Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA13	0	genome.wustl.edu	37	7	48431660	48431660	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	7	48431660	48431660	C	T	SNP	ABCA13	ENST00000435803	human	ensembl	69_37n	+1	known	missense	c.11797	p.R3933W	0.000	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	77	0	0.00	49	10	16.95	-	-	-
ABCA9	0	genome.wustl.edu	37	17	67023189	67023189	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	17	67023189	67023189	G	-	DEL	ABCA9	ENST00000340001	human	ensembl	69_37n	-1	known	frame_shift_del	c.1978	p.L660fs	0.990	smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258	39	0	0.00	32	6	15.79	-	-	-
ADSSL1	0	genome.wustl.edu	37	14	105207543	105207543	+	Silent	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	14	105207543	105207543	G	A	SNP	ADSSL1	ENST00000332972	human	ensembl	69_37n	+1	known	silent	c.885	p.V295	1.000	pfam_Adenylosuccinate_synthetase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	pfam_Adenylosuccinate_synthetase,smart_Adenylosuccinate_synthetase,tigrfam_Adenylosuccinate_synthetase	-	no_errors	ADSSL1	HGNC	ENSG00000185100	82	0	0.00	62	12	16.22	-	-	-
AFP	0	genome.wustl.edu	37	4	74321366	74321366	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	4	74321366	74321366	G	A	SNP	AFP	ENST00000226359	human	ensembl	69_37n	+1	putative	missense	c.1804	p.E602K	0.000	superfamily_Serum_albumin-like,pirsf_Serum_albumin_subgr	pfam_Serum_albumin_N,superfamily_Serum_albumin-like,smart_Serum_albumin_N,pirsf_Serum_albumin_subgr,prints_Alpha-fetoprotein,prints_Serum_albumin	-	no_errors	AFP	HGNC	ENSG00000081051	75	0	0.00	84	15	15.15	-	-	-
AFP	0	genome.wustl.edu	37	4	74321384	74321384	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	4	74321384	74321384	G	T	SNP	AFP	ENST00000226359	human	ensembl	69_37n	+1	putative	nonsense	c.1822	p.E608*	0.004	pirsf_Serum_albumin_subgr	pfam_Serum_albumin_N,superfamily_Serum_albumin-like,smart_Serum_albumin_N,pirsf_Serum_albumin_subgr,prints_Alpha-fetoprotein,prints_Serum_albumin	-	no_errors	AFP	HGNC	ENSG00000081051	82	0	0.00	90	18	16.67	-	-	-
ALDH16A1	0	genome.wustl.edu	37	19	49973687	49973687	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	49973687	49973687	C	T	SNP	ALDH16A1	ENST00000293350	human	ensembl	69_37n	+1	known	missense	c.2372	p.A791V	0.993	pirsf_Aldehyde_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH	-	no_errors	ALDH16A1	HGNC	ENSG00000161618	50	0	0.00	80	19	19.19	-	-	-
ANKRD65	0	genome.wustl.edu	37	1	1354749	1354749	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	1354749	1354749	G	A	SNP	ANKRD65	ENST00000537107	human	ensembl	69_37n	-1	known	missense	c.931	p.R311W	0.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD65	HGNC	ENSG00000235098	128	0	0.00	114	16	12.31	-	-	-
C10orf90	0	genome.wustl.edu	37	10	128209867	128209867	+	Splice_Site	DEL	C	C	-			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	10	128209867	128209867	C	-	DEL	C10orf90	ENST00000284694	human	ensembl	69_37n	-1	known	splice_site_del	c.22+1	e1+1	0.998	-	-	-	no_errors	C10orf90	HGNC	ENSG00000154493	49	0	0.00	38	7	15.56	-	-	-
C17orf104	0	genome.wustl.edu	37	17	42751400	42751400	+	Missense_Mutation	SNP	C	C	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	17	42751400	42751400	C	A	SNP	C17orf104	ENST00000409122	human	ensembl	69_37n	+1	known	missense	c.2695	p.R899S	1.000	NULL	NULL	-	no_errors	C17orf104	HGNC	ENSG00000180336	76	0	0.00	37	31	45.59	-	-	-
C1orf127	0	genome.wustl.edu	37	1	11024262	11024262	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	11024262	11024262	G	A	SNP	C1orf127	ENST00000377004	human	ensembl	69_37n	-1	known	missense	c.439	p.R147C	0.029	NULL	superfamily_DNA-bd_dom_put	-	no_errors	C1orf127	HGNC	ENSG00000175262	111	0	0.00	70	19	21.35	-	-	-
C4orf21	0	genome.wustl.edu	37	4	113508772	113508772	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	4	113508772	113508772	C	T	SNP	C4orf21	ENST00000505019	human	ensembl	69_37n	-1	known	silent	c.3441	p.L1147	1.000	NULL	pfam_DUF2439,pfam_Znf_GRF	-	no_errors	C4orf21	HGNC	ENSG00000138658	34	0	0.00	25	8	24.24	-	-	-
