broad.mit.edu	37	15	25207169	25207169	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPN	6638	broad.mit.edu	37	15	25207169	25207169	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX20	124460	broad.mit.edu	37	16	50709903	50709903	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX20	124460	broad.mit.edu	37	16	50709903	50709903	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX20	124460	broad.mit.edu	37	16	50709903	50709903	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106675467	106675467	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	107012488	107012488	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106675467	106675467	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	107012488	107012488	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	107012488	107012488	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA3	124912	broad.mit.edu	37	17	31324155	31324155	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA3	124912	broad.mit.edu	37	17	31324155	31324155	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214794857	214794857	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214794857	214794857	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118609283	118609283	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN3	139067	broad.mit.edu	37	X	142605176	142605176	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN3	139067	broad.mit.edu	37	X	142605176	142605176	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN3	139067	broad.mit.edu	37	X	142605176	142605176	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPARC	6678	broad.mit.edu	37	5	151042996	151042996	+	3'UTR	SNP	G	A	A	rs147077348	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPARC	6678	broad.mit.edu	37	5	151042996	151042996	+	3'UTR	SNP	G	A	A	rs147077348	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPARC	6678	broad.mit.edu	37	5	151042996	151042996	+	3'UTR	SNP	G	A	A	rs147077348	by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172835526	172835526	+	5'UTR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172835526	172835526	+	5'UTR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172835526	172835526	+	5'UTR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753908	35753908	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753908	35753908	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753908	35753908	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK6	404203	broad.mit.edu	37	5	147585796	147585803	+	Intron	DEL	ACCTAACC	-	-	rs62388546		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE1	56907	broad.mit.edu	37	18	12479746	12479746	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE1	56907	broad.mit.edu	37	18	12479746	12479746	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE1	56907	broad.mit.edu	37	18	12479746	12479746	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167713350	167713350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167713350	167713350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167713350	167713350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPR	6697	broad.mit.edu	37	2	73115540	73115540	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPR	6697	broad.mit.edu	37	2	73115540	73115540	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPR	6697	broad.mit.edu	37	2	73115540	73115540	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158583603	158583603	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158596837	158596837	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158583603	158583603	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158596837	158596837	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158583603	158583603	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158596837	158596837	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRA1	10011	broad.mit.edu	37	5	139931628	139931629	+	In_Frame_Ins	INS	-	GTC	GTC	rs148588257	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SREBF2	6721	broad.mit.edu	37	22	42271363	42271363	+	Missense_Mutation	SNP	G	A	A	rs141522422	byFrequency;by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38031335	38031335	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38031335	38031335	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38031335	38031335	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SS18L1	26039	broad.mit.edu	37	20	60740594	60740594	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SS18L1	26039	broad.mit.edu	37	20	60740594	60740594	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48209509	48209509	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48209509	48209509	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48209509	48209509	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68442866	68442866	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68442866	68442866	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD10	10809	broad.mit.edu	37	11	72492187	72492187	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD10	10809	broad.mit.edu	37	11	72492187	72492187	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD10	10809	broad.mit.edu	37	11	72492187	72492187	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48896946	48896946	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48896946	48896946	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48896946	48896946	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOX1	219736	broad.mit.edu	37	10	70645915	70645915	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOX1	219736	broad.mit.edu	37	10	70645915	70645915	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOX1	219736	broad.mit.edu	37	10	70645915	70645915	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUCLA2	8803	broad.mit.edu	37	13	48523795	48523795	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113194661	113194662	+	Intron	INS	-	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113194661	113194662	+	Intron	INS	-	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113194661	113194662	+	Intron	INS	-	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVOP	55530	broad.mit.edu	37	12	109313388	109313388	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE2	84144	broad.mit.edu	37	1	85648858	85648858	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE2	84144	broad.mit.edu	37	1	85648858	85648858	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE2	84144	broad.mit.edu	37	1	85648858	85648858	+	Silent	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	32934062	32934062	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	32934062	32934062	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	32934062	32934062	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119952637	119952637	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119952637	119952637	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119952637	119952637	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYPL2	284612	broad.mit.edu	37	1	110019410	110019410	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYPL2	284612	broad.mit.edu	37	1	110019410	110019410	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYPL2	284612	broad.mit.edu	37	1	110019410	110019410	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT2	127833	broad.mit.edu	37	1	202571229	202571229	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT2	127833	broad.mit.edu	37	1	202571229	202571229	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT2	127833	broad.mit.edu	37	1	202571229	202571229	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7439167	7439167	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7439167	7439167	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7439167	7439167	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32632534	32632534	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32632534	32632534	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32632534	32632534	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R16	50833	broad.mit.edu	37	7	122634999	122634999	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R16	50833	broad.mit.edu	37	7	122634999	122634999	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R16	50833	broad.mit.edu	37	7	122634999	122634999	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D16	125058	broad.mit.edu	37	17	77925310	77925310	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D16	125058	broad.mit.edu	37	17	77925310	77925310	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D16	125058	broad.mit.edu	37	17	77925310	77925310	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D19	55296	broad.mit.edu	37	4	26585922	26585922	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38097635	38097636	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38097635	38097636	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38097635	38097636	