Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACAD11	0	genome.wustl.edu	37	3	132378481	132378481	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	3	132378481	132378481	C	T	SNP	ACAD11	ENST00000264990	human	ensembl	69_37n	-1	known	missense	c.115	p.E39K	0.000	superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,pfam_Acyl-CoA_Oxase/DH_1,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,pfam_Acyl-CoA_DH_N,superfamily_AcylCoA_DH/oxidase,superfamily_AcylCo_DH/oxidase_C,superfamily_Kinase-like_dom	-	no_errors	ACAD11	HGNC	ENSG00000240303	59	0	0.00	36	20	35.71	-	-	-
ACADS	0	genome.wustl.edu	37	12	121177129	121177129	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	12	121177129	121177129	G	T	SNP	ACADS	ENST00000242592	human	ensembl	69_37n	+1	known	missense	c.1117	p.V373L	1.000	pfam_Acyl-CoA_Oxase/DH_1,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCo_DH/oxidase_C	pfam_Acyl-CoA_Oxase/DH_1,pfam_Acyl-CoA_DH_N,pfam_Acyl-CoA_DH_2_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACADS	HGNC	ENSG00000122971	48	0	0.00	19	5	20.83	-	-	-
ACO1	0	genome.wustl.edu	37	9	32427427	32427427	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	9	32427427	32427427	C	T	SNP	ACO1	ENST00000309951	human	ensembl	69_37n	+1	known	nonsense	c.1477	p.Q493*	0.991	pfam_Acoase/IPM_deHydtase_lsu_aba,superfamily_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	ACO1	HGNC	ENSG00000122729	183	0	0.00	113	59	34.30	-	-	-
ACSL5	0	genome.wustl.edu	37	10	114172996	114172996	+	Silent	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	10	114172996	114172996	C	T	SNP	ACSL5	ENST00000356116	human	ensembl	69_37n	+1	known	silent	c.1182	p.D394	0.978	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL5	HGNC	ENSG00000197142	107	0	0.00	85	15	15.00	-	-	-
AHNAK	0	genome.wustl.edu	37	11	62288755	62288755	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	11	62288755	62288755	C	T	SNP	AHNAK	ENST00000378024	human	ensembl	69_37n	-1	known	missense	c.13134	p.M4378I	1.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	106	0	0.00	64	39	37.86	-	-	-
ATAD2B	0	genome.wustl.edu	37	2	24092590	24092590	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	2	24092590	24092590	G	A	SNP	ATAD2B	ENST00000238789	human	ensembl	69_37n	-1	known	missense	c.1019	p.S340F	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778	87	0	0.00	56	28	33.33	-	-	-
BAG1	0	genome.wustl.edu	37	9	33261117	33261117	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	9	33261117	33261117	C	T	SNP	BAG1	ENST00000472232	human	ensembl	69_37n	-1	known	missense	c.631	p.D211N	0.998	pfam_Ubiquitin,smart_Ubiquitin,pfscan_Ubiquitin_supergroup	pfam_BAG_domain,pfam_Ubiquitin,smart_Ubiquitin,smart_BAG_domain,pfscan_BAG_domain,pfscan_Ubiquitin_supergroup	-	no_errors	BAG1	HGNC	ENSG00000107262	31	0	0.00	25	4	13.79	-	-	-
C2orf69	0	genome.wustl.edu	37	2	200790463	200790463	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	2	200790463	200790463	G	A	SNP	C2orf69	ENST00000319974	human	ensembl	69_37n	+1	known	missense	c.1012	p.D338N	1.000	pfam_UPF0565	pfam_UPF0565	-	no_errors	C2orf69	HGNC	ENSG00000178074	43	0	0.00	39	8	17.02	-	-	-
C2orf69	0	genome.wustl.edu	37	2	200790577	200790577	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	2	200790577	200790577	G	C	SNP	C2orf69	ENST00000319974	human	ensembl	69_37n	+1	known	missense	c.1126	p.E376Q	1.000	NULL	pfam_UPF0565	-	no_errors	C2orf69	HGNC	ENSG00000178074	45	0	0.00	39	8	17.02	-	-	-
