Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ARAP2	0	genome.wustl.edu	37	4	36212227	36212227	+	Missense_Mutation	SNP	A	A	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	4	36212227	36212227	A	T	SNP	ARAP2	ENST00000303965	human	ensembl	69_37n	-1	known	missense	c.1272	p.S424R	1.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_ArfGAP,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	373	0	0.00	471	99	17.34	-	-	-
ATP6V0A4	0	genome.wustl.edu	37	7	138394499	138394499	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	7	138394499	138394499	G	C	SNP	ATP6V0A4	ENST00000310018	human	ensembl	69_37n	-1	known	missense	c.2299	p.L767V	1.000	pfam_ATPase_V0/A0_a	pfam_ATPase_V0/A0_a	-	no_errors	ATP6V0A4	HGNC	ENSG00000105929	245	0	0.00	345	87	20.09	-	-	-
ATXN3L	0	genome.wustl.edu	37	X	13337012	13337012	+	Missense_Mutation	SNP	T	T	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	X	13337012	13337012	T	A	SNP	ATXN3L	ENST00000380622	human	ensembl	69_37n	-1	known	missense	c.1042	p.N348Y	0.006	NULL	pfam_Josephin,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Josephin,pfscan_Ubiquitin-int_motif,prints_Josephin	-	no_errors	ATXN3L	HGNC	ENSG00000123594	366	0	0.00	425	98	18.74	-	-	-
B3GAT2	0	genome.wustl.edu	37	6	71603840	71603840	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	6	71603840	71603840	C	T	SNP	B3GAT2	ENST00000230053	human	ensembl	69_37n	-1	known	missense	c.727	p.D243N	1.000	pfam_Glyco_trans_43	pfam_Glyco_trans_43	-	no_errors	B3GAT2	HGNC	ENSG00000112309	142	0	0.00	123	28	18.54	-	-	-
BCL7C	0	genome.wustl.edu	37	16	30899222	30899223	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	16	30899222	30899223	-	G	INS	BCL7C	ENST00000215115	human	ensembl	69_37n	-1	known	frame_shift_ins	c.618_617	p.L207fs	1.000:1.000	NULL	pfam_BCL7	-	no_errors	BCL7C	HGNC	ENSG00000099385	28	0	0.00	43	7	14.00	-	-	-
CFH	0	genome.wustl.edu	37	1	196684769	196684769	+	Missense_Mutation	SNP	C	C	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	1	196684769	196684769	C	A	SNP	CFH	ENST00000367429	human	ensembl	69_37n	+1	known	missense	c.1566	p.D522E	0.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFH	HGNC	ENSG00000000971	193	0	0.00	314	64	16.89	-	-	-
CRHR1	0	genome.wustl.edu	37	17	43911164	43911165	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	17	43911164	43911165	-	T	INS	CRHR1	ENST00000398285	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1101_1102	p.V367fs	1.000:1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF1_rcpt,prints_GPCR_2_diuretic_rcpt	-	no_errors	CRHR1	HGNC	ENSG00000120088	29	0	0.00	13	27	67.50	-	-	-
CRHR1	0	genome.wustl.edu	37	17	43911167	43911168	+	Frame_Shift_Ins	INS	-	-	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	17	43911167	43911168	-	A	INS	CRHR1	ENST00000398285	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1104_1105	p.S368fs	1.000:1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_CRF_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CRF1_rcpt,prints_GPCR_2_diuretic_rcpt	-	no_errors	CRHR1	HGNC	ENSG00000120088	31	0	0.00	15	27	64.29	-	-	-
CXADR	0	genome.wustl.edu	37	21	18931412	18931412	+	Silent	SNP	G	G	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	21	18931412	18931412	G	A	SNP	CXADR	ENST00000284878	human	ensembl	69_37n	+1	known	silent	c.534	p.L178	0.762	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	CXADR	HGNC	ENSG00000154639	279	0	0.00	272	61	18.32	-	-	-
CXorf58	0	genome.wustl.edu	37	X	23934438	23934438	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	X	23934438	23934438	C	A	SNP	CXorf58	ENST00000379211	human	ensembl	69_37n	+1	known	nonsense	c.416	p.S139*	0.803	NULL	NULL	-	no_errors	CXorf58	HGNC	ENSG00000165182	71	0	0.00	76	26	25.49	-	-	-
DDX28	0	genome.wustl.edu	37	16	68055678	68055679	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	16	68055678	68055679	-	G	INS	DDX28	ENST00000332395	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1428_1427	p.T477fs	0.173:0.181	pfam_Helicase_C,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX28	HGNC	ENSG00000182810	62	0	0.00	23	5	17.86	-	-	-
