Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA13	154664	broad.mit.edu	37	7	48320968	48320968	+	Nonsense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48520676	48520676	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA2	20	broad.mit.edu	37	9	139910907	139910907	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA2	20	broad.mit.edu	37	9	139913625	139913625	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB10	23456	broad.mit.edu	37	1	229675222	229675222	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB10	23456	broad.mit.edu	37	1	229675224	229675224	+	Missense_Mutation	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB4	5244	broad.mit.edu	37	7	87037453	87037453	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48234395	48234395	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE2	59272	broad.mit.edu	37	X	15588557	15588557	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT11	26027	broad.mit.edu	37	1	55080315	55080315	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT9	23597	broad.mit.edu	37	X	23722141	23722141	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT9	23597	broad.mit.edu	37	X	23723693	23723693	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20429402	20429402	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1A	10121	broad.mit.edu	37	10	104247996	104247996	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM22	53616	broad.mit.edu	37	7	87765391	87765391	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106805666	106805666	+	Splice_Site	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106963337	106963337	+	RNA	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5262963	5262963	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	128994400	128994400	+	Nonsense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18574147	18574147	+	Silent	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7520843	7520843	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131792865	131792865	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31103011	31103011	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOQ	9370	broad.mit.edu	37	3	186570891	186570891	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1A	148	broad.mit.edu	37	8	26614361	26614361	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF1	4299	broad.mit.edu	37	4	88011124	88011124	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP2	116986	broad.mit.edu	37	12	58127798	58127798	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGGF1	55109	broad.mit.edu	37	5	76342119	76342119	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247025359	247025359	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C2	1646	broad.mit.edu	37	10	5040858	5040859	+	Frame_Shift_Del	DEL	GG	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMDHD1	144193	broad.mit.edu	37	12	96361533	96361533	+	Splice_Site	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41519408	41519408	+	Nonsense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114275528	114275528	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37433954	37433954	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1A	23294	broad.mit.edu	37	6	35046481	35046481	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2A1	160	broad.mit.edu	37	19	50296349	50296349	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21228767	21228767	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APP	351	broad.mit.edu	37	21	27354613	27354613	+	Intron	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP3	26286	broad.mit.edu	37	22	43195156	43195156	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4A	5926	broad.mit.edu	37	14	58827597	58827597	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPC5	10092	broad.mit.edu	37	1	183599587	183599587	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35778767	35778767	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB17	127247	broad.mit.edu	37	1	76397599	76397599	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119625830	119625830	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31323882	31323882	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASZ1	136991	broad.mit.edu	37	7	117025861	117025861	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113465094	113465094	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A5	344905	broad.mit.edu	37	3	193039469	193039469	+	Splice_Site	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160144384	160144384	+	Missense_Mutation	SNP	G	T	T	rs150078418		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119512634	119512634	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28915207	28915207	+	Intron	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0D2	245972	broad.mit.edu	37	8	87151878	87151878	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1B	9031	broad.mit.edu	37	7	72861464	72861464	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBOX1	8424	broad.mit.edu	37	11	27078781	27078781	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEGAIN	57596	broad.mit.edu	37	14	101004814	101004814	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIP2	663	broad.mit.edu	37	15	59969157	59969157	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD3	22903	broad.mit.edu	37	20	11904038	11904038	+	Missense_Mutation	SNP	G	T	T	rs150807132		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD7	55727	broad.mit.edu	37	14	93709365	93709365	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTG2	7832	broad.mit.edu	37	1	203276294	203276294	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf128	170371	broad.mit.edu	37	10	50363897	50363897	+	3'UTR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf66	220004	broad.mit.edu	37	11	61250008	61250008	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf50	160419	broad.mit.edu	37	12	88381709	88381709	+	Silent	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf23	80209	broad.mit.edu	37	13	39586310	39586310	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf39	56905	broad.mit.edu	37	15	75499431	75499431	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf129	80133	broad.mit.edu	37	1	170914772	170914773	+	Intron	DEL	TG	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf94	84970	broad.mit.edu	37	1	34666517	34666517	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf7	56911	broad.mit.edu	37	21	30464623	30464624	+	Intron	INS	-	ACTCCAGTTTATAGG	ACTCCAGTTTATAGG	rs147901306	by1000genomes	TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf28	51493	broad.mit.edu	37	22	32789859	32789859	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf28	51493	broad.mit.edu	37	22	32792123	32792123	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf40	84417	broad.mit.edu	37	2	106694217	106694217	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf78	388960	broad.mit.edu	37	2	74040979	74040979	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf17	84103	broad.mit.edu	37	4	100445758	100445758	+	Intron	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98947359	98947359	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf34	375444	broad.mit.edu	37	5	43496520	43496520	+	Intron	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41199816	41199816	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf114	85411	broad.mit.edu	37	6	13470384	13470384	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf10	79783	broad.mit.edu	37	7	40228055	40228055	+	Intron	DEL	C	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39306769	39306769	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf21	195827	broad.mit.edu	37	9	99404268	99404268	+	Intron	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf98	158067	broad.mit.edu	37	9	135698510	135698510	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA5A	763	broad.mit.edu	37	16	87936058	87936058	+	Silent	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65147015	65147015	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181549920	181549920	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181706900	181706900	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG6	59285	broad.mit.edu	37	19	54496081	54496081	+	5'UTR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159163171	159163171	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104871047	104871047	+	Missense_Mutation	SNP	C	T	T	rs45464699	byFrequency	TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D2B	387707	broad.mit.edu	37	10	97763952	97763952	+	5'UTR	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC123	84902	broad.mit.edu	37	19	33422323	33422323	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92923775	92923775	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92923777	92923777	