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60348599	60348599	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60348599	60348599	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101648757	101648757	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101648757	101648757	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101648757	101648757	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBKBP1	9755	broad.mit.edu	37	17	45777191	45777191	+	Intron	DEL	T	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBP	6908	broad.mit.edu	37	6	170871052	170871052	+	Silent	SNP	G	A	A	rs112083427		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBP	6908	broad.mit.edu	37	6	170871052	170871052	+	Silent	SNP	G	A	A	rs112083427		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114841479	114841479	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114841479	114841479	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114841479	114841479	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179621246	179621246	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179621246	179621246	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179621246	179621246	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT4	150483	broad.mit.edu	37	2	95539155	95539155	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT4	150483	broad.mit.edu	37	2	95539155	95539155	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50796436	50796436	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50796436	50796436	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50796436	50796436	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP3	51270	broad.mit.edu	37	X	132351139	132351139	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP3	51270	broad.mit.edu	37	X	132351141	132351141	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP3	51270	broad.mit.edu	37	X	132351139	132351139	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP3	51270	broad.mit.edu	37	X	132351141	132351141	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP3	51270	broad.mit.edu	37	X	132351139	132351139	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP3	51270	broad.mit.edu	37	X	132351141	132351141	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115624234	115624234	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115624234	115624234	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF3	7033	broad.mit.edu	37	21	43733472	43733473	+	Intron	DEL	GT	-	-	rs112921519		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF3	7033	broad.mit.edu	37	21	43733472	43733473	+	Intron	DEL	GT	-	-	rs112921519		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR2	7048	broad.mit.edu	37	3	30732969	30732969	+	Missense_Mutation	SNP	C	T	T	rs104893810		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR2	7048	broad.mit.edu	37	3	30732969	30732969	+	Missense_Mutation	SNP	C	T	T	rs104893810		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR2	7048	broad.mit.edu	37	3	30732969	30732969	+	Missense_Mutation	SNP	C	T	T	rs104893810		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43801863	43801863	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43801863	43801863	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43801863	43801863	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE3	7090	broad.mit.edu	37	15	70358349	70358349	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98146809	98146809	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98146809	98146809	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98146809	98146809	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	62993362	62993362	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	62993362	62993362	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	62993362	62993362	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMBIM6	7009	broad.mit.edu	37	12	50135944	50135944	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMBIM6	7009	broad.mit.edu	37	12	50152945	50152946	+	Intron	INS	-	GG	GG			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126139092	126139092	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126139092	126139092	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126139092	126139092	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM161A	54929	broad.mit.edu	37	19	19231472	19231472	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM168	64418	broad.mit.edu	37	7	112424746	112424746	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM168	64418	broad.mit.edu	37	7	112424746	112424746	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM168	64418	broad.mit.edu	37	7	112424746	112424746	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM47	83604	broad.mit.edu	37	X	34648523	34648523	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM47	83604	broad.mit.edu	37	X	34648523	34648523	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM47	83604	broad.mit.edu	37	X	34648523	34648523	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133723298	133723298	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133723298	133723298	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133723298	133723298	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87B	84910	broad.mit.edu	37	2	112870473	112870473	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87B	84910	broad.mit.edu	37	2	112870473	112870473	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS3	64699	broad.mit.edu	37	21	43796717	43796717	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS3	64699	broad.mit.edu	37	21	43796717	43796717	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS3	64699	broad.mit.edu	37	21	43796717	43796717	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS6	164656	broad.mit.edu	37	22	37480376	37480376	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29725270	29725270	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT2	7139	broad.mit.edu	37	1	201333393	201333393	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT2	7139	broad.mit.edu	37	1	201333393	201333393	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT2	7139	broad.mit.edu	37	1	201333393	201333393	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175037033	175037033	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175037033	175037033	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175037033	175037033	+	5'UTR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM40	10452	broad.mit.edu	37	19	45406198	45406198	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM40	10452	broad.mit.edu	37	19	45406198	45406198	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM40	10452	broad.mit.edu	37	19	45406198	45406198	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53INP1	94241	broad.mit.edu	37	8	95952305	95952305	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53INP1	94241	broad.mit.edu	37	8	95952305	95952305	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53INP1	94241	broad.mit.edu	37	8	95952305	95952305	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577082	7577082	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577082	7577082	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577082	7577082	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72416411	72416411	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1457680	1457680	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1457680	1457680	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10920118	10920118	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10920118	10920118	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10920118	10920118	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30388777	30388777	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30388777	30388777	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30388777	30388777	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118005390	118005390	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118005823	118005823	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118005390	118005390	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118005823	118005823	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118005390	118005390	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118005823	118005823	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAT1	50852	broad.mit.edu	37	3	108568149	108568149	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	120008510	120008510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	120008510	120008510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM61	391712	broad.mit.edu	37	4	165891177	165891177	+	5'UTR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM61	391712	broad.mit.edu	37	4	165891177	165891177	+	5'UTR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM61	391712	broad.mit.edu	37	4	165891177	165891177	+	