Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ATG16L1	0	genome.wustl.edu	37	2	234201936	234201936	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	2	234201936	234201936	G	A	SNP	ATG16L1	ENST00000392017	human	ensembl	69_37n	+1	known	missense	c.1663	p.E555K	0.994	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Autophagy-rel_prot_16,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ATG16L1	HGNC	ENSG00000085978	211	1	0.47	124	133	51.75	-	-	-
CACHD1	0	genome.wustl.edu	37	1	65120486	65120486	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	1	65120486	65120486	G	A	SNP	CACHD1	ENST00000371073	human	ensembl	69_37n	+1	known	missense	c.1782	p.M594I	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfscan_VWF_A	-	no_errors	CACHD1	HGNC	ENSG00000158966	284	0	0.00	126	110	46.41	-	-	-
CASZ1	0	genome.wustl.edu	37	1	10714168	10714168	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	1	10714168	10714168	T	C	SNP	CASZ1	ENST00000377022	human	ensembl	69_37n	-1	known	missense	c.1946	p.Y649C	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	191	1	0.52	89	72	44.72	-	-	-
CBLB	0	genome.wustl.edu	37	3	105397361	105397361	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	3	105397361	105397361	G	A	SNP	CBLB	ENST00000264122	human	ensembl	69_37n	-1	known	missense	c.2483	p.A828V	1.000	NULL	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/transl_elong_EF1B_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBLB	HGNC	ENSG00000114423	330	0	0.00	229	39	14.39	-	-	-
CDH1	0	genome.wustl.edu	37	16	68842414	68842414	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	16	68842414	68842414	C	-	DEL	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_del	c.475	p.P159fs	1.000	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	190	0	0.00	137	66	31.88	-	-	-
COL17A1	0	genome.wustl.edu	37	10	105801282	105801282	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	10	105801282	105801282	G	A	SNP	COL17A1	ENST00000353479	human	ensembl	69_37n	-1	known	nonsense	c.2566	p.Q856*	1.000	NULL	pfam_Collagen	-	no_errors	COL17A1	HGNC	ENSG00000065618	82	0	0.00	70	13	15.66	-	-	-
DNM1P46	0	genome.wustl.edu	37	15	100340097	100340097	+	RNA	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	15	100340097	100340097	C	T	SNP	DNM1P46	ENST00000341853	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	12	0	0.00	8	7	46.67	-	-	-
DNM1P46	0	genome.wustl.edu	37	15	100340123	100340125	+	RNA	DEL	AGA	AGA	-			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	15	100340123	100340125	AGA	-	DEL	DNM1P46	ENST00000341853	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.899:0.883:0.880	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	9	0	0.00	11	6	35.29	-	-	-
EEF1D	0	genome.wustl.edu	37	8	144662795	144662795	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	8	144662795	144662795	C	T	SNP	EEF1D	ENST00000423316	human	ensembl	69_37n	-1	known	missense	c.1591	p.E531K	1.000	pfam_EF-1_beta_acid_region_euk	pfam_Transl_elong_fac_EF1B_bsu/dsu,pfam_EF-1_beta_acid_region_euk,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu	-	no_errors	EEF1D	HGNC	ENSG00000104529	138	0	0.00	86	49	35.77	-	-	-
ERBB2	0	genome.wustl.edu	37	17	37881000	37881000	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	17	37881000	37881000	G	C	SNP	ERBB2	ENST00000269571	human	ensembl	69_37n	+1	known	missense	c.2329	p.V777L	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	118	0	0.00	77	46	37.40	-	-	-
FBXO18	0	genome.wustl.edu	37	10	5945053	5945053	+	Silent	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	10	5945053	5945053	G	A	SNP	FBXO18	ENST00000379999	human	ensembl	69_37n	+1	known	silent	c.225	p.V75	0.989	NULL	pfam_UvrD-like_ATP-bd,pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like	-	no_errors	FBXO18	HGNC	ENSG00000134452	107	0	0.00	108	23	17.42	-	-	-
