Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
A2ML1	0	genome.wustl.edu	37	12	8998791	8998791	+	Silent	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	12	8998791	8998791	C	T	SNP	A2ML1	ENST00000299698	human	ensembl	69_37n	+1	known	silent	c.1656	p.F552	0.669	pfam_A2M_N_2	pfam_A2M_comp,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	A2ML1	HGNC	ENSG00000166535	254	0	0.00	236	94	28.48	-	-	-
ALG11	0	genome.wustl.edu	37	13	52598472	52598472	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	13	52598472	52598472	C	G	SNP	ALG11	ENST00000521508	human	ensembl	69_37n	+1	known	missense	c.606	p.I202M	1.000	NULL	pfam_Glyco_trans_1	-	no_errors	ALG11	HGNC	ENSG00000253710	130	0	0.00	79	65	45.14	-	-	-
APBB2	0	genome.wustl.edu	37	4	41015638	41015638	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	4	41015638	41015638	G	A	SNP	APBB2	ENST00000295974	human	ensembl	69_37n	-1	known	missense	c.797	p.S266F	1.000	NULL	pfam_PTyr_interaction_dom,pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,smart_PTyr_interaction_dom,pfscan_PTyr_interaction_dom,pfscan_WW_Rsp5_WWP	-	no_errors	APBB2	HGNC	ENSG00000163697	146	0	0.00	103	39	27.46	-	-	-
APTX	0	genome.wustl.edu	37	9	32987552	32987552	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	9	32987552	32987552	G	C	SNP	APTX	ENST00000379819	human	ensembl	69_37n	-1	known	missense	c.515	p.P172R	0.006	NULL	pfam_Histidine_triad_HIT,superfamily_HIT-like,superfamily_SMAD_FHA_domain,pfscan_Histidine_triad_HIT	-	no_errors	APTX	HGNC	ENSG00000137074	192	0	0.00	119	38	24.20	-	-	-
ARHGEF39	0	genome.wustl.edu	37	9	35664117	35664117	+	Silent	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	9	35664117	35664117	G	A	SNP	ARHGEF39	ENST00000378387	human	ensembl	69_37n	-1	known	silent	c.361	p.L121	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF39	HGNC	ENSG00000137135	132	0	0.00	118	29	19.73	-	-	-
ATXN2L	0	genome.wustl.edu	37	16	28845927	28845927	+	Silent	SNP	G	G	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	16	28845927	28845927	G	C	SNP	ATXN2L	ENST00000395547	human	ensembl	69_37n	+1	known	silent	c.2346	p.T782	0.674	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2L	HGNC	ENSG00000168488	63	0	0.00	68	9	11.54	-	-	-
C12orf36	0	genome.wustl.edu	37	12	13526168	13526168	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	12	13526168	13526168	T	G	SNP	C12orf36	ENST00000318426	human	ensembl	69_37n	-1	known	missense	c.387	p.Q129H	0.000	NULL	NULL	-	no_errors	C12orf36	HGNC	ENSG00000180861	265	0	0.00	264	99	27.27	-	-	-
CADPS2	0	genome.wustl.edu	37	7	122153323	122153323	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	7	122153323	122153323	G	A	SNP	CADPS2	ENST00000449022	human	ensembl	69_37n	-1	known	missense	c.1522	p.R508C	1.000	pfam_Pleckstrin_homology,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Ca-dep_secretion_activator,pfam_Pleckstrin_homology,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS2	HGNC	ENSG00000081803	161	0	0.00	82	44	34.92	-	-	-
CBLB	0	genome.wustl.edu	37	3	105421211	105421211	+	Silent	SNP	A	A	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	3	105421211	105421211	A	T	SNP	CBLB	ENST00000264122	human	ensembl	69_37n	-1	known	silent	c.1686	p.P562	1.000	NULL	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/transl_elong_EF1B_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBLB	HGNC	ENSG00000114423	134	0	0.00	91	42	31.34	-	-	-