5'UTR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM69	140691	broad.mit.edu	37	15	45059966	45059966	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM69	140691	broad.mit.edu	37	15	45059966	45059966	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM69	140691	broad.mit.edu	37	15	45059966	45059966	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14419784	14419784	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14419784	14419784	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72951883	72951883	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72951883	72951883	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73426112	73426112	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73426112	73426112	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73426112	73426112	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31767328	31767328	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31767328	31767328	+	3'UTR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSIX	9383	broad.mit.edu	37	X	73042079	73042079	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSIX	9383	broad.mit.edu	37	X	73042079	73042079	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSIX	9383	broad.mit.edu	37	X	73042079	73042079	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPY1	7258	broad.mit.edu	37	Y	9305908	9305908	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPY1	7258	broad.mit.edu	37	Y	9305908	9305908	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPY1	7258	broad.mit.edu	37	Y	9305908	9305908	+	Splice_Site	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL6	284076	broad.mit.edu	37	17	46863434	46863434	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL6	284076	broad.mit.edu	37	17	46863434	46863434	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL6	284076	broad.mit.edu	37	17	46863434	46863434	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179584084	179584084	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179584084	179584084	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179584084	179584084	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA8	51807	broad.mit.edu	37	22	18613793	18613793	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA8	51807	broad.mit.edu	37	22	18613793	18613793	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA8	51807	broad.mit.edu	37	22	18613793	18613793	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15519578	15519578	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15519578	15519578	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118263361	118263361	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118263361	118263361	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118263361	118263361	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39511522	39511522	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39511522	39511522	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39511522	39511522	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69520040	69520040	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69520040	69520040	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69520040	69520040	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69973836	69973836	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69973836	69973836	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69973836	69973836	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34801976	34801976	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULBP1	80329	broad.mit.edu	37	6	150289600	150289600	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULBP1	80329	broad.mit.edu	37	6	150289600	150289600	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96091525	96091525	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96140295	96140295	+	Silent	SNP	G	T	T	rs145160489		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96091525	96091525	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96140295	96140295	+	Silent	SNP	G	T	T	rs145160489		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96091525	96091525	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF1	5976	broad.mit.edu	37	19	18967552	18967552	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216062334	216062334	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216251604	216251604	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216251649	216251649	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216372980	216372980	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216595290	216595290	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216062334	216062334	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216251604	216251604	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216251649	216251649	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216372980	216372980	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216595290	216595290	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216062334	216062334	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216251604	216251604	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216251649	216251649	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216372980	216372980	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216595290	216595290	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113674068	113674068	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113674068	113674068	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113674068	113674068	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58256678	58256678	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58256678	58256678	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58256678	58256678	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41064746	41064746	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41064746	41064746	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41064746	41064746	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31205085	31205085	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31205085	31205085	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31205085	31205085	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144745117	144745117	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144745117	144745117	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144745117	144745117	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107446739	107446739	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111440136	111440136	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37812973	37812973	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42400410	42400410	+	IGR	DEL	C	-	-	rs74186261		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	45689240	45689240	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54172522	54172523	+	IGR	DNP	CT	AG	AG			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	9764251	9764251	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110697228	110697228	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	122906730	122906730	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	1814135	1814135	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18210621	18210621	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18909147	18909147	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	22334586	22334586	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59056319	59056319	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129499998	129499998	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	27287962	27287962	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38472831	38472831	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38600668	38600668	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	52294981	52294981	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	56775168	56775168	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	60206271	60206271	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68947714	68947714	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	25780395	25780395	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	26691796	26691796	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53774484	53774484	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	55015114	55015114	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	66362627	66362627	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	67841075	67841075	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68476558	68476558	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19421531	19421531	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19476462	19476462	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21009933	21009933	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22483148	22483148	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	12031400	12031400	