Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
CBLN4	0	genome.wustl.edu	37	20	54579007	54579007	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	20	54579007	54579007	G	A	SNP	CBLN4	ENST00000064571	human	ensembl	69_37n	-1	known	missense	c.221	p.S74L	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN4	HGNC	ENSG00000054803	51	0	0.00	21	17	43.59	-	-	-
CCT6B	0	genome.wustl.edu	37	17	33269814	33269814	+	Splice_Site	SNP	C	C	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	17	33269814	33269814	C	T	SNP	CCT6B	ENST00000314144	human	ensembl	69_37n	-1	known	splice_site	c.725+1	e6+1	1.000	-	-	-	no_errors	CCT6B	HGNC	ENSG00000132141	78	0	0.00	58	57	49.57	-	-	-
CLPX	0	genome.wustl.edu	37	15	65450966	65450966	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	15	65450966	65450966	T	A	SNP	CLPX	ENST00000300107	human	ensembl	69_37n	-1	known	missense	c.839	p.D280V	1.000	tigrfam_Clp_protease_ATP-bd_su_ClpX	pfam_ATPase_AAA-2,pfam_Clp_ATPase_C,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_Sigma_54_int,smart_AAA+_ATPase,tigrfam_Clp_protease_ATP-bd_su_ClpX	-	no_errors	CLPX	HGNC	ENSG00000166855	97	0	0.00	24	79	76.70	-	-	-
CYTH3	0	genome.wustl.edu	37	7	6210236	6210236	+	Silent	SNP	C	C	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	7	6210236	6210236	C	T	SNP	CYTH3	ENST00000350796	human	ensembl	69_37n	-1	known	silent	c.753	p.P251	0.339	superfamily_Sec7	pfam_Sec7,pfam_Pleckstrin_homology,superfamily_Sec7,smart_Sec7,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7	-	no_errors	CYTH3	HGNC	ENSG00000008256	15	0	0.00	4	6	60.00	-	-	-
DKK4	0	genome.wustl.edu	37	8	42234500	42234500	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	8	42234500	42234500	C	A	SNP	DKK4	ENST00000220812	human	ensembl	69_37n	-1	known	missense	c.64	p.D22Y	1.000	NULL	pfam_Dickkopf_N,pfam_Prokineticin_domain	-	no_errors	DKK4	HGNC	ENSG00000104371	27	0	0.00	34	20	36.36	-	-	-
DMD	0	genome.wustl.edu	37	X	32867884	32867884	+	Silent	SNP	G	G	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	X	32867884	32867884	G	T	SNP	DMD	ENST00000357033	human	ensembl	69_37n	-1	known	silent	c.147	p.R49	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pirsf_Dystrophin/utrophin,pfscan_CH-domain	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	164	0	0.00	199	118	37.22	-	-	-
EXOC6	0	genome.wustl.edu	37	10	94653227	94653227	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	10	94653227	94653227	G	C	SNP	EXOC6	ENST00000371547	human	ensembl	69_37n	+1	known	missense	c.271	p.D91H	1.000	pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6	HGNC	ENSG00000138190	361	0	0.00	333	219	39.60	-	-	-
FAM75D5	0	genome.wustl.edu	37	9	84533988	84533988	+	RNA	SNP	C	C	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	9	84533988	84533988	C	T	SNP	FAM75D5	ENST00000527857	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM75D5	HGNC	ENSG00000240632	21	0	0.00	3	2	40.00	-	-	-
GAB3	0	genome.wustl.edu	37	X	153928295	153928295	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	X	153928295	153928295	C	T	SNP	GAB3	ENST00000424127	human	ensembl	69_37n	-1	known	missense	c.1109	p.R370Q	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB3	HGNC	ENSG00000160219	176	0	0.00	149	116	43.77	-	-	-
GABRA1	0	genome.wustl.edu	37	5	161309644	161309644	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	5	161309644	161309644	C	A	SNP	GABRA1	ENST00000023897	human	ensembl	69_37n	+1	known	missense	c.640	p.R214S	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	69	0	0.00	51	36	41.38	-	-	-
GALNT13	0	genome.wustl.edu	37	2	155157929	155157929	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	2	155157929	155157929	A	G	SNP	GALNT13	ENST00000409237	human	ensembl	69_37n	+1	known	missense	c.983	p.Q328R	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT13	HGNC	ENSG00000144278	180	0	0.00	124	19	13.29	-	-	-
