Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA10	0	genome.wustl.edu	37	17	67212118	67212118	+	Missense_Mutation	SNP	A	A	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	17	67212118	67212118	A	T	SNP	ABCA10	ENST00000269081	human	ensembl	69_37n	-1	known	missense	c.696	p.S232R	0.008	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	61	0	0.00	63	15	19.23	-	-	-
ABCA13	0	genome.wustl.edu	37	7	48545981	48545981	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	48545981	48545981	C	T	SNP	ABCA13	ENST00000453246	human	ensembl	69_37n	+1	known	nonsense	c.2137	p.Q713*	1.000	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	ABCA13	HGNC	ENSG00000179869	306	1	0.33	286	172	37.47	-	-	-
AKAP9	0	genome.wustl.edu	37	7	91630767	91630767	+	Silent	SNP	C	C	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	91630767	91630767	C	G	SNP	AKAP9	ENST00000359028	human	ensembl	69_37n	+1	known	silent	c.1572	p.L524	0.974	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB-like	-	no_errors	AKAP9	HGNC	ENSG00000127914	47	0	0.00	38	12	24.00	-	-	-
AOX1	0	genome.wustl.edu	37	2	201523930	201523930	+	Silent	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	201523930	201523930	C	T	SNP	AOX1	ENST00000374700	human	ensembl	69_37n	+1	known	silent	c.3214	p.L1072	1.000	pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase	-	no_errors	AOX1	HGNC	ENSG00000138356	172	0	0.00	155	23	12.85	-	-	-
ATP5F1	0	genome.wustl.edu	37	1	111999346	111999346	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	111999346	111999346	A	G	SNP	ATP5F1	ENST00000369722	human	ensembl	69_37n	+1	known	missense	c.482	p.Q161R	1.000	pfam_ATPase_F0-cplx_bsu_mt	pfam_ATPase_F0-cplx_bsu_mt	-	no_errors	ATP5F1	HGNC	ENSG00000116459	102	0	0.00	43	13	22.81	-	-	-
ATRX	0	genome.wustl.edu	37	X	76937079	76937079	+	Silent	SNP	T	T	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	X	76937079	76937079	T	C	SNP	ATRX	ENST00000373344	human	ensembl	69_37n	-1	known	silent	c.3669	p.E1223	0.992	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	210	0	0.00	125	38	23.31	-	-	-
C16orf96	0	genome.wustl.edu	37	16	4624728	4624728	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	16	4624728	4624728	G	T	SNP	C16orf96	ENST00000444310	human	ensembl	69_37n	+1	known	missense	c.544	p.D182Y	0.000	NULL	NULL	-	no_errors	C16orf96	HGNC	ENSG00000205832	49	0	0.00	23	7	23.33	-	-	-
C1orf116	0	genome.wustl.edu	37	1	207195327	207195327	+	Silent	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	207195327	207195327	C	T	SNP	C1orf116	ENST00000359470	human	ensembl	69_37n	-1	known	silent	c.1782	p.K594	1.000	NULL	NULL	-	no_errors	C1orf116	HGNC	ENSG00000182795	175	0	0.00	96	31	24.41	-	-	-
C1orf122	0	genome.wustl.edu	37	1	38274673	38274674	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	38274673	38274674	-	C	INS	C1orf122	ENST00000446260	human	ensembl	69_37n	+1	known	frame_shift_ins	c.347_348	p.S119fs	0.772:0.677	NULL	NULL	-	no_errors	C1orf122	HGNC	ENSG00000197982	18	0	0.00	3	3	50.00	-	-	-
C20orf26	0	genome.wustl.edu	37	20	20054946	20054946	+	Missense_Mutation	SNP	C	C	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	20	20054946	20054946	C	A	SNP	C20orf26	ENST00000245957	human	ensembl	69_37n	+1	known	missense	c.295	p.P99T	1.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101	242	0	0.00	150	127	45.85	-	-	-
C9orf123	0	genome.wustl.edu	37	9	7799564	7799564	+	Silent	SNP	C	C	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	9	7799564	7799564	C	A	SNP	C9orf123	ENST00000358227	human	ensembl	69_37n	-1	known	silent	c.171	p.G57	0.927	NULL	NULL	-	no_errors	C9orf123	HGNC	ENSG00000137038	59	0	0.00	32	7	17.95	-	-	-
CACHD1	0	genome.wustl.edu	37	1	65129390	65129390	+	Missense_Mutation	SNP	T	T	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	65129390	65129390	T	G	SNP	CACHD1	ENST00000371073	human	ensembl	69_37n	+1	known	missense	c.1964	p.I655S	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfscan_VWF_A	-	no_errors	CACHD1	HGNC	ENSG00000158966	117	0	0.00	128	20	13.51	-	-	-
CALD1	0	genome.wustl.edu	37	7	134618765	134618765	+	Silent	SNP	G	G	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	134618765	134618765	G	A	SNP	CALD1	ENST00000361675	human	ensembl	69_37n	+1	novel	silent	c.1245	p.G415	0.983	pfam_Caldesmon_LSP	pfam_Caldesmon_LSP,prints_Caldesmon	-	no_errors	CALD1	HGNC	ENSG00000122786	816	0	0.00	810	230	22.09	-	-	-
