Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACSBG2	0	genome.wustl.edu	37	19	6147661	6147661	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	19	6147661	6147661	G	A	SNP	ACSBG2	ENST00000252669	human	ensembl	69_37n	+1	known	missense	c.272	p.R91Q	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSBG2	HGNC	ENSG00000130377	351	1	0.28	268	174	39.37	-	-	-
AKD1	0	genome.wustl.edu	37	6	109815203	109815203	+	Frame_Shift_Del	DEL	A	A	-			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	6	109815203	109815203	A	-	DEL	AKD1	ENST00000424296	human	ensembl	69_37n	-1	known	frame_shift_del	c.5514	p.Y1838fs	0.078	NULL	pfam_Adenylate_kin,pfam_YHS,smart_AAA+_ATPase	-	no_errors	AKD1	HGNC	ENSG00000155085	128	0	0.00	223	36	13.74	-	-	-
ANK2	0	genome.wustl.edu	37	4	114277716	114277716	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	4	114277716	114277716	G	C	SNP	ANK2	ENST00000357077	human	ensembl	69_37n	+1	known	missense	c.7942	p.G2648R	0.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362	391	0	0.00	270	98	26.63	-	-	-
ATG14	0	genome.wustl.edu	37	14	55836555	55836555	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	14	55836555	55836555	C	T	SNP	ATG14	ENST00000247178	human	ensembl	69_37n	-1	known	missense	c.1261	p.D421N	1.000	NULL	pfam_UV_resistance/autophagy_Atg14	-	no_errors	ATG14	HGNC	ENSG00000126775	208	0	0.00	168	148	46.84	-	-	-
ATP11A	0	genome.wustl.edu	37	13	113516786	113516786	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	13	113516786	113516786	G	A	SNP	ATP11A	ENST00000375630	human	ensembl	69_37n	+1	known	missense	c.2888	p.R963H	0.998	tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP11A	HGNC	ENSG00000068650	15	0	0.00	10	10	50.00	-	-	-
BTF3L4	0	genome.wustl.edu	37	1	52530605	52530605	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	1	52530605	52530605	G	A	SNP	BTF3L4	ENST00000313334	human	ensembl	69_37n	+1	known	missense	c.163	p.E55K	1.000	pfam_Nas_poly-pep-assoc_cplx,pfscan_Nas_poly-pep-assoc_cplx	pfam_Nas_poly-pep-assoc_cplx,pfscan_Nas_poly-pep-assoc_cplx	-	no_errors	BTF3L4	HGNC	ENSG00000134717	74	0	0.00	57	15	20.83	-	-	-
C4orf51	0	genome.wustl.edu	37	4	146650349	146650350	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	4	146650349	146650350	-	T	INS	C4orf51	ENST00000438731	human	ensembl	69_37n	+1	known	frame_shift_ins	c.395_396	p.P134fs	0.000:0.002	NULL	NULL	-	no_errors	C4orf51	HGNC	ENSG00000237136	74	0	0.00	44	12	21.43	-	-	-
CADPS2	0	genome.wustl.edu	37	7	122269330	122269330	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	7	122269330	122269330	C	G	SNP	CADPS2	ENST00000449022	human	ensembl	69_37n	-1	known	missense	c.839	p.R280P	0.999	NULL	pfam_Ca-dep_secretion_activator,pfam_Pleckstrin_homology,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS2	HGNC	ENSG00000081803	64	0	0.00	50	48	48.98	-	-	-
CCDC33	0	genome.wustl.edu	37	15	74628287	74628287	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	15	74628287	74628287	G	A	SNP	CCDC33	ENST00000398814	human	ensembl	69_37n	+1	known	missense	c.2161	p.D721N	0.091	NULL	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_errors	CCDC33	HGNC	ENSG00000140481	96	0	0.00	10	45	81.82	-	-	-
CDH9	0	genome.wustl.edu	37	5	26881732	26881732	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	5	26881732	26881732	A	T	SNP	CDH9	ENST00000231021	human	ensembl	69_37n	-1	known	missense	c.1883	p.I628N	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH9	HGNC	ENSG00000113100	176	0	0.00	154	43	21.83	-	-	-