C9orf9	0	genome.wustl.edu	37	9	135759367	135759367	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	9	135759367	135759367	C	T	SNP	C9orf9	ENST00000356311	human	ensembl	69_37n	+1	known	silent	c.33	p.I11	0.140	NULL	NULL	-	no_errors	C9orf9	HGNC	ENSG00000165698	60	0	0.00	34	4	10.53	-	-	-
CARS	0	genome.wustl.edu	37	11	3059366	3059366	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	11	3059366	3059366	G	A	SNP	CARS	ENST00000380525	human	ensembl	69_37n	-1	known	nonsense	c.715	p.Q239*	0.004	pfam_Cys-tRNA/MSH_ligase,tigrfam_Cys-tRNA-synt	pfam_Cys-tRNA/MSH_ligase,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,prints_Cys-tRNA/MSH_ligase,tigrfam_Cys-tRNA-synt	-	no_errors	CARS	HGNC	ENSG00000110619	76	0	0.00	61	7	10.29	-	-	-
CCNB3	0	genome.wustl.edu	37	X	50053142	50053142	+	Nonsense_Mutation	SNP	C	C	G			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	X	50053142	50053142	C	G	SNP	CCNB3	ENST00000276014	human	ensembl	69_37n	+1	known	nonsense	c.1973	p.S658*	0.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082	42	0	0.00	33	7	17.50	-	-	-
CDH1	0	genome.wustl.edu	37	16	68842658	68842659	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	16	68842658	68842659	-	A	INS	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_ins	c.594_595	p.T198fs	0.121:0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	55	0	0.00	9	6	40.00	-	-	-
CELSR1	0	genome.wustl.edu	37	22	46930419	46930419	+	Missense_Mutation	SNP	G	G	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	22	46930419	46930419	G	C	SNP	CELSR1	ENST00000454637	human	ensembl	69_37n	-1	putative	missense	c.773	p.S258W	0.064	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_EGF-like_dom,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,pfscan_EG-like_dom,pfscan_Cadherin,prints_Cadherin	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CELSR1	HGNC	ENSG00000075275	223	0	0.00	111	15	11.90	-	-	-
CENPO	0	genome.wustl.edu	37	2	25038422	25038422	+	Missense_Mutation	SNP	G	G	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	2	25038422	25038422	G	C	SNP	CENPO	ENST00000260662	human	ensembl	69_37n	+1	known	missense	c.391	p.E131Q	1.000	pfam_Centromere_CenpO	pfam_Centromere_CenpO	-	no_errors	CENPO	HGNC	ENSG00000138092	112	0	0.00	72	19	20.88	-	-	-
CNTNAP4	0	genome.wustl.edu	37	16	76592633	76592633	+	RNA	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	16	76592633	76592633	G	A	SNP	CNTNAP4	ENST00000469589	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	36	0	0.00	22	3	12.00	-	-	-
COBLL1	0	genome.wustl.edu	37	2	165542501	165542501	+	Silent	SNP	T	T	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	2	165542501	165542501	T	C	SNP	COBLL1	ENST00000194871	human	ensembl	69_37n	-1	known	silent	c.3657	p.S1219	0.535	NULL	pfam_Cordon-bleu_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	52	0	0.00	36	4	10.00	-	-	-
COL11A2	0	genome.wustl.edu	37	6	33133527	33133527	+	Missense_Mutation	SNP	C	C	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	6	33133527	33133527	C	A	SNP	COL11A2	ENST00000341947	human	ensembl	69_37n	-1	known	missense	c.4549	p.D1517Y	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibrinogen_a/b/g_C,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248	32	0	0.00	25	12	32.43	-	-	-
DDIT4	0	genome.wustl.edu	37	10	74033832	74033832	+	RNA	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	10	74033832	74033832	C	T	SNP	DDIT4	ENST00000473155	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DDIT4	HGNC	ENSG00000168209	31	0	0.00	13	7	33.33	-	-	-
DENND2D	0	genome.wustl.edu	37	1	111731934	111731934	+	RNA	SNP	T	T	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	111731934	111731934	T	C	SNP	DENND2D	ENST00000468692	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DENND2D	HGNC	ENSG00000162777	41	0	0.00	30	8	21.05	-	-	-