CASQ2	0	genome.wustl.edu	37	1	116280859	116280859	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	116280859	116280859	C	T	SNP	CASQ2	ENST00000261448	human	ensembl	69_37n	-1	known	missense	c.518	p.S173N	0.968	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	-	no_errors	CASQ2	HGNC	ENSG00000118729	211	0	0.00	193	33	14.60	-	-	-
CDH26	0	genome.wustl.edu	37	20	58564054	58564054	+	Silent	SNP	G	G	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	20	58564054	58564054	G	T	SNP	CDH26	ENST00000244047	human	ensembl	69_37n	+1	known	silent	c.1119	p.P373	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	145	0	0.00	146	29	16.38	-	-	-
CHURC1-FNTB	0	genome.wustl.edu	37	14	65381251	65381251	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	14	65381251	65381251	G	A	SNP	CHURC1-FNTB	ENST00000447296	human	ensembl	69_37n	+1	known	missense	c.38	p.R13Q	1.000	pfam_Transcrpt_activator_Churchill	pfam_Prenyltrans,pfam_Transcrpt_activator_Churchill,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	CHURC1-FNTB	HGNC	ENSG00000125954	85	0	0.00	31	12	27.91	-	-	-
CLDN12	0	genome.wustl.edu	37	7	90042574	90042574	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	90042574	90042574	G	C	SNP	CLDN12	ENST00000287916	human	ensembl	69_37n	+1	known	missense	c.584	p.W195S	1.000	NULL	prints_Claudin12	-	no_errors	CLDN12	HGNC	ENSG00000157224	109	1	0.91	56	31	35.63	-	-	-
CLIC2	0	genome.wustl.edu	37	X	154528458	154528458	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	X	154528458	154528458	C	T	SNP	CLIC2	ENST00000369449	human	ensembl	69_37n	-1	known	missense	c.58	p.A20T	1.000	superfamily_Thioredoxin-like_fold,tigrfam_Int_Cl_channel	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC2	HGNC	ENSG00000155962	299	0	0.00	280	32	10.26	-	-	-
CNTLN	0	genome.wustl.edu	37	9	17235755	17235755	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	9	17235755	17235755	G	C	SNP	CNTLN	ENST00000380647	human	ensembl	69_37n	+1	known	missense	c.634	p.E212Q	1.000	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	320	0	0.00	140	57	28.93	-	-	-
COMP	0	genome.wustl.edu	37	19	18902064	18902064	+	Silent	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	19	18902064	18902064	G	C	SNP	COMP	ENST00000222271	human	ensembl	69_37n	-1	known	silent	c.15	p.T5	0.938	NULL	pfam_Thrombospondin_C,pfam_EGF-like_Ca-bd,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,superfamily_ConA-like_lec_gl,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	COMP	HGNC	ENSG00000105664	60	0	0.00	43	10	18.87	-	-	-
CREB3L1	0	genome.wustl.edu	37	11	46332608	46332609	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	11	46332608	46332609	-	C	INS	CREB3L1	ENST00000288400	human	ensembl	69_37n	+1	known	frame_shift_ins	c.621_622	p.S209fs	0.542:1.000	NULL	pfam_bZIP_1,pfam_bZIP_2,superfamily_Euk_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_CREB	-	no_errors	CREB3L1	HGNC	ENSG00000157613	29	0	0.00	27	3	10.00	-	-	-
CSMD1	0	genome.wustl.edu	37	8	2818711	2818711	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	8	2818711	2818711	G	T	SNP	CSMD1	ENST00000520002	human	ensembl	69_37n	-1	known	missense	c.9657	p.D3219E	1.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	116	0	0.00	75	14	15.73	-	-	-
CYP3A7	0	genome.wustl.edu	37	7	99306819	99306819	+	Silent	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	99306819	99306819	G	C	SNP	CYP3A7	ENST00000336374	human	ensembl	69_37n	-1	known	silent	c.1092	p.L364	0.995	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_CYP3A,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP3A7	HGNC	ENSG00000160870	546	0	0.00	237	62	20.74	-	-	-
DHX15	0	genome.wustl.edu	37	4	24529618	24529618	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	4	24529618	24529618	G	A	SNP	DHX15	ENST00000336812	human	ensembl	69_37n	-1	known	nonsense	c.2317	p.Q773*	1.000	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606	247	1	0.40	98	40	28.37	-	-	-