CCDC103	0	genome.wustl.edu	37	17	42978466	42978466	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	17	42978466	42978466	T	A	SNP	CCDC103	ENST00000410006	human	ensembl	69_37n	+1	known	missense	c.100	p.L34I	0.993	NULL	NULL	-	no_errors	CCDC103	HGNC	ENSG00000167131	125	0	0.00	62	30	32.61	-	-	-
CDH23	0	genome.wustl.edu	37	10	73553149	73553149	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	10	73553149	73553149	C	T	SNP	CDH23	ENST00000224721	human	ensembl	69_37n	+1	known	missense	c.6473	p.S2158L	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	33	0	0.00	25	22	46.81	-	-	-
CHEK2	0	genome.wustl.edu	37	22	29115457	29115457	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	22	29115457	29115457	A	C	SNP	CHEK2	ENST00000382580	human	ensembl	69_37n	-1	known	missense	c.738	p.D246E	1.000	superfamily_Kinase-like_dom,superfamily_SMAD_FHA_domain	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_FHA_dom,superfamily_Kinase-like_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FHA_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CHEK2	HGNC	ENSG00000183765	70	0	0.00	72	20	21.74	-	-	-
COL20A1	0	genome.wustl.edu	37	20	61942976	61942976	+	Splice_Site	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	20	61942976	61942976	G	A	SNP	COL20A1	ENST00000326996	human	ensembl	69_37n	+1	known	splice_site	c.1540-1	e12-1	0.999	-	-	-	no_errors	COL20A1	HGNC	ENSG00000101203	25	0	0.00	13	10	43.48	-	-	-
CUL9	0	genome.wustl.edu	37	6	43191035	43191035	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	43191035	43191035	C	T	SNP	CUL9	ENST00000252050	human	ensembl	69_37n	+1	known	missense	c.7184	p.S2395F	0.999	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659	33	0	0.00	17	13	41.94	-	-	-
DENND1A	0	genome.wustl.edu	37	9	126520095	126520095	+	Silent	SNP	T	T	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	9	126520095	126520095	T	A	SNP	DENND1A	ENST00000394219	human	ensembl	69_37n	-1	known	silent	c.93	p.T31	1.000	pfam_uDENN_dom,smart_uDENN_dom,pfscan_uDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1A	HGNC	ENSG00000119522	81	0	0.00	49	29	37.18	-	-	-
DHX16	0	genome.wustl.edu	37	6	30623036	30623036	+	Silent	SNP	A	A	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	30623036	30623036	A	G	SNP	DHX16	ENST00000376442	human	ensembl	69_37n	-1	known	silent	c.2739	p.D913	0.998	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX16	HGNC	ENSG00000204560	76	0	0.00	90	27	23.08	-	-	-
DNAH11	0	genome.wustl.edu	37	7	21639693	21639693	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	7	21639693	21639693	C	G	SNP	DNAH11	ENST00000328843	human	ensembl	69_37n	+1	known	missense	c.2956	p.Q986E	0.991	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877	39	0	0.00	50	20	28.57	-	-	-
DNHD1	0	genome.wustl.edu	37	11	6592506	6592506	+	Silent	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	11	6592506	6592506	C	T	SNP	DNHD1	ENST00000254579	human	ensembl	69_37n	+1	known	silent	c.13764	p.H4588	0.986	pfam_Dynein_heavy	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy,superfamily_t-SNARE	-	no_errors	DNHD1	HGNC	ENSG00000179532	59	0	0.00	28	12	30.00	-	-	-
DPRX	0	genome.wustl.edu	37	19	54139920	54139920	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	19	54139920	54139920	C	-	DEL	DPRX	ENST00000376650	human	ensembl	69_37n	+1	known	frame_shift_del	c.254	p.T85fs	0.000	superfamily_Homeodomain-like	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	DPRX	HGNC	ENSG00000204595	65	0	0.00	64	12	15.38	-	-	-