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC73	493860	broad.mit.edu	37	11	32663549	32663549	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6291448	6291448	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD180	4064	broad.mit.edu	37	5	66492422	66492422	+	Silent	SNP	G	T	T	rs146337741		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157805682	157805682	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD82	3732	broad.mit.edu	37	11	44621828	44621828	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14C	168448	broad.mit.edu	37	7	48964946	48964946	+	Silent	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227333181	227333181	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPB	1059	broad.mit.edu	37	20	3766048	3766048	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPH	64946	broad.mit.edu	37	5	68491566	68491566	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB	1082	broad.mit.edu	37	19	49558527	49558527	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184104734	184104734	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST1	8534	broad.mit.edu	37	11	45671461	45671461	+	Frame_Shift_Del	DEL	C	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKM	1158	broad.mit.edu	37	19	45811588	45811588	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN14	23562	broad.mit.edu	37	21	37858744	37858744	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC12A	160364	broad.mit.edu	37	12	10131477	10131477	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC12B	387837	broad.mit.edu	37	12	10168005	10168005	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4F	165530	broad.mit.edu	37	2	71043709	71043709	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN2	645104	broad.mit.edu	37	4	17528371	17528371	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMAS	55907	broad.mit.edu	37	12	22214339	22214339	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87655889	87655889	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	124783245	124783245	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103461610	103461610	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189864150	189864150	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107863702	107863702	+	Intron	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10104534	10104535	+	Intron	DNP	CC	AA	AA			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A1	1291	broad.mit.edu	37	21	47410247	47410247	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238289842	238289842	+	Missense_Mutation	SNP	G	T	T	rs34741387	byFrequency;by1000genomes	TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD10	51397	broad.mit.edu	37	5	115469791	115469791	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB1	1360	broad.mit.edu	37	3	148558565	148558565	+	Frame_Shift_Del	DEL	G	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131254166	131254166	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8608933	8608933	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CP	1356	broad.mit.edu	37	3	148927062	148927062	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB2	286204	broad.mit.edu	37	9	126133024	126133024	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIP3	401262	broad.mit.edu	37	6	43276112	43276112	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75941787	75941787	+	Intron	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRLF1	9244	broad.mit.edu	37	19	18710443	18710443	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC1	23373	broad.mit.edu	37	19	18888325	18888325	+	3'UTR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113318176	113318176	+	Intron	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113420594	113420594	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1E	1454	broad.mit.edu	37	22	38776357	38776357	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A2	1459	broad.mit.edu	37	16	58198103	58198103	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND1	1500	broad.mit.edu	37	11	57575995	57575995	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11364842	11364842	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTRC	11330	broad.mit.edu	37	1	15772225	15772225	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17146427	17146427	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf56	63932	broad.mit.edu	37	X	118676546	118676546	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLC2	1539	broad.mit.edu	37	9	105763849	105763849	+	Intron	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143960556	143960556	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP20A1	57404	broad.mit.edu	37	2	204116893	204116893	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH3	9265	broad.mit.edu	37	7	6227205	6227205	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39835296	39835296	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85969820	85969820	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAOA	267012	broad.mit.edu	37	13	106119472	106119472	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L1	139170	broad.mit.edu	37	X	125685987	125685987	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L1	139170	broad.mit.edu	37	X	125686176	125686176	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31287134	31287134	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK3	85443	broad.mit.edu	37	3	36763249	36763249	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX52	11056	broad.mit.edu	37	17	35979858	35979858	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169157543	169157543	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB116	245930	broad.mit.edu	37	20	29891154	29891154	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197514995	197514995	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31577444	31577444	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137170135	137170135	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50119279	50119279	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2139045	2139045	+	3'UTR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX16	8449	broad.mit.edu	37	6	30633333	30633333	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60485886	60485886	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2A	23181	broad.mit.edu	37	21	47976019	47976019	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	85164153	85164153	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTB1	63948	broad.mit.edu	37	1	53932382	53932382	+	3'UTR	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	20986391	20986391	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21033453	21033453	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13758859	13758859	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38891908	38891908	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC8	22826	broad.mit.edu	37	1	28559567	28559567	+	5'Flank	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM2	1785	broad.mit.edu	37	19	10886572	10886572	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNPEP	23549	broad.mit.edu	37	2	220249104	220249104	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117731274	117731274	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP3	64180	broad.mit.edu	37	16	68012481	68012481	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100502238	100502238	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205156526	205156526	+	Intron	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF2	64641	broad.mit.edu	37	8	25708066	25708066	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE2	9718	broad.mit.edu	37	3	183995649	183995649	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA2R	60401	broad.mit.edu	37	X	65835889	65835889	+	5'Flank	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK2	5610	broad.mit.edu	37	2	37349652	37349652	+	Nonsense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	36927225	36927225	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37252959	37252959	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL7	79993	broad.mit.edu	37	5	60067911	60067911	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP3	5169	broad.mit.edu	37	6	132058512	132058512	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132529882	132529882	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L1	2036	broad.mit.edu	37	20	34809732	34809732	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	216692774	216692774	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72182087	72182087	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133785997	133785997	+	Splice_Site	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66205157	66205157	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH1	2145	broad.mit.edu	37	17	40870094	