Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA4	0	genome.wustl.edu	37	1	94520758	94520758	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	94520758	94520758	G	C	SNP	ABCA4	ENST00000370225	human	ensembl	69_37n	-1	known	missense	c.2496	p.D832E	0.996	tigrfam_Rim_ABC_transpt	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Rim_ABC_transpt	-	no_errors	ABCA4	HGNC	ENSG00000198691	69	0	0.00	24	12	33.33	-	-	-
ABCB1	0	genome.wustl.edu	37	7	87179797	87179797	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	7	87179797	87179797	C	T	SNP	ABCB1	ENST00000265724	human	ensembl	69_37n	-1	known	missense	c.1211	p.R404Q	1.000	pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB1	HGNC	ENSG00000085563	54	0	0.00	44	16	26.67	-	-	-
ABCD4	0	genome.wustl.edu	37	14	74766252	74766252	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	14	74766252	74766252	G	C	SNP	ABCD4	ENST00000356924	human	ensembl	69_37n	-1	known	missense	c.284	p.T95R	1.000	pfam_ABC_Ald_N,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1	pfam_ABC_Ald_N,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCD4	HGNC	ENSG00000119688	51	0	0.00	6	31	83.78	-	-	-
ACAP2	0	genome.wustl.edu	37	3	195063301	195063301	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	3	195063301	195063301	G	-	DEL	ACAP2	ENST00000326793	human	ensembl	69_37n	-1	known	frame_shift_del	c.427	p.Q143fs	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP2	HGNC	ENSG00000114331	93	0	0.00	74	43	36.75	-	-	-
ACVR2A	0	genome.wustl.edu	37	2	148684693	148684693	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	2	148684693	148684693	C	G	SNP	ACVR2A	ENST00000241416	human	ensembl	69_37n	+1	known	missense	c.1392	p.H464Q	0.870	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Activin_II/TGFBeta-II_recpt	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Activin_II/TGFBeta-II_recpt	-	no_errors	ACVR2A	HGNC	ENSG00000121989	60	0	0.00	17	26	60.47	-	-	-
ADAM23	0	genome.wustl.edu	37	2	207432046	207432046	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	2	207432046	207432046	G	T	SNP	ADAM23	ENST00000264377	human	ensembl	69_37n	+1	known	missense	c.1494	p.K498N	1.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM23	HGNC	ENSG00000114948	40	0	0.00	35	4	10.26	-	-	-
ADAMTS2	0	genome.wustl.edu	37	5	178549720	178549720	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	5	178549720	178549720	C	T	SNP	ADAMTS2	ENST00000251582	human	ensembl	69_37n	-1	known	missense	c.3013	p.A1005T	0.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Pept_M12B_ADAM-TS2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS2	HGNC	ENSG00000087116	51	0	0.00	4	12	75.00	-	-	-
ADRA1A	0	genome.wustl.edu	37	8	26722331	26722331	+	Silent	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	8	26722331	26722331	G	T	SNP	ADRA1A	ENST00000380586	human	ensembl	69_37n	-1	known	silent	c.156	p.A52	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Adrene_rcpt_A1Cs,prints_7TM_GPCR_Rhodpsn,prints_Adrnrgc_rcpt	-	no_errors	ADRA1A	HGNC	ENSG00000120907	50	0	0.00	22	22	50.00	-	-	-
ANKRD12	0	genome.wustl.edu	37	18	9182463	9182463	+	Silent	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	18	9182463	9182463	G	A	SNP	ANKRD12	ENST00000262126	human	ensembl	69_37n	+1	known	silent	c.33	p.Q11	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD12	HGNC	ENSG00000101745	38	0	0.00	23	14	37.84	-	-	-