EPHA2	0	genome.wustl.edu	37	1	16475071	16475071	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	1	16475071	16475071	C	T	SNP	EPHA2	ENST00000358432	human	ensembl	69_37n	-1	known	missense	c.625	p.A209T	1.000	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627	41	0	0.00	23	11	32.35	-	-	-
FAH	0	genome.wustl.edu	37	15	80454634	80454634	+	Silent	SNP	C	C	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	15	80454634	80454634	C	G	SNP	FAH	ENST00000261755	human	ensembl	69_37n	+1	known	silent	c.411	p.V137	0.032	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel,tigrfam_Fumarylacetoacetase	pfam_Fumarylacetoacetase_C,pfam_Fumarylacetoacetase_N,superfamily_Fumarylacetoacetase_C-rel,superfamily_Fumarylacetoacetase_N,tigrfam_Fumarylacetoacetase	-	no_errors	FAH	HGNC	ENSG00000103876	183	0	0.00	177	38	17.67	-	-	-
FHL5	0	genome.wustl.edu	37	6	97051596	97051596	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	97051596	97051596	T	C	SNP	FHL5	ENST00000326771	human	ensembl	69_37n	+1	known	missense	c.107	p.V36A	0.777	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	FHL5	HGNC	ENSG00000112214	131	0	0.00	92	43	31.85	-	-	-
HIVEP3	0	genome.wustl.edu	37	1	41978910	41978910	+	Silent	SNP	G	G	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	1	41978910	41978910	G	C	SNP	HIVEP3	ENST00000247584	human	ensembl	69_37n	-1	known	silent	c.5982	p.P1994	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124	29	0	0.00	18	14	43.75	-	-	-
HSD17B4	0	genome.wustl.edu	37	5	118862855	118862855	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	5	118862855	118862855	G	A	SNP	HSD17B4	ENST00000256216	human	ensembl	69_37n	+1	known	missense	c.1708	p.G570R	1.000	pfam_MaoC_deHydtase	pfam_MaoC_deHydtase,pfam_DH_sc/Rdtase_SDR,pfam_SCP2_sterol-bd_dom,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B4	HGNC	ENSG00000133835	126	0	0.00	67	38	36.19	-	-	-
INTS1	0	genome.wustl.edu	37	7	1525118	1525118	+	Silent	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	7	1525118	1525118	C	T	SNP	INTS1	ENST00000389470	human	ensembl	69_37n	-1	known	silent	c.3450	p.E1150	0.000	NULL	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880	31	0	0.00	18	26	59.09	-	-	-
KIF25	0	genome.wustl.edu	37	6	168439275	168439275	+	Silent	SNP	C	C	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	168439275	168439275	C	G	SNP	KIF25	ENST00000354419	human	ensembl	69_37n	+1	known	silent	c.360	p.V120	0.444	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF25	HGNC	ENSG00000125337	145	0	0.00	51	83	61.94	-	-	-
KLHL13	0	genome.wustl.edu	37	X	117033310	117033310	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	X	117033310	117033310	G	C	SNP	KLHL13	ENST00000539496	human	ensembl	69_37n	-1	known	missense	c.1538	p.P513R	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL13	HGNC	ENSG00000003096	143	0	0.00	119	45	27.44	-	-	-
KLHL23	0	genome.wustl.edu	37	2	170592167	170592167	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	2	170592167	170592167	C	G	SNP	KLHL23	ENST00000272797	human	ensembl	69_37n	+1	known	missense	c.643	p.R215G	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL23	HGNC	ENSG00000213160	54	0	0.00	47	9	16.07	-	-	-
