Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADORA1	0	genome.wustl.edu	37	1	203098133	203098133	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	203098133	203098133	A	T	SNP	ADORA1	ENST00000309502	human	ensembl	69_37n	+1	known	missense	c.164	p.D55V	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Adenosn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Adeno_A1_rcpt	-	no_errors	ADORA1	HGNC	ENSG00000163485	65	0	0.00	170	20	10.26	-	-	-
AHNAK	0	genome.wustl.edu	37	11	62284301	62284301	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	11	62284301	62284301	G	A	SNP	AHNAK	ENST00000378024	human	ensembl	69_37n	-1	known	missense	c.17588	p.S5863F	0.999	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	384	0	0.00	153	86	35.98	-	-	-
ALDH1B1	0	genome.wustl.edu	37	9	38395914	38395914	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	9	38395914	38395914	G	T	SNP	ALDH1B1	ENST00000377698	human	ensembl	69_37n	+1	known	missense	c.169	p.V57F	0.567	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1B1	HGNC	ENSG00000137124	85	0	0.00	42	15	26.32	-	-	-
AOAH	0	genome.wustl.edu	37	7	36661342	36661342	+	Silent	SNP	G	G	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	7	36661342	36661342	G	A	SNP	AOAH	ENST00000258749	human	ensembl	69_37n	-1	known	silent	c.627	p.S209	0.000	NULL	pfam_Lipase_GDSL,pfam_SapB_2,superfamily_Saposin-like,superfamily_Esterase_SGNH_hydro-type,smart_SaposinB,pfscan_SaposinB	-	no_errors	AOAH	HGNC	ENSG00000136250	206	0	0.00	83	47	36.15	-	-	-
ARHGAP12	0	genome.wustl.edu	37	10	32197496	32197496	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	10	32197496	32197496	C	G	SNP	ARHGAP12	ENST00000344936	human	ensembl	69_37n	-1	known	missense	c.288	p.Q96H	1.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_Rsp5_WWP,smart_SH3_domain,smart_WW_Rsp5_WWP,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_Rsp5_WWP,pfscan_RhoGAP_dom	-	no_errors	ARHGAP12	HGNC	ENSG00000165322	246	0	0.00	93	85	47.75	-	-	-
ARID1A	0	genome.wustl.edu	37	1	27106136	27106136	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	27106136	27106136	C	G	SNP	ARID1A	ENST00000324856	human	ensembl	69_37n	+1	known	missense	c.5747	p.S1916C	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	230	0	0.00	115	62	34.83	-	-	-
ASAH2C	0	genome.wustl.edu	37	10	48033003	48033003	+	Silent	SNP	T	T	C			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	10	48033003	48033003	T	C	SNP	ASAH2C	ENST00000426610	human	ensembl	69_37n	-1	known	silent	c.522	p.K174	0.987	pfam_Ceramidase_alk	pfam_Ceramidase_alk	-	no_errors	ASAH2C	HGNC	ENSG00000072444	184	0	0.00	81	45	35.71	-	-	-
BRCA2	0	genome.wustl.edu	37	13	32912555	32912555	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	13	32912555	32912555	G	T	SNP	BRCA2	ENST00000380152	human	ensembl	69_37n	+1	known	missense	c.4063	p.D1355Y	0.011	pirsf_DNA_recomb/repair_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold-like,pirsf_DNA_recomb/repair_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618	100	0	0.00	60	20	24.69	-	-	-
CDK14	0	genome.wustl.edu	37	7	90377067	90377067	+	Silent	SNP	T	T	C			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	7	90377067	90377067	T	C	SNP	CDK14	ENST00000380050	human	ensembl	69_37n	+1	known	silent	c.441	p.A147	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK14	HGNC	ENSG00000058091	348	0	0.00	52	68	56.67	-	-	-