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32168952	32168952	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32368327	32368327	+	IGR	SNP	C	A	A	rs118051995	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32490280	32490280	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32619363	32619363	+	IGR	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424729	33424729	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16521024	16521024	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16587062	16587062	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	22253249	22253249	+	IGR	DEL	C	-	-	rs140540869		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25410652	25410652	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26080481	26080481	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	32659083	32659083	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52555387	52555387	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	41901518	41901518	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22498653	22498653	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22707569	22707569	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675200	23675200	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	12986429	12986429	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903610	148903610	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149104003	149104003	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149130281	149130281	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158493434	158493434	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242079670	242079670	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247394808	247394808	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247769828	247769828	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	249066166	249066166	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	21025079	21025079	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34987090	34987090	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	108537187	108537187	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	110766901	110766901	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131266479	131266479	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133020607	133020607	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162358532	162358532	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194994188	194994188	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210012308	210012308	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210045771	210045771	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	231438618	231438618	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49142521	49142521	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52798044	52798044	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81423713	81423713	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	88422479	88422479	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458721	90458721	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91933197	91933197	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92075494	92075495	+	IGR	INS	-	TGT	TGT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116364879	116364879	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	119354552	119354552	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	146066093	146066093	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147309166	147309166	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148704160	148704161	+	IGR	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	27744833	27744833	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75386165	75386165	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75986693	75986693	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76484301	76484301	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	104494270	104494270	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	136487308	136487308	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4086177	4086177	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9390673	9390673	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114892	117114892	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910266	25910266	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910987	25910987	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	85383918	85383918	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104465923	104465923	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121729993	121729993	+	IGR	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	160132991	160132991	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	160133674	160133674	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	50825340	50825340	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	54350089	54350089	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66803810	66803810	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124121274	124121274	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	158415669	158415669	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	42835485	42835485	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	50911488	50911488	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55001712	55001712	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56358900	56358900	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57218086	57218086	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57485015	57485015	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354529	63354529	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88268877	88268877	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	111821851	111821851	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47609298	47609298	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48114627	48114627	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653252	50653252	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	55435691	55435691	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62003383	62003383	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	67897932	67897932	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	102067896	102067896	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	124282543	124282543	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	141031633	141031633	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68358204	68358204	+	IGR	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69830179	69830179	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	81652186	81652186	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	98175531	98175531	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75250080	75250081	+	IGR	DNP	GG	TT	TT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14093000	14093000	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14554990	14554990	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	3551082	3551082	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9152473	9152473	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107446739	107446739	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111440136	111440136	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37812973	37812973	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	45689240	45689240	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54172522	54172523	+	IGR	DNP	CT	AG	AG			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	9764251	9764251	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110697228	110697228	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	122906730	122906730	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	1814135	1814135	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18210621	18210621	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18909147	18909147	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	22334586	22334586	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59056319	59056319	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129499998	129499998	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	27287962	27287962	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38472831	38472831	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38600668	38600668	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	52294981	52294981	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	56775168	56775168	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	60206271	60206271	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68947714	68947714	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	25780395	25780395	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	26691796	26691796	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53774484	53774484	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	55015114	55015114	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	