ANKRD35	0	genome.wustl.edu	37	1	145562187	145562187	+	Missense_Mutation	SNP	T	T	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	145562187	145562187	T	A	SNP	ANKRD35	ENST00000355594	human	ensembl	69_37n	+1	known	missense	c.1875	p.S625R	0.984	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD35	HGNC	ENSG00000198483	47	0	0.00	74	16	17.78	-	-	-
BCOR	0	genome.wustl.edu	37	X	39922163	39922163	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	X	39922163	39922163	C	A	SNP	BCOR	ENST00000378444	human	ensembl	69_37n	-1	known	nonsense	c.4009	p.E1337*	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337	164	0	0.00	67	87	56.49	-	-	-
C10orf118	0	genome.wustl.edu	37	10	115887422	115887422	+	Missense_Mutation	SNP	T	T	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	10	115887422	115887422	T	A	SNP	C10orf118	ENST00000369287	human	ensembl	69_37n	-1	known	missense	c.2191	p.N731Y	1.000	NULL	superfamily_Prefoldin	-	no_errors	C10orf118	HGNC	ENSG00000165813	26	0	0.00	46	12	20.69	-	-	-
C16orf95	0	genome.wustl.edu	37	16	87350773	87350773	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	16	87350773	87350773	C	A	SNP	C16orf95	ENST00000567970	human	ensembl	69_37n	-1	known	missense	c.76	p.A26S	0.001	NULL	NULL	-	no_errors	C16orf95	Clone_based_vega_gene	ENSG00000260456	114	0	0.00	43	5	10.42	-	-	-
C17orf62	0	genome.wustl.edu	37	17	80401650	80401650	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	17	80401650	80401650	C	T	SNP	C17orf62	ENST00000336995	human	ensembl	69_37n	-1	known	missense	c.349	p.D117N	0.000	NULL	NULL	-	no_errors	C17orf62	HGNC	ENSG00000178927	103	0	0.00	27	4	12.90	-	-	-
C20orf112	0	genome.wustl.edu	37	20	31040091	31040091	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	20	31040091	31040091	C	G	SNP	C20orf112	ENST00000359676	human	ensembl	69_37n	-1	known	missense	c.1038	p.L346F	1.000	NULL	NULL	-	no_errors	C20orf112	HGNC	ENSG00000197183	88	0	0.00	46	8	14.81	-	-	-
C3orf49	0	genome.wustl.edu	37	3	63817430	63817430	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	3	63817430	63817430	G	C	SNP	C3orf49	ENST00000295896	human	ensembl	69_37n	+1	known	missense	c.759	p.Q253H	1.000	NULL	NULL	-	no_errors	C3orf49	HGNC	ENSG00000163632	56	0	0.00	27	4	12.90	-	-	-
C5orf42	0	genome.wustl.edu	37	5	37142576	37142576	+	Missense_Mutation	SNP	A	A	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	5	37142576	37142576	A	C	SNP	C5orf42	ENST00000425232	human	ensembl	69_37n	-1	known	missense	c.8306	p.F2769C	0.002	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603	18	0	0.00	17	6	26.09	-	-	-
C9orf84	0	genome.wustl.edu	37	9	114543270	114543270	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	9	114543270	114543270	G	T	SNP	C9orf84	ENST00000318737	human	ensembl	69_37n	-1	known	missense	c.5	p.T2K	0.004	NULL	superfamily_RuvA_2-like	-	no_errors	C9orf84	HGNC	ENSG00000165181	37	0	0.00	20	3	13.04	-	-	-
CALCOCO1	0	genome.wustl.edu	37	12	54109767	54109767	+	Missense_Mutation	SNP	T	T	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	12	54109767	54109767	T	G	SNP	CALCOCO1	ENST00000550804	human	ensembl	69_37n	-1	known	missense	c.1070	p.Q357P	1.000	pfam_CoCoA	pfam_CoCoA	-	no_errors	CALCOCO1	HGNC	ENSG00000012822	66	0	0.00	54	9	14.29	-	-	-
CCDC74A	0	genome.wustl.edu	37	2	132285769	132285769	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	2	132285769	132285769	G	C	SNP	CCDC74A	ENST00000295171	human	ensembl	69_37n	+1	known	missense	c.226	p.E76Q	0.995	NULL	NULL	-	no_errors	CCDC74A	HGNC	ENSG00000163040	72	0	0.00	26	30	53.57	-	-	-