DGKK	0	genome.wustl.edu	37	X	50129373	50129373	+	RNA	SNP	A	A	G			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	X	50129373	50129373	A	G	SNP	DGKK	ENST00000376025	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DGKK	HGNC	ENSG00000204466	131	0	0.00	54	30	35.71	-	-	-
DHDH	0	genome.wustl.edu	37	19	49439288	49439288	+	Splice_Site	SNP	G	G	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	49439288	49439288	G	C	SNP	DHDH	ENST00000221403	human	ensembl	69_37n	+1	known	splice_site	c.203-1	e3-1	1.000	-	-	-	no_errors	DHDH	HGNC	ENSG00000104808	105	0	0.00	106	30	22.06	-	-	-
ELK4	0	genome.wustl.edu	37	1	205589824	205589824	+	Missense_Mutation	SNP	G	G	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	205589824	205589824	G	T	SNP	ELK4	ENST00000357992	human	ensembl	69_37n	-1	known	missense	c.350	p.S117Y	0.967	NULL	pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets	-	no_errors	ELK4	HGNC	ENSG00000158711	56	0	0.00	46	11	19.30	-	-	-
EPRS	0	genome.wustl.edu	37	1	220197789	220197789	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	220197789	220197789	C	T	SNP	EPRS	ENST00000366923	human	ensembl	69_37n	-1	known	missense	c.760	p.E254K	1.000	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,tigrfam_Glu-tRNA-synth_Ib_arc/euk	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,pfam_WHEP-TRS,pfam_Glu/Gln-tRNA-synth_Ib_codon-bd,pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Pro-tRNA_synth_II_C,pfam_Anticodon-bd,superfamily_Ribosomal_L25/Gln-tRNA_synth,superfamily_Anticodon-bd,superfamily_Pro-tRNA_synth_II,superfamily_S15_NS1_RNA-bd,superfamily_Glutathione-S-Trfase_C-like,smart_Pro-tRNA_synth_II_C,prints_Glu/Gln-tRNA-synth_Ib,prints_Pro-tRNA-synth_IIa,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_Pro-tRNA-synth_IIa_arc-type,tigrfam_Glu-tRNA-synth_Ib_arc/euk	-	no_errors	EPRS	HGNC	ENSG00000136628	41	0	0.00	60	13	17.81	-	-	-
EXOG	0	genome.wustl.edu	37	3	38537966	38537966	+	Silent	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	3	38537966	38537966	G	A	SNP	EXOG	ENST00000287675	human	ensembl	69_37n	+1	known	silent	c.108	p.L36	0.135	NULL	pfam_DNA/RNA_non-sp_Endonuclease,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A	-	no_errors	EXOG	HGNC	ENSG00000157036	183	0	0.00	151	65	29.95	-	-	-
FAM82A1	0	genome.wustl.edu	37	2	38201314	38201314	+	Missense_Mutation	SNP	G	G	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	2	38201314	38201314	G	T	SNP	FAM82A1	ENST00000234195	human	ensembl	69_37n	+1	known	missense	c.1118	p.G373V	0.001	NULL	NULL	-	no_errors	FAM82A1	HGNC	ENSG00000115841	32	0	0.00	34	4	10.53	-	-	-
FER1L4	0	genome.wustl.edu	37	20	34191783	34191783	+	RNA	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	20	34191783	34191783	C	T	SNP	FER1L4	ENST00000430275	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	FER1L4	HGNC	ENSG00000088340	58	0	0.00	33	9	21.43	-	-	-
FLG2	0	genome.wustl.edu	37	1	152325695	152325695	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	152325695	152325695	C	T	SNP	FLG2	ENST00000388718	human	ensembl	69_37n	-1	known	missense	c.4567	p.G1523S	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520	189	1	0.52	243	54	18.12	-	-	-
FXYD5	0	genome.wustl.edu	37	19	35650472	35650473	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	35650472	35650473	-	T	INS	FXYD5	ENST00000392218	human	ensembl	69_37n	+1	novel	frame_shift_ins	c.253_254	p.S86fs	0.001:0.001	NULL	NULL	-	no_errors	FXYD5	HGNC	ENSG00000089327	83	0	0.00	46	16	25.81	-	-	-
GRM7	0	genome.wustl.edu	37	3	7732913	7732913	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	3	7732913	7732913	C	T	SNP	GRM7	ENST00000389335	human	ensembl	69_37n	+1	known	silent	c.2715	p.L905	0.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_7,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM7	HGNC	ENSG00000196277	85	0	0.00	51	20	28.17	-	-	-
GRM7	0	genome.wustl.edu	37	3	7735320	7735320	+	Missense_Mutation	SNP	G	G	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	3	7735320	7735320	G	C	SNP	GRM7	ENST00000389336	human	ensembl	69_37n	+1	known	missense	c.2699	p.S900T	1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_7,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM7	HGNC	ENSG00000196277	51	0	0.00	33	7	17.07	-	-	-
