Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
CDHR1	0	genome.wustl.edu	37	10	85965678	85965678	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	10	85965678	85965678	G	A	SNP	CDHR1	ENST00000372117	human	ensembl	69_37n	+1	known	missense	c.958	p.V320I	0.956	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR1	HGNC	ENSG00000148600	208	2	0.95	162	23	12.43	-	-	-
CNGA2	0	genome.wustl.edu	37	X	150911669	150911669	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	X	150911669	150911669	G	A	SNP	CNGA2	ENST00000329903	human	ensembl	69_37n	+1	known	missense	c.694	p.D232N	0.997	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA2	HGNC	ENSG00000183862	200	1	0.50	155	27	14.75	-	-	-
FASN	0	genome.wustl.edu	37	17	80042925	80042925	+	Silent	SNP	G	G	A			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	17	80042925	80042925	G	A	SNP	FASN	ENST00000306749	human	ensembl	69_37n	-1	known	silent	c.4395	p.G1465	0.131	NULL	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	11	0	0.00	6	6	50.00	-	-	-
FBXO44	0	genome.wustl.edu	37	1	11718651	11718651	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	1	11718651	11718651	G	A	SNP	FBXO44	ENST00000376768	human	ensembl	69_37n	+1	known	missense	c.425	p.G142E	1.000	NULL	pfam_F-box-assoc_dom,pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,superfamily_Galactose-bd-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like,pfscan_F-box-assoc_dom	-	no_errors	FBXO44	HGNC	ENSG00000132879	107	1	0.93	82	16	16.16	-	-	-
GOLGA6L2	0	genome.wustl.edu	37	15	23685300	23685301	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	15	23685300	23685301	TT	-	DEL	GOLGA6L2	ENST00000567107	human	ensembl	69_37n	-1	putative	frame_shift_del	c.2322_2321	p.E774fs	0.104:0.092	NULL	NULL	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	12	0	0.00	7	4	36.36	-	-	-
GTSF1	0	genome.wustl.edu	37	12	54857054	54857054	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	12	54857054	54857054	C	T	SNP	GTSF1	ENST00000546931	human	ensembl	69_37n	-1	known	missense	c.145	p.A49T	1.000	pfam_TRM13/UPF0224_CHHC_Znf_dom	pfam_TRM13/UPF0224_CHHC_Znf_dom	-	no_errors	GTSF1	HGNC	ENSG00000170627	342	3	0.87	298	44	12.83	-	-	-
GUCY2C	0	genome.wustl.edu	37	12	14835986	14835986	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	12	14835986	14835986	C	T	SNP	GUCY2C	ENST00000261170	human	ensembl	69_37n	-1	known	missense	c.601	p.D201N	1.000	pfam_ANF_lig-bd_rcpt	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019	166	1	0.60	115	17	12.88	-	-	-
LRRC37BP1	0	genome.wustl.edu	37	17	28960257	28960257	+	RNA	SNP	T	T	A			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	17	28960257	28960257	T	A	SNP	LRRC37BP1	ENST00000398849	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.397	-	-	-	no_errors	LRRC37BP1	HGNC	ENSG00000214719	230	0	0.00	237	35	12.82	-	-	-
NACAD	0	genome.wustl.edu	37	7	45124668	45124668	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	7	45124668	45124668	T	C	SNP	NACAD	ENST00000490531	human	ensembl	69_37n	-1	known	missense	c.1111	p.T371A	1.000	NULL	pfam_Nas_poly-pep-assoc_cplx,pfscan_Nas_poly-pep-assoc_cplx	-	no_errors	NACAD	HGNC	ENSG00000136274	51	0	0.00	41	5	10.87	-	-	-
OSBPL8	0	genome.wustl.edu	37	12	76765227	76765227	+	Splice_Site	SNP	C	C	T			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	12	76765227	76765227	C	T	SNP	OSBPL8	ENST00000261183	human	ensembl	69_37n	-1	known	splice_site	c.2054+1	e18+1	1.000	-	-	-	no_errors	OSBPL8	HGNC	ENSG00000091039	460	0	0.00	411	53	11.42	-	-	-
PCSK5	0	genome.wustl.edu	37	9	78790207	78790207	+	Silent	SNP	C	C	A			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	9	78790207	78790207	C	A	SNP	PCSK5	ENST00000376767	human	ensembl	69_37n	+1	known	silent	c.2062	p.R688	0.000	NULL	pfam_Peptidase_S8/S53,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK5	HGNC	ENSG00000099139	17	0	0.00	14	8	36.36	-	-	-
PGRMC1	0	genome.wustl.edu	37	X	118377191	118377191	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	X	118377191	118377191	G	A	SNP	PGRMC1	ENST00000217971	human	ensembl	69_37n	+1	known	missense	c.562	p.D188N	1.000	NULL	pfam_Cyt_B5,superfamily_Cyt_B5	-	no_errors	PGRMC1	HGNC	ENSG00000101856	355	0	0.00	271	34	11.15	-	-	-
SEPT9	0	genome.wustl.edu	37	17	75471846	75471846	+	Silent	SNP	C	C	T			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	17	75471846	75471846	C	T	SNP	SEPT9	ENST00000427180	human	ensembl	69_37n	+1	known	silent	c.246	p.H82	0.000	NULL	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,pfam_AIG1,pfam_ProtSyn_GTP-bd	-	no_errors	SEPT9	HGNC	ENSG00000184640	81	0	0.00	70	11	13.58	-	-	-
UGT2A3	0	genome.wustl.edu	37	4	69817413	69817413	+	Silent	SNP	G	G	A			TCGA-BH-A1EW-01A-11D-A135-09	TCGA-BH-A1EW-11B-33D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6f4b1b6-a8dd-4a9a-a500-b14a738fe18f	f82dbed7-9803-4143-8b84-e8beb908c205	4	69817413	69817413	G	A	SNP	UGT2A3	ENST00000251566	human	ensembl	69_37n	-1	known	silent	c.66	p.F22	0.000	NULL	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2A3	HGNC	ENSG00000135220	105	0	0.00	84	17	16.83	-	-	-