40870094	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11	2160	broad.mit.edu	37	4	187197457	187197457	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM115A	9747	broad.mit.edu	37	7	143573464	143573464	+	Missense_Mutation	SNP	C	T	T	rs150435300	byFrequency	TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96305469	96305469	+	Intron	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63413106	63413106	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184764303	184764303	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184792915	184792915	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM172A	83989	broad.mit.edu	37	5	93018747	93018747	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3D	131177	broad.mit.edu	37	3	58639297	58639297	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM40B	57464	broad.mit.edu	37	7	129098499	129098499	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37026557	37026557	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM49B	51571	broad.mit.edu	37	8	130874425	130874425	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM70A	55026	broad.mit.edu	37	X	119410885	119410885	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASLG	356	broad.mit.edu	37	1	172635120	172635120	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD3	79072	broad.mit.edu	37	5	7866830	7866830	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126372736	126372736	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLIM1	54751	broad.mit.edu	37	1	16096892	16096892	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL17	64839	broad.mit.edu	37	5	107216724	107216724	+	Intron	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL4	26235	broad.mit.edu	37	6	99374630	99374630	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO2	26232	broad.mit.edu	37	1	11710099	11710100	+	Frame_Shift_Ins	INS	-	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO34	55030	broad.mit.edu	37	14	55817595	55817595	+	Nonsense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1A	2205	broad.mit.edu	37	1	159272686	159272686	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3B	2215	broad.mit.edu	37	1	161594354	161594354	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZ1	9638	broad.mit.edu	37	11	125324086	125324086	+	Silent	SNP	G	T	T	rs139178115		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD4	121512	broad.mit.edu	37	12	32735020	32735020	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	192125690	192125690	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNA	2316	broad.mit.edu	37	X	153590914	153590914	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLOT1	10211	broad.mit.edu	37	6	30709768	30709768	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28644583	28644583	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240371044	240371044	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216290041	216290041	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNTB	2342	broad.mit.edu	37	14	65418232	65418232	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114269998	114269998	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPGT	8790	broad.mit.edu	37	1	74670891	74670891	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRZB	2487	broad.mit.edu	37	2	183731209	183731209	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL1	11167	broad.mit.edu	37	3	120130552	120130552	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP3	8939	broad.mit.edu	37	9	133512319	133512319	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD2	486	broad.mit.edu	37	11	117693433	117693433	+	Splice_Site	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G3BP2	9908	broad.mit.edu	37	4	76582913	76582913	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101258833	101258833	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR3	200959	broad.mit.edu	37	3	97731232	97731232	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31189075	31189075	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT4	8693	broad.mit.edu	37	12	89918307	89918307	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL	51083	broad.mit.edu	37	11	68453150	68453150	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22729490	22729490	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76944186	76944186	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIN1	54826	broad.mit.edu	37	5	102423878	102423878	+	Intron	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA10	84694	broad.mit.edu	37	6	90605636	90605636	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJB1	2705	broad.mit.edu	37	X	70443781	70443781	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK5	256356	broad.mit.edu	37	3	141889376	141889376	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134243609	134243609	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL1	2794	broad.mit.edu	37	6	30520815	30520815	+	Intron	DEL	G	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPAT	8443	broad.mit.edu	37	1	231410987	231410987	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	92797141	92797141	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043958	20043958	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR15	2838	broad.mit.edu	37	3	98251936	98251936	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR97	222487	broad.mit.edu	37	16	57719910	57719910	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89930907	89930907	+	Intron	DEL	T	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	90059092	90059092	+	Intron	SNP	G	T	T	rs72084301		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1A	57655	broad.mit.edu	37	19	35500298	35500298	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1C	54762	broad.mit.edu	37	3	113604334	113604334	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11779007	11779007	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153026393	153026393	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122528962	122528962	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK1	2897	broad.mit.edu	37	21	31045554	31045554	+	Intron	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37271641	37271641	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK6	2870	broad.mit.edu	37	5	176860075	176860075	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146480429	146480429	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146492698	146492698	+	Intron	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2H1	2965	broad.mit.edu	37	11	18382106	18382107	+	Intron	INS	-	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS7	55559	broad.mit.edu	37	X	152721026	152721026	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45261936	45261936	+	3'UTR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240011772	240011772	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDX	139324	broad.mit.edu	37	X	83599510	83599510	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDX	139324	broad.mit.edu	37	X	83730178	83730178	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM	220296	broad.mit.edu	37	11	124792373	124792373	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63922840	63922840	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210536147	210536147	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL2	79802	broad.mit.edu	37	1	222696185	222696185	+	Nonsense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL2	79802	broad.mit.edu	37	1	222712016	222712016	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRPLL	92906	broad.mit.edu	37	2	38796172	38796172	+	Intron	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS2ST1	9653	broad.mit.edu	37	1	87511243	87511243	+	Intron	SNP	C	G	G	rs111509951		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST5	222537	broad.mit.edu	37	6	114384041	114384041	+	5'UTR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3211446	3211446	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUNK	30811	broad.mit.edu	37	21	33331084	33331084	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53578393	53578393	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21166539	21166539	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18731092	18731092	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29938179	29938179	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35876392	35876392	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143045795	143045795	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15243094	15243094	+	Silent	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75950817	75950817	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156668716	156668716	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73849599	73849599	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH6	