HACL1	0	genome.wustl.edu	37	3	15642907	15642907	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	3	15642907	15642907	G	A	SNP	HACL1	ENST00000321169	human	ensembl	69_37n	-1	known	nonsense	c.64	p.Q22*	0.997	pfam_Thiamin_PyroP_enz_TPP-bd_dom	pfam_Thiamin_PyroP_enz_TPP-bd_dom,pfam_Thiamin_PyroP_enz_cen_dom,pfam_TPP_enzyme-bd_C,pfam_CO_DH_CoA_synth	-	no_errors	HACL1	HGNC	ENSG00000131373	88	0	0.00	53	7	11.67	-	-	-
IL4I1	0	genome.wustl.edu	37	19	50397597	50397597	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	50397597	50397597	C	T	SNP	IL4I1	ENST00000341114	human	ensembl	69_37n	-1	known	silent	c.561	p.K187	0.948	pfam_Amino_oxidase	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_CHP00275_HI0933-like,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_AlaDH/PNT_NAD(H)-bd,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	-	no_errors	IL4I1	HGNC	ENSG00000104951	88	0	0.00	30	13	30.23	-	-	-
JUNB	0	genome.wustl.edu	37	19	12902831	12902831	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	12902831	12902831	C	T	SNP	JUNB	ENST00000302754	human	ensembl	69_37n	+1	known	silent	c.246	p.L82	0.979	pfam_JNK	pfam_JNK,pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Jun	-	no_errors	JUNB	HGNC	ENSG00000171223	75	0	0.00	58	13	18.31	-	-	-
KIAA0146	0	genome.wustl.edu	37	8	48353017	48353017	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	8	48353017	48353017	G	A	SNP	KIAA0146	ENST00000297423	human	ensembl	69_37n	+1	known	missense	c.1010	p.G337E	0.000	NULL	NULL	-	no_errors	KIAA0146	HGNC	ENSG00000164808	65	0	0.00	51	10	16.39	-	-	-
KIAA0355	0	genome.wustl.edu	37	19	34832781	34832781	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	34832781	34832781	G	A	SNP	KIAA0355	ENST00000299505	human	ensembl	69_37n	+1	known	missense	c.1942	p.E648K	1.000	NULL	NULL	-	no_errors	KIAA0355	HGNC	ENSG00000166398	98	0	0.00	44	15	25.42	-	-	-
KNTC1	0	genome.wustl.edu	37	12	123022922	123022922	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	12	123022922	123022922	G	A	SNP	KNTC1	ENST00000333479	human	ensembl	69_37n	+1	known	missense	c.287	p.G96E	1.000	superfamily_WD40_repeat_dom	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445	49	0	0.00	14	11	44.00	-	-	-
KRT16P3	0	genome.wustl.edu	37	17	20405802	20405802	+	RNA	SNP	T	T	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	17	20405802	20405802	T	C	SNP	KRT16P3	ENST00000580621	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KRT16P3	HGNC	ENSG00000214822	32	0	0.00	51	7	12.07	-	-	-
L1TD1	0	genome.wustl.edu	37	1	62676024	62676024	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	62676024	62676024	C	T	SNP	L1TD1	ENST00000498273	human	ensembl	69_37n	+1	known	silent	c.1578	p.H526	0.001	NULL	pfam_Transposase_22,superfamily_STAT_TF_coiled-coil	-	no_errors	L1TD1	HGNC	ENSG00000240563	34	0	0.00	29	4	12.12	-	-	-
LILRB1	0	genome.wustl.edu	37	19	55144014	55144014	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	55144014	55144014	G	A	SNP	LILRB1	ENST00000324602	human	ensembl	69_37n	+1	known	missense	c.761	p.R254K	0.006	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LILRB1	HGNC	ENSG00000104972	120	0	0.00	123	44	26.35	-	-	-
LTN1	0	genome.wustl.edu	37	21	30342948	30342948	+	Silent	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	21	30342948	30342948	G	A	SNP	LTN1	ENST00000361371	human	ensembl	69_37n	-1	known	silent	c.1101	p.I367	1.000	superfamily_ARM-type_fold	pfam_Znf_C3HC4_RING-type,superfamily_ARM-type_fold,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	LTN1	HGNC	ENSG00000198862	70	0	0.00	49	19	27.94	-	-	-
MACC1	0	genome.wustl.edu	37	7	20193845	20193845	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	7	20193845	20193845	G	A	SNP	MACC1	ENST00000332878	human	ensembl	69_37n	-1	known	nonsense	c.2317	p.R773*	0.648	NULL	pfam_SH3_2,superfamily_DEATH-like	-	no_errors	MACC1	HGNC	ENSG00000183742	43	0	0.00	30	10	25.00	-	-	-