66362627	66362627	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	67841075	67841075	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68476558	68476558	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19421531	19421531	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19476462	19476462	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21009933	21009933	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22483148	22483148	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	29033836	29033836	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	12031400	12031400	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32168952	32168952	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32368327	32368327	+	IGR	SNP	C	A	A	rs118051995	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32490280	32490280	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32619363	32619363	+	IGR	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424729	33424729	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16521024	16521024	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16587062	16587062	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25410652	25410652	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26080481	26080481	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	32659083	32659083	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52555387	52555387	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	41901518	41901518	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22498653	22498653	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22707569	22707569	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675200	23675200	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	12986429	12986429	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903610	148903610	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149104003	149104003	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149130281	149130281	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158493434	158493434	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242079670	242079670	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247394808	247394808	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247769828	247769828	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	249066166	249066166	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	21025079	21025079	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34987090	34987090	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	108537187	108537187	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	110766901	110766901	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131266479	131266479	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133020607	133020607	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162358532	162358532	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194994188	194994188	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210012308	210012308	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210045771	210045771	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	231438618	231438618	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49142521	49142521	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52798044	52798044	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81423713	81423713	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	88422479	88422479	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458721	90458721	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91933197	91933197	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116364879	116364879	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	119354552	119354552	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	146066093	146066093	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147309166	147309166	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148704160	148704161	+	IGR	DNP	CC	AA	AA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	27744833	27744833	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75386165	75386165	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75986693	75986693	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76484301	76484301	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	104494270	104494270	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	136487308	136487308	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4086177	4086177	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9390673	9390673	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114892	117114892	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910266	25910266	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910987	25910987	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104465923	104465923	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121729993	121729993	+	IGR	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	160132991	160132991	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	160133674	160133674	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	50825340	50825340	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	54350089	54350089	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66803810	66803810	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124121274	124121274	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	158415669	158415669	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	42835485	42835485	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	50911488	50911488	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55001712	55001712	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55804748	55804748	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56358900	56358900	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57218086	57218086	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57485015	57485015	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57669751	57669751	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354529	63354529	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88268877	88268877	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	111821851	111821851	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47609298	47609298	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48114627	48114627	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653252	50653252	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	55435691	55435691	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62003383	62003383	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	67897932	67897932	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	102067896	102067896	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	124282543	124282543	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	141031633	141031633	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68358204	68358204	+	IGR	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69830179	69830179	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	81652186	81652186	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	98175531	98175531	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139114564	139114564	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	3285225	3285225	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64628038	64628038	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75250080	75250081	+	IGR	DNP	GG	TT	TT			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14093000	14093000	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14554990	14554990	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	3551082	3551082	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9152473	9152473	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107446739	107446739	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111440136	111440136	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37812973	37812973	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42400668	42400668	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	45689240	45689240	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54172522	54172523	+	IGR	DNP	CT	AG	AG			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	6041879	6041879	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	85638347	85638348	+	IGR	DNP	TG	CT	CT			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	9764251	9764251	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110697228	110697228	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	112384691	112384691	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	122906730	122906730	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	1814135	1814135	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18210621	18210621	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18909147	18909147	