CR1	0	genome.wustl.edu	37	1	207669639	207669639	+	Silent	SNP	G	G	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	207669639	207669639	G	A	SNP	CR1	ENST00000367049	human	ensembl	69_37n	+1	known	silent	c.27	p.P9	0.000	NULL	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710	30	0	0.00	21	5	19.23	-	-	-
CXorf36	0	genome.wustl.edu	37	X	45013241	45013241	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	45013241	45013241	A	G	SNP	CXorf36	ENST00000398000	human	ensembl	69_37n	-1	known	missense	c.875	p.I292T	0.328	NULL	NULL	-	no_errors	CXorf36	HGNC	ENSG00000147113	76	0	0.00	50	29	36.71	-	-	-
F8	0	genome.wustl.edu	37	X	154157239	154157240	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	154157239	154157240	-	T	INS	F8	ENST00000360256	human	ensembl	69_37n	-1	known	frame_shift_ins	c.4826_4825	p.T1609fs	0.000:0.001	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	770	0	0.00	459	182	28.39	-	-	-
GGA3	0	genome.wustl.edu	37	17	73239562	73239562	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	17	73239562	73239562	C	T	SNP	GGA3	ENST00000584243	human	ensembl	69_37n	-1	known	missense	c.388	p.D130N	1.000	pfam_VHS,superfamily_ENTH_VHS,smart_VHS_subgr,pfscan_VHS	pfam_VHS,superfamily_ENTH_VHS,smart_VHS_subgr,pfscan_VHS	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	GGA3	HGNC	ENSG00000125447	96	0	0.00	69	32	31.68	-	-	-
GUCY2C	0	genome.wustl.edu	37	12	14839103	14839103	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	12	14839103	14839103	G	C	SNP	GUCY2C	ENST00000261170	human	ensembl	69_37n	-1	known	missense	c.387	p.F129L	1.000	pfam_ANF_lig-bd_rcpt	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019	45	0	0.00	29	10	25.64	-	-	-
HECTD4	0	genome.wustl.edu	37	12	112600859	112600860	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	12	112600859	112600860	-	G	INS	HECTD4	ENST00000377560	human	ensembl	69_37n	-1	known	frame_shift_ins	c.12591_12590	p.D4198fs	0.555:1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	63	0	0.00	23	3	11.54	-	-	-
KIDINS220	0	genome.wustl.edu	37	2	8871022	8871022	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	2	8871022	8871022	G	A	SNP	KIDINS220	ENST00000256707	human	ensembl	69_37n	-1	known	missense	c.5144	p.P1715L	0.966	NULL	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313	116	0	0.00	79	9	10.23	-	-	-
KIRREL	0	genome.wustl.edu	37	1	158047872	158047872	+	Silent	SNP	C	C	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	158047872	158047872	C	T	SNP	KIRREL	ENST00000368173	human	ensembl	69_37n	+1	known	silent	c.294	p.Y98	0.915	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	KIRREL	HGNC	ENSG00000183853	120	0	0.00	109	35	24.31	-	-	-
KLHL34	0	genome.wustl.edu	37	X	21675572	21675572	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	21675572	21675572	G	T	SNP	KLHL34	ENST00000379499	human	ensembl	69_37n	-1	known	missense	c.335	p.T112N	0.743	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL34	HGNC	ENSG00000185915	13	0	0.00	3	6	66.67	-	-	-
MUC16	0	genome.wustl.edu	37	19	8997511	8997511	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	19	8997511	8997511	G	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.40911	p.F13637L	0.001	pfam_SEA,pfscan_SEA	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	422	0	0.00	331	113	25.39	-	-	-
MUC6	0	genome.wustl.edu	37	11	1016078	1016079	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	11	1016078	1016079	-	G	INS	MUC6	ENST00000421673	human	ensembl	69_37n	-1	known	frame_shift_ins	c.6723_6722	p.A2242fs	0.000:0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	14	0	0.00	14	8	36.36	-	-	-