CD6	0	genome.wustl.edu	37	11	60776307	60776307	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	11	60776307	60776307	G	C	SNP	CD6	ENST00000538611	human	ensembl	69_37n	+1	novel	missense	c.302	p.R101P	0.023	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt,prints_Srcr_rcpt	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt,prints_Srcr_rcpt	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CD6	HGNC	ENSG00000013725	8	0	0.00	4	5	55.56	-	-	-
CEP78	0	genome.wustl.edu	37	9	80877837	80877837	+	Silent	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	9	80877837	80877837	G	A	SNP	CEP78	ENST00000376597	human	ensembl	69_37n	+1	known	silent	c.1398	p.E466	0.994	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	CEP78	HGNC	ENSG00000148019	53	0	0.00	32	4	11.11	-	-	-
DDOST	0	genome.wustl.edu	37	1	20982252	20982252	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	20982252	20982252	C	T	SNP	DDOST	ENST00000375048	human	ensembl	69_37n	-1	known	missense	c.424	p.G142S	1.000	pfam_OligosaccharylTrfase_su_Wbp1	pfam_OligosaccharylTrfase_su_Wbp1	-	no_errors	DDOST	HGNC	ENSG00000244038	12	0	0.00	8	4	33.33	-	-	-
DDR2	0	genome.wustl.edu	37	1	162724557	162724557	+	Missense_Mutation	SNP	A	A	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	162724557	162724557	A	G	SNP	DDR2	ENST00000367921	human	ensembl	69_37n	+1	known	missense	c.329	p.H110R	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR2	HGNC	ENSG00000162733	37	0	0.00	42	12	21.82	-	-	-
DENND5B	0	genome.wustl.edu	37	12	31595754	31595754	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	12	31595754	31595754	G	T	SNP	DENND5B	ENST00000306833	human	ensembl	69_37n	-1	known	missense	c.2072	p.P691Q	1.000	NULL	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_LipOase_LH2,pfscan_Run	-	no_errors	DENND5B	HGNC	ENSG00000170456	77	0	0.00	62	7	10.14	-	-	-
DGKG	0	genome.wustl.edu	37	3	185882704	185882704	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	3	185882704	185882704	G	T	SNP	DGKG	ENST00000265022	human	ensembl	69_37n	-1	known	nonsense	c.2199	p.C733*	0.998	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKG	HGNC	ENSG00000058866	63	0	0.00	33	26	44.07	-	-	-
DNM1P34	0	genome.wustl.edu	37	15	75592328	75592328	+	RNA	SNP	C	C	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	15	75592328	75592328	C	A	SNP	DNM1P34	ENST00000567292	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	DNM1P34	HGNC	ENSG00000260357	21	0	0.00	12	4	25.00	-	-	-
ESPNP	0	genome.wustl.edu	37	1	17017735	17017735	+	RNA	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	17017735	17017735	G	A	SNP	ESPNP	ENST00000492551	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ESPNP	HGNC	ENSG00000116219	137	0	0.00	82	20	19.61	-	-	-
FAM170B	0	genome.wustl.edu	37	10	50341903	50341903	+	Missense_Mutation	SNP	T	T	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	10	50341903	50341903	T	G	SNP	FAM170B	ENST00000311787	human	ensembl	69_37n	-1	known	missense	c.61	p.S21R	0.006	NULL	NULL	-	no_errors	FAM170B	HGNC	ENSG00000172538	66	0	0.00	61	21	25.61	-	-	-
FAM198A	0	genome.wustl.edu	37	3	43074129	43074129	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	3	43074129	43074129	C	A	SNP	FAM198A	ENST00000273146	human	ensembl	69_37n	+1	known	nonsense	c.374	p.S125*	0.008	NULL	NULL	-	no_errors	FAM198A	HGNC	ENSG00000144649	37	0	0.00	5	19	79.17	-	-	-
FAM3B	0	genome.wustl.edu	37	21	42729116	42729116	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	21	42729116	42729116	C	G	SNP	FAM3B	ENST00000357985	human	ensembl	69_37n	+1	known	missense	c.700	p.R234G	0.000	NULL	NULL	-	no_errors	FAM3B	HGNC	ENSG00000183844	33	0	0.00	20	14	41.18	-	-	-
