Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCB11	0	genome.wustl.edu	37	2	169842673	169842673	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	2	169842673	169842673	C	T	SNP	ABCB11	ENST00000263817	human	ensembl	69_37n	-1	known	missense	c.1030	p.G344S	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC_transptrTM_dom_typ1,pfscan_ABC_transporter_type1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB11	HGNC	ENSG00000073734	327	0	0.00	193	70	26.62	-	-	-
AKAP13	0	genome.wustl.edu	37	15	86123003	86123003	+	Silent	SNP	G	G	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	15	86123003	86123003	G	A	SNP	AKAP13	ENST00000361243	human	ensembl	69_37n	+1	known	silent	c.1704	p.T568	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776	39	0	0.00	40	5	10.87	-	-	-
ASIC4	0	genome.wustl.edu	37	2	220402756	220402756	+	Silent	SNP	T	T	C			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	2	220402756	220402756	T	C	SNP	ASIC4	ENST00000347842	human	ensembl	69_37n	+1	known	silent	c.1932	p.D644	1.000	NULL	pfam_Na+channel_ASC,prints_Na+channel_ASC	-	no_errors	ASIC4	HGNC	ENSG00000072182	107	0	0.00	32	32	50.00	-	-	-
CHRNA1	0	genome.wustl.edu	37	2	175624061	175624061	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	2	175624061	175624061	G	T	SNP	CHRNA1	ENST00000261007	human	ensembl	69_37n	-1	known	missense	c.232	p.Q78K	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNA1	HGNC	ENSG00000138435	143	0	0.00	51	42	45.16	-	-	-
COL19A1	0	genome.wustl.edu	37	6	70639432	70639432	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	6	70639432	70639432	G	A	SNP	COL19A1	ENST00000322773	human	ensembl	69_37n	+1	known	missense	c.506	p.R169H	1.000	superfamily_ConA-like_lec_gl,smart_Laminin_G	pfam_Collagen,superfamily_ConA-like_lec_gl,smart_Laminin_G	-	no_errors	COL19A1	HGNC	ENSG00000082293	384	0	0.00	226	148	39.57	-	-	-
CXorf40A	0	genome.wustl.edu	37	X	148627391	148627391	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	X	148627391	148627391	T	G	SNP	CXorf40A	ENST00000359293	human	ensembl	69_37n	+1	known	missense	c.215	p.L72R	0.008	superfamily_PUA-like_domain	superfamily_PUA-like_domain	-	no_errors	CXorf40A	HGNC	ENSG00000197620	37	0	0.00	12	18	60.00	-	-	-
DCHS2	0	genome.wustl.edu	37	4	155180776	155180776	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	4	155180776	155180776	T	A	SNP	DCHS2	ENST00000357232	human	ensembl	69_37n	-1	known	missense	c.5345	p.D1782V	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	299	0	0.00	110	93	45.59	-	-	-
EIF5B	0	genome.wustl.edu	37	2	99993052	99993052	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	2	99993052	99993052	C	T	SNP	EIF5B	ENST00000289371	human	ensembl	69_37n	+1	known	missense	c.1795	p.R599W	1.000	NULL	pfam_ProtSyn_GTP-bd,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_init/rib_B-barrel,superfamily_TIF_IF2_dom3,prints_ProtSyn_GTP-bd,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417	600	0	0.00	329	106	24.37	-	-	-
FMN2	0	genome.wustl.edu	37	1	240371704	240371704	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	1	240371704	240371704	C	A	SNP	FMN2	ENST00000319653	human	ensembl	69_37n	+1	known	missense	c.3592	p.P1198T	1.000	pfam_Formin_homology_1,smart_Actin-bd_FH2/DRF_autoreg	pfam_FH2_actin-bd,pfam_Formin_homology_1,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	26	0	0.00	12	21	63.64	-	-	-
FNDC4	0	genome.wustl.edu	37	2	27717516	27717517	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	2	27717516	27717517	-	G	INS	FNDC4	ENST00000264703	human	ensembl	69_37n	-1	known	frame_shift_ins	c.31_30	p.S10fs	0.989:0.915	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC4	HGNC	ENSG00000115226	23	0	0.00	44	6	12.00	-	-	-
GOLGA6L1	0	genome.wustl.edu	37	15	22742829	22742829	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	15	22742829	22742829	T	G	SNP	GOLGA6L1	ENST00000316397	human	ensembl	69_37n	+1	known	missense	c.1214	p.I405R	0.161	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L1	HGNC	ENSG00000197414	42	0	0.00	14	6	30.00	-	-	-
GPKOW	0	genome.wustl.edu	37	X	48972279	48972279	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	X	48972279	48972279	T	C	SNP	GPKOW	ENST00000156109	human	ensembl	69_37n	-1	known	missense	c.1106	p.N369S	0.863	NULL	pfam_KOW,pfam_G_patch_dom,superfamily_Translation_prot_SH3-like,smart_G_patch_dom,smart_KOW,pfscan_G_patch_dom	-	no_errors	GPKOW	HGNC	ENSG00000068394	109	0	0.00	57	76	57.14	-	-	-