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	22334586	22334586	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4743992	4743992	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55156027	55156027	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55179105	55179105	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55482463	55482463	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58111369	58111369	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58155463	58155463	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59056319	59056319	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	87230702	87230702	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89467921	89467921	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126166742	126166742	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129499998	129499998	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	27287962	27287962	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34319387	34319387	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38472831	38472831	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38600668	38600668	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	60206271	60206271	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111590223	111590223	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	25780395	25780395	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	26691796	26691796	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	55015114	55015114	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	66362627	66362627	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	67841075	67841075	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68476558	68476558	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68485387	68485387	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19421531	19421531	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19476462	19476462	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	31260435	31260435	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	31932213	31932213	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21009933	21009933	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22483148	22483148	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	32679603	32679603	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	12031400	12031400	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32168952	32168952	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424729	33424729	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34783068	34783069	+	IGR	INS	-	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	59788960	59788960	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26080481	26080481	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	32659083	32659083	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52555387	52555387	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14668416	14668416	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	41901518	41901518	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15923391	15923392	+	IGR	INS	-	GGAG	GGAG	rs147515045	by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22498653	22498653	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22707569	22707569	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22793010	22793010	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675200	23675200	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	34513982	34513982	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	12986429	12986429	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148855882	148855882	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903610	148903610	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149104003	149104003	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149130281	149130281	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158493434	158493434	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158494108	158494108	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219055099	219055099	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242079670	242079670	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247394808	247394808	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247769828	247769828	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	249066166	249066166	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	80917096	80917096	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	40627235	40627235	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15309304	15309304	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31809094	31809094	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34987090	34987090	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	108537187	108537187	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	110766901	110766901	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131266479	131266479	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133020527	133020527	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	153734405	153734405	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162358532	162358532	+	IGR	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	177670291	177670291	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	18221821	18221821	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194994073	194994074	+	IGR	DNP	CC	AA	AA			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194994188	194994188	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210045771	210045771	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	231438618	231438618	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49142521	49142521	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52798044	52798044	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	76333549	76333549	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81423713	81423713	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458721	90458721	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91933197	91933197	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116364879	116364879	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	119354552	119354552	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	120525021	120525021	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	146066093	146066093	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	148704160	148704161	+	IGR	DNP	CC	AA	AA			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	152518391	152518391	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	27744833	27744833	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75986693	75986693	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76484301	76484301	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	104494270	104494270	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135967840	135967840	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	136292898	136292898	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4086177	4086177	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9390673	9390673	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114892	117114892	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	175467878	175467878	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910266	25910266	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910987	25910987	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	56719043	56719043	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7300012	7300012	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	85383918	85383918	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97073679	97073679	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104465923	104465923	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121729993	121729993	+	IGR	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	160133674	160133674	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	50825340	50825340	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66803810	66803810	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	87142063	87142063	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	109638826	109638826	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124121274	124121274	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141562828	141562828	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144702818	144702818	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	158415669	158415669	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	42835485	42835485	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	50911488	50911488	+	IGR	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53254995	53254995	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55001712	55001712	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56358900	56358900	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57159623	