81033	broad.mit.edu	37	17	61600876	61600876	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19554470	19554470	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155555721	155555721	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215179258	215179258	+	5'UTR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMB3	27094	broad.mit.edu	37	3	178977914	178977914	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10602727	10602727	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27585278	27585278	+	Splice_Site	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118219338	118219338	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94139777	94139777	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51901793	51901793	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55346499	55346499	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55377959	55377959	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL26	55295	broad.mit.edu	37	19	18778916	18778916	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT33A	3883	broad.mit.edu	37	17	39506806	39506806	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52843231	52843231	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-3	85290	broad.mit.edu	37	17	39324029	39324029	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	117907527	117907527	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KY	339855	broad.mit.edu	37	3	134323159	134323159	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAGE3	8270	broad.mit.edu	37	X	153707056	153707056	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7080334	7080334	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129608943	129608943	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129670340	129670340	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107569639	107569640	+	Frame_Shift_Ins	INS	-	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136570190	136570190	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136594342	136594342	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD2	401944	broad.mit.edu	37	1	22141121	22141121	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL1	340596	broad.mit.edu	37	X	111914366	111914366	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX8	431707	broad.mit.edu	37	1	75626493	75626493	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN7A	8825	broad.mit.edu	37	12	81282952	81282952	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100132288	100132288	broad.mit.edu	37	21	9907331	9907331	+	3'UTR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100133308	100133308	broad.mit.edu	37	10	45602096	45602096	+	RNA	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440905	440905	broad.mit.edu	37	2	130792635	130792635	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646813	646813	broad.mit.edu	37	11	50378120	50378120	+	RNA	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121298378	121298378	+	RNA	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR3	23566	broad.mit.edu	37	1	85279510	85279510	+	3'UTR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRMP	4033	broad.mit.edu	37	12	25232031	25232031	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140997062	140997062	+	Frame_Shift_Del	DEL	G	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141272306	141272306	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141607580	141607580	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12340001	12340001	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC31	79782	broad.mit.edu	37	3	169574170	169574170	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33442709	33442709	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	74969272	74969272	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY9	4063	broad.mit.edu	37	1	160771649	160771649	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAB21L2	10586	broad.mit.edu	37	4	151504265	151504265	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151896259	151896259	+	RNA	DEL	T	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB16	139604	broad.mit.edu	37	X	35820780	35820780	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB1	4112	broad.mit.edu	37	X	30269550	30269550	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140966848	140966848	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEE2	139599	broad.mit.edu	37	X	75004593	75004593	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65347059	65347059	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2B2	23324	broad.mit.edu	37	4	6622834	6622834	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3B2	643246	broad.mit.edu	37	12	117013775	117013775	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K15	389840	broad.mit.edu	37	X	19389565	19389565	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPRE1	22919	broad.mit.edu	37	20	31434328	31434328	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCC	4163	broad.mit.edu	37	5	112720711	112720711	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47695089	47695089	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM2	4193	broad.mit.edu	37	12	69229771	69229771	+	Intron	DEL	T	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70345265	70345265	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46806780	46806780	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3B	84206	broad.mit.edu	37	15	82336286	82336286	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD2A	84879	broad.mit.edu	37	1	40432222	40432223	+	Intron	DNP	GG	CT	CT			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR101-1	406893	broad.mit.edu	37	1	65524157	65524157	+	RNA	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR557	693142	broad.mit.edu	37	1	168344846	168344846	+	RNA	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLH3	27030	broad.mit.edu	37	14	75515141	75515141	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55517816	55517816	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC3	23515	broad.mit.edu	37	21	37711173	37711173	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSPD2	158747	broad.mit.edu	37	X	14932587	14932587	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10	4343	broad.mit.edu	37	1	113231997	113231997	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPL	4352	broad.mit.edu	37	1	43818177	43818177	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRE	116534	broad.mit.edu	37	11	3249776	3249776	+	Missense_Mutation	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A12	54860	broad.mit.edu	37	11	60264643	60264643	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6A	64231	broad.mit.edu	37	11	59945598	59945598	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76365199	76365199	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151357950	151357950	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149887229	149887230	+	Intron	INS	-	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9063963	9063963	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9067932	9067932	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9088957	9088957	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42780167	42780167	+	3'UTR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3235859	3235859	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3240143	3240143	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48435217	48435217	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108110731	108110731	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10439865	10439865	+	Silent	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23888306	23888306	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16758368	16758368	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109707460	109707460	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOG	4656	broad.mit.edu	37	1	203054889	203054889	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2090369	2090370	+	Intron	DNP	GG	TT	TT			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69925955	69925955	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1843159	1843159	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL2	254827	broad.mit.edu	37	3	175436124	175436124	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101748033	101748033	+	Splice_Site	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78443851	78443851	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78515872	78515872	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133483297	133483297	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	15974580	15974580	+	Intron	DEL	A	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11185423	11185423	+	Frame_Shift_Del	DEL	C	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72076749	