HSPA5	0	genome.wustl.edu	37	9	128001807	128001807	+	Silent	SNP	G	G	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	9	128001807	128001807	G	A	SNP	HSPA5	ENST00000324460	human	ensembl	69_37n	-1	known	silent	c.498	p.T166	0.959	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA5	HGNC	ENSG00000044574	77	0	0.00	53	27	33.75	-	-	-
INSL5	0	genome.wustl.edu	37	1	67266829	67266829	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	1	67266829	67266829	C	A	SNP	INSL5	ENST00000304526	human	ensembl	69_37n	-1	known	missense	c.76	p.V26L	0.028	superfamily_Insulin-like,smart_Insulin-like	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like	-	no_errors	INSL5	HGNC	ENSG00000172410	182	0	0.00	263	80	23.32	-	-	-
LILRA6	0	genome.wustl.edu	37	19	54745497	54745497	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	19	54745497	54745497	G	A	SNP	LILRA6	ENST00000270464	human	ensembl	69_37n	-1	known	missense	c.613	p.R205W	0.022	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LILRA6	HGNC	ENSG00000244482	15	0	0.00	10	6	37.50	-	-	-
MBD6	0	genome.wustl.edu	37	12	57921731	57921732	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	12	57921731	57921732	-	G	INS	MBD6	ENST00000355673	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2337_2338	p.A782fs	1.000:1.000	NULL	superfamily_DNA-bd_integrase-typ,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987	8	0	0.00	14	3	17.65	-	-	-
MDN1	0	genome.wustl.edu	37	6	90402292	90402292	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	6	90402292	90402292	C	G	SNP	MDN1	ENST00000369393	human	ensembl	69_37n	-1	known	missense	c.10457	p.G3486A	0.234	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	52	0	0.00	60	43	41.75	-	-	-
MST1P9	0	genome.wustl.edu	37	1	17083888	17083888	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	1	17083888	17083888	C	T	SNP	MST1P9	ENST00000334998	human	ensembl	69_37n	-1	known	missense	c.1909	p.G637S	1.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	MST1P9	HGNC	ENSG00000186715	33	0	0.00	30	6	16.67	-	-	-
MUC2	0	genome.wustl.edu	37	11	1090919	1090919	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	11	1090919	1090919	A	C	SNP	MUC2	ENST00000441003	human	ensembl	69_37n	+1	known	missense	c.3814	p.T1272P	0.002	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	27	0	0.00	28	10	26.32	-	-	-
NR4A3	0	genome.wustl.edu	37	9	102626006	102626006	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	9	102626006	102626006	G	A	SNP	NR4A3	ENST00000330847	human	ensembl	69_37n	+1	known	missense	c.1771	p.E591K	0.977	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_NOR1_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NOR1_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A3	HGNC	ENSG00000119508	194	0	0.00	142	72	33.64	-	-	-
OR2T2	0	genome.wustl.edu	37	1	248616883	248616883	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	1	248616883	248616883	T	A	SNP	OR2T2	ENST00000342927	human	ensembl	69_37n	+1	known	missense	c.785	p.L262Q	0.339	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240	34	0	0.00	173	24	12.12	-	-	-
OR6P1	0	genome.wustl.edu	37	1	158532693	158532693	+	Silent	SNP	G	G	C			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	1	158532693	158532693	G	C	SNP	OR6P1	ENST00000334632	human	ensembl	69_37n	-1	known	silent	c.702	p.R234	0.006	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR6P1	HGNC	ENSG00000186440	101	0	0.00	170	51	23.08	-	-	-
ORM2	0	genome.wustl.edu	37	9	117092701	117092701	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	9	117092701	117092701	C	A	SNP	ORM2	ENST00000412657	human	ensembl	69_37n	+1	known	missense	c.517	p.P173T	0.000	NULL	NULL	-	no_errors	ORM2	HGNC	ENSG00000228278	71	0	0.00	58	12	17.14	-	-	-
PIWIL1	0	genome.wustl.edu	37	12	130827144	130827144	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	12	130827144	130827144	G	A	SNP	PIWIL1	ENST00000245255	human	ensembl	69_37n	+1	known	missense	c.8	p.G3E	1.000	pfam_GAGE	pfam_Piwi,pfam_PAZ,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	97	0	0.00	69	25	26.60	-	-	-
PLAU	0	genome.wustl.edu	37	10	75673437	75673438	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	10	75673437	75673438	-	G	INS	PLAU	ENST00000372764	human	ensembl	69_37n	+1	known	frame_shift_ins	c.601_602	p.S204fs	0.156:0.201	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,pfam_Kringle,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1_S6,pfscan_EG-like_dom,pfscan_Kringle,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	PLAU	HGNC	ENSG00000122861	24	0	0.00	23	3	11.54	-	-	-