CHSY3	0	genome.wustl.edu	37	5	129243939	129243939	+	Missense_Mutation	SNP	G	G	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	5	129243939	129243939	G	T	SNP	CHSY3	ENST00000305031	human	ensembl	69_37n	+1	known	missense	c.972	p.R324S	1.000	pfam_Fringe-like	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY3	HGNC	ENSG00000198108	40	0	0.00	22	12	35.29	-	-	-
CLEC16A	0	genome.wustl.edu	37	16	11154764	11154764	+	Silent	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	16	11154764	11154764	C	T	SNP	CLEC16A	ENST00000409790	human	ensembl	69_37n	+1	known	silent	c.2001	p.I667	1.000	NULL	pfam_Uncharacterised_FPL	-	no_errors	CLEC16A	HGNC	ENSG00000038532	210	0	0.00	105	91	46.19	-	-	-
CLN3	0	genome.wustl.edu	37	16	28493476	28493476	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	16	28493476	28493476	A	G	SNP	CLN3	ENST00000359984	human	ensembl	69_37n	-1	known	missense	c.1006	p.S336P	1.000	pfam_Battenin_disease_Cln3,superfamily_MFS_dom_general_subst_transpt,pirsf_Battenin_disease_Cln3_subgr,prints_Battenin_disease_Cln3	pfam_Battenin_disease_Cln3,superfamily_MFS_dom_general_subst_transpt,pirsf_Battenin_disease_Cln3_subgr,prints_Battenin_disease_Cln3	-	no_errors	CLN3	HGNC	ENSG00000188603	18	0	0.00	10	13	56.52	-	-	-
CRNN	0	genome.wustl.edu	37	1	152382287	152382287	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	1	152382287	152382287	C	T	SNP	CRNN	ENST00000271835	human	ensembl	69_37n	-1	known	missense	c.1271	p.R424H	0.001	NULL	pfam_S100_Ca-bd_sub,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	CRNN	HGNC	ENSG00000143536	201	0	0.00	232	99	29.91	-	-	-
DAPK1	0	genome.wustl.edu	37	9	90256921	90256921	+	Nonsense_Mutation	SNP	C	C	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	9	90256921	90256921	C	G	SNP	DAPK1	ENST00000469640	human	ensembl	69_37n	+1	known	nonsense	c.866	p.S289*	0.997	superfamily_Kinase-like_dom	pfam_Prot_kinase_cat_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_Prot_kinase_cat_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	281	0	0.00	171	88	33.85	-	-	-
DLGAP3	0	genome.wustl.edu	37	1	35332720	35332720	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	1	35332720	35332720	C	T	SNP	DLGAP3	ENST00000235180	human	ensembl	69_37n	-1	known	missense	c.2650	p.E884K	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP3	HGNC	ENSG00000116544	50	0	0.00	20	17	45.95	-	-	-
DNAH3	0	genome.wustl.edu	37	16	21156695	21156695	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	16	21156695	21156695	C	A	SNP	DNAH3	ENST00000261383	human	ensembl	69_37n	-1	known	missense	c.255	p.L85F	0.997	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	47	0	0.00	37	48	56.47	-	-	-
DOT1L	0	genome.wustl.edu	37	19	2185865	2185865	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	19	2185865	2185865	A	G	SNP	DOT1L	ENST00000398665	human	ensembl	69_37n	+1	known	missense	c.137	p.E46G	1.000	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885	414	0	0.00	162	107	39.78	-	-	-
DSG3	0	genome.wustl.edu	37	18	29054365	29054365	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	18	29054365	29054365	C	T	SNP	DSG3	ENST00000257189	human	ensembl	69_37n	+1	known	nonsense	c.2383	p.Q795*	1.000	prints_Desmoglein	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmo_cadherin	-	no_errors	DSG3	HGNC	ENSG00000134757	177	0	0.00	95	26	21.49	-	-	-