72076749	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELF	26012	broad.mit.edu	37	9	140349771	140349771	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29553702	29553702	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFE2	4778	broad.mit.edu	37	12	54686696	54686696	+	Missense_Mutation	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGDN	25983	broad.mit.edu	37	14	23944436	23944436	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236195640	236195640	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57111855	57111855	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247588869	247588869	+	Frame_Shift_Del	DEL	C	-	-	rs149493236		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOBOX	135935	broad.mit.edu	37	7	144101904	144101904	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH3	4854	broad.mit.edu	37	19	15291560	15291560	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRD1	4898	broad.mit.edu	37	1	52303236	52303236	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50723056	50723056	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176691851	176691851	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN6	221078	broad.mit.edu	37	10	18931430	18931430	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1B	93034	broad.mit.edu	37	2	18766475	18766475	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107867366	107867366	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102344041	102344042	+	Intron	DNP	CA	AT	AT			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101095988	101095988	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123657421	123657421	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132306186	132306186	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921471	247921471	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A2	442361	broad.mit.edu	37	7	143806748	143806748	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248129213	248129213	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247769612	247769612	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248246874	248246874	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248112520	248112520	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248112648	248112648	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248436843	248436843	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T8	343172	broad.mit.edu	37	1	248084593	248084593	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C15	81309	broad.mit.edu	37	11	55322373	55322373	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413650	22413650	+	5'Flank	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22382661	22382661	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661295	4661295	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T1	390155	broad.mit.edu	37	11	56043390	56043390	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861237	55861237	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSR2	116039	broad.mit.edu	37	8	99961384	99961384	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXNAD1	92106	broad.mit.edu	37	3	16312620	16312620	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXTR	5021	broad.mit.edu	37	3	8794926	8794926	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY6	5031	broad.mit.edu	37	11	73008427	73008427	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPLN	89932	broad.mit.edu	37	14	73719804	73719804	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25454869	25454869	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205829880	205829880	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34400396	34400396	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATE2	399967	broad.mit.edu	37	11	125647266	125647266	+	3'UTR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47333749	47333749	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140711144	140711144	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA2	56113	broad.mit.edu	37	5	140720142	140720142	+	Missense_Mutation	SNP	G	T	T	rs116787237	byFrequency;by1000genomes	TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA3	56112	broad.mit.edu	37	5	140724495	140724495	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82546048	82546048	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMTD1	115294	broad.mit.edu	37	8	52773652	52773652	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47769209	47769209	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233122108	233122108	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233393709	233393709	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31876719	31876719	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	32209623	32209623	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144995027	144995027	+	5'Flank	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE9A	5152	broad.mit.edu	37	21	44152096	44152096	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD4	57595	broad.mit.edu	37	X	153068804	153068804	+	3'UTR	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73651681	73651681	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB1	5207	broad.mit.edu	37	X	54982650	54982650	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK1	5230	broad.mit.edu	37	X	77381507	77381507	+	3'UTR	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49754615	49754615	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP1	8993	broad.mit.edu	37	19	46522723	46522723	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151204854	151204854	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP	5304	broad.mit.edu	37	7	142836473	142836473	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110482517	110482517	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51924904	51924904	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G2F	64600	broad.mit.edu	37	1	20474875	20474875	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48558213	48558213	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4F	255189	broad.mit.edu	37	15	42445714	42445714	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171329425	171329425	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK3	1263	broad.mit.edu	37	1	45268721	45268721	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD2	5352	broad.mit.edu	37	3	145789249	145789249	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLP1	5354	broad.mit.edu	37	X	103041586	103041586	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLS3	5358	broad.mit.edu	37	X	114863589	114863589	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129291866	129291866	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118202626	118202626	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA1	5422	broad.mit.edu	37	X	24755689	24755689	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16279254	16279254	+	Silent	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAN-P2RY11	692312	broad.mit.edu	37	19	10225118	10225118	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP2	8495	broad.mit.edu	37	11	7670474	7670474	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIH	10465	broad.mit.edu	37	1	43124216	43124216	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1A	5494	broad.mit.edu	37	14	60749298	60749298	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF12	390999	broad.mit.edu	37	1	12835158	12835158	+	Missense_Mutation	SNP	G	A	A	rs77870074	byFrequency;by1000genomes	TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKACB	5567	broad.mit.edu	37	1	84700881	84700881	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCH	5583	broad.mit.edu	37	14	61917613	61917613	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROK2	60675	broad.mit.edu	37	3	71830726	71830726	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM2	150696	broad.mit.edu	37	2	95941743	95941743	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50025528	50025528	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79325691	79325691	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43373362	43373362	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43519858	43519858	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME2	5721	broad.mit.edu	37	14	24615484	24615484	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40681206	40681206	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRF	5792	broad.mit.edu	37	1	44084920	44084920	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157691298	157691298	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTX4	390667	broad.mit.edu	37	16	1537678	1537678	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB28	9364	broad.mit.edu	37	4	13371599	13371599	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36594888	