FBLN2	0	genome.wustl.edu	37	3	13679353	13679353	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	3	13679353	13679353	G	C	SNP	FBLN2	ENST00000404922	human	ensembl	69_37n	+1	known	missense	c.3630	p.W1210C	1.000	NULL	pfam_EGF-like_Ca-bd,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_,smart_EGF-like,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520	28	0	0.00	3	8	72.73	-	-	-
FBXO25	0	genome.wustl.edu	37	8	417720	417720	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	8	417720	417720	G	T	SNP	FBXO25	ENST00000276326	human	ensembl	69_37n	+1	known	missense	c.988	p.D330Y	1.000	superfamily_F-box_dom_cyclin-like	superfamily_F-box_dom_cyclin-like	-	no_errors	FBXO25	HGNC	ENSG00000147364	149	0	0.00	100	22	18.03	-	-	-
FLJ42875	0	genome.wustl.edu	37	1	2983987	2983987	+	RNA	SNP	C	C	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	2983987	2983987	C	A	SNP	FLJ42875	ENST00000321336	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP1-163G9.1	Clone_based_vega_gene	ENSG00000177133	76	0	0.00	28	10	26.32	-	-	-
FMN2	0	genome.wustl.edu	37	1	240370261	240370261	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	240370261	240370261	G	A	SNP	FMN2	ENST00000319653	human	ensembl	69_37n	+1	known	missense	c.2149	p.A717T	0.000	NULL	pfam_FH2_actin-bd,pfam_Formin_homology_1,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	46	0	0.00	42	13	23.64	-	-	-
FPR1	0	genome.wustl.edu	37	19	52249452	52249452	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	19	52249452	52249452	C	T	SNP	FPR1	ENST00000304748	human	ensembl	69_37n	-1	known	missense	c.796	p.V266I	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Frt_met_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Anphylx_rcpt	-	no_errors	FPR1	HGNC	ENSG00000171051	19	0	0.00	8	10	55.56	-	-	-
HCN3	0	genome.wustl.edu	37	1	155255569	155255569	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	155255569	155255569	C	T	SNP	HCN3	ENST00000368358	human	ensembl	69_37n	+1	known	missense	c.1291	p.H431Y	1.000	superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_Ion_trans_N,pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN3	HGNC	ENSG00000143630	39	0	0.00	48	21	30.43	-	-	-
HECTD2	0	genome.wustl.edu	37	10	93240885	93240885	+	Missense_Mutation	SNP	A	A	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	10	93240885	93240885	A	T	SNP	HECTD2	ENST00000446394	human	ensembl	69_37n	+1	known	missense	c.700	p.I234L	1.000	NULL	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	-	no_errors	HECTD2	HGNC	ENSG00000165338	23	0	0.00	20	10	33.33	-	-	-
HGD	0	genome.wustl.edu	37	3	120347346	120347346	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	3	120347346	120347346	C	A	SNP	HGD	ENST00000283871	human	ensembl	69_37n	-1	known	missense	c.1219	p.A407S	1.000	pfam_Homogentis_dOase,superfamily_RmlC_Cupin,tigrfam_Homogentis_dOase	pfam_Homogentis_dOase,superfamily_RmlC_Cupin,tigrfam_Homogentis_dOase	-	no_errors	HGD	HGNC	ENSG00000113924	55	0	0.00	32	34	51.52	-	-	-
IARS2	0	genome.wustl.edu	37	1	220275717	220275717	+	Silent	SNP	C	C	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	220275717	220275717	C	A	SNP	IARS2	ENST00000302637	human	ensembl	69_37n	+1	known	silent	c.712	p.R238	1.000	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Ile-tRNA-synt	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_Znf_DNA_glyclase/IsotRNA_synth,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,prints_Ile-tRNA-synt,tigrfam_Ile-tRNA-synt	-	no_errors	IARS2	HGNC	ENSG00000067704	38	0	0.00	36	12	25.00	-	-	-