MUC1	0	genome.wustl.edu	37	1	155162590	155162590	+	Silent	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	155162590	155162590	G	A	SNP	MUC1	ENST00000425082	human	ensembl	69_37n	-1	known	silent	c.45	p.L15	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC1	HGNC	ENSG00000185499	88	0	0.00	68	14	17.07	-	-	-
NAF1	0	genome.wustl.edu	37	4	164085408	164085408	+	Missense_Mutation	SNP	C	C	G			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	4	164085408	164085408	C	G	SNP	NAF1	ENST00000274054	human	ensembl	69_37n	-1	known	missense	c.501	p.K167N	1.000	NULL	pfam_H/ACA_rnp_Gar1/Naf1,superfamily_Transl_elong_init/rib_B-barrel	-	no_errors	NAF1	HGNC	ENSG00000145414	24	0	0.00	24	5	17.24	-	-	-
NBEAL2	0	genome.wustl.edu	37	3	47049023	47049023	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	3	47049023	47049023	G	A	SNP	NBEAL2	ENST00000450053	human	ensembl	69_37n	+1	known	missense	c.7343	p.R2448Q	1.000	smart_WD40_repeat	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796	34	0	0.00	31	4	11.43	-	-	-
NEIL3	0	genome.wustl.edu	37	4	178274472	178274472	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	4	178274472	178274472	C	T	SNP	NEIL3	ENST00000264596	human	ensembl	69_37n	+1	known	silent	c.1050	p.L350	0.000	NULL	pfam_Znf_GRF,pfam_DNA_glyclase/AP_lyase_DNA-bd,pfam_Znf_RanBP2,superfamily_Ribosomal_S13-like_H2TH,superfamily_DNA_glycosylase/AP_lyase_cat,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_Znf_DNA_glyclase/AP_lyase,pfscan_DNA_glycosylase/AP_lyase_cat	-	no_errors	NEIL3	HGNC	ENSG00000109674	64	0	0.00	37	21	36.21	-	-	-
NOTCH2	0	genome.wustl.edu	37	1	120612003	120612004	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	120612003	120612004	GG	-	DEL	NOTCH2	ENST00000256646	human	ensembl	69_37n	-1	known	frame_shift_del	c.18_17	p.P6fs	0.101:0.700	pirsf_Notch	pirsf_Notch,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250	43	0	0.00	78	19	19.39	-	-	-
NTM	0	genome.wustl.edu	37	11	131781424	131781424	+	Missense_Mutation	SNP	G	G	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	11	131781424	131781424	G	C	SNP	NTM	ENST00000374786	human	ensembl	69_37n	+1	known	missense	c.49	p.V17L	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	NTM	HGNC	ENSG00000182667	105	0	0.00	137	57	29.38	-	-	-
NUP210	0	genome.wustl.edu	37	3	13378496	13378496	+	RNA	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	3	13378496	13378496	C	T	SNP	NUP210	ENST00000485755	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	NUP210	HGNC	ENSG00000132182	34	0	0.00	30	8	21.05	-	-	-
OR8K5	0	genome.wustl.edu	37	11	55927147	55927147	+	Missense_Mutation	SNP	A	A	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	11	55927147	55927147	A	T	SNP	OR8K5	ENST00000313447	human	ensembl	69_37n	-1	known	missense	c.647	p.V216E	0.003	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR8K5	HGNC	ENSG00000181752	41	0	0.00	34	15	30.61	-	-	-
PDXDC1	0	genome.wustl.edu	37	16	15126771	15126771	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	16	15126771	15126771	A	-	DEL	PDXDC1	ENST00000396410	human	ensembl	69_37n	+1	known	frame_shift_del	c.1625	p.N543fs	1.000	NULL	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	PDXDC1	HGNC	ENSG00000179889	77	0	0.00	46	9	16.07	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	52	0	0.00	55	22	28.57	-	-	-
PKP4	0	genome.wustl.edu	37	2	159481709	159481709	+	Missense_Mutation	SNP	C	C	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	2	159481709	159481709	C	A	SNP	PKP4	ENST00000389759	human	ensembl	69_37n	+1	known	missense	c.923	p.T308N	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283	29	0	0.00	25	15	37.50	-	-	-
POMT1	0	genome.wustl.edu	37	9	134382847	134382847	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	9	134382847	134382847	G	T	SNP	POMT1	ENST00000372228	human	ensembl	69_37n	+1	known	nonsense	c.373	p.E125*	1.000	pfam_Glyco_trans_39	pfam_Glyco_trans_39,pfam_MIR,superfamily_MIR,smart_MIR_motif,pfscan_MIR_motif	-	no_errors	POMT1	HGNC	ENSG00000130714	116	1	0.85	71	24	25.26	-	-	-