36594888	+	Missense_Mutation	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP9	10048	broad.mit.edu	37	6	13697164	13697164	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114374839	114374839	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114397650	114397650	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM41	55285	broad.mit.edu	37	X	106362106	106362106	+	5'Flank	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMS3	27303	broad.mit.edu	37	3	29938988	29938989	+	Intron	INS	-	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCE1	9986	broad.mit.edu	37	11	66613459	66613459	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73627305	73627305	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79349080	79349080	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103183337	103183337	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RENBP	5973	broad.mit.edu	37	X	153208946	153208946	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REN	5972	broad.mit.edu	37	1	204128777	204128777	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV1	51455	broad.mit.edu	37	2	100058763	100058763	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183871590	183871590	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGN	9104	broad.mit.edu	37	X	46949272	46949272	+	Silent	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS14	10636	broad.mit.edu	37	5	176795123	176795123	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7BP	401190	broad.mit.edu	37	5	63905141	63905141	+	3'UTR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241094038	241094038	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130926753	130926753	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF20	56254	broad.mit.edu	37	9	104303258	104303258	+	Splice_Site	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117662289	117662289	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KL1	83694	broad.mit.edu	37	14	75388074	75388074	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO1	284654	broad.mit.edu	37	1	38078416	38078416	+	3'UTR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTCD1	8634	broad.mit.edu	37	1	100731827	100731827	+	5'UTR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC3B	154661	broad.mit.edu	37	7	87436668	87436668	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32363408	32363408	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38949803	38949803	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608853	237608853	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237865347	237865347	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A11	6282	broad.mit.edu	37	1	152005432	152005432	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55251380	55251380	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38740129	38740129	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38781172	38781172	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC16B	89866	broad.mit.edu	37	1	177937139	177937139	+	5'UTR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61G	23480	broad.mit.edu	37	7	54825215	54825215	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13866816	13866816	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151108068	151108068	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA11	256394	broad.mit.edu	37	14	94912994	94912994	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE1	5054	broad.mit.edu	37	7	100775014	100775014	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67154804	67154804	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGMS1	259230	broad.mit.edu	37	10	52066844	52066844	+	3'UTR	DEL	C	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3684006	3684006	+	Missense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51628941	51628941	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232539169	232539169	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38600811	38600811	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160709250	160709250	+	Intron	SNP	G	A	A	rs113404744		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC11A1	6556	broad.mit.edu	37	2	219252294	219252294	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A7	10723	broad.mit.edu	37	5	1065276	1065277	+	Intron	INS	-	AGGGGACAGTG	AGGGGACAGTG	rs150605410	by1000genomes	TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22387098	22387098	+	Missense_Mutation	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A6	6511	broad.mit.edu	37	19	15064949	15064949	+	Silent	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A16	85413	broad.mit.edu	37	6	110763799	110763799	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A2	153201	broad.mit.edu	37	5	150696494	150696494	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC37A3	84255	broad.mit.edu	37	7	140035151	140035151	+	3'UTR	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A3	6508	broad.mit.edu	37	2	220496610	220496610	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A3	6508	broad.mit.edu	37	2	220498124	220498124	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85266262	85266262	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A13	157724	broad.mit.edu	37	8	87235360	87235360	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40392219	40392219	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173505044	173505044	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK3	22865	broad.mit.edu	37	3	164907671	164907671	+	Silent	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25325204	25325204	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51571151	51571151	+	Splice_Site	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX17	9784	broad.mit.edu	37	2	27596060	27596060	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101596494	101596494	+	Intron	SNP	C	A	A	rs147673797	by1000genomes	TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA3	124912	broad.mit.edu	37	17	31318959	31318959	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXC	64663	broad.mit.edu	37	X	140357951	140357951	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158604187	158604187	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158612763	158612763	+	Nonsense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158648304	158648304	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131345394	131345394	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54877226	54877226	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP19	6728	broad.mit.edu	37	5	112200078	112200078	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK3	26576	broad.mit.edu	37	X	153047496	153047496	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX	8406	broad.mit.edu	37	X	38031144	38031144	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104063256	104063256	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3	10734	broad.mit.edu	37	7	99779703	99779703	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171533719	171533719	+	Silent	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT5	6861	broad.mit.edu	37	19	55690358	55690358	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7441837	7441837	+	Frame_Shift_Del	DEL	C	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR9	134860	broad.mit.edu	37	6	132859760	132859760	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAT	6898	broad.mit.edu	37	16	71604626	71604626	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D14	57533	broad.mit.edu	37	4	6998019	6998019	+	Intron	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119427378	119427378	+	Nonsense_Mutation	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL1B	9623	broad.mit.edu	37	14	96157078	96157078	+	Missense_Mutation	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRKH	11022	broad.mit.edu	37	1	151747033	151747033	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD3	7005	broad.mit.edu	37	6	35443104	35443104	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR1	25851	broad.mit.edu	37	7	97852397	97852397	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65170927	65170927	+	Silent	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30701125	30701125	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFB1M	51106	broad.mit.edu	37	6	155579289	155579289	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBI	7045	broad.mit.edu	37	5	135388544	135388544	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM3	7053	broad.mit.edu	37	20	2297667	2297667	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44952602	44952603	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32825492	32825492	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM145	284339	broad.mit.edu	37	19	42821933	42821933	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15405878	