MYADML	0	genome.wustl.edu	37	2	33952092	33952092	+	RNA	SNP	C	C	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	2	33952092	33952092	C	A	SNP	MYADML	ENST00000474610	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649	36	0	0.00	14	6	30.00	-	-	-
NAV1	0	genome.wustl.edu	37	1	201687769	201687769	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	201687769	201687769	G	T	SNP	NAV1	ENST00000367296	human	ensembl	69_37n	+1	known	missense	c.1112	p.R371L	1.000	NULL	smart_AAA+_ATPase	-	no_errors	NAV1	HGNC	ENSG00000134369	83	0	0.00	16	39	70.91	-	-	-
NEFM	0	genome.wustl.edu	37	8	24774866	24774866	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	8	24774866	24774866	G	A	SNP	NEFM	ENST00000221166	human	ensembl	69_37n	+1	known	missense	c.1498	p.E500K	0.958	NULL	pfam_F,pfam_Intermed_filament_DNA-bd,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	NEFM	HGNC	ENSG00000104722	48	0	0.00	19	15	44.12	-	-	-
PCDHB16	0	genome.wustl.edu	37	5	140562339	140562339	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	5	140562339	140562339	C	T	SNP	PCDHB16	ENST00000361016	human	ensembl	69_37n	+1	known	nonsense	c.205	p.Q69*	0.003	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963	99	0	0.00	39	27	40.91	-	-	-
PCDHB16	0	genome.wustl.edu	37	5	140564292	140564292	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	5	140564292	140564292	G	T	SNP	PCDHB16	ENST00000361016	human	ensembl	69_37n	+1	known	missense	c.2158	p.A720S	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963	60	0	0.00	25	10	28.57	-	-	-
PIK3CG	0	genome.wustl.edu	37	7	106523500	106523500	+	Silent	SNP	C	C	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	7	106523500	106523500	C	T	SNP	PIK3CG	ENST00000359195	human	ensembl	69_37n	+1	known	silent	c.2652	p.D884	0.571	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851	395	1	0.25	110	105	48.84	-	-	-
PLK2	0	genome.wustl.edu	37	5	57753376	57753378	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	5	57753376	57753378	CAG	-	DEL	PLK2	ENST00000274289	human	ensembl	69_37n	-1	known	in_frame_del	c.748_746	p.PE249in_frame_delQ	1.000:0.947:1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	PLK2	HGNC	ENSG00000145632	65	0	0.00	20	3	12.00	-	-	-
PNMAL1	0	genome.wustl.edu	37	19	46973388	46973388	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	19	46973388	46973388	G	A	SNP	PNMAL1	ENST00000313683	human	ensembl	69_37n	-1	known	missense	c.905	p.A302V	0.000	NULL	NULL	-	no_errors	PNMAL1	HGNC	ENSG00000182013	152	0	0.00	69	47	40.17	-	-	-
QSER1	0	genome.wustl.edu	37	11	32954676	32954676	+	Silent	SNP	T	T	C			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	11	32954676	32954676	T	C	SNP	QSER1	ENST00000399302	human	ensembl	69_37n	+1	known	silent	c.1485	p.S495	0.648	NULL	NULL	-	no_errors	QSER1	HGNC	ENSG00000060749	236	1	0.42	111	81	42.19	-	-	-
RECQL5	0	genome.wustl.edu	37	17	73654533	73654533	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	17	73654533	73654533	C	T	SNP	RECQL5	ENST00000317905	human	ensembl	69_37n	-1	known	missense	c.994	p.A332T	0.989	pfam_Helicase_C,smart_Helicase_C,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_RecQ_helicase-like_5,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL5	HGNC	ENSG00000108469	98	0	0.00	168	168	49.85	-	-	-
RIMBP2	0	genome.wustl.edu	37	12	130935822	130935822	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	12	130935822	130935822	G	T	SNP	RIMBP2	ENST00000261655	human	ensembl	69_37n	-1	known	missense	c.371	p.P124H	0.022	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709	45	0	0.00	23	7	23.33	-	-	-