DLD	0	genome.wustl.edu	37	7	107533688	107533688	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	107533688	107533688	C	T	SNP	DLD	ENST00000205402	human	ensembl	69_37n	+1	known	missense	c.83	p.S28F	1.000	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_FAD_bind_dom,pfam_GIDA-rel,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,prints_Pyridine_nuc-diS_OxRdtase_2,tigrfam_Lipoamide_DH	-	no_errors	DLD	HGNC	ENSG00000091140	184	0	0.00	117	22	15.83	-	-	-
DST	0	genome.wustl.edu	37	6	56473517	56473517	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	6	56473517	56473517	A	-	DEL	DST	ENST00000370754	human	ensembl	69_37n	-1	known	frame_shift_del	c.5810	p.L1937fs	1.000	superfamily_ABC_transptrTM_dom_typ1,smart_Plectin_repeat	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	DST	HGNC	ENSG00000151914	142	0	0.00	107	33	23.40	-	-	-
ENPP1	0	genome.wustl.edu	37	6	132207728	132207728	+	Missense_Mutation	SNP	A	A	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	6	132207728	132207728	A	C	SNP	ENPP1	ENST00000360971	human	ensembl	69_37n	+1	known	missense	c.2471	p.E824A	0.999	pfam_DNA/RNA_non-sp_Endonuclease,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENPP1	HGNC	ENSG00000197594	177	0	0.00	45	21	31.82	-	-	-
ERCC5	0	genome.wustl.edu	37	13	103514800	103514800	+	Missense_Mutation	SNP	T	T	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	13	103514800	103514800	T	C	SNP	ERCC5	ENST00000355739	human	ensembl	69_37n	+1	known	missense	c.1301	p.V434A	0.000	tigrfam_XPGC_DNA_repair	pfam_XPG_DNA_repair_N,pfam_XPG/RAD2_endonuclease,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG/RAD2_endonuclease,smart_HhH2,prints_XPGC_DNA_repair,prints_XPGC_Rad_DNA_repair,tigrfam_XPGC_DNA_repair	-	no_errors	ERCC5	HGNC	ENSG00000134899	191	0	0.00	153	42	21.54	-	-	-
EYA1	0	genome.wustl.edu	37	8	72211888	72211888	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	8	72211888	72211888	A	G	SNP	EYA1	ENST00000465115	human	ensembl	69_37n	-1	known	missense	c.542	p.L181S	1.000	NULL	NULL	-	no_errors	EYA1	HGNC	ENSG00000104313	235	0	0.00	137	35	20.35	-	-	-
FAM123A	0	genome.wustl.edu	37	13	25744436	25744437	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	13	25744436	25744437	-	C	INS	FAM123A	ENST00000515384	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1322_1321	p.D441fs	1.000:1.000	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	-	no_errors	FAM123A	HGNC	ENSG00000165566	46	0	0.00	31	10	24.39	-	-	-
FBXO24	0	genome.wustl.edu	37	7	100189458	100189458	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	100189458	100189458	C	T	SNP	FBXO24	ENST00000427939	human	ensembl	69_37n	+1	known	missense	c.605	p.S202F	1.000	NULL	pfam_F-box_dom_cyclin-like,pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like,pfscan_Reg_chr_condens	-	no_errors	FBXO24	HGNC	ENSG00000106336	137	0	0.00	128	39	23.35	-	-	-
FLNA	0	genome.wustl.edu	37	X	153593247	153593247	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	X	153593247	153593247	G	T	SNP	FLNA	ENST00000420627	human	ensembl	69_37n	-1	known	missense	c.1726	p.R576S	0.754	NULL	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_start_codon	FLNA	HGNC	ENSG00000196924	25	0	0.00	38	10	20.83	-	-	-
GAL3ST1	0	genome.wustl.edu	37	22	30951010	30951010	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	22	30951010	30951010	A	G	SNP	GAL3ST1	ENST00000338911	human	ensembl	69_37n	-1	known	missense	c.1202	p.L401P	1.000	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase	-	no_errors	GAL3ST1	HGNC	ENSG00000128242	29	0	0.00	25	8	24.24	-	-	-
GCN1L1	0	genome.wustl.edu	37	12	120591094	120591094	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	12	120591094	120591094	G	C	SNP	GCN1L1	ENST00000300648	human	ensembl	69_37n	-1	known	missense	c.3985	p.H1329D	1.000	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154	74	0	0.00	40	11	21.57	-	-	-
GFPT2	0	genome.wustl.edu	37	5	179739534	179739534	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	5	179739534	179739534	C	T	SNP	GFPT2	ENST00000253778	human	ensembl	69_37n	-1	known	missense	c.1442	p.S481N	1.000	pfam_SIS,tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT2	HGNC	ENSG00000131459	102	0	0.00	79	17	17.71	-	-	-
GLI2	0	genome.wustl.edu	37	2	121743981	121743981	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	121743981	121743981	C	T	SNP	GLI2	ENST00000361492	human	ensembl	69_37n	+1	known	missense	c.2084	p.T695M	0.976	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047	86	0	0.00	41	14	25.45	-	-	-