GATA3	0	genome.wustl.edu	37	10	8115710	8115711	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	10	8115710	8115711	-	C	INS	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1059_1060	p.L354fs	1.000:1.000	smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	109	0	0.00	66	59	47.20	-	-	-
GOLGA5	0	genome.wustl.edu	37	14	93273140	93273140	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	14	93273140	93273140	G	T	SNP	GOLGA5	ENST00000163416	human	ensembl	69_37n	+1	known	missense	c.604	p.V202L	0.000	NULL	pfam_Golgin_subfamily_A_member_5,superfamily_Prefoldin	-	no_errors	GOLGA5	HGNC	ENSG00000066455	68	0	0.00	66	62	48.44	-	-	-
HIST1H4J	0	genome.wustl.edu	37	6	27792030	27792030	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	6	27792030	27792030	G	T	SNP	HIST1H4J	ENST00000355057	human	ensembl	69_37n	+1	known	missense	c.128	p.G43V	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4J	HGNC	ENSG00000197238	29	0	0.00	3	9	75.00	-	-	-
KDM6A	0	genome.wustl.edu	37	X	44911035	44911035	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	X	44911035	44911035	T	-	DEL	KDM6A	ENST00000382899	human	ensembl	69_37n	+1	known	frame_shift_del	c.736	p.L246fs	1.000	pfscan_TPR-contain_dom	pfam_JmjC_dom,pfam_TPR-1,smart_TPR_repeat,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KDM6A	HGNC	ENSG00000147050	32	0	0.00	31	14	30.43	-	-	-
KIF3B	0	genome.wustl.edu	37	20	30898744	30898744	+	Silent	SNP	C	C	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	20	30898744	30898744	C	T	SNP	KIF3B	ENST00000375712	human	ensembl	69_37n	+1	known	silent	c.1164	p.G388	1.000	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3B	HGNC	ENSG00000101350	115	0	0.00	126	77	37.75	-	-	-
MALAT1	0	genome.wustl.edu	37	11	65273697	65273697	+	RNA	DEL	C	C	-			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	11	65273697	65273697	C	-	DEL	MALAT1	ENST00000534336	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	52	0	0.00	65	36	33.96	-	-	-
MTOR	0	genome.wustl.edu	37	1	11169377	11169377	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	1	11169377	11169377	T	A	SNP	MTOR	ENST00000361445	human	ensembl	69_37n	-1	known	missense	c.7498	p.I2500F	1.000	pfscan_PI3/4_kinase_cat_dom	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_FKBP_rapamycin-assoc_FKBP12-bd,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_FKBP_rapamycin-assoc_FKBP12-bd,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793	101	0	0.00	17	57	77.03	-	-	-
NBPF14	0	genome.wustl.edu	37	1	148009371	148009371	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	1	148009371	148009371	G	A	SNP	NBPF14	ENST00000369219	human	ensembl	69_37n	-1	known	missense	c.1936	p.R646C	0.000	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF14	HGNC	ENSG00000122497	401	3	0.74	49	9	15.52	-	-	-
NDUFAF5	0	genome.wustl.edu	37	20	13769239	13769239	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	20	13769239	13769239	T	G	SNP	NDUFAF5	ENST00000378106	human	ensembl	69_37n	+1	known	missense	c.268	p.F90V	1.000	pfam_Put_SAM_MeTrfase	pfam_Methyltransf_11,pfam_Methyltransf_12,pfam_UbiE/COQ5_MeTrFase,pfam_Put_SAM_MeTrfase	-	no_errors	NDUFAF5	HGNC	ENSG00000101247	71	0	0.00	78	44	36.07	-	-	-
NEK11	0	genome.wustl.edu	37	3	131068491	131068491	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	3	131068491	131068491	G	A	SNP	NEK11	ENST00000510688	human	ensembl	69_37n	+1	novel	missense	c.1712	p.R571K	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK11	HGNC	ENSG00000114670	179	0	0.00	123	103	45.58	-	-	-
OR11H6	0	genome.wustl.edu	37	14	20692496	20692496	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	14	20692496	20692496	G	T	SNP	OR11H6	ENST00000315519	human	ensembl	69_37n	+1	known	missense	c.628	p.A210S	0.201	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR11H6	HGNC	ENSG00000176219	103	0	0.00	56	55	49.11	-	-	-
PPFIBP2	0	genome.wustl.edu	37	11	7672916	7672916	+	Silent	SNP	C	C	G			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	11	7672916	7672916	C	G	SNP	PPFIBP2	ENST00000299492	human	ensembl	69_37n	+1	known	silent	c.2277	p.T759	0.664	pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	pfam_SAM_2,pfam_SAM_type1,pfam_Integrase_Tn916-type_DNA-bd_N,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIBP2	HGNC	ENSG00000166387	127	0	0.00	79	26	24.76	-	-	-