15405878	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM38B	55151	broad.mit.edu	37	9	108472449	108472449	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM62	80021	broad.mit.edu	37	15	43432452	43432452	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133763935	133763935	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP2	7127	broad.mit.edu	37	14	103599232	103599232	+	Intron	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP3	7128	broad.mit.edu	37	6	138202505	138202505	+	3'UTR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP3	7128	broad.mit.edu	37	6	138202512	138202512	+	3'UTR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11A	8792	broad.mit.edu	37	18	60036389	60036389	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI1	7135	broad.mit.edu	37	1	201382396	201382396	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175086339	175086339	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7579312	7579312	+	Silent	SNP	C	A	A	rs55863639		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP63	8626	broad.mit.edu	37	3	189581917	189581917	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186287493	186287493	+	Intron	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186294836	186294836	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10934106	10934106	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10935034	10935034	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10969057	10969057	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRERF1	55809	broad.mit.edu	37	6	42236542	42236542	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM58	25893	broad.mit.edu	37	1	248039358	248039358	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068134	189068134	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72969995	72969995	+	Silent	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73458090	73458090	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77353536	77353536	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3424415	3424415	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV4	59341	broad.mit.edu	37	12	110236695	110236695	+	Silent	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81534648	81534648	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC37	9652	broad.mit.edu	37	5	94876421	94876421	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47222242	47222242	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179435936	179435936	+	Missense_Mutation	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179588619	179588619	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB8	347688	broad.mit.edu	37	10	93393	93393	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA7	7318	broad.mit.edu	37	3	49848422	49848422	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109921467	109921467	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19481480	19481480	+	Frame_Shift_Del	DEL	T	-	-	rs149131327		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN11	91544	broad.mit.edu	37	1	26624399	26624399	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A6	54578	broad.mit.edu	37	2	234602162	234602162	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69513061	69513061	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70361499	70361499	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43557548	43557548	+	Splice_Site	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17758168	17758168	+	Silent	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96091427	96091427	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215844561	215844561	+	Missense_Mutation	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215939931	215939931	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216373371	216373371	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216500926	216500926	+	Intron	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216538206	216538206	+	Intron	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USO1	8615	broad.mit.edu	37	4	76726398	76726398	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19024658	19024658	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	21683297	21683297	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42597043	42597043	+	IGR	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	102562399	102562399	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107047098	107047098	+	IGR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49120298	49120298	+	IGR	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49390398	49390398	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51527357	51527357	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56114486	56114486	+	IGR	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	63397821	63397821	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111609466	111609466	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	49345499	49345499	+	IGR	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59102927	59102927	+	IGR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	103749608	103749608	+	IGR	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19500241	19500241	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20097336	20097336	+	IGR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137328	20137328	+	IGR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	24219627	24219627	+	IGR	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	51903344	51903344	+	IGR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57508231	57508231	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82383954	82383954	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	83159518	83159518	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23500252	23500252	+	IGR	DEL	T	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	52387898	52387898	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32177128	32177128	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32186879	32186879	+	IGR	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33490900	33490900	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	61089625	61089625	+	IGR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	14673474	14673474	+	IGR	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16744309	16744309	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	19091383	19091383	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20628082	20628082	+	IGR	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	53243607	53243607	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	116108061	116108061	+	IGR	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152050495	152050495	+	IGR	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	210440118	210440118	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	236274824	236274824	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247451950	247451950	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604971	248604971	+	IGR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	47310154	47310154	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10368369	10368369	+	IGR	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	21095677	21095677	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	25142591	25142591	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	41859523	41859523	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10862678	10862678	+	IGR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14916940	14916940	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16348221	16348221	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106869801	106869802	+	IGR	DNP	CC	AA	AA			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127315162	127315162	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384226	132384226	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	109634915	109634915	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	15176048	15176049	+	IGR	INS	-	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	17919287	17919287	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	27675080	27675080	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	40803032	40803032	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96069611	96069611	+	IGR	DEL	A	-	-			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	112998928	112998928	+	IGR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130057741	130057741	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137277025	137277025	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	33013153	33013153	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64216381	64216382	+	IGR	DNP	GG	TT	TT			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65298620	