DYNC2H1	0	genome.wustl.edu	37	11	103270428	103270429	+	Frame_Shift_Ins	INS	-	-	CGAT			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	11	103270428	103270429	-	CGAT	INS	DYNC2H1	ENST00000398093	human	ensembl	69_37n	+1	known	frame_shift_ins	c.12215_12216	p.Q4075fs	0.961:0.957	pfam_Dynein_heavy	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	55	0	0.00	92	37	28.68	-	-	-
ERBB2IP	0	genome.wustl.edu	37	5	65370887	65370887	+	Silent	SNP	C	C	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	5	65370887	65370887	C	G	SNP	ERBB2IP	ENST00000284037	human	ensembl	69_37n	+1	known	silent	c.3792	p.L1264	1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	ERBB2IP	HGNC	ENSG00000112851	300	0	0.00	194	74	27.61	-	-	-
ESAM	0	genome.wustl.edu	37	11	124628269	124628269	+	Silent	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	11	124628269	124628269	G	A	SNP	ESAM	ENST00000278927	human	ensembl	69_37n	-1	known	silent	c.225	p.F75	0.065	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	ESAM	HGNC	ENSG00000149564	30	0	0.00	15	6	28.57	-	-	-
ESD	0	genome.wustl.edu	37	13	47354111	47354112	+	Frame_Shift_Ins	INS	-	-	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	13	47354111	47354112	-	T	INS	ESD	ENST00000378720	human	ensembl	69_37n	-1	known	frame_shift_ins	c.559_558	p.A186fs	1.000:1.000	pfam_Esterase_put,pfam_Peptidase_S9,tigrfam_S-formylglutathione_hydrol	pfam_Esterase_put,pfam_Peptidase_S9,pfam_AXE1,tigrfam_S-formylglutathione_hydrol	-	no_errors	ESD	HGNC	ENSG00000139684	214	0	0.00	246	131	34.75	-	-	-
FAM13B	0	genome.wustl.edu	37	5	137354686	137354686	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	5	137354686	137354686	G	A	SNP	FAM13B	ENST00000033079	human	ensembl	69_37n	-1	known	missense	c.115	p.P39S	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	FAM13B	HGNC	ENSG00000031003	113	0	0.00	64	79	55.24	-	-	-
FBN3	0	genome.wustl.edu	37	19	8161889	8161890	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	19	8161889	8161890	-	G	INS	FBN3	ENST00000270509	human	ensembl	69_37n	-1	known	frame_shift_ins	c.5289_5288	p.V1764fs	1.000:1.000	pfam_EGF-like_Ca-bd,smart_EGF-like_Ca-bd,pirsf_Fibrillin,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd,pfam_TB_dom,pfam_EGF-like_dom,superfamily_TB_dom,smart_EGF-like,smart_EGF-like_Ca-bd,pirsf_Fibrillin,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	81	0	0.00	78	39	33.33	-	-	-
FGFR2	0	genome.wustl.edu	37	10	123258034	123258034	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	10	123258034	123258034	A	T	SNP	FGFR2	ENST00000457416	human	ensembl	69_37n	-1	known	missense	c.1650	p.N550K	1.000	pirsf_Tyr_kinase_fibroblast_GF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_fibroblast_GF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468	68	0	0.00	37	89	70.08	-	-	-
FXR2	0	genome.wustl.edu	37	17	7495184	7495184	+	Frame_Shift_Del	DEL	G	G	-			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	17	7495184	7495184	G	-	DEL	FXR2	ENST00000250113	human	ensembl	69_37n	-1	known	frame_shift_del	c.1986	p.L663fs	0.977	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR2	HGNC	ENSG00000129245	37	0	0.00	18	2	10.00	-	-	-
GBF1	0	genome.wustl.edu	37	10	104135342	104135342	+	Splice_Site	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	10	104135342	104135342	G	A	SNP	GBF1	ENST00000369983	human	ensembl	69_37n	+1	known	splice_site	c.3883+1	e29+1	1.000	-	-	-	no_errors	GBF1	HGNC	ENSG00000107862	76	0	0.00	42	15	26.32	-	-	-
GRIK3	0	genome.wustl.edu	37	1	37307537	37307537	+	Nonsense_Mutation	SNP	C	C	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	1	37307537	37307537	C	A	SNP	GRIK3	ENST00000373091	human	ensembl	69_37n	-1	known	nonsense	c.1330	p.E444*	1.000	smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	47	0	0.00	33	26	44.07	-	-	-