POC5	0	genome.wustl.edu	37	5	74998503	74998503	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	5	74998503	74998503	C	A	SNP	POC5	ENST00000428202	human	ensembl	69_37n	-1	known	missense	c.440	p.S147I	0.000	NULL	NULL	-	no_errors	POC5	HGNC	ENSG00000152359	292	0	0.00	168	127	43.05	-	-	-
RIF1	0	genome.wustl.edu	37	2	152320145	152320145	+	Missense_Mutation	SNP	A	A	T			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	2	152320145	152320145	A	T	SNP	RIF1	ENST00000243326	human	ensembl	69_37n	+1	known	missense	c.4111	p.N1371Y	0.024	NULL	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_errors	RIF1	HGNC	ENSG00000080345	70	0	0.00	35	31	46.97	-	-	-
RP1L1	0	genome.wustl.edu	37	8	10466220	10466220	+	Silent	SNP	G	G	T			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	8	10466220	10466220	G	T	SNP	RP1L1	ENST00000382483	human	ensembl	69_37n	-1	known	silent	c.5388	p.G1796	0.000	NULL	pfam_Doublecortin_dom,superfamily_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	151	0	0.00	37	26	41.27	-	-	-
SCAF1	0	genome.wustl.edu	37	19	50158041	50158042	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	19	50158041	50158042	-	C	INS	SCAF1	ENST00000360565	human	ensembl	69_37n	+1	known	frame_shift_ins	c.3532_3533	p.T1181fs	0.839:0.934	NULL	NULL	-	no_errors	SCAF1	HGNC	ENSG00000126461	34	0	0.00	38	6	13.64	-	-	-
SERPINA1	0	genome.wustl.edu	37	14	94845800	94845800	+	Splice_Site	SNP	C	C	T			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	14	94845800	94845800	C	T	SNP	SERPINA1	ENST00000355814	human	ensembl	69_37n	-1	known	splice_site	c.1065+1	e3+1	1.000	-	-	-	no_errors	SERPINA1	HGNC	ENSG00000197249	79	0	0.00	77	55	41.67	-	-	-
SMARCC2	0	genome.wustl.edu	37	12	56559112	56559113	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	12	56559112	56559113	-	G	INS	SMARCC2	ENST00000267064	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3129_3128	p.G1044fs	1.000:1.000	NULL	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,superfamily_BRCT_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_SANT/Myb,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	SMARCC2	HGNC	ENSG00000139613	19	0	0.00	34	4	10.53	-	-	-
SPATA22	0	genome.wustl.edu	37	17	3346557	3346557	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	17	3346557	3346557	C	A	SNP	SPATA22	ENST00000397168	human	ensembl	69_37n	-1	known	missense	c.811	p.D271Y	0.994	NULL	NULL	-	no_errors	SPATA22	HGNC	ENSG00000141255	99	0	0.00	48	17	26.15	-	-	-
TUBBP5	0	genome.wustl.edu	37	9	141070909	141070909	+	RNA	SNP	A	A	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	9	141070909	141070909	A	G	SNP	TUBBP5	ENST00000290377	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.988	-	-	-	no_errors	TUBBP5	HGNC	ENSG00000159247	48	0	0.00	23	8	25.81	-	-	-
ZNF324	0	genome.wustl.edu	37	19	58983206	58983206	+	Silent	SNP	C	C	T			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	19	58983206	58983206	C	T	SNP	ZNF324	ENST00000196482	human	ensembl	69_37n	+1	known	silent	c.1347	p.G449	0.023	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF324	HGNC	ENSG00000083812	9	0	0.00	9	6	40.00	-	-	-
ZNF420	0	genome.wustl.edu	37	19	37619086	37619086	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	19	37619086	37619086	A	G	SNP	ZNF420	ENST00000337995	human	ensembl	69_37n	+1	known	missense	c.1193	p.K398R	0.995	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF420	HGNC	ENSG00000197050	139	0	0.00	128	76	37.25	-	-	-
ZNF443	0	genome.wustl.edu	37	19	12541421	12541421	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	19	12541421	12541421	T	C	SNP	ZNF443	ENST00000301547	human	ensembl	69_37n	-1	known	missense	c.1565	p.H522R	0.452	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF443	HGNC	ENSG00000180855	189	0	0.00	174	96	35.56	-	-	-
ZNF606	0	genome.wustl.edu	37	19	58489891	58489891	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A0HU-01A-11W-A050-09	TCGA-BH-A0HU-10A-01W-A055-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b46f2619-5937-4847-bb38-fe6022225ab9	630a5659-c666-4da0-bb90-969cf071fde3	19	58489891	58489891	C	G	SNP	ZNF606	ENST00000341164	human	ensembl	69_37n	-1	known	missense	c.2157	p.E719D	0.999	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF606	HGNC	ENSG00000166704	330	0	0.00	300	82	21.47	-	-	-