GRID2IP	0	genome.wustl.edu	37	7	6541690	6541690	+	Silent	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	7	6541690	6541690	C	T	SNP	GRID2IP	ENST00000457091	human	ensembl	69_37n	-1	putative	silent	c.3210	p.S1070	0.786	pfam_FH2_actin-bd,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg	pfam_FH2_actin-bd,pfam_PDZ,superfamily_FH2_actin-bd,superfamily_PDZ,smart_PDZ,smart_Actin-bd_FH2/DRF_autoreg,pfscan_PDZ	-	no_errors	GRID2IP	HGNC	ENSG00000215045	93	0	0.00	99	14	12.28	-	-	-
HECW1	0	genome.wustl.edu	37	7	43484146	43484146	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	7	43484146	43484146	G	T	SNP	HECW1	ENST00000395891	human	ensembl	69_37n	+1	known	missense	c.1375	p.A459S	0.073	NULL	pfam_HECT,pfam_WW_Rsp5_WWP,pfam_C2_Ca-dep,superfamily_HECT,superfamily_WW_Rsp5_WWP,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_WW_Rsp5_WWP,smart_HECT,pfscan_HECT,pfscan_C2_membr_targeting,pfscan_WW_Rsp5_WWP	-	no_errors	HECW1	HGNC	ENSG00000002746	38	0	0.00	35	15	30.00	-	-	-
HIST2H2BE	0	genome.wustl.edu	37	1	149858180	149858180	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	1	149858180	149858180	G	A	SNP	HIST2H2BE	ENST00000369155	human	ensembl	69_37n	-1	known	missense	c.11	p.P4L	0.997	NULL	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST2H2BE	HGNC	ENSG00000184678	287	0	0.00	231	348	60.00	-	-	-
IARS	0	genome.wustl.edu	37	9	95027830	95027830	+	Silent	SNP	T	T	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	9	95027830	95027830	T	A	SNP	IARS	ENST00000375643	human	ensembl	69_37n	-1	known	silent	c.1437	p.V479	0.628	pfam_aa-tRNA-synth_Ia,tigrfam_Ile-tRNA-synt	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Ile-tRNA-synt,tigrfam_Ile-tRNA-synt	-	no_errors	IARS	HGNC	ENSG00000196305	224	0	0.00	267	66	19.82	-	-	-
MAGEA12	0	genome.wustl.edu	37	X	151899975	151899975	+	Silent	SNP	T	T	G			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	X	151899975	151899975	T	G	SNP	MAGEA12	ENST00000357916	human	ensembl	69_37n	-1	known	silent	c.826	p.R276	0.401	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA12	HGNC	ENSG00000213401	386	0	0.00	366	66	15.21	-	-	-
MAN2A1	0	genome.wustl.edu	37	5	109183450	109183450	+	Silent	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	5	109183450	109183450	C	T	SNP	MAN2A1	ENST00000261483	human	ensembl	69_37n	+1	known	silent	c.2935	p.L979	1.000	pfam_Glyco_hydro_38_C,superfamily_Glyco_hydro-type_carb-bd	pfam_Glyco_hydro_38_core,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Glyco_hydro-type_carb-bd,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2A1	HGNC	ENSG00000112893	276	0	0.00	260	107	28.76	-	-	-
MID1	0	genome.wustl.edu	37	X	10534972	10534972	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	X	10534972	10534972	C	T	SNP	MID1	ENST00000317552	human	ensembl	69_37n	-1	known	missense	c.616	p.D206N	1.000	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	MID1	HGNC	ENSG00000101871	151	0	0.00	144	38	20.88	-	-	-
OR4S2	0	genome.wustl.edu	37	11	55418854	55418854	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	11	55418854	55418854	G	A	SNP	OR4S2	ENST00000312422	human	ensembl	69_37n	+1	known	missense	c.475	p.A159T	0.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	254	0	0.00	159	96	37.65	-	-	-
PCNT	0	genome.wustl.edu	37	21	47836277	47836277	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	21	47836277	47836277	G	A	SNP	PCNT	ENST00000359568	human	ensembl	69_37n	+1	known	missense	c.6445	p.A2149T	0.002	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	130	0	0.00	131	23	14.84	-	-	-
PLEKHA8P1	0	genome.wustl.edu	37	12	45567613	45567613	+	RNA	SNP	C	C	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	12	45567613	45567613	C	A	SNP	PLEKHA8P1	ENST00000256692	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.313	-	-	-	no_errors	PLEKHA8P1	HGNC	ENSG00000134297	385	0	0.00	439	60	11.95	-	-	-
PODN	0	genome.wustl.edu	37	1	53537273	53537273	+	Silent	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	1	53537273	53537273	C	T	SNP	PODN	ENST00000312553	human	ensembl	69_37n	+1	known	silent	c.523	p.L175	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PODN	HGNC	ENSG00000174348	70	0	0.00	56	15	21.13	-	-	-