HLA-DRB1	0	genome.wustl.edu	37	6	32552156	32552156	+	Splice_Site	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	6	32552156	32552156	C	T	SNP	HLA-DRB1	ENST00000360004	human	ensembl	69_37n	-1	known	splice_site	c.101-1	e2-1	0.636	-	-	-	no_errors	HLA-DRB1	HGNC	ENSG00000196126	12	0	0.00	9	4	30.77	-	-	-
IGF2BP2	0	genome.wustl.edu	37	3	185367245	185367245	+	Missense_Mutation	SNP	A	A	C			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	3	185367245	185367245	A	C	SNP	IGF2BP2	ENST00000382199	human	ensembl	69_37n	-1	known	missense	c.1539	p.H513Q	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_RRM_dom,smart_RRM_dom,smart_KH_dom,pfscan_KH_dom_type_1,pfscan_RRM_dom	-	no_errors	IGF2BP2	HGNC	ENSG00000073792	48	0	0.00	53	40	42.55	-	-	-
KLHL1	0	genome.wustl.edu	37	13	70681654	70681654	+	Missense_Mutation	SNP	G	G	C			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	13	70681654	70681654	G	C	SNP	KLHL1	ENST00000377844	human	ensembl	69_37n	-1	known	missense	c.178	p.Q60E	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL1	HGNC	ENSG00000150361	60	0	0.00	22	22	50.00	-	-	-
KLK2	0	genome.wustl.edu	37	19	51379763	51379763	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	19	51379763	51379763	T	C	SNP	KLK2	ENST00000325321	human	ensembl	69_37n	+1	known	missense	c.242	p.F81S	0.001	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	KLK2	HGNC	ENSG00000167751	71	0	0.00	51	27	34.18	-	-	-
KRT2	0	genome.wustl.edu	37	12	53041976	53041976	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	12	53041976	53041976	T	A	SNP	KRT2	ENST00000309680	human	ensembl	69_37n	-1	known	missense	c.1103	p.E368V	0.940	pfam_F,superfamily_Prefoldin	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT2	HGNC	ENSG00000172867	191	0	0.00	111	64	36.16	-	-	-
LILRA5	0	genome.wustl.edu	37	19	54818710	54818710	+	Silent	SNP	T	T	C			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	19	54818710	54818710	T	C	SNP	LILRA5	ENST00000301219	human	ensembl	69_37n	-1	known	silent	c.888	p.A296	0.002	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	LILRA5	HGNC	ENSG00000187116	106	0	0.00	97	35	26.52	-	-	-
LIPE	0	genome.wustl.edu	37	19	42906899	42906899	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	19	42906899	42906899	C	T	SNP	LIPE	ENST00000244289	human	ensembl	69_37n	-1	known	missense	c.2827	p.E943K	0.000	NULL	pfam_HSL_N,pfam_AB_hydrolase_3,pfam_Steryl_acetyl_hydrolase	-	no_errors	LIPE	HGNC	ENSG00000079435	21	0	0.00	13	4	23.53	-	-	-
MPDZ	0	genome.wustl.edu	37	9	13175790	13175790	+	Missense_Mutation	SNP	C	C	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	9	13175790	13175790	C	G	SNP	MPDZ	ENST00000319217	human	ensembl	69_37n	-1	known	missense	c.3016	p.E1006Q	1.000	superfamily_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	35	0	0.00	29	17	36.96	-	-	-
MPDZ	0	genome.wustl.edu	37	9	13176329	13176329	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	9	13176329	13176329	C	T	SNP	MPDZ	ENST00000319217	human	ensembl	69_37n	-1	known	missense	c.2737	p.D913N	0.021	NULL	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	45	0	0.00	34	22	39.29	-	-	-
MYT1	0	genome.wustl.edu	37	20	62871685	62871685	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	20	62871685	62871685	G	A	SNP	MYT1	ENST00000536311	human	ensembl	69_37n	+1	known	missense	c.3331	p.E1111K	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132	11	0	0.00	5	6	54.55	-	-	-