GPR112	0	genome.wustl.edu	37	X	135428727	135428727	+	Silent	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	X	135428727	135428727	C	T	SNP	GPR112	ENST00000370652	human	ensembl	69_37n	+1	known	silent	c.2862	p.P954	0.004	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920	262	0	0.00	260	66	20.25	-	-	-
HAS1	0	genome.wustl.edu	37	19	52217239	52217239	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	19	52217239	52217239	C	G	SNP	HAS1	ENST00000222115	human	ensembl	69_37n	-1	known	missense	c.1178	p.W393S	1.000	NULL	pfam_Chitin_synth_fng,pfam_Glyco_trans_2	-	no_errors	HAS1	HGNC	ENSG00000105509	176	0	0.00	103	36	25.71	-	-	-
HIST2H2AC	0	genome.wustl.edu	37	1	149858811	149858811	+	Missense_Mutation	SNP	A	A	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	149858811	149858811	A	T	SNP	HIST2H2AC	ENST00000331380	human	ensembl	69_37n	+1	known	missense	c.287	p.K96M	1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST2H2AC	HGNC	ENSG00000184260	264	1	0.37	180	53	22.65	-	-	-
JTB	0	genome.wustl.edu	37	1	153948314	153948314	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	153948314	153948314	T	-	DEL	JTB	ENST00000271843	human	ensembl	69_37n	-1	known	frame_shift_del	c.272	p.N91fs	0.834	pfam_JTB	pfam_JTB	-	no_errors	JTB	HGNC	ENSG00000143543	254	0	0.00	150	51	25.12	-	-	-
KALRN	0	genome.wustl.edu	37	3	124418847	124418847	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	3	124418847	124418847	G	C	SNP	KALRN	ENST00000360013	human	ensembl	69_37n	+1	known	missense	c.7963	p.E2655Q	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_DH-domain,pfam_Prot_kinase_cat_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	247	1	0.40	152	50	24.75	-	-	-
KCNC3	0	genome.wustl.edu	37	19	50826555	50826556	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	19	50826555	50826556	-	G	INS	KCNC3	ENST00000477616	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1655_1654	p.K552fs	1.000:1.000	prints_K_chnl_volt-dep_Kv3	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398	43	0	0.00	31	4	11.43	-	-	-
KCNC3	0	genome.wustl.edu	37	19	50826558	50826559	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	19	50826558	50826559	-	GA	INS	KCNC3	ENST00000477616	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1652_1651	p.A551fs	1.000:1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398	45	0	0.00	34	4	10.53	-	-	-
KCNH2	0	genome.wustl.edu	37	7	150647101	150647101	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	150647101	150647101	G	T	SNP	KCNH2	ENST00000430723	human	ensembl	69_37n	-1	known	missense	c.2553	p.S851R	0.000	smart_cNMP-bd_dom	pfam_Ion_trans_dom,pfam_Ion_trans_2,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118	129	0	0.00	39	12	23.53	-	-	-
KLHL25	0	genome.wustl.edu	37	15	86311929	86311929	+	Silent	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	15	86311929	86311929	C	T	SNP	KLHL25	ENST00000337975	human	ensembl	69_37n	-1	known	silent	c.1113	p.A371	0.386	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL25	HGNC	ENSG00000183655	38	0	0.00	32	5	13.51	-	-	-
KRT23	0	genome.wustl.edu	37	17	39092736	39092737	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	17	39092736	39092737	-	C	INS	KRT23	ENST00000209718	human	ensembl	69_37n	-1	known	frame_shift_ins	c.120_119	p.A41fs	0.000:0.968	NULL	pfam_F,prints_Keratin_I	-	no_errors	KRT23	HGNC	ENSG00000108244	38	0	0.00	24	3	11.11	-	-	-
LMTK3	0	genome.wustl.edu	37	19	49004805	49004805	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	19	49004805	49004805	C	T	SNP	LMTK3	ENST00000270238	human	ensembl	69_37n	-1	known	missense	c.896	p.R299H	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC	ENSG00000142235	119	0	0.00	81	30	27.03	-	-	-
LRP6	0	genome.wustl.edu	37	12	12397385	12397385	+	Missense_Mutation	SNP	T	T	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	12	12397385	12397385	T	A	SNP	LRP6	ENST00000261349	human	ensembl	69_37n	-1	known	missense	c.260	p.Q87L	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EGF-like,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP6	HGNC	ENSG00000070018	327	0	0.00	133	45	25.28	-	-	-