SCEL	0	genome.wustl.edu	37	13	78182240	78182240	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	13	78182240	78182240	A	T	SNP	SCEL	ENST00000349847	human	ensembl	69_37n	+1	known	missense	c.1207	p.S403C	0.014	NULL	smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	SCEL	HGNC	ENSG00000136155	113	1	0.88	106	25	19.08	-	-	-
SLC13A2	0	genome.wustl.edu	37	17	26818553	26818553	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	17	26818553	26818553	G	A	SNP	SLC13A2	ENST00000444914	human	ensembl	69_37n	+1	known	missense	c.820	p.V274M	0.878	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A2	HGNC	ENSG00000007216	71	0	0.00	25	13	34.21	-	-	-
SPON1	0	genome.wustl.edu	37	11	14279316	14279316	+	RNA	SNP	G	G	C			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	11	14279316	14279316	G	C	SNP	SPON1	ENST00000310358	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SPON1	HGNC	ENSG00000152268	32	0	0.00	16	8	33.33	-	-	-
TBC1D22B	0	genome.wustl.edu	37	6	37254787	37254787	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	6	37254787	37254787	A	G	SNP	TBC1D22B	ENST00000373491	human	ensembl	69_37n	+1	known	missense	c.806	p.H269R	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D22B	HGNC	ENSG00000065491	177	0	0.00	99	35	26.12	-	-	-
TNFRSF11A	0	genome.wustl.edu	37	18	60017101	60017101	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	18	60017101	60017101	G	A	SNP	TNFRSF11A	ENST00000586569	human	ensembl	69_37n	+1	known	missense	c.214	p.G72S	1.000	smart_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,prints_TNFR_11A,prints_TNFR_11,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF11A	HGNC	ENSG00000141655	231	0	0.00	179	68	27.53	-	-	-
TP53BP2	0	genome.wustl.edu	37	1	223991057	223991057	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	223991057	223991057	C	G	SNP	TP53BP2	ENST00000343537	human	ensembl	69_37n	-1	known	missense	c.747	p.E249D	1.000	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	TP53BP2	HGNC	ENSG00000143514	102	0	0.00	120	56	31.82	-	-	-
TRAFD1	0	genome.wustl.edu	37	12	112578753	112578753	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	12	112578753	112578753	T	G	SNP	TRAFD1	ENST00000257604	human	ensembl	69_37n	+1	known	missense	c.368	p.V123G	1.000	NULL	superfamily_TRAF-like	-	no_errors	TRAFD1	HGNC	ENSG00000135148	98	0	0.00	77	31	28.70	-	-	-
TRPC5	0	genome.wustl.edu	37	X	111078326	111078326	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	111078326	111078326	C	A	SNP	TRPC5	ENST00000262839	human	ensembl	69_37n	-1	known	missense	c.1719	p.Q573H	1.000	pfam_Ion_trans_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC5_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC5	HGNC	ENSG00000072315	491	1	0.20	412	82	16.60	-	-	-
XIAP	0	genome.wustl.edu	37	X	123019797	123019797	+	Silent	SNP	C	C	A			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	123019797	123019797	C	A	SNP	XIAP	ENST00000355640	human	ensembl	69_37n	+1	known	silent	c.285	p.G95	0.834	smart_BIR	pfam_BIR,smart_BIR,smart_Znf_RING,pfscan_BIR,pfscan_Znf_RING	-	no_errors	XIAP	HGNC	ENSG00000101966	142	0	0.00	103	47	31.33	-	-	-
ZDBF2	0	genome.wustl.edu	37	2	207171377	207171377	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	2	207171377	207171377	G	T	SNP	ZDBF2	ENST00000374423	human	ensembl	69_37n	+1	known	missense	c.2125	p.D709Y	0.962	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186	171	0	0.00	90	52	36.62	-	-	-