LINC00326	0	genome.wustl.edu	37	6	133421215	133421215	+	RNA	SNP	A	A	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	133421215	133421215	A	T	SNP	LINC00326	ENST00000434443	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00326	HGNC	ENSG00000231023	195	0	0.00	146	59	28.64	-	-	-
LRRC4B	0	genome.wustl.edu	37	19	51021954	51021954	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	19	51021954	51021954	C	A	SNP	LRRC4B	ENST00000389201	human	ensembl	69_37n	-1	known	missense	c.1016	p.R339L	1.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LRRC4B	HGNC	ENSG00000131409	70	0	0.00	43	19	30.16	-	-	-
LRRIQ3	0	genome.wustl.edu	37	1	74507371	74507371	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	1	74507371	74507371	A	C	SNP	LRRIQ3	ENST00000354431	human	ensembl	69_37n	-1	known	missense	c.1244	p.M415R	0.410	NULL	pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620	266	0	0.00	168	66	28.21	-	-	-
LYNX1	0	genome.wustl.edu	37	8	143856615	143856615	+	Silent	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	8	143856615	143856615	G	A	SNP	LYNX1	ENST00000345173	human	ensembl	69_37n	-1	known	silent	c.321	p.I107	0.000	NULL	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LYNX1	HGNC	ENSG00000180155	47	0	0.00	38	16	29.63	-	-	-
MGA	0	genome.wustl.edu	37	15	42058547	42058547	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	15	42058547	42058547	A	G	SNP	MGA	ENST00000219905	human	ensembl	69_37n	+1	known	missense	c.8267	p.Y2756C	0.218	NULL	pfam_TF_T-box,pfam_HLH_DNA-bd,superfamily_p53-like_TF_DNA-bd,superfamily_HLH_DNA-bd,smart_TF_T-box,smart_HLH_DNA-bd,prints_TF_T-box,pfscan_HLH_DNA-bd,pfscan_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197	70	0	0.00	29	21	42.00	-	-	-
MME	0	genome.wustl.edu	37	3	154889935	154889935	+	Silent	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	3	154889935	154889935	C	T	SNP	MME	ENST00000360490	human	ensembl	69_37n	+1	known	silent	c.2010	p.G670	0.008	pfam_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MME	HGNC	ENSG00000196549	154	1	0.65	148	96	39.34	-	-	-
MTA3	0	genome.wustl.edu	37	2	42931438	42931438	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	2	42931438	42931438	G	A	SNP	MTA3	ENST00000405094	human	ensembl	69_37n	+1	known	missense	c.1130	p.R377K	0.995	smart_Znf_GATA	pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	MTA3	HGNC	ENSG00000057935	108	0	0.00	82	22	21.15	-	-	-
N4BP2L2	0	genome.wustl.edu	37	13	33109915	33109915	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	13	33109915	33109915	G	A	SNP	N4BP2L2	ENST00000267068	human	ensembl	69_37n	-1	known	missense	c.1250	p.T417I	0.997	pfam_Zeta_toxin_domain	pfam_Zeta_toxin_domain	-	no_errors	N4BP2L2	HGNC	ENSG00000244754	61	0	0.00	28	24	45.28	-	-	-
NEK5	0	genome.wustl.edu	37	13	52701581	52701581	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	13	52701581	52701581	C	A	SNP	NEK5	ENST00000355568	human	ensembl	69_37n	-1	known	missense	c.38	p.G13V	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK5	HGNC	ENSG00000197168	221	0	0.00	115	57	33.14	-	-	-
NLRC5	0	genome.wustl.edu	37	16	57092939	57092940	+	Frame_Shift_Ins	INS	-	-	TGTA			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	16	57092939	57092940	-	TGTA	INS	NLRC5	ENST00000262510	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3886_3887	p.P1296fs	0.779:0.769	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853	148	0	0.00	65	40	38.10	-	-	-