IFNK	0	genome.wustl.edu	37	9	27524538	27524538	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	9	27524538	27524538	G	T	SNP	IFNK	ENST00000276943	human	ensembl	69_37n	+1	known	missense	c.204	p.L68F	0.369	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNK	HGNC	ENSG00000147896	60	0	0.00	29	34	53.97	-	-	-
IGHV3-33	0	genome.wustl.edu	37	14	106815740	106815740	+	Silent	SNP	A	A	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	14	106815740	106815740	A	G	SNP	IGHV3-33	ENST00000390615	human	ensembl	69_37n	-1	known	silent	c.333	p.A111	0.678	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV3-33	HGNC	ENSG00000211955	60	0	0.00	10	3	23.08	-	-	-
KDM6B	0	genome.wustl.edu	37	17	7750324	7750324	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	17	7750324	7750324	C	T	SNP	KDM6B	ENST00000254846	human	ensembl	69_37n	+1	known	missense	c.899	p.P300L	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM6B	HGNC	ENSG00000132510	34	0	0.00	19	26	57.78	-	-	-
KLK12	0	genome.wustl.edu	37	19	51537845	51537845	+	Silent	SNP	A	A	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	19	51537845	51537845	A	G	SNP	KLK12	ENST00000250351	human	ensembl	69_37n	-1	known	silent	c.33	p.V11	0.000	superfamily_Pept_cys/ser_Trypsin-like	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Peptidase_S1_S6	-	no_errors	KLK12	HGNC	ENSG00000186474	36	0	0.00	24	21	46.67	-	-	-
LRP1	0	genome.wustl.edu	37	12	57552402	57552402	+	Silent	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	12	57552402	57552402	G	T	SNP	LRP1	ENST00000243077	human	ensembl	69_37n	+1	known	silent	c.1779	p.R593	0.999	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	29	0	0.00	13	19	59.38	-	-	-
LRRC55	0	genome.wustl.edu	37	11	56949607	56949607	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	11	56949607	56949607	C	G	SNP	LRRC55	ENST00000497933	human	ensembl	69_37n	+1	known	missense	c.240	p.S80R	1.000	smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC55	HGNC	ENSG00000183908	110	0	0.00	42	22	34.38	-	-	-
MACF1	0	genome.wustl.edu	37	1	39851166	39851166	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	39851166	39851166	C	T	SNP	MACF1	ENST00000317713	human	ensembl	69_37n	+1	known	nonsense	c.7723	p.Q2575*	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	MACF1	HGNC	ENSG00000127603	44	0	0.00	36	9	20.00	-	-	-
MYH7B	0	genome.wustl.edu	37	20	33583233	33583233	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	20	33583233	33583233	G	C	SNP	MYH7B	ENST00000262873	human	ensembl	69_37n	+1	novel	missense	c.2921	p.R974P	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814	79	0	0.00	20	28	58.33	-	-	-
NOTCH3	0	genome.wustl.edu	37	19	15271746	15271747	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	19	15271746	15271747	-	G	INS	NOTCH3	ENST00000263388	human	ensembl	69_37n	-1	known	frame_shift_ins	c.6693_6692	p.A2233fs	0.009:0.128	pfam_DUF3454_notch,pirsf_Notch	pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_3,prints_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	20	0	0.00	7	35	83.33	-	-	-
NRXN1	0	genome.wustl.edu	37	2	50723212	50723212	+	Missense_Mutation	SNP	A	A	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	2	50723212	50723212	A	T	SNP	NRXN1	ENST00000402717	human	ensembl	69_37n	-1	known	missense	c.2877	p.D959E	0.996	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	95	0	0.00	32	57	64.04	-	-	-
OCRL	0	genome.wustl.edu	37	X	128724525	128724525	+	RNA	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	X	128724525	128724525	G	A	SNP	OCRL	ENST00000463271	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	OCRL	HGNC	ENSG00000122126	35	0	0.00	21	3	12.50	-	-	-