NCK1	0	genome.wustl.edu	37	3	136667105	136667105	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	3	136667105	136667105	A	G	SNP	NCK1	ENST00000288986	human	ensembl	69_37n	+1	known	missense	c.944	p.N315S	1.000	pfam_SH2,smart_SH2,pirsf_Cytoplasmic_NCK,pfscan_SH2,prints_SH2	pfam_SH3_domain,pfam_SH3_2,pfam_SH2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pirsf_Cytoplasmic_NCK,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	NCK1	HGNC	ENSG00000158092	225	0	0.00	181	133	42.36	-	-	-
NXPE1	0	genome.wustl.edu	37	11	114393794	114393794	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	11	114393794	114393794	C	A	SNP	NXPE1	ENST00000424269	human	ensembl	69_37n	-1	known	missense	c.915	p.E305D	0.881	NULL	superfamily_Ig_E-set	-	no_errors	NXPE1	HGNC	ENSG00000095110	207	0	0.00	188	180	48.91	-	-	-
OR52B2	0	genome.wustl.edu	37	11	6190763	6190763	+	Missense_Mutation	SNP	T	T	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	11	6190763	6190763	T	G	SNP	OR52B2	ENST00000530810	human	ensembl	69_37n	-1	known	missense	c.794	p.H265P	0.013	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR52B2	HGNC	ENSG00000255307	186	0	0.00	135	105	43.75	-	-	-
PAPPA2	0	genome.wustl.edu	37	1	176738882	176738882	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	1	176738882	176738882	G	A	SNP	PAPPA2	ENST00000367662	human	ensembl	69_37n	+1	known	missense	c.4463	p.R1488H	1.000	superfamily_Complement_control_module,smart_Sushi_SCR_CCP	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl,superfamily_Complement_control_module,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	209	0	0.00	182	403	68.54	-	-	-
PCDHA13	0	genome.wustl.edu	37	5	140262514	140262514	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	5	140262514	140262514	G	A	SNP	PCDHA13	ENST00000289272	human	ensembl	69_37n	+1	known	missense	c.661	p.E221K	0.008	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	155	0	0.00	46	29	38.67	-	-	-
PDE3A	0	genome.wustl.edu	37	12	20766493	20766493	+	Silent	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	12	20766493	20766493	C	T	SNP	PDE3A	ENST00000359062	human	ensembl	69_37n	+1	known	silent	c.1128	p.A376	0.083	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3A	HGNC	ENSG00000172572	154	0	0.00	173	39	18.40	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	119	0	0.00	86	83	49.11	-	-	-
PRKCE	0	genome.wustl.edu	37	2	46411965	46411965	+	Missense_Mutation	SNP	T	T	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	2	46411965	46411965	T	A	SNP	PRKCE	ENST00000306156	human	ensembl	69_37n	+1	known	missense	c.2159	p.I720N	1.000	pfam_Pkinase_C,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_Ca-dep,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	PRKCE	HGNC	ENSG00000171132	101	0	0.00	60	48	44.44	-	-	-
PRKCE	0	genome.wustl.edu	37	2	46411966	46411966	+	Silent	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	2	46411966	46411966	C	T	SNP	PRKCE	ENST00000306156	human	ensembl	69_37n	+1	known	silent	c.2160	p.I720	1.000	pfam_Pkinase_C,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_Ca-dep,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	PRKCE	HGNC	ENSG00000171132	102	0	0.00	60	48	44.44	-	-	-
PTENP1	0	genome.wustl.edu	37	9	33676575	33676575	+	RNA	SNP	C	C	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	9	33676575	33676575	C	G	SNP	PTENP1	ENST00000532280	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.814	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	161	0	0.00	71	62	46.62	-	-	-