MAP2K4	0	genome.wustl.edu	37	17	12011108	12011109	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	17	12011108	12011109	-	T	INS	MAP2K4	ENST00000415385	human	ensembl	69_37n	+1	known	frame_shift_ins	c.548_549	p.D184fs	1.000:1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP2K4	HGNC	ENSG00000065559	233	0	0.00	135	56	29.32	-	-	-
MBD1	0	genome.wustl.edu	37	18	47800615	47800615	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	18	47800615	47800615	C	T	SNP	MBD1	ENST00000424334	human	ensembl	69_37n	-1	known	missense	c.1240	p.G414R	1.000	pfam_Znf_CXXC,pfscan_Znf_CXXC	pfam_Znf_CXXC,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_integrase-typ,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_CXXC	-	no_errors	MBD1	HGNC	ENSG00000141644	53	0	0.00	24	6	20.00	-	-	-
MCTP2	0	genome.wustl.edu	37	15	94910918	94910918	+	Silent	SNP	T	T	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	15	94910918	94910918	T	A	SNP	MCTP2	ENST00000357742	human	ensembl	69_37n	+1	known	silent	c.1386	p.L462	0.004	superfamily_C2_Ca/lipid-bd_dom_CaLB	pfam_C2_Ca-dep,pfam_PRibTrfase_C,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	MCTP2	HGNC	ENSG00000140563	69	0	0.00	102	13	11.30	-	-	-
MDN1	0	genome.wustl.edu	37	6	90388354	90388354	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	6	90388354	90388354	C	T	SNP	MDN1	ENST00000369393	human	ensembl	69_37n	-1	known	missense	c.12376	p.A4126T	1.000	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	125	0	0.00	72	11	13.10	-	-	-
MIR532	0	genome.wustl.edu	37	X	49767767	49767767	+	RNA	SNP	C	C	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	X	49767767	49767767	C	G	SNP	MIR532	ENST00000385025	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR532	HGNC	ENSG00000207758	371	0	0.00	214	54	20.15	-	-	-
MLYCD	0	genome.wustl.edu	37	16	83940597	83940597	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	16	83940597	83940597	G	A	SNP	MLYCD	ENST00000262430	human	ensembl	69_37n	+1	known	missense	c.534	p.M178I	1.000	pfam_Malonyl_CoA_deC	pfam_Malonyl_CoA_deC	-	no_errors	MLYCD	HGNC	ENSG00000103150	115	0	0.00	152	26	14.53	-	-	-
MUC16	0	genome.wustl.edu	37	19	9056288	9056288	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	19	9056288	9056288	G	C	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.31158	p.S10386R	0.000	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	112	0	0.00	102	34	24.82	-	-	-
MYCBPAP	0	genome.wustl.edu	37	17	48595031	48595031	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	17	48595031	48595031	G	C	SNP	MYCBPAP	ENST00000323776	human	ensembl	69_37n	+1	known	missense	c.569	p.R190T	1.000	NULL	NULL	-	no_errors	MYCBPAP	HGNC	ENSG00000136449	37	0	0.00	28	9	24.32	-	-	-
NBPF11	0	genome.wustl.edu	37	1	146055394	146055394	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	146055394	146055394	A	G	SNP	NBPF11	ENST00000339388	human	ensembl	69_37n	-1	known	missense	c.229	p.F77L	0.002	NULL	pfam_NBPF_dom,superfamily_Secretoglobin	-	no_errors	NBPF11	HGNC	ENSG00000152042	34	0	0.00	18	4	18.18	-	-	-
NKX3-2	0	genome.wustl.edu	37	4	13543811	13543811	+	Silent	SNP	G	G	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	4	13543811	13543811	G	A	SNP	NKX3-2	ENST00000382438	human	ensembl	69_37n	-1	known	silent	c.808	p.L270	1.000	superfamily_Homeodomain-like	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	NKX3-2	HGNC	ENSG00000109705	28	0	0.00	21	10	32.26	-	-	-
NOTCH2	0	genome.wustl.edu	37	1	120529653	120529653	+	Missense_Mutation	SNP	C	C	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	120529653	120529653	C	A	SNP	NOTCH2	ENST00000256646	human	ensembl	69_37n	-1	known	missense	c.804	p.R268S	1.000	pirsf_Notch,pfam_EGF-like_dom,pfam_EGF_extracell,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	pirsf_Notch,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250	313	0	0.00	272	61	18.32	-	-	-
OR6T1	0	genome.wustl.edu	37	11	123814154	123814154	+	Missense_Mutation	SNP	C	C	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	11	123814154	123814154	C	A	SNP	OR6T1	ENST00000321252	human	ensembl	69_37n	-1	known	missense	c.392	p.R131L	0.994	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR6T1	HGNC	ENSG00000181499	104	0	0.00	47	29	38.16	-	-	-