PARG	0	genome.wustl.edu	37	10	51077584	51077584	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	10	51077584	51077584	G	A	SNP	PARG	ENST00000402038	human	ensembl	69_37n	-1	known	missense	c.551	p.S184L	1.000	pfam_Poly_GlycHdrlase	pfam_Poly_GlycHdrlase	-	no_start_codon	PARG	HGNC	ENSG00000227345	277	0	0.00	208	179	46.25	-	-	-
PARP10	0	genome.wustl.edu	37	8	145057586	145057586	+	Missense_Mutation	SNP	C	C	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	8	145057586	145057586	C	A	SNP	PARP10	ENST00000313028	human	ensembl	69_37n	-1	known	missense	c.2171	p.R724L	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP10	HGNC	ENSG00000178685	62	0	0.00	5	21	80.77	-	-	-
PCNT	0	genome.wustl.edu	37	21	47783734	47783734	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	21	47783734	47783734	G	A	SNP	PCNT	ENST00000359568	human	ensembl	69_37n	+1	known	missense	c.2494	p.D832N	0.084	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	52	0	0.00	11	14	56.00	-	-	-
PGGT1B	0	genome.wustl.edu	37	5	114573581	114573581	+	Missense_Mutation	SNP	C	C	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	5	114573581	114573581	C	G	SNP	PGGT1B	ENST00000419445	human	ensembl	69_37n	-1	known	missense	c.453	p.L151F	1.000	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	PGGT1B	HGNC	ENSG00000164219	47	0	0.00	4	18	81.82	-	-	-
PIBF1	0	genome.wustl.edu	37	13	73409505	73409506	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	13	73409505	73409506	-	G	INS	PIBF1	ENST00000326291	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1222_1223	p.N409fs	1.000:1.000	NULL	superfamily_t-SNARE	-	no_errors	PIBF1	HGNC	ENSG00000083535	29	0	0.00	16	3	15.79	-	-	-
PLEKHM1	0	genome.wustl.edu	37	17	43517503	43517503	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	17	43517503	43517503	G	A	SNP	PLEKHM1	ENST00000590991	human	ensembl	69_37n	-1	known	missense	c.128	p.P43L	0.000	NULL	NULL	-	no_errors	PLEKHM1	HGNC	ENSG00000225190	54	0	0.00	7	3	30.00	-	-	-
PLXNB2	0	genome.wustl.edu	37	22	50721794	50721794	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	22	50721794	50721794	G	A	SNP	PLXNB2	ENST00000359337	human	ensembl	69_37n	-1	known	missense	c.2651	p.S884L	0.014	pfam_IPT_TIG_rcpt,superfamily_Ig_E-set,smart_IPT_TIG_rcpt	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Semaphorin/CD100_Ag,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNB2	HGNC	ENSG00000196576	85	0	0.00	8	37	82.22	-	-	-
PPP1R10	0	genome.wustl.edu	37	6	30569978	30569978	+	Silent	SNP	A	A	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	6	30569978	30569978	A	G	SNP	PPP1R10	ENST00000376511	human	ensembl	69_37n	-1	known	silent	c.2448	p.H816	0.954	NULL	pfam_TFIIS_N,pfam_Znf_CCCH,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_Znf_CCCH	-	no_errors	PPP1R10	HGNC	ENSG00000204569	87	0	0.00	42	13	23.64	-	-	-
RGPD4	0	genome.wustl.edu	37	2	108473239	108473239	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	2	108473239	108473239	C	T	SNP	RGPD4	ENST00000354986	human	ensembl	69_37n	+1	known	missense	c.1090	p.R364C	1.000	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR-1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862	9	0	0.00	4	3	42.86	-	-	-
RNF123	0	genome.wustl.edu	37	3	49737699	49737699	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	3	49737699	49737699	T	-	DEL	RNF123	ENST00000327697	human	ensembl	69_37n	+1	known	frame_shift_del	c.1024	p.L342fs	1.000	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,smart_Znf_RING,pfscan_B30.2/SPRY,pfscan_Znf_RING	-	no_errors	RNF123	HGNC	ENSG00000164068	109	0	0.00	8	39	81.25	-	-	-