DNTT	0	genome.wustl.edu	37	10	98064304	98064304	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	10	98064304	98064304	G	A	SNP	DNTT	ENST00000371174	human	ensembl	69_37n	+1	known	missense	c.50	p.R17Q	0.144	pirsf_DNA_nucleotidylexotransferase	pfam_DNA_pol_lambd_fingers_domain,pfam_BRCT_dom,pfam_Nucleotidyltransferase,superfamily_DNA-dir_DNA_pol_X_beta-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_DNA-dir_DNA_pol_X,pirsf_DNA_nucleotidylexotransferase,pfscan_BRCT_dom,prints_DNA_nucleotidylexotransferase,prints_DNA_pol_X,prints_DNA_pol_X_beta-like	-	no_errors	DNTT	HGNC	ENSG00000107447	93	0	0.00	91	29	24.17	-	-	-
DPY19L2P2	0	genome.wustl.edu	37	7	102875162	102875162	+	RNA	SNP	T	T	C			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	7	102875162	102875162	T	C	SNP	DPY19L2P2	ENST00000312132	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DPY19L2P2	HGNC	ENSG00000170629	19	0	0.00	22	6	21.43	-	-	-
EIF3B	0	genome.wustl.edu	37	7	2409146	2409146	+	Silent	SNP	C	C	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	7	2409146	2409146	C	T	SNP	EIF3B	ENST00000360876	human	ensembl	69_37n	+1	known	silent	c.1443	p.F481	0.993	pirsf_eIF3b	pfam_TIF2A_beta_prop-like,pfam_RRM_dom,smart_RRM_dom,pirsf_eIF3b,pfscan_RRM_dom	-	no_errors	EIF3B	HGNC	ENSG00000106263	165	0	0.00	354	137	27.79	-	-	-
EXOC3	0	genome.wustl.edu	37	5	457086	457087	+	In_Frame_Ins	INS	-	-	AGG			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	5	457086	457087	-	AGG	INS	EXOC3	ENST00000315013	human	ensembl	69_37n	+1	known	in_frame_ins	c.1129_1130	p.SELL377in_frame_ins*	1.000:1.000	pfam_Sec6	pfam_Sec6	-	no_errors	EXOC3	HGNC	ENSG00000180104	14	0	0.00	19	12	38.71	-	-	-
FAM47C	0	genome.wustl.edu	37	X	37027582	37027582	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	X	37027582	37027582	C	T	SNP	FAM47C	ENST00000358047	human	ensembl	69_37n	+1	known	missense	c.1099	p.R367C	0.002	NULL	NULL	-	no_errors	FAM47C	HGNC	ENSG00000198173	237	0	0.00	233	60	20.48	-	-	-
FGF7	0	genome.wustl.edu	37	15	49716681	49716681	+	Missense_Mutation	SNP	G	G	C			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	15	49716681	49716681	G	C	SNP	FGF7	ENST00000267843	human	ensembl	69_37n	+1	known	missense	c.187	p.D63H	1.000	superfamily_Cytokine_IL1-like,smart_IL1_HBGF	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_GF_heparin-bd,prints_IL1_HBGF	-	no_errors	FGF7	HGNC	ENSG00000140285	272	0	0.00	293	74	20.16	-	-	-
GALNT6	0	genome.wustl.edu	37	12	51758021	51758021	+	Silent	SNP	G	G	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	12	51758021	51758021	G	A	SNP	GALNT6	ENST00000356317	human	ensembl	69_37n	-1	known	silent	c.933	p.P311	0.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT6	HGNC	ENSG00000139629	102	0	0.00	49	33	40.24	-	-	-
GANC	0	genome.wustl.edu	37	15	42602936	42602936	+	Missense_Mutation	SNP	A	A	G			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	15	42602936	42602936	A	G	SNP	GANC	ENST00000318010	human	ensembl	69_37n	+1	known	missense	c.949	p.R317G	0.073	superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd	-	no_errors	GANC	HGNC	ENSG00000214013	321	1	0.31	352	81	18.71	-	-	-
KBTBD4	0	genome.wustl.edu	37	11	47599398	47599398	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	11	47599398	47599398	C	T	SNP	KBTBD4	ENST00000430070	human	ensembl	69_37n	-1	known	missense	c.202	p.E68K	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	KBTBD4	HGNC	ENSG00000123444	43	0	0.00	41	301	75.44	-	-	-
KLF4	0	genome.wustl.edu	37	9	110249348	110249348	+	Missense_Mutation	SNP	T	T	G			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	9	110249348	110249348	T	G	SNP	KLF4	ENST00000374672	human	ensembl	69_37n	-1	known	missense	c.1225	p.K409Q	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF4	HGNC	ENSG00000136826	70	0	0.00	11	6	35.29	-	-	-
LYVE1	0	genome.wustl.edu	37	11	10590003	10590003	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	11	10590003	10590003	C	T	SNP	LYVE1	ENST00000256178	human	ensembl	69_37n	-1	known	missense	c.77	p.R26H	0.000	NULL	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link,prints_Link	-	no_errors	LYVE1	HGNC	ENSG00000133800	83	0	0.00	77	19	19.79	-	-	-
MADD	0	genome.wustl.edu	37	11	47304060	47304060	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	11	47304060	47304060	C	T	SNP	MADD	ENST00000311027	human	ensembl	69_37n	+1	known	missense	c.1598	p.P533L	1.000	pfam_dDENN_dom,smart_dDENN_dom,pfscan_dDENN_dom	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514	97	0	0.00	187	39	17.26	-	-	-