PAPOLG	0	genome.wustl.edu	37	2	61021858	61021858	+	Missense_Mutation	SNP	A	A	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	61021858	61021858	A	T	SNP	PAPOLG	ENST00000238714	human	ensembl	69_37n	+1	known	missense	c.2003	p.E668V	1.000	NULL	pfam_PolA_pol_cen_dom,pfam_PolA_pol_RNA-bd_dom,pfam_Nucleotidyltransferase,superfamily_NuclTrfase_I_C,pirsf_PolyA_polymerase	-	no_errors	PAPOLG	HGNC	ENSG00000115421	81	0	0.00	52	9	14.75	-	-	-
PCDHB10	0	genome.wustl.edu	37	5	140574045	140574045	+	Silent	SNP	C	C	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	5	140574045	140574045	C	G	SNP	PCDHB10	ENST00000239446	human	ensembl	69_37n	+1	known	silent	c.1920	p.L640	0.002	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB10	HGNC	ENSG00000120324	11	0	0.00	5	4	44.44	-	-	-
PFKFB4	0	genome.wustl.edu	37	3	48573805	48573805	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	3	48573805	48573805	G	-	DEL	PFKFB4	ENST00000232375	human	ensembl	69_37n	-1	known	frame_shift_del	c.724	p.L242fs	1.000	pfam_6Phosfructo_kin,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB4	HGNC	ENSG00000114268	218	0	0.00	125	603	81.82	-	-	-
PITX2	0	genome.wustl.edu	37	4	111539646	111539646	+	Missense_Mutation	SNP	A	A	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	4	111539646	111539646	A	C	SNP	PITX2	ENST00000306732	human	ensembl	69_37n	-1	known	missense	c.610	p.F204V	1.000	pirsf_Homeobox_Pitx/unc30	pfam_Homeodomain,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeodomain,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeodomain	-	no_errors	PITX2	HGNC	ENSG00000164093	158	0	0.00	108	28	20.44	-	-	-
PMS2	0	genome.wustl.edu	37	7	6038878	6038878	+	Missense_Mutation	SNP	T	T	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	6038878	6038878	T	G	SNP	PMS2	ENST00000265849	human	ensembl	69_37n	-1	known	missense	c.566	p.H189P	0.998	superfamily_ATPase-like_ATP-bd,tigrfam_DNA_mismatch_repair_N	pfam_MutL_C,pfam_DNA_mismatch_repair_C,pfam_ATPase-like_ATP-bd,superfamily_ATPase-like_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_MutL_C,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS2	HGNC	ENSG00000122512	130	0	0.00	128	28	17.95	-	-	-
PREPL	0	genome.wustl.edu	37	2	44549012	44549012	+	Missense_Mutation	SNP	T	T	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	44549012	44549012	T	A	SNP	PREPL	ENST00000260648	human	ensembl	69_37n	-1	known	missense	c.2048	p.D683V	1.000	pfam_Peptidase_S9	pfam_Peptidase_S9,pfam_Peptidase_S9A_B_C_N,superfamily_Peptidase_S9A_B_C_N,prints_Peptidase_S9A	-	no_errors	PREPL	HGNC	ENSG00000138078	159	0	0.00	72	35	32.71	-	-	-
PVRIG	0	genome.wustl.edu	37	7	99818791	99818791	+	Missense_Mutation	SNP	C	C	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	99818791	99818791	C	A	SNP	PVRIG	ENST00000317271	human	ensembl	69_37n	+1	known	missense	c.898	p.P300T	0.008	NULL	NULL	-	no_errors	PVRIG	HGNC	ENSG00000213413	84	0	0.00	41	10	19.61	-	-	-
RAB20	0	genome.wustl.edu	37	13	111176499	111176500	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	13	111176499	111176500	-	C	INS	RAB20	ENST00000267328	human	ensembl	69_37n	-1	known	frame_shift_ins	c.218_217	p.A73fs	1.000:1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB20	HGNC	ENSG00000139832	34	0	0.00	18	3	14.29	-	-	-
RTN4	0	genome.wustl.edu	37	2	55209715	55209715	+	Missense_Mutation	SNP	A	A	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	55209715	55209715	A	C	SNP	RTN4	ENST00000337526	human	ensembl	69_37n	-1	known	missense	c.3296	p.V1099G	1.000	pfam_Reticulon,pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN4	HGNC	ENSG00000115310	91	0	0.00	52	16	23.53	-	-	-
SELRC1	0	genome.wustl.edu	37	1	53153417	53153417	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	1	53153417	53153417	C	G	SNP	SELRC1	ENST00000371538	human	ensembl	69_37n	-1	known	missense	c.671	p.G224A	0.001	NULL	pfam_Sel1-like,smart_Sel1-like	-	no_errors	SELRC1	HGNC	ENSG00000162377	192	0	0.00	130	16	10.96	-	-	-
SEPT10	0	genome.wustl.edu	37	2	110343411	110343411	+	Missense_Mutation	SNP	C	C	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	110343411	110343411	C	A	SNP	SEPT10	ENST00000397712	human	ensembl	69_37n	-1	known	missense	c.104	p.R35I	0.222	NULL	pfam_Cell_div_GTP-bd,pirsf_Septin	-	no_errors	SEPT10	HGNC	ENSG00000186522	189	0	0.00	152	45	22.84	-	-	-