57159623	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57669751	57669751	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354529	63354529	+	IGR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88268877	88268877	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	111821851	111821851	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138709376	138709376	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47609298	47609298	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653252	50653252	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	55435691	55435691	+	IGR	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62003383	62003383	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	67897932	67897932	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	102067896	102067896	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	124282543	124282543	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	65626633	65626633	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69499193	69499193	+	IGR	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69830309	69830309	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	81652186	81652186	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	98175531	98175531	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144712899	144712899	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75250080	75250081	+	IGR	DNP	GG	TT	TT			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87352184	87352184	+	IGR	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89544647	89544647	+	IGR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14093000	14093000	+	IGR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14554990	14554990	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	3551082	3551082	+	IGR	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9152473	9152473	+	IGR	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70765433	70765433	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70765433	70765433	+	Silent	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS	7407	broad.mit.edu	37	6	31748466	31748466	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS	7407	broad.mit.edu	37	6	31748466	31748466	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS	7407	broad.mit.edu	37	6	31748466	31748466	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100205158	100205158	+	Silent	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100709121	100709121	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98844805	98844805	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98844805	98844805	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98844805	98844805	+	Intron	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF2	10163	broad.mit.edu	37	1	27734858	27734858	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF2	10163	broad.mit.edu	37	1	27734858	27734858	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF2	10163	broad.mit.edu	37	1	27734858	27734858	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49050698	49050698	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49050698	49050698	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49050698	49050698	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR89	112840	broad.mit.edu	37	14	64065848	64065848	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR89	112840	broad.mit.edu	37	14	64065848	64065848	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR89	112840	broad.mit.edu	37	14	64065848	64065848	+	Silent	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC6	140870	broad.mit.edu	37	20	44163207	44163207	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC6	140870	broad.mit.edu	37	20	44163207	44163207	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC6	140870	broad.mit.edu	37	20	44163207	44163207	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI1	55062	broad.mit.edu	37	17	66430737	66430737	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI1	55062	broad.mit.edu	37	17	66430737	66430737	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI1	55062	broad.mit.edu	37	17	66430737	66430737	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI2	26100	broad.mit.edu	37	7	5256877	5256877	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI2	26100	broad.mit.edu	37	7	5256877	5256877	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI2	26100	broad.mit.edu	37	7	5256877	5256877	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WISP1	8840	broad.mit.edu	37	8	134225097	134225097	+	Intron	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WISP1	8840	broad.mit.edu	37	8	134225097	134225097	+	Intron	DEL	C	-	-			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WISP1	8840	broad.mit.edu	37	8	134203506	134203506	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WT1	7490	broad.mit.edu	37	11	32421406	32421406	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WT1	7490	broad.mit.edu	37	11	32421406	32421406	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWTR1	25937	broad.mit.edu	37	3	149374727	149374727	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWTR1	25937	broad.mit.edu	37	3	149374727	149374727	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWTR1	25937	broad.mit.edu	37	3	149374727	149374727	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168102029	168102029	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168106863	168106863	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168102029	168102029	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168106863	168106863	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168102029	168102029	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168106863	168106863	+	Silent	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28128626	28128626	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28128626	28128626	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28128626	28128626	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17235282	17235282	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17235282	17235282	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIPF1	54432	broad.mit.edu	37	1	54348884	54348884	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIPF1	54432	broad.mit.edu	37	1	54348884	54348884	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100385562	100385596	+	Frame_Shift_Del	DEL	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	-	rs148032175	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138745860	138745860	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138764850	138764850	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138745860	138745860	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138764850	138764850	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138745860	138745860	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138764850	138764850	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC7	84186	broad.mit.edu	37	9	37305738	37305738	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC7	84186	broad.mit.edu	37	9	37305738	37305738	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC7	84186	broad.mit.edu	37	9	37305738	37305738	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC13	54503	broad.mit.edu	37	11	19197518	19197518	+	3'UTR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC13	54503	broad.mit.edu	37	11	19197518	19197518	+	3'UTR	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC13	54503	broad.mit.edu	37	11	19197518	19197518	+	3'UTR	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814500	106814500	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814500	106814500	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814500	106814500	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT1	84460	broad.mit.edu	37	X	101166871	101166871	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT1	84460	broad.mit.edu	37	X	101166871	101166871	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT1	84460	broad.mit.edu	37	X	101166871	101166871	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44797368	44797368	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44797368	44797368	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM6	9204	broad.mit.edu	37	1	35480537	35480537	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM6	9204	broad.mit.edu	37	1	35480537	35480537	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM6	9204	broad.mit.edu	37	1	35480537	35480537	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF131	7690	broad.mit.edu	37	5	43123436	43123436	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF131	7690	broad.mit.edu	37	5	43123436	43123436	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22193727	22193727	+	5'UTR	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF229	7772	broad.mit.edu	37	19	44932364	44932364	+	