NLRC5	0	genome.wustl.edu	37	16	57092943	57092943	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	16	57092943	57092943	C	G	SNP	NLRC5	ENST00000262510	human	ensembl	69_37n	+1	known	missense	c.3890	p.S1297C	0.383	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853	144	0	0.00	62	42	40.00	-	-	-
PCYT2	0	genome.wustl.edu	37	17	79864664	79864664	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	17	79864664	79864664	G	C	SNP	PCYT2	ENST00000538721	human	ensembl	69_37n	-1	known	missense	c.702	p.I234M	1.000	tigrfam_Cyt_trans-rel	pfam_Cytidylyltransf,tigrfam_Cyt_trans-rel	-	no_errors	PCYT2	HGNC	ENSG00000185813	57	0	0.00	54	15	21.74	-	-	-
PIWIL2	0	genome.wustl.edu	37	8	22172647	22172647	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	8	22172647	22172647	G	A	SNP	PIWIL2	ENST00000356766	human	ensembl	69_37n	+1	known	missense	c.2197	p.D733N	0.997	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL2	HGNC	ENSG00000197181	195	0	0.00	138	28	16.77	-	-	-
PNMAL1	0	genome.wustl.edu	37	19	46973872	46973872	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	19	46973872	46973872	G	A	SNP	PNMAL1	ENST00000313683	human	ensembl	69_37n	-1	known	nonsense	c.421	p.Q141*	0.008	NULL	NULL	-	no_errors	PNMAL1	HGNC	ENSG00000182013	42	0	0.00	37	13	26.00	-	-	-
POGZ	0	genome.wustl.edu	37	1	151403234	151403234	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	1	151403234	151403234	G	C	SNP	POGZ	ENST00000271715	human	ensembl	69_37n	-1	known	missense	c.367	p.Q123E	1.000	NULL	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_Znf_C2H2	-	no_errors	POGZ	HGNC	ENSG00000143442	133	0	0.00	176	29	14.15	-	-	-
PPFIA4	0	genome.wustl.edu	37	1	203040821	203040821	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	1	203040821	203040821	C	T	SNP	PPFIA4	ENST00000367240	human	ensembl	69_37n	+1	known	missense	c.3263	p.A1088V	1.000	pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_Prefoldin,smart_SAM,pfscan_SAM	-	no_errors	PPFIA4	HGNC	ENSG00000143847	93	0	0.00	68	28	29.17	-	-	-
PRIC285	0	genome.wustl.edu	37	20	62197238	62197238	+	Silent	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	20	62197238	62197238	C	T	SNP	PRIC285	ENST00000467148	human	ensembl	69_37n	-1	known	silent	c.2937	p.E979	0.000	NULL	pfam_RNase_II/R,smart_RNase_II/R	-	no_errors	RP4-697K14.7	Clone_based_vega_gene	ENSG00000130589	8	0	0.00	7	4	36.36	-	-	-
PTCRA	0	genome.wustl.edu	37	6	42891993	42891993	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	42891993	42891993	C	T	SNP	PTCRA	ENST00000304672	human	ensembl	69_37n	+1	known	missense	c.406	p.P136S	0.015	NULL	NULL	-	no_errors	PTCRA	HGNC	ENSG00000171611	45	0	0.00	45	13	22.03	-	-	-
PTH2	0	genome.wustl.edu	37	19	49926530	49926531	+	In_Frame_Ins	INS	-	-	CAG			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	19	49926530	49926531	-	CAG	INS	PTH2	ENST00000270631	human	ensembl	69_37n	-1	known	in_frame_ins	c.67_66	p.22in_frame_insL	0.016:0.016	NULL	NULL	-	no_errors	PTH2	HGNC	ENSG00000142538	15	0	0.00	13	3	18.75	-	-	-
PTPRR	0	genome.wustl.edu	37	12	71054738	71054738	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	12	71054738	71054738	G	T	SNP	PTPRR	ENST00000283228	human	ensembl	69_37n	-1	known	missense	c.1748	p.P583H	1.000	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRR	HGNC	ENSG00000153233	108	0	0.00	70	35	33.33	-	-	-