POTEB	0	genome.wustl.edu	37	15	22077592	22077592	+	Missense_Mutation	SNP	T	T	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	15	22077592	22077592	T	C	SNP	POTEB	ENST00000439682	human	ensembl	69_37n	-1	known	missense	c.638	p.E213G	0.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEB	HGNC	ENSG00000233917	9	0	0.00	11	7	38.89	-	-	-
PRB2	0	genome.wustl.edu	37	12	11546686	11546686	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	12	11546686	11546686	C	T	SNP	PRB2	ENST00000389362	human	ensembl	69_37n	-1	known	missense	c.326	p.R109Q	0.000	NULL	NULL	-	no_errors	PRB2	HGNC	ENSG00000121335	85	0	0.00	142	17	10.69	-	-	-
PRKAB1	0	genome.wustl.edu	37	12	120118061	120118061	+	Silent	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	12	120118061	120118061	G	A	SNP	PRKAB1	ENST00000229328	human	ensembl	69_37n	+1	known	silent	c.744	p.V248	1.000	pfam_AMP_prot_kin_bsu_interact-dom	pfam_AMP_prot_kin_bsu_interact-dom,superfamily_Ig_E-set	-	no_errors	PRKAB1	HGNC	ENSG00000111725	79	0	0.00	17	7	29.17	-	-	-
PTPN20A	0	genome.wustl.edu	37	10	46584514	46584514	+	Silent	SNP	T	T	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	10	46584514	46584514	T	C	SNP	PTPN20A	ENST00000374339	human	ensembl	69_37n	-1	known	silent	c.501	p.E167	0.220	smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN20A	HGNC	ENSG00000204179	10	0	0.00	11	6	35.29	-	-	-
PTPN20C	0	genome.wustl.edu	37	10	49291929	49291929	+	Silent	SNP	T	T	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	10	49291929	49291929	T	C	SNP	PTPN20C	ENST00000316733	human	ensembl	69_37n	-1	known	silent	c.492	p.E164	0.490	smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_start_codon	PTPN20C	HGNC	ENSG00000126542	42	0	0.00	49	6	10.91	-	-	-
RBAK	0	genome.wustl.edu	37	7	5103887	5103887	+	Missense_Mutation	SNP	G	G	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	7	5103887	5103887	G	T	SNP	RBAK	ENST00000353796	human	ensembl	69_37n	+1	known	missense	c.800	p.G267V	0.516	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	RBAK	HGNC	ENSG00000146587	31	0	0.00	25	8	24.24	-	-	-
RGPD4	0	genome.wustl.edu	37	2	108499277	108499277	+	Silent	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	2	108499277	108499277	G	A	SNP	RGPD4	ENST00000354986	human	ensembl	69_37n	+1	known	silent	c.5214	p.T1738	0.990	pfam_GRIP,superfamily_GRIP,smart_GRIP,pfscan_GRIP	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR-1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862	132	0	0.00	116	57	32.95	-	-	-
RSPH1	0	genome.wustl.edu	37	21	43916278	43916278	+	Missense_Mutation	SNP	C	C	G			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	21	43916278	43916278	C	G	SNP	RSPH1	ENST00000291536	human	ensembl	69_37n	-1	known	missense	c.19	p.E7Q	1.000	NULL	pfam_MORN,smart_MORN	-	no_errors	RSPH1	HGNC	ENSG00000160188	45	0	0.00	45	7	13.46	-	-	-
SGCE	0	genome.wustl.edu	37	7	94257530	94257530	+	Missense_Mutation	SNP	T	T	G			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	7	94257530	94257530	T	G	SNP	SGCE	ENST00000445866	human	ensembl	69_37n	-1	known	missense	c.374	p.K125T	1.000	pfam_Sarcoglycan_2,superfamily_Cadherin-like,smart_Cadg	pfam_Sarcoglycan_2,superfamily_Cadherin-like,smart_Cadg	-	no_errors	SGCE	HGNC	ENSG00000127990	73	0	0.00	41	10	19.61	-	-	-
SGSM1	0	genome.wustl.edu	37	22	25270489	25270489	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	22	25270489	25270489	G	A	SNP	SGSM1	ENST00000400359	human	ensembl	69_37n	+1	known	missense	c.1399	p.E467K	0.907	NULL	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM1	HGNC	ENSG00000167037	79	0	0.00	30	14	31.82	-	-	-
SLC26A2	0	genome.wustl.edu	37	5	149361212	149361212	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	5	149361212	149361212	T	-	DEL	SLC26A2	ENST00000286298	human	ensembl	69_37n	+1	known	frame_shift_del	c.2056	p.C686fs	0.998	pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A2	HGNC	ENSG00000155850	53	0	0.00	28	5	14.71	-	-	-