PTPN4	0	genome.wustl.edu	37	2	120718455	120718455	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	2	120718455	120718455	G	A	SNP	PTPN4	ENST00000263708	human	ensembl	69_37n	+1	known	missense	c.2206	p.D736N	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pirsf_Tyr_Pase_non-rcpt_typ-3/4,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,pfam_PDZ,pfam_FERM-adjacent,superfamily_FERM_central,superfamily_PDZ,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-3/4,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	PTPN4	HGNC	ENSG00000088179	252	0	0.00	185	125	40.32	-	-	-
SALL1	0	genome.wustl.edu	37	16	51171179	51171179	+	Silent	SNP	T	T	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	16	51171179	51171179	T	A	SNP	SALL1	ENST00000251020	human	ensembl	69_37n	-1	known	silent	c.3819	p.S1273	0.998	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449	43	0	0.00	30	30	50.00	-	-	-
SH3PXD2A	0	genome.wustl.edu	37	10	105484097	105484098	+	Frame_Shift_Ins	INS	-	-	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	10	105484097	105484098	-	G	INS	SH3PXD2A	ENST00000369774	human	ensembl	69_37n	-1	known	frame_shift_ins	c.329_328	p.H110fs	1.000:0.989	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2A	HGNC	ENSG00000107957	26	0	0.00	14	3	17.65	-	-	-
SLC9A9	0	genome.wustl.edu	37	3	142985726	142985726	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	3	142985726	142985726	C	T	SNP	SLC9A9	ENST00000316549	human	ensembl	69_37n	-1	known	missense	c.1756	p.E586K	0.967	NULL	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A9	HGNC	ENSG00000181804	103	0	0.00	83	20	19.42	-	-	-
SPO11	0	genome.wustl.edu	37	20	55908329	55908329	+	Missense_Mutation	SNP	T	T	C			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	20	55908329	55908329	T	C	SNP	SPO11	ENST00000371263	human	ensembl	69_37n	+1	known	missense	c.331	p.F111L	0.995	pfam_Spo11/TopoVI_A_N,superfamily_Spo11/TopoVI_A,prints_Meiotic_Spo11	pfam_Meiosis_Spo11,pfam_Spo11/TopoVI_A_N,superfamily_Spo11/TopoVI_A,prints_Meiotic_Spo11,prints_Spo11/TopoVI_A,prints_TopoVI_A	-	no_errors	SPO11	HGNC	ENSG00000054796	83	0	0.00	62	53	46.09	-	-	-
SSH1	0	genome.wustl.edu	37	12	109186215	109186215	+	Silent	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	12	109186215	109186215	C	T	SNP	SSH1	ENST00000326495	human	ensembl	69_37n	-1	known	silent	c.1740	p.R580	0.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH1	HGNC	ENSG00000084112	63	0	0.00	49	44	47.31	-	-	-
SSX7	0	genome.wustl.edu	37	X	52677374	52677374	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	X	52677374	52677374	C	T	SNP	SSX7	ENST00000298181	human	ensembl	69_37n	-1	known	missense	c.403	p.D135N	0.000	NULL	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX7	HGNC	ENSG00000187754	487	0	0.00	781	92	10.54	-	-	-
TBX3	0	genome.wustl.edu	37	12	115120672	115120672	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	12	115120672	115120672	G	A	SNP	TBX3	ENST00000257566	human	ensembl	69_37n	-1	known	missense	c.334	p.L112F	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX3	HGNC	ENSG00000135111	49	0	0.00	21	32	60.38	-	-	-
TCF20	0	genome.wustl.edu	37	22	42607000	42607000	+	Missense_Mutation	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	22	42607000	42607000	G	A	SNP	TCF20	ENST00000359486	human	ensembl	69_37n	-1	known	missense	c.4312	p.R1438C	1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	393	0	0.00	214	70	24.65	-	-	-