SETD2	0	genome.wustl.edu	37	3	47164390	47164390	+	Missense_Mutation	SNP	T	T	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	3	47164390	47164390	T	C	SNP	SETD2	ENST00000409792	human	ensembl	69_37n	-1	known	missense	c.1736	p.N579S	0.980	NULL	pfam_SRI,pfam_SET_dom,pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,superfamily_Ferritin/RR-like,smart_AWS,smart_SET_dom,smart_Post-SET_dom,smart_WW_Rsp5_WWP,pfscan_AWS,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_WW_Rsp5_WWP	-	no_errors	SETD2	HGNC	ENSG00000181555	28	0	0.00	10	9	47.37	-	-	-
SHC4	0	genome.wustl.edu	37	15	49148280	49148282	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	15	49148280	49148282	TCT	-	DEL	SHC4	ENST00000332408	human	ensembl	69_37n	-1	known	in_frame_del	c.1112_1110	p.E370in_frame_del	0.999:1.000:1.000	NULL	pfam_PTyr_interaction_dom,pfam_SH2,smart_PTyr_interaction_dom,smart_SH2,prints_PID_domain,prints_SH2,pfscan_PTyr_interaction_dom,pfscan_SH2	-	no_errors	SHC4	HGNC	ENSG00000185634	209	0	0.00	176	21	10.61	-	-	-
SLC4A4	0	genome.wustl.edu	37	4	72316952	72316953	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	4	72316952	72316953	-	A	INS	SLC4A4	ENST00000425175	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1256_1257	p.P420fs	0.996:0.391	tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_HCO3_transpt_cyt,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A4	HGNC	ENSG00000080493	184	0	0.00	165	33	16.67	-	-	-
SLC4A4	0	genome.wustl.edu	37	4	72316953	72316953	+	Silent	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	4	72316953	72316953	G	C	SNP	SLC4A4	ENST00000425175	human	ensembl	69_37n	+1	known	silent	c.1257	p.T419	0.391	tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_HCO3_transpt_cyt,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A4	HGNC	ENSG00000080493	190	0	0.00	163	33	16.42	-	-	-
SRCAP	0	genome.wustl.edu	37	16	30722922	30722922	+	Missense_Mutation	SNP	A	A	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	16	30722922	30722922	A	T	SNP	SRCAP	ENST00000262518	human	ensembl	69_37n	+1	known	missense	c.1349	p.Q450L	1.000	NULL	pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603	248	0	0.00	294	43	12.72	-	-	-
SUPT6H	0	genome.wustl.edu	37	17	27001581	27001581	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	17	27001581	27001581	G	A	SNP	SUPT6H	ENST00000314616	human	ensembl	69_37n	+1	known	missense	c.295	p.D99N	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold-like,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111	357	0	0.00	312	107	25.54	-	-	-
TARS	0	genome.wustl.edu	37	5	33461087	33461087	+	Missense_Mutation	SNP	A	A	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	5	33461087	33461087	A	C	SNP	TARS	ENST00000265112	human	ensembl	69_37n	+1	known	missense	c.1331	p.E444A	1.000	pfam_aa-tRNA-synt_IIb_cons-dom,prints_Thr-tRNA-synth_IIa,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-synth_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,prints_Thr-tRNA-synth_IIa,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-synth_IIa	-	no_errors	TARS	HGNC	ENSG00000113407	126	0	0.00	58	20	25.64	-	-	-
TECTA	0	genome.wustl.edu	37	11	121060518	121060518	+	Missense_Mutation	SNP	C	C	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	11	121060518	121060518	C	A	SNP	TECTA	ENST00000264037	human	ensembl	69_37n	+1	known	missense	c.6296	p.T2099K	1.000	smart_EGF-like	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_Zona_pellucida_Endoglin/CD105,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105	-	no_errors	TECTA	HGNC	ENSG00000109927	479	0	0.00	239	27	10.15	-	-	-
TRIM72	0	genome.wustl.edu	37	16	31230728	31230728	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	16	31230728	31230728	G	A	SNP	TRIM72	ENST00000322122	human	ensembl	69_37n	+1	known	missense	c.605	p.G202E	0.241	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM72	HGNC	ENSG00000177238	32	0	0.00	59	26	30.59	-	-	-
TRIML1	0	genome.wustl.edu	37	4	189068235	189068235	+	Silent	SNP	T	T	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	4	189068235	189068235	T	A	SNP	TRIML1	ENST00000332517	human	ensembl	69_37n	+1	known	silent	c.1116	p.P372	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIML1	HGNC	ENSG00000184108	26	0	0.00	90	20	18.18	-	-	-