SLC35E1	0	genome.wustl.edu	37	19	16683056	16683056	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	16683056	16683056	C	T	SNP	SLC35E1	ENST00000409648	human	ensembl	69_37n	-1	known	silent	c.120	p.L40	1.000	NULL	pfam_DUF250,pfam_DMT,pfam_UAA	-	no_errors	SLC35E1	HGNC	ENSG00000127526	33	0	0.00	71	19	21.11	-	-	-
SLC35E1	0	genome.wustl.edu	37	19	16683100	16683100	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	16683100	16683100	C	T	SNP	SLC35E1	ENST00000409648	human	ensembl	69_37n	-1	known	missense	c.76	p.E26K	1.000	NULL	pfam_DUF250,pfam_DMT,pfam_UAA	-	no_errors	SLC35E1	HGNC	ENSG00000127526	16	0	0.00	35	14	28.57	-	-	-
SLC39A3	0	genome.wustl.edu	37	19	2737421	2737421	+	RNA	DEL	T	T	-			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	2737421	2737421	T	-	DEL	SLC39A3	ENST00000590875	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	SLC39A3	HGNC	ENSG00000141873	14	0	0.00	17	7	29.17	-	-	-
SLC5A8	0	genome.wustl.edu	37	12	101581287	101581287	+	Silent	SNP	G	G	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	12	101581287	101581287	G	C	SNP	SLC5A8	ENST00000536262	human	ensembl	69_37n	-1	known	silent	c.840	p.L280	0.987	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A8	HGNC	ENSG00000256870	32	0	0.00	12	5	29.41	-	-	-
SLC6A10P	0	genome.wustl.edu	37	16	32890814	32890814	+	RNA	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	16	32890814	32890814	C	T	SNP	SLC6A10P	ENST00000330048	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SLC6A10P	HGNC	ENSG00000214617	167	0	0.00	165	42	20.29	-	-	-
SMG1	0	genome.wustl.edu	37	16	18826809	18826809	+	Silent	SNP	G	G	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	16	18826809	18826809	G	C	SNP	SMG1	ENST00000389467	human	ensembl	69_37n	-1	known	silent	c.10470	p.L3490	1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106	61	0	0.00	31	13	29.55	-	-	-
SNUPN	0	genome.wustl.edu	37	15	75913265	75913265	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	15	75913265	75913265	C	T	SNP	SNUPN	ENST00000371091	human	ensembl	69_37n	-1	known	missense	c.254	p.R85H	1.000	pfam_Snurportin-1_N,pirsf_Snurportin-1,pfscan_Importin-a_IBB	pfam_Snurportin-1_N,pirsf_Snurportin-1,pfscan_Importin-a_IBB	-	no_errors	SNUPN	HGNC	ENSG00000169371	53	0	0.00	49	8	14.04	-	-	-
SNX27	0	genome.wustl.edu	37	1	151665018	151665018	+	Silent	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	151665018	151665018	G	A	SNP	SNX27	ENST00000368843	human	ensembl	69_37n	+1	known	silent	c.1347	p.T449	1.000	NULL	pfam_Phox,pfam_PDZ,pfam_Ras-assoc,superfamily_Phox,superfamily_PDZ,smart_PDZ,smart_Phox,pfscan_PDZ,pfscan_Phox,pfscan_Ras-assoc	-	no_errors	SNX27	HGNC	ENSG00000143376	88	0	0.00	66	19	22.35	-	-	-
SPAM1	0	genome.wustl.edu	37	7	123599693	123599693	+	Silent	SNP	C	C	G			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	7	123599693	123599693	C	G	SNP	SPAM1	ENST00000340011	human	ensembl	69_37n	+1	known	silent	c.1200	p.L400	0.973	pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Glyco_hydro_56_PH20,prints_Hyaluronidase	-	no_errors	SPAM1	HGNC	ENSG00000106304	50	0	0.00	41	9	18.00	-	-	-
SPANXN2	0	genome.wustl.edu	37	X	142795497	142795497	+	Missense_Mutation	SNP	T	T	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	X	142795497	142795497	T	C	SNP	SPANXN2	ENST00000370498	human	ensembl	69_37n	-1	known	missense	c.181	p.T61A	0.000	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXN2	HGNC	ENSG00000203924	160	0	0.00	78	71	47.65	-	-	-
SPATA13	0	genome.wustl.edu	37	13	24797937	24797937	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	13	24797937	24797937	G	A	SNP	SPATA13	ENST00000382141	human	ensembl	69_37n	+1	known	missense	c.982	p.E328K	0.099	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SPATA13	HGNC	ENSG00000182957	48	0	0.00	43	13	23.21	-	-	-
TAS2R41	0	genome.wustl.edu	37	7	143175315	143175315	+	Missense_Mutation	SNP	C	C	G			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	7	143175315	143175315	C	G	SNP	TAS2R41	ENST00000408916	human	ensembl	69_37n	+1	known	missense	c.350	p.S117C	0.631	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R41	HGNC	ENSG00000221855	62	0	0.00	60	23	27.71	-	-	-