PZP	0	genome.wustl.edu	37	12	9312950	9312950	+	Silent	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	12	9312950	9312950	C	T	SNP	PZP	ENST00000261336	human	ensembl	69_37n	-1	known	silent	c.3009	p.T1003	0.000	superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838	200	0	0.00	130	108	45.38	-	-	-
RNA5-8SP6	0	genome.wustl.edu	37	Y	10037867	10037867	+	RNA	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	Y	10037867	10037867	C	T	SNP	RNA5-8SP6	ENST00000515896	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP6	HGNC	ENSG00000251705	19	0	0.00	19	9	32.14	-	-	-
RNU6-42	0	genome.wustl.edu	37	3	196511870	196511870	+	RNA	SNP	C	C	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	3	196511870	196511870	C	T	SNP	RNU6-42	ENST00000384165	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RNU6-42	HGNC	ENSG00000206892	10	0	0.00	4	4	50.00	-	-	-
SCN3A	0	genome.wustl.edu	37	2	166020192	166020192	+	Silent	SNP	G	G	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	2	166020192	166020192	G	T	SNP	SCN3A	ENST00000283254	human	ensembl	69_37n	-1	known	silent	c.630	p.G210	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN3A	HGNC	ENSG00000153253	248	0	0.00	198	61	23.55	-	-	-
SEMA5A	0	genome.wustl.edu	37	5	9202316	9202316	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	5	9202316	9202316	A	C	SNP	SEMA5A	ENST00000382496	human	ensembl	69_37n	-1	known	missense	c.683	p.F228C	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Thrombospondin_1_rpt,superfamily_Semaphorin/CD100_Ag,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Thrombospondin_1_rpt,pfscan_Semaphorin/CD100_Ag,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902	78	0	0.00	109	26	19.26	-	-	-
SIGLEC16	0	genome.wustl.edu	37	19	50474928	50474928	+	Silent	SNP	T	T	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	19	50474928	50474928	T	G	SNP	SIGLEC16	ENST00000456956	human	ensembl	69_37n	+1	known	silent	c.978	p.P326	0.253	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	SIGLEC16	HGNC	ENSG00000161643	165	0	0.00	149	63	29.72	-	-	-
SLC17A3	0	genome.wustl.edu	37	6	25862627	25862627	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	25862627	25862627	T	C	SNP	SLC17A3	ENST00000397060	human	ensembl	69_37n	-1	known	missense	c.137	p.H46R	0.014	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A3	HGNC	ENSG00000124564	191	0	0.00	186	53	22.18	-	-	-
SPG11	0	genome.wustl.edu	37	15	44905735	44905735	+	Splice_Site	SNP	C	C	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	15	44905735	44905735	C	A	SNP	SPG11	ENST00000261866	human	ensembl	69_37n	-1	known	splice_site	c.3039-1	e17-1	1.000	-	-	-	no_errors	SPG11	HGNC	ENSG00000104133	146	0	0.00	89	14	13.59	-	-	-
TCTE1	0	genome.wustl.edu	37	6	44253808	44253808	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	44253808	44253808	A	T	SNP	TCTE1	ENST00000371505	human	ensembl	69_37n	-1	known	missense	c.739	p.Y247N	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	TCTE1	HGNC	ENSG00000146221	80	0	0.00	108	26	19.26	-	-	-
TMEM106B	0	genome.wustl.edu	37	7	12258129	12258129	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	7	12258129	12258129	G	C	SNP	TMEM106B	ENST00000396667	human	ensembl	69_37n	+1	known	missense	c.263	p.R88T	1.000	pfam_DUF1356_TMEM106	pfam_DUF1356_TMEM106	-	no_errors	TMEM106B	HGNC	ENSG00000106460	202	0	0.00	154	42	21.43	-	-	-
TMPPE	0	genome.wustl.edu	37	3	33135493	33135493	+	Silent	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	3	33135493	33135493	G	A	SNP	TMPPE	ENST00000342462	human	ensembl	69_37n	-1	known	silent	c.195	p.R65	0.065	NULL	pfam_Metallo_PEstase_dom	-	no_errors	TMPPE	HGNC	ENSG00000188167	27	0	0.00	16	8	33.33	-	-	-