PRMT10	0	genome.wustl.edu	37	4	148575485	148575485	+	Silent	SNP	T	T	C			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	4	148575485	148575485	T	C	SNP	PRMT10	ENST00000322396	human	ensembl	69_37n	-1	known	silent	c.1563	p.E521	0.899	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRMT10	HGNC	ENSG00000164169	303	0	0.00	213	113	34.56	-	-	-
RUNX1	0	genome.wustl.edu	37	21	36252958	36252958	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	21	36252958	36252958	C	T	SNP	RUNX1	ENST00000300305	human	ensembl	69_37n	-1	known	missense	c.404	p.G135D	1.000	pfam_AML1/Runt_N,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	pfam_AML1/Runt_N,pfam_RunxI,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt	-	no_errors	RUNX1	HGNC	ENSG00000159216	197	0	0.00	168	85	33.33	-	-	-
SCAP	0	genome.wustl.edu	37	3	47467065	47467065	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	3	47467065	47467065	G	A	SNP	SCAP	ENST00000265565	human	ensembl	69_37n	-1	known	missense	c.947	p.A316V	1.000	pfam_Patched,pfscan_SSD	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650	53	0	0.00	58	11	15.71	-	-	-
SLC52A2	0	genome.wustl.edu	37	8	145584130	145584130	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	8	145584130	145584130	C	-	DEL	SLC52A2	ENST00000329994	human	ensembl	69_37n	+1	known	frame_shift_del	c.978	p.L327fs	0.994	pfam_Endogenous_retrovirus_rcpt	pfam_Endogenous_retrovirus_rcpt	-	no_errors	SLC52A2	HGNC	ENSG00000185803	46	0	0.00	35	13	26.53	-	-	-
STARD8	0	genome.wustl.edu	37	X	67940160	67940160	+	Silent	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	X	67940160	67940160	C	T	SNP	STARD8	ENST00000374599	human	ensembl	69_37n	+1	known	silent	c.1944	p.H648	0.914	NULL	pfam_START_lipid-bd,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd,pfscan_START_lipid-bd,pfscan_RhoGAP_dom	-	no_errors	STARD8	HGNC	ENSG00000130052	66	0	0.00	62	12	16.22	-	-	-
TRADD	0	genome.wustl.edu	37	16	67190466	67190466	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	16	67190466	67190466	G	A	SNP	TRADD	ENST00000345057	human	ensembl	69_37n	-1	known	missense	c.98	p.A33V	0.032	superfamily_TRADD_N	pfam_TRADD_N,pfam_Death,superfamily_TRADD_N,superfamily_DEATH-like,smart_Death,pfscan_Death	-	no_errors	TRADD	HGNC	ENSG00000102871	79	0	0.00	47	10	17.24	-	-	-
VPS35	0	genome.wustl.edu	37	16	46695632	46695632	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	16	46695632	46695632	C	T	SNP	VPS35	ENST00000299138	human	ensembl	69_37n	-1	known	missense	c.2209	p.A737T	1.000	pfam_VPS35,superfamily_ARM-type_fold	pfam_VPS35,superfamily_ARM-type_fold	-	no_errors	VPS35	HGNC	ENSG00000069329	122	0	0.00	99	35	26.12	-	-	-
VWA7	0	genome.wustl.edu	37	6	31741200	31741200	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	6	31741200	31741200	C	T	SNP	VWA7	ENST00000375686	human	ensembl	69_37n	-1	known	missense	c.736	p.G246R	1.000	NULL	NULL	-	no_errors	VWA7	HGNC	ENSG00000204396	164	0	0.00	101	61	37.42	-	-	-
YAP1	0	genome.wustl.edu	37	11	102100570	102100570	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	11	102100570	102100570	C	T	SNP	YAP1	ENST00000282441	human	ensembl	69_37n	+1	known	missense	c.1414	p.P472S	1.000	NULL	pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,pfscan_WW_Rsp5_WWP	-	no_errors	YAP1	HGNC	ENSG00000137693	284	0	0.00	236	49	17.07	-	-	-
YME1L1	0	genome.wustl.edu	37	10	27436575	27436575	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	10	27436575	27436575	G	A	SNP	YME1L1	ENST00000326799	human	ensembl	69_37n	-1	known	missense	c.191	p.T64M	0.039	NULL	pfam_Peptidase_M41,pfam_ATPase_AAA_core,smart_AAA+_ATPase,tigrfam_FtsH	-	no_errors	YME1L1	HGNC	ENSG00000136758	277	0	0.00	172	116	40.00	-	-	-
ZNF841	0	genome.wustl.edu	37	19	52569331	52569331	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	19	52569331	52569331	A	C	SNP	ZNF841	ENST00000389534	human	ensembl	69_37n	-1	known	missense	c.1804	p.C602G	0.835	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF841	HGNC	ENSG00000197608	230	0	0.00	273	48	14.86	-	-	-