CAPN1	0	genome.wustl.edu	37	11	64974024	64974024	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	11	64974024	64974024	G	A	SNP	CAPN1	ENST00000279247	human	ensembl	69_37n	+1	known	missense	c.1444	p.E482K	1.000	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_HAND_2,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN1	HGNC	ENSG00000014216	86	0	0.00	94	28	22.95	-	-	-
CCDC129	0	genome.wustl.edu	37	7	31594131	31594131	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	7	31594131	31594131	G	A	SNP	CCDC129	ENST00000451887	human	ensembl	69_37n	+1	known	missense	c.284	p.G95E	1.000	NULL	NULL	-	no_errors	CCDC129	HGNC	ENSG00000180347	33	0	0.00	16	6	27.27	-	-	-
CDH4	0	genome.wustl.edu	37	20	60485538	60485538	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	20	60485538	60485538	G	A	SNP	CDH4	ENST00000360469	human	ensembl	69_37n	+1	known	missense	c.1249	p.D417N	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242	29	0	0.00	40	13	24.53	-	-	-
CYP4F30P	0	genome.wustl.edu	37	2	131438382	131438382	+	RNA	SNP	G	G	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	2	131438382	131438382	G	C	SNP	CYP4F30P	ENST00000397485	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	CYP4F30P	HGNC	ENSG00000214081	37	0	0.00	30	4	11.76	-	-	-
DBX2	0	genome.wustl.edu	37	12	45429829	45429829	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	12	45429829	45429829	G	A	SNP	DBX2	ENST00000332700	human	ensembl	69_37n	-1	known	missense	c.472	p.R158C	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DBX2	HGNC	ENSG00000185610	41	0	0.00	32	21	39.62	-	-	-
DISP1	0	genome.wustl.edu	37	1	223176237	223176237	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	1	223176237	223176237	C	T	SNP	DISP1	ENST00000284476	human	ensembl	69_37n	+1	known	missense	c.1498	p.L500F	1.000	pfam_Patched	pfam_Patched,pfam_MMPL-typ,pfscan_SSD	-	no_errors	DISP1	HGNC	ENSG00000154309	84	0	0.00	81	28	25.45	-	-	-
DNAJB13	0	genome.wustl.edu	37	11	73675980	73675980	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	11	73675980	73675980	G	C	SNP	DNAJB13	ENST00000339764	human	ensembl	69_37n	+1	known	missense	c.392	p.R131P	1.000	NULL	pfam_DnaJ_C,pfam_DnaJ_N,superfamily_DnaJ_N,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_N,prints_Hsp_DnaJ,pfscan_DnaJ_N	-	no_errors	DNAJB13	HGNC	ENSG00000187726	48	0	0.00	18	16	47.06	-	-	-
DNM3OS	0	genome.wustl.edu	37	1	172113818	172113818	+	RNA	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	1	172113818	172113818	G	A	SNP	DNM3OS	ENST00000417354	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	DNM3OS	HGNC	ENSG00000230630	46	0	0.00	44	16	26.67	-	-	-
DPYSL3	0	genome.wustl.edu	37	5	146778797	146778797	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	5	146778797	146778797	C	T	SNP	DPYSL3	ENST00000398514	human	ensembl	69_37n	-1	known	missense	c.1129	p.E377K	1.000	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL3	HGNC	ENSG00000113657	76	0	0.00	34	5	12.82	-	-	-
DSN1	0	genome.wustl.edu	37	20	35386557	35386557	+	Missense_Mutation	SNP	A	A	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	20	35386557	35386557	A	C	SNP	DSN1	ENST00000373745	human	ensembl	69_37n	-1	known	missense	c.658	p.L220V	0.998	pfam_Mtw1_DSN1	pfam_Mtw1_DSN1	-	no_errors	DSN1	HGNC	ENSG00000149636	22	0	0.00	12	7	36.84	-	-	-
F8	0	genome.wustl.edu	37	X	154157956	154157956	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	X	154157956	154157956	G	T	SNP	F8	ENST00000360256	human	ensembl	69_37n	-1	known	missense	c.4109	p.T1370N	0.000	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	87	0	0.00	63	41	39.42	-	-	-