3'UTR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF229	7772	broad.mit.edu	37	19	44932364	44932364	+	3'UTR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF337	26152	broad.mit.edu	37	20	25667111	25667111	+	5'UTR	SNP	G	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF383	163087	broad.mit.edu	37	19	37726793	37726793	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF383	163087	broad.mit.edu	37	19	37726793	37726793	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF383	163087	broad.mit.edu	37	19	37726793	37726793	+	Intron	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188289	57188289	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188826	57188826	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188289	57188289	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188826	57188826	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188289	57188289	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30936620	30936620	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30936620	30936620	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30936620	30936620	+	Silent	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF559	84527	broad.mit.edu	37	19	9450100	9450100	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF559	84527	broad.mit.edu	37	19	9450100	9450100	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF559	84527	broad.mit.edu	37	19	9450100	9450100	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF563	147837	broad.mit.edu	37	19	12432051	12432051	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23941486	23941486	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23941486	23941486	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23941486	23941486	+	Intron	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF70	7621	broad.mit.edu	37	22	24087463	24087463	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF70	7621	broad.mit.edu	37	22	24087463	24087463	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF70	7621	broad.mit.edu	37	22	24087463	24087463	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF780A	284323	broad.mit.edu	37	19	40587733	40587735	+	Missense_Mutation	TNP	CCG	AAA	AAA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF780A	284323	broad.mit.edu	37	19	40587733	40587735	+	Missense_Mutation	TNP	CCG	AAA	AAA			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF780A	284323	broad.mit.edu	37	19	40587735	40587735	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF814	730051	broad.mit.edu	37	19	58384132	58384132	+	3'UTR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF814	730051	broad.mit.edu	37	19	58384132	58384132	+	3'UTR	SNP	T	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF814	730051	broad.mit.edu	37	19	58384132	58384132	+	3'UTR	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF99	7652	broad.mit.edu	37	19	22951200	22951200	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZWILCH	55055	broad.mit.edu	37	15	66824545	66824545	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZWILCH	55055	broad.mit.edu	37	15	66824545	66824545	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30942511	30942511	+	Intron	SNP	C	A	A	rs148173051	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64660144	64660144	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102291329	102291329	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32265006	32265006	+	RNA	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16723389	16723389	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20332060	20332060	+	RNA	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25758166	25758166	+	RNA	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	25033549	25033549	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120077249	120077249	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143223709	143223709	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89231417	89231417	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89417246	89417246	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89428224	89428224	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89459127	89459127	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121640	90121640	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121720	90121720	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166307	85166307	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9897066	9897066	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142120421	142120421	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142143691	142143691	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142250954	142250954	+	Intron	SNP	G	T	T	rs361438		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142471438	142471438	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	88457733	88457733	+	RNA	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30942511	30942511	+	Intron	SNP	C	A	A	rs148173051	by1000genomes	TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64660144	64660144	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102291329	102291329	+	Intron	SNP	G	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32265006	32265006	+	RNA	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16723389	16723389	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20332060	20332060	+	RNA	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25758166	25758166	+	RNA	SNP	C	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	25033549	25033549	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120077249	120077249	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143223709	143223709	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89231417	89231417	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89417246	89417246	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89428224	89428224	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89459127	89459127	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121640	90121640	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121720	90121720	+	Intron	SNP	T	C	C			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166307	85166307	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9897066	9897066	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142120421	142120421	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142143691	142143691	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142250954	142250954	+	Intron	SNP	G	T	T	rs361438		TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142471438	142471438	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	88457733	88457733	+	RNA	SNP	G	A	A			TCGA-44-2668-01A-01D-0969-08	TCGA-44-2668-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	125203649	125203649	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30942511	30942511	+	Intron	SNP	C	A	A	rs148173051	by1000genomes	TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64660144	64660144	+	Intron	SNP	A	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22440871	22440871	+	5'Flank	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32265006	32265006	+	RNA	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16723389	16723389	+	RNA	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20332060	20332060	+	RNA	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25758166	25758166	+	RNA	SNP	C	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	25033549	25033549	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120077249	120077249	+	5'Flank	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89231417	89231417	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89417246	89417246	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89417326	89417326	+	Intron	SNP	A	C	C			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89428224	89428224	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89459127	89459127	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89470236	89470236	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90121640	90121640	+	Intron	SNP	T	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95374522	95374522	+	RNA	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166307	85166307	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9897066	9897066	+	Intron	SNP	C	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142099947	142099947	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142120421	142120421	+	Intron	SNP	A	G	G			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142143691	142143691	+	Intron	SNP	G	T	T			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142250954	142250954	+	Intron	SNP	G	T	T	rs361438		TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142471438	142471438	+	Intron	SNP	C	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	88457733	88457733	+	RNA	SNP	G	A	A			TCGA-44-2668-01A-01W-0928-08	TCGA-44-2668-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