SDHAP2	0	genome.wustl.edu	37	3	195411037	195411037	+	RNA	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	3	195411037	195411037	G	A	SNP	SDHAP2	ENST00000445430	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	SDHAP2	HGNC	ENSG00000215837	9	0	0.00	13	4	23.53	-	-	-
SERPINB11	0	genome.wustl.edu	37	18	61383310	61383310	+	Silent	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	18	61383310	61383310	G	A	SNP	SERPINB11	ENST00000382749	human	ensembl	69_37n	+1	known	silent	c.399	p.L133	0.532	NULL	NULL	-	pseudogene	SERPINB11	HGNC	ENSG00000206072	50	0	0.00	28	4	12.50	-	-	-
SERTAD2	0	genome.wustl.edu	37	2	64863944	64863944	+	Missense_Mutation	SNP	A	A	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	2	64863944	64863944	A	G	SNP	SERTAD2	ENST00000313349	human	ensembl	69_37n	-1	known	missense	c.62	p.I21T	1.000	NULL	pfam_SERTA,pfscan_SERTA	-	no_errors	SERTAD2	HGNC	ENSG00000179833	48	0	0.00	30	6	16.67	-	-	-
SGIP1	0	genome.wustl.edu	37	1	67099831	67099831	+	Silent	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	67099831	67099831	G	C	SNP	SGIP1	ENST00000237247	human	ensembl	69_37n	+1	known	silent	c.168	p.S56	0.999	NULL	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473	44	0	0.00	32	7	17.95	-	-	-
SHMT2	0	genome.wustl.edu	37	12	57628071	57628071	+	Missense_Mutation	SNP	G	G	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	12	57628071	57628071	G	T	SNP	SHMT2	ENST00000328923	human	ensembl	69_37n	+1	known	missense	c.1442	p.R481L	0.918	superfamily_PyrdxlP-dep_Trfase_major_dom,pirsf_Ser_HO-MeTrfase	pfam_Ser_HO-MeTrfase,superfamily_PyrdxlP-dep_Trfase_major_dom,pirsf_Ser_HO-MeTrfase	-	no_errors	SHMT2	HGNC	ENSG00000182199	42	0	0.00	6	21	77.78	-	-	-
SKIV2L2	0	genome.wustl.edu	37	5	54637581	54637581	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	5	54637581	54637581	C	T	SNP	SKIV2L2	ENST00000230640	human	ensembl	69_37n	+1	known	missense	c.763	p.H255Y	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_ATP-bd	pfam_DSH_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SKIV2L2	HGNC	ENSG00000039123	53	0	0.00	35	4	10.26	-	-	-
SYNE4	0	genome.wustl.edu	37	19	36498094	36498094	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	19	36498094	36498094	C	T	SNP	SYNE4	ENST00000324444	human	ensembl	69_37n	-1	known	missense	c.356	p.R119Q	0.967	NULL	pfam_KASH,pfscan_KASH	-	no_errors	SYNE4	HGNC	ENSG00000181392	60	0	0.00	44	27	38.03	-	-	-
TAAR1	0	genome.wustl.edu	37	6	132967074	132967074	+	Silent	SNP	A	A	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	6	132967074	132967074	A	G	SNP	TAAR1	ENST00000275216	human	ensembl	69_37n	-1	known	silent	c.69	p.R23	0.000	prints_Trac_amin_rcpt_1	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Trac_amin_rcpt_1,prints_Trace_amine_rcpt	-	no_errors	TAAR1	HGNC	ENSG00000146399	67	0	0.00	8	29	78.38	-	-	-
TIAM2	0	genome.wustl.edu	37	6	155451207	155451207	+	Missense_Mutation	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	6	155451207	155451207	G	A	SNP	TIAM2	ENST00000456144	human	ensembl	69_37n	+1	known	missense	c.850	p.G284S	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426	67	0	0.00	35	4	10.26	-	-	-
TKTL2	0	genome.wustl.edu	37	4	164394064	164394064	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	4	164394064	164394064	C	T	SNP	TKTL2	ENST00000280605	human	ensembl	69_37n	-1	known	missense	c.823	p.V275I	0.004	NULL	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKTL2	HGNC	ENSG00000151005	27	0	0.00	26	4	13.33	-	-	-