TRAF7	0	genome.wustl.edu	37	16	2222552	2222552	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	16	2222552	2222552	C	A	SNP	TRAF7	ENST00000326181	human	ensembl	69_37n	+1	known	missense	c.746	p.A249D	1.000	superfamily_TRAF-like,pfscan_Znf_TRAF	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_TRAF-like,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_Znf_TRAF,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TRAF7	HGNC	ENSG00000131653	11	0	0.00	6	7	53.85	-	-	-
VPS13A	0	genome.wustl.edu	37	9	79955388	79955388	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	9	79955388	79955388	G	C	SNP	VPS13A	ENST00000360280	human	ensembl	69_37n	+1	known	missense	c.6948	p.M2316I	1.000	pfam_VPSAP	pfam_VPSAP,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969	122	1	0.81	101	39	27.46	-	-	-
VSIG10L	0	genome.wustl.edu	37	19	51841274	51841274	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	19	51841274	51841274	C	A	SNP	VSIG10L	ENST00000335624	human	ensembl	69_37n	-1	known	missense	c.1918	p.G640C	0.889	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	VSIG10L	HGNC	ENSG00000186806	66	0	0.00	54	29	34.94	-	-	-
WDR76	0	genome.wustl.edu	37	15	44134845	44134845	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	15	44134845	44134845	A	C	SNP	WDR76	ENST00000263795	human	ensembl	69_37n	+1	known	missense	c.854	p.E285A	0.013	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR76	HGNC	ENSG00000092470	139	0	0.00	64	28	30.43	-	-	-
ZBTB22	0	genome.wustl.edu	37	6	33282945	33282945	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	6	33282945	33282945	C	-	DEL	ZBTB22	ENST00000418724	human	ensembl	69_37n	-1	known	frame_shift_del	c.1749	p.P584fs	0.003	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB22	HGNC	ENSG00000236104	23	0	0.00	37	15	28.30	-	-	-
ZEB2	0	genome.wustl.edu	37	2	145157550	145157550	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	2	145157550	145157550	C	G	SNP	ZEB2	ENST00000303660	human	ensembl	69_37n	-1	known	missense	c.1204	p.V402L	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZEB2	HGNC	ENSG00000169554	132	0	0.00	90	33	26.61	-	-	-
ZNF578	0	genome.wustl.edu	37	19	53014843	53014843	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	19	53014843	53014843	A	C	SNP	ZNF578	ENST00000421239	human	ensembl	69_37n	+1	known	missense	c.1209	p.E403D	0.049	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF578	HGNC	ENSG00000258405	135	0	0.00	105	40	27.59	-	-	-
ZNF670	0	genome.wustl.edu	37	1	247201519	247201519	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	1	247201519	247201519	C	G	SNP	ZNF670	ENST00000366503	human	ensembl	69_37n	-1	known	missense	c.402	p.E134D	0.984	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF670	HGNC	ENSG00000135747	131	0	0.00	164	30	15.46	-	-	-
ZNF8	0	genome.wustl.edu	37	19	58790466	58790466	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0AV-01A-31D-A10Y-09	TCGA-BH-A0AV-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9032b7fe-e38a-4641-a45e-67041668adc4	3ab50b2e-8b0c-4ccd-b6bf-d577f5e9fc94	19	58790466	58790466	G	A	SNP	ZNF8	ENST00000196548	human	ensembl	69_37n	+1	known	missense	c.19	p.G7R	0.010	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF8	HGNC	ENSG00000083842	57	0	0.00	41	5	10.87	-	-	-