TK2	0	genome.wustl.edu	37	16	66547661	66547661	+	Missense_Mutation	SNP	G	G	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	16	66547661	66547661	G	T	SNP	TK2	ENST00000299697	human	ensembl	69_37n	-1	known	missense	c.798	p.S266R	0.002	pfam_Deoxynucleoside_kinase	pfam_Deoxynucleoside_kinase	-	no_errors	TK2	HGNC	ENSG00000166548	41	0	0.00	25	5	16.67	-	-	-
TMEM169	0	genome.wustl.edu	37	2	216965075	216965075	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	2	216965075	216965075	C	T	SNP	TMEM169	ENST00000295658	human	ensembl	69_37n	+1	known	missense	c.704	p.S235L	1.000	NULL	NULL	-	no_errors	TMEM169	HGNC	ENSG00000163449	64	0	0.00	51	12	19.05	-	-	-
TNXB	0	genome.wustl.edu	37	6	32052279	32052279	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	6	32052279	32052279	G	A	SNP	TNXB	ENST00000375247	human	ensembl	69_37n	-1	known	missense	c.3356	p.S1119F	0.044	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C,superfamily_Fibronectin_type3,smart_EGF-like,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	66	0	0.00	57	18	24.00	-	-	-
TPST1	0	genome.wustl.edu	37	7	65705583	65705583	+	Silent	SNP	C	C	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	7	65705583	65705583	C	A	SNP	TPST1	ENST00000304842	human	ensembl	69_37n	+1	known	silent	c.171	p.L57	0.128	NULL	pfam_Sulfotransferase_dom	-	no_errors	TPST1	HGNC	ENSG00000169902	67	0	0.00	29	19	39.58	-	-	-
UCK2	0	genome.wustl.edu	37	1	165875181	165875181	+	Silent	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	1	165875181	165875181	C	T	SNP	UCK2	ENST00000367879	human	ensembl	69_37n	+1	known	silent	c.621	p.I207	0.958	pfam_PRK/URK,prints_Uridine_kinase,tigrfam_Uridine_kinase	pfam_PRK/URK,pfam_Depp_CoAkinase,prints_Uridine_kinase,prints_PRK,tigrfam_Uridine_kinase	-	no_errors	UCK2	HGNC	ENSG00000143179	125	0	0.00	109	37	25.34	-	-	-
ZNF16	0	genome.wustl.edu	37	8	146157647	146157647	+	Missense_Mutation	SNP	T	T	C			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	8	146157647	146157647	T	C	SNP	ZNF16	ENST00000276816	human	ensembl	69_37n	-1	known	missense	c.526	p.T176A	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF16	HGNC	ENSG00000170631	53	0	0.00	39	12	23.53	-	-	-
ZNF202	0	genome.wustl.edu	37	11	123597676	123597676	+	Missense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	11	123597676	123597676	C	T	SNP	ZNF202	ENST00000336139	human	ensembl	69_37n	-1	known	missense	c.976	p.E326K	0.295	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF202	HGNC	ENSG00000166261	37	0	0.00	23	6	20.69	-	-	-
ZNF544	0	genome.wustl.edu	37	19	58772398	58772398	+	Missense_Mutation	SNP	C	C	G			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	58772398	58772398	C	G	SNP	ZNF544	ENST00000269829	human	ensembl	69_37n	+1	known	missense	c.426	p.F142L	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF544	HGNC	ENSG00000198131	65	0	0.00	23	10	30.30	-	-	-
ZNF544	0	genome.wustl.edu	37	19	58772895	58772895	+	Missense_Mutation	SNP	C	C	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	58772895	58772895	C	A	SNP	ZNF544	ENST00000269829	human	ensembl	69_37n	+1	known	missense	c.923	p.S308Y	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF544	HGNC	ENSG00000198131	44	0	0.00	31	11	26.19	-	-	-
ZNF544	0	genome.wustl.edu	37	19	58773563	58773563	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	19	58773563	58773563	C	T	SNP	ZNF544	ENST00000269829	human	ensembl	69_37n	+1	known	nonsense	c.1591	p.Q531*	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF544	HGNC	ENSG00000198131	32	0	0.00	26	9	25.71	-	-	-
ZNF770	0	genome.wustl.edu	37	15	35273613	35273613	+	Missense_Mutation	SNP	G	G	A			TCGA-AC-A3W7-01A-11D-A228-09	TCGA-AC-A3W7-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	1d98bbae-0506-4428-99b1-c17109be2443	cfa4574d-c002-40e3-a7b5-f57a056ca98b	15	35273613	35273613	G	A	SNP	ZNF770	ENST00000356321	human	ensembl	69_37n	-1	known	missense	c.2023	p.H675Y	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF770	HGNC	ENSG00000198146	101	0	0.00	53	19	26.39	-	-	-