TTN	0	genome.wustl.edu	37	2	179471808	179471808	+	Missense_Mutation	SNP	T	T	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	179471808	179471808	T	C	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.45817	p.N15273D	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	324	0	0.00	254	87	25.51	-	-	-
TTN	0	genome.wustl.edu	37	2	179605674	179605674	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	179605674	179605674	G	-	DEL	TTN	ENST00000342175	human	ensembl	69_37n	-1	known	frame_shift_del	c.11773	p.H3925fs	0.116	superfamily_RNaseH-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	129	0	0.00	145	31	17.51	-	-	-
URGCP	0	genome.wustl.edu	37	7	43917712	43917712	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	43917712	43917712	G	T	SNP	URGCP	ENST00000453200	human	ensembl	69_37n	-1	known	missense	c.1350	p.D450E	0.948	NULL	prints_GTP_binding_domain	-	no_errors	URGCP	HGNC	ENSG00000106608	94	0	0.00	52	9	14.75	-	-	-
USP37	0	genome.wustl.edu	37	2	219410972	219410972	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	219410972	219410972	C	G	SNP	USP37	ENST00000258399	human	ensembl	69_37n	-1	known	missense	c.652	p.D218H	1.000	NULL	pfam_Peptidase_C19,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Peptidase_C19	-	no_errors	USP37	HGNC	ENSG00000135913	225	0	0.00	176	42	19.27	-	-	-
VPS13A	0	genome.wustl.edu	37	9	80020881	80020881	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	9	80020881	80020881	G	A	SNP	VPS13A	ENST00000360280	human	ensembl	69_37n	+1	known	missense	c.9377	p.R3126K	1.000	NULL	pfam_VPSAP,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969	365	0	0.00	229	76	24.92	-	-	-
VPS37A	0	genome.wustl.edu	37	8	17137583	17137583	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	8	17137583	17137583	G	T	SNP	VPS37A	ENST00000324849	human	ensembl	69_37n	+1	known	nonsense	c.760	p.E254*	1.000	pfam_Mod_r	pfam_Mod_r,superfamily_UBQ-conjugating_enzyme/RWD	-	no_errors	VPS37A	HGNC	ENSG00000155975	84	0	0.00	45	13	22.03	-	-	-
YLPM1	0	genome.wustl.edu	37	14	75247126	75247126	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	14	75247126	75247126	G	C	SNP	YLPM1	ENST00000325680	human	ensembl	69_37n	+1	known	missense	c.1129	p.D377H	1.000	NULL	superfamily_FH2_actin-bd	-	no_errors	YLPM1	HGNC	ENSG00000119596	300	0	0.00	142	33	18.86	-	-	-
ZNF142	0	genome.wustl.edu	37	2	219509198	219509199	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	2	219509198	219509199	-	G	INS	ZNF142	ENST00000411696	human	ensembl	69_37n	-1	known	frame_shift_ins	c.2041_2040	p.G680fs	0.065:0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568	45	0	0.00	23	14	37.84	-	-	-
ZNF438	0	genome.wustl.edu	37	10	31134261	31134261	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	10	31134261	31134261	C	G	SNP	ZNF438	ENST00000361310	human	ensembl	69_37n	-1	known	missense	c.2116	p.E706Q	0.970	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF438	HGNC	ENSG00000183621	83	0	0.00	34	10	22.73	-	-	-
ZNF485	0	genome.wustl.edu	37	10	44111988	44111988	+	Missense_Mutation	SNP	C	C	A			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	10	44111988	44111988	C	A	SNP	ZNF485	ENST00000361807	human	ensembl	69_37n	+1	known	missense	c.497	p.A166D	0.002	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF485	HGNC	ENSG00000198298	123	0	0.00	76	34	30.91	-	-	-
ZNF646	0	genome.wustl.edu	37	16	31087657	31087658	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	16	31087657	31087658	-	C	INS	ZNF646	ENST00000300850	human	ensembl	69_37n	+1	known	frame_shift_ins	c.12_13	p.S6fs	0.000:0.235	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395	31	0	0.00	23	3	11.54	-	-	-
ZNF777	0	genome.wustl.edu	37	7	149152291	149152292	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	cbea866d-da66-4f7c-994b-c1ec35aa2d4b	467c3965-5537-4c89-a3f0-ba3eca9854b4	7	149152291	149152292	-	G	INS	ZNF777	ENST00000247930	human	ensembl	69_37n	-1	known	frame_shift_ins	c.823_822	p.G274fs	0.979:0.003	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF777	HGNC	ENSG00000196453	19	0	0.00	27	4	12.90	-	-	-