TCOF1	0	genome.wustl.edu	37	5	149777996	149777996	+	Silent	SNP	G	G	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	5	149777996	149777996	G	A	SNP	TCOF1	ENST00000451292	human	ensembl	69_37n	+1	known	silent	c.4533	p.Q1511	0.998	NULL	pfam_TCS_treacle,smart_LisH_dimerisation,pfscan_LisH_dimerisation,prints_Treacle-like_TCS	-	no_errors	TCOF1	HGNC	ENSG00000070814	152	0	0.00	40	73	64.60	-	-	-
TECRL	0	genome.wustl.edu	37	4	65180391	65180391	+	Nonsense_Mutation	SNP	T	T	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	4	65180391	65180391	T	A	SNP	TECRL	ENST00000381210	human	ensembl	69_37n	-1	known	nonsense	c.526	p.R176*	0.030	NULL	pfam_3-oxo-5_a-steroid_4-DH_C,pfscan_3-oxo-5_a-steroid_4-DH_C	-	no_errors	TECRL	HGNC	ENSG00000205678	29	0	0.00	43	7	14.00	-	-	-
TESK1	0	genome.wustl.edu	37	9	35609609	35609610	+	Frame_Shift_Ins	INS	-	-	C			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	9	35609609	35609610	-	C	INS	TESK1	ENST00000336395	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1751_1752	p.R586fs	1.000:1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	TESK1	HGNC	ENSG00000107140	25	0	0.00	22	3	12.00	-	-	-
UGT1A7	0	genome.wustl.edu	37	2	234591216	234591216	+	Nonsense_Mutation	SNP	C	C	G			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	2	234591216	234591216	C	G	SNP	UGT1A7	ENST00000485022	human	ensembl	69_37n	+1	putative	nonsense	c.203	p.S68*	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	UGT1A7	HGNC	ENSG00000244122	965	0	0.00	953	203	17.56	-	-	-
XRN2	0	genome.wustl.edu	37	20	21314348	21314348	+	Nonsense_Mutation	SNP	G	G	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	20	21314348	21314348	G	T	SNP	XRN2	ENST00000377191	human	ensembl	69_37n	+1	known	nonsense	c.940	p.E314*	1.000	pirsf_5_3_exoribonuclease_2	pfam_Put_53exo,superfamily_Znf_CCHC,pirsf_5_3_exoribonuclease_2	-	no_errors	XRN2	HGNC	ENSG00000088930	242	0	0.00	214	170	44.27	-	-	-
YAF2	0	genome.wustl.edu	37	12	42554570	42554570	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	12	42554570	42554570	C	T	SNP	YAF2	ENST00000442791	human	ensembl	69_37n	-1	known	missense	c.436	p.D146N	1.000	NULL	pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	YAF2	HGNC	ENSG00000015153	87	0	0.00	70	28	28.57	-	-	-
ZFP36L1	0	genome.wustl.edu	37	14	69256881	69256881	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	14	69256881	69256881	C	T	SNP	ZFP36L1	ENST00000336440	human	ensembl	69_37n	-1	known	missense	c.386	p.C129Y	1.000	pfam_Znf_CCCH,smart_Znf_CCCH	pfam_Tis11B_N,pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZFP36L1	HGNC	ENSG00000185650	84	0	0.00	63	37	37.00	-	-	-
ZNF99	0	genome.wustl.edu	37	19	22941252	22941252	+	Missense_Mutation	SNP	C	C	T			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	19	22941252	22941252	C	T	SNP	ZNF99	ENST00000397104	human	ensembl	69_37n	-1	known	missense	c.1186	p.G396S	0.964	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973	309	0	0.00	386	177	31.44	-	-	-
ZXDA	0	genome.wustl.edu	37	X	57935843	57935843	+	Missense_Mutation	SNP	C	C	A			TCGA-A8-A084-01A-21W-A019-09	TCGA-A8-A084-10A-01W-A021-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	6f6f7048-5b7a-4827-af2b-cfecc4a60025	23dc2b83-850f-4ae8-9e10-d7263ef23617	X	57935843	57935843	C	A	SNP	ZXDA	ENST00000358697	human	ensembl	69_37n	-1	known	missense	c.1012	p.G338C	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDA	HGNC	ENSG00000198205	26	0	0.00	28	11	28.21	-	-	-