MAU2	0	genome.wustl.edu	37	19	19454747	19454748	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	19	19454747	19454748	-	CC	INS	MAU2	ENST00000262815	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1075_1076	p.E359fs	1.000:1.000	pfam_Cohesin_loading_factor	pfam_Cohesin_loading_factor,smart_TPR_repeat	-	no_errors	MAU2	HGNC	ENSG00000129933	19	0	0.00	10	3	23.08	-	-	-
MICALL1	0	genome.wustl.edu	37	22	38327919	38327919	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	22	38327919	38327919	C	-	DEL	MICALL1	ENST00000215957	human	ensembl	69_37n	+1	known	frame_shift_del	c.1995	p.P667fs	1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL1	HGNC	ENSG00000100139	37	0	0.00	24	66	68.04	-	-	-
MICALL1	0	genome.wustl.edu	37	22	38327923	38327924	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	22	38327923	38327924	CC	-	DEL	MICALL1	ENST00000215957	human	ensembl	69_37n	+1	known	frame_shift_del	c.1999_2000	p.P667fs	1.000:1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL1	HGNC	ENSG00000100139	34	0	0.00	23	66	74.16	-	-	-
MRPL43	0	genome.wustl.edu	37	10	102746498	102746499	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	10	102746498	102746499	-	C	INS	MRPL43	ENST00000318364	human	ensembl	69_37n	-1	known	frame_shift_ins	c.473_472	p.A158fs	0.000:0.000	NULL	pfam_Ribosome/NADH_DH,superfamily_Thioredoxin-like_fold,smart_Ribosome/NADH_DH	-	no_errors	MRPL43	HGNC	ENSG00000055950	21	0	0.00	5	3	37.50	-	-	-
MYO5B	0	genome.wustl.edu	37	18	47431047	47431047	+	Missense_Mutation	SNP	G	G	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	18	47431047	47431047	G	A	SNP	MYO5B	ENST00000285039	human	ensembl	69_37n	-1	known	missense	c.2566	p.R856C	1.000	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306	34	0	0.00	27	9	25.00	-	-	-
OR13A1	0	genome.wustl.edu	37	10	45799219	45799219	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	10	45799219	45799219	C	-	DEL	OR13A1	ENST00000374401	human	ensembl	69_37n	-1	known	frame_shift_del	c.652	p.V218fs	0.005	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR13A1	HGNC	ENSG00000256574	133	0	0.00	100	94	47.96	-	-	-
OR52M1	0	genome.wustl.edu	37	11	4567110	4567110	+	Silent	SNP	G	G	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	11	4567110	4567110	G	T	SNP	OR52M1	ENST00000360213	human	ensembl	69_37n	+1	known	silent	c.690	p.G230	0.005	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR52M1	HGNC	ENSG00000197790	516	2	0.39	531	97	15.45	-	-	-
PAPOLB	0	genome.wustl.edu	37	7	4900572	4900572	+	Silent	SNP	C	C	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	7	4900572	4900572	C	T	SNP	PAPOLB	ENST00000404991	human	ensembl	69_37n	-1	known	silent	c.867	p.E289	1.000	pfam_PolA_pol_cen_dom,pirsf_PolyA_polymerase	pfam_PolA_pol_cen_dom,pfam_PolA_pol_RNA-bd_dom,pfam_Nucleotidyltransferase,superfamily_NuclTrfase_I_C,pirsf_PolyA_polymerase	-	no_errors	PAPOLB	HGNC	ENSG00000218823	315	0	0.00	108	23	17.56	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	185	1	0.54	310	82	20.87	-	-	-
SEMA3B	0	genome.wustl.edu	37	3	50311832	50311832	+	RNA	DEL	G	G	-			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	3	50311832	50311832	G	-	DEL	SEMA3B	ENST00000316347	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SEMA3B	HGNC	ENSG00000012171	69	0	0.00	13	2	13.33	-	-	-
WNK1	0	genome.wustl.edu	37	12	970284	970284	+	Missense_Mutation	SNP	C	C	T			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	12	970284	970284	C	T	SNP	WNK1	ENST00000530271	human	ensembl	69_37n	+1	known	missense	c.1726	p.R576W	0.957	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	WNK1	HGNC	ENSG00000060237	402	1	0.24	430	96	18.01	-	-	-
ZCCHC16	0	genome.wustl.edu	37	X	111698592	111698592	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A7-A0CG-01A-11W-A019-09	TCGA-A7-A0CG-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	351275c7-70ca-4ddc-be76-a6ff4dc7655e	b7b01df0-5282-4fbd-89f4-d52e050d047a	X	111698592	111698592	C	A	SNP	ZCCHC16	ENST00000340433	human	ensembl	69_37n	+1	known	nonsense	c.636	p.C212*	0.999	NULL	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC16	HGNC	ENSG00000187823	873	0	0.00	808	189	18.96	-	-	-