65298620	+	IGR	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15451739	15451739	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	162843681	162843681	+	IGR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	21121279	21121279	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	60040443	60040443	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	24002388	24002388	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27236737	27236737	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27529377	27529377	+	IGR	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30437561	30437561	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	31488101	31488101	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48117442	48117442	+	IGR	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10491331	10491331	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	20629608	20629608	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48942557	48942557	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55781026	55781026	+	IGR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665865	56665865	+	IGR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57005061	57005061	+	IGR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57072102	57072102	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62708710	62708710	+	IGR	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62910156	62910156	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020690	63020690	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63475820	63475820	+	IGR	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	85010498	85010498	+	IGR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	29885505	29885505	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653320	50653320	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	90425170	90425170	+	IGR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	21420641	21420641	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44090365	44090365	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	65635672	65635672	+	IGR	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90432175	90432175	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	106843486	106843486	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	110864552	110864552	+	IGR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	115238630	115238630	+	IGR	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	12844011	12844011	+	IGR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	131063599	131063599	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144712262	144712262	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147134114	147134114	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147134116	147134116	+	IGR	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25212969	25212969	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	45842874	45842874	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47662887	47662887	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55199181	55199181	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	67012467	67012467	+	IGR	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	86959044	86959044	+	IGR	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89294781	89294781	+	IGR	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97644813	97644813	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99405858	99405858	+	IGR	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS	7407	broad.mit.edu	37	6	31749539	31749539	+	Splice_Site	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6836607	6836607	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFC	7424	broad.mit.edu	37	4	177632762	177632762	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R5	317705	broad.mit.edu	37	1	247420349	247420349	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100821844	100821844	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122720130	122720130	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2L	402117	broad.mit.edu	37	2	215279259	215279259	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177094609	177094609	+	Intron	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR91	29062	broad.mit.edu	37	7	134873253	134873253	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK3	65267	broad.mit.edu	37	X	54224971	54224972	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108634006	108634006	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WT1	7490	broad.mit.edu	37	11	32437898	32437898	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WT1	7490	broad.mit.edu	37	11	32437934	32437934	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XAGE5	170627	broad.mit.edu	37	X	52842245	52842245	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31572747	31572747	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XG	7499	broad.mit.edu	37	X	2688630	2688630	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	167992309	167992309	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168108351	168108351	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPA	7507	broad.mit.edu	37	9	100459595	100459595	+	Translation_Start_Site	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC5	7520	broad.mit.edu	37	2	216981433	216981433	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAK	51776	broad.mit.edu	37	2	174131278	174131278	+	Missense_Mutation	SNP	A	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAP70	7535	broad.mit.edu	37	2	98341688	98341688	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167016239	167016239	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC15	158866	broad.mit.edu	37	X	74649739	74649739	+	Intron	SNP	A	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC19	131540	broad.mit.edu	37	3	195937655	195937655	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77776697	77776697	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP91	80829	broad.mit.edu	37	11	58385171	58385171	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35863113	35863113	+	Nonsense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF117	51351	broad.mit.edu	37	7	64438693	64438693	+	Missense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58572931	58572931	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6964544	6964544	+	Intron	SNP	C	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6964546	6964546	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF285	26974	broad.mit.edu	37	19	44891284	44891284	+	Nonsense_Mutation	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21706480	21706480	+	Silent	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49669627	49669627	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF429	353088	broad.mit.edu	37	19	21720876	21720876	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF572	137209	broad.mit.edu	37	8	125989475	125989475	+	Missense_Mutation	SNP	A	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	53340	53340	+	5'UTR	SNP	G	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF630	57232	broad.mit.edu	37	X	47919783	47919783	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF71	58491	broad.mit.edu	37	19	57133832	57133832	+	Missense_Mutation	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57767000	57767000	+	Missense_Mutation	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPBP	11055	broad.mit.edu	37	7	50129290	50129290	+	Missense_Mutation	SNP	C	A	A	rs148222395		TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN4	201516	broad.mit.edu	37	19	58189585	58189585	+	Missense_Mutation	SNP	T	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZXDA	7789	broad.mit.edu	37	X	57936549	57936549	+	Silent	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22363184	22363184	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	38273933	38273933	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17385653	17385653	+	5'Flank	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186697728	186697728	+	Intron	SNP	C	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89999644	89999644	+	Intron	SNP	G	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90160633	90160633	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	106601112	106601112	+	3'UTR	SNP	T	G	G			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	1514939	1514939	+	Intron	SNP	G	A	A			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142139675	142139675	+	Intron	SNP	T	C	C			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142148831	142148832	+	Intron	INS	-	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78938215	78938215	+	Intron	SNP	C	T	T			TCGA-49-4488-01A-01D-1753-08	TCGA-49-4488-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