PRPF39	0	genome.wustl.edu	37	14	45579794	45579794	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	14	45579794	45579794	A	C	SNP	PRPF39	ENST00000355765	human	ensembl	69_37n	+1	known	missense	c.1346	p.E449A	0.999	NULL	smart_HAT	-	no_errors	PRPF39	HGNC	ENSG00000185246	14	0	0.00	14	9	39.13	-	-	-
PTHLH	0	genome.wustl.edu	37	12	28114898	28114898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	12	28114898	28114898	T	-	DEL	PTHLH	ENST00000354417	human	ensembl	69_37n	-1	known	frame_shift_del	c.557	p.K186fs	0.135	NULL	pfam_PTH/PTH-rel,smart_PTH/PTH-rel	-	no_errors	PTHLH	HGNC	ENSG00000087494	28	0	0.00	22	6	20.00	-	-	-
RGPD2	0	genome.wustl.edu	37	2	88083849	88083849	+	Silent	SNP	T	T	C			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	2	88083849	88083849	T	C	SNP	RGPD2	ENST00000398146	human	ensembl	69_37n	-1	known	silent	c.2694	p.E898	0.992	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_2,pfam_TPR-1,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD2	HGNC	ENSG00000185304	12	0	0.00	8	6	40.00	-	-	-
SAMD9	0	genome.wustl.edu	37	7	92733834	92733834	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	7	92733834	92733834	G	A	SNP	SAMD9	ENST00000379958	human	ensembl	69_37n	-1	known	missense	c.1577	p.S526L	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	244	0	0.00	214	151	41.26	-	-	-
SCYL2	0	genome.wustl.edu	37	12	100676854	100676854	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	12	100676854	100676854	C	T	SNP	SCYL2	ENST00000360820	human	ensembl	69_37n	+1	known	nonsense	c.106	p.R36*	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	SCYL2	HGNC	ENSG00000136021	96	0	0.00	79	47	37.30	-	-	-
SZT2	0	genome.wustl.edu	37	1	43908290	43908290	+	Splice_Site	SNP	G	G	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	1	43908290	43908290	G	A	SNP	SZT2	ENST00000562955	human	ensembl	69_37n	+1	known	splice_site	c.7980+1	e57+1	1.000	-	-	-	no_errors	SZT2	HGNC	ENSG00000198198	207	0	0.00	24	59	71.08	-	-	-
TC2N	0	genome.wustl.edu	37	14	92265374	92265374	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	14	92265374	92265374	G	C	SNP	TC2N	ENST00000340892	human	ensembl	69_37n	-1	known	missense	c.596	p.S199C	0.983	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	TC2N	HGNC	ENSG00000165929	128	0	0.00	97	76	43.93	-	-	-
TC2N	0	genome.wustl.edu	37	14	92265375	92265375	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	14	92265375	92265375	A	T	SNP	TC2N	ENST00000340892	human	ensembl	69_37n	-1	known	missense	c.595	p.S199T	0.952	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	TC2N	HGNC	ENSG00000165929	124	0	0.00	96	75	43.86	-	-	-
TXNDC11	0	genome.wustl.edu	37	16	11792021	11792021	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	16	11792021	11792021	G	T	SNP	TXNDC11	ENST00000356957	human	ensembl	69_37n	-1	known	missense	c.1148	p.P383H	1.000	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC	ENSG00000153066	78	0	0.00	83	48	36.64	-	-	-
USP31	0	genome.wustl.edu	37	16	23085124	23085124	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	16	23085124	23085124	C	A	SNP	USP31	ENST00000219689	human	ensembl	69_37n	-1	known	missense	c.2254	p.V752F	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP31	HGNC	ENSG00000103404	37	0	0.00	46	9	16.36	-	-	-
WDR6	0	genome.wustl.edu	37	3	49051381	49051382	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A06Y-01A-21W-A019-09	TCGA-A8-A06Y-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3bede568-d8b6-44c0-99e0-a9b6c7d4ce80	268a4247-2839-412a-a531-475663b3a6ac	3	49051381	49051382	-	G	INS	WDR6	ENST00000395474	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2504_2505	p.R838fs	1.000:0.007	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR6	HGNC	ENSG00000178252	33	0	0.00	16	3	15.79	-	-	-