TNRC18	0	genome.wustl.edu	37	7	5364777	5364777	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	7	5364777	5364777	C	T	SNP	TNRC18	ENST00000399537	human	ensembl	69_37n	-1	known	missense	c.6250	p.A2084T	0.021	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095	85	0	0.00	26	20	43.48	-	-	-
TP53	0	genome.wustl.edu	37	17	7577022	7577022	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	17	7577022	7577022	G	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	nonsense	c.916	p.R306*	1.000	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	85	0	0.00	15	82	84.54	-	-	-
TRIL	0	genome.wustl.edu	37	7	28995298	28995298	+	RNA	SNP	C	C	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	7	28995298	28995298	C	G	SNP	TRIL	ENST00000322982	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TRIL	HGNC	ENSG00000176734	55	0	0.00	18	18	50.00	-	-	-
TTC40	0	genome.wustl.edu	37	10	134673963	134673963	+	Missense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	10	134673963	134673963	C	T	SNP	TTC40	ENST00000368586	human	ensembl	69_37n	-1	novel	missense	c.5156	p.R1719Q	0.116	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	54	0	0.00	42	26	38.24	-	-	-
UBQLN2	0	genome.wustl.edu	37	X	56590878	56590878	+	Missense_Mutation	SNP	T	T	G			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	X	56590878	56590878	T	G	SNP	UBQLN2	ENST00000338222	human	ensembl	69_37n	+1	known	missense	c.572	p.V191G	1.000	smart_STI1_HS-bd	pfam_Ubiquitin,pfam_SUMO,pfam_UBA/transl_elong_EF1B_N,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN2	HGNC	ENSG00000188021	27	0	0.00	32	11	25.58	-	-	-
USH2A	0	genome.wustl.edu	37	1	215953193	215953193	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	1	215953193	215953193	G	C	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.10931	p.T3644R	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	38	0	0.00	33	21	38.89	-	-	-
WNK2	0	genome.wustl.edu	37	9	96030076	96030076	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	9	96030076	96030076	C	T	SNP	WNK2	ENST00000297954	human	ensembl	69_37n	+1	known	nonsense	c.3745	p.Q1249*	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	WNK2	HGNC	ENSG00000165238	74	0	0.00	21	4	16.00	-	-	-
XIRP2	0	genome.wustl.edu	37	2	168115459	168115459	+	Silent	SNP	C	C	T			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	2	168115459	168115459	C	T	SNP	XIRP2	ENST00000420519	human	ensembl	69_37n	+1	known	silent	c.2502	p.L834	0.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	XIRP2	HGNC	ENSG00000163092	20	0	0.00	27	8	22.86	-	-	-
ZNF285	0	genome.wustl.edu	37	19	44896528	44896528	+	Missense_Mutation	SNP	T	T	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	19	44896528	44896528	T	A	SNP	ZNF285	ENST00000330997	human	ensembl	69_37n	-1	known	missense	c.118	p.N40Y	1.000	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF285	HGNC	ENSG00000267508	148	0	0.00	89	80	47.34	-	-	-
ZNF705G	0	genome.wustl.edu	37	8	7218752	7218752	+	Missense_Mutation	SNP	G	G	C			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	8	7218752	7218752	G	C	SNP	ZNF705G	ENST00000400078	human	ensembl	69_37n	-1	known	missense	c.19	p.L7V	0.747	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF705G	HGNC	ENSG00000215372	113	0	0.00	147	18	10.91	-	-	-
ZNF733P	0	genome.wustl.edu	37	7	62751948	62751948	+	RNA	SNP	T	T	A			TCGA-AQ-A54N-01A-11D-A25Q-09	TCGA-AQ-A54N-10A-01D-A25Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	292a1557-bc2e-449c-9d24-0ce01b5b2d65	2a07d013-012c-492a-90c2-0fcfe94b1c63	7	62751948	62751948	T	A	SNP	ZNF733P	ENST00000331425	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037	76	0	0.00	58	16	21.62	-	-	-