FAM175B	0	genome.wustl.edu	37	10	126519945	126519945	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	10	126519945	126519945	G	A	SNP	FAM175B	ENST00000298492	human	ensembl	69_37n	+1	known	missense	c.691	p.E231K	1.000	NULL	prints_FAM175_BRISC_cplx_Abro1_su,prints_FAM175	-	no_errors	FAM175B	HGNC	ENSG00000165660	65	0	0.00	51	9	15.00	-	-	-
FGFR1OP2	0	genome.wustl.edu	37	12	27107176	27107176	+	Silent	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	12	27107176	27107176	C	T	SNP	FGFR1OP2	ENST00000229395	human	ensembl	69_37n	+1	known	silent	c.85	p.L29	1.000	pfam_SIKE	pfam_SIKE,superfamily_DNA-bd_dom_put	-	no_errors	FGFR1OP2	HGNC	ENSG00000111790	64	0	0.00	43	19	30.65	-	-	-
GNL2	0	genome.wustl.edu	37	1	38061424	38061424	+	RNA	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	1	38061424	38061424	C	T	SNP	GNL2	ENST00000488496	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	GNL2	HGNC	ENSG00000134697	84	0	0.00	48	21	30.43	-	-	-
IGF2R	0	genome.wustl.edu	37	6	160477534	160477534	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	6	160477534	160477534	C	T	SNP	IGF2R	ENST00000356956	human	ensembl	69_37n	+1	known	nonsense	c.2773	p.Q925*	0.000	pfam_CIMR	pfam_CIMR,pfam_FN_type2_col-bd,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	-	no_errors	IGF2R	HGNC	ENSG00000197081	38	0	0.00	47	7	12.96	-	-	-
IL32	0	genome.wustl.edu	37	16	3131810	3131810	+	Silent	SNP	T	T	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	16	3131810	3131810	T	C	SNP	IL32	ENST00000525377	human	ensembl	69_37n	+1	putative	silent	c.516	p.V172	0.000	NULL	NULL	-	no_stop_codon:bad_bp_length_for_coding_region	IL32	HGNC	ENSG00000008517	18	0	0.00	29	9	23.68	-	-	-
IMPG1	0	genome.wustl.edu	37	6	76640797	76640797	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	6	76640797	76640797	C	T	SNP	IMPG1	ENST00000369950	human	ensembl	69_37n	-1	known	missense	c.2116	p.E706K	0.420	pfscan_EG-like_dom	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	IMPG1	HGNC	ENSG00000112706	52	0	0.00	41	12	22.64	-	-	-
KIAA1009	0	genome.wustl.edu	37	6	84884479	84884479	+	Missense_Mutation	SNP	T	T	G			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	6	84884479	84884479	T	G	SNP	KIAA1009	ENST00000403245	human	ensembl	69_37n	-1	known	missense	c.1992	p.K664N	0.002	NULL	NULL	-	no_errors	KIAA1009	HGNC	ENSG00000135315	70	0	0.00	38	8	17.39	-	-	-
KIF1A	0	genome.wustl.edu	37	2	241696840	241696841	+	In_Frame_Ins	INS	-	-	TCC			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	2	241696840	241696841	-	TCC	INS	KIF1A	ENST00000498729	human	ensembl	69_37n	-1	known	in_frame_ins	c.2754_2753	p.918in_frame_insE	1.000:1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,prints_Kinesin_motor_dom,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294	23	0	0.00	14	6	30.00	-	-	-
LCP1	0	genome.wustl.edu	37	13	46705069	46705069	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	13	46705069	46705069	G	A	SNP	LCP1	ENST00000323076	human	ensembl	69_37n	-1	known	missense	c.1631	p.P544L	0.001	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_EF-hand,pfam_CAMSAP_CH,superfamily_CH-domain,smart_EF_hand_Ca-bd,smart_CH-domain,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	LCP1	HGNC	ENSG00000136167	38	0	0.00	14	4	22.22	-	-	-
LILRA4	0	genome.wustl.edu	37	19	54848842	54848842	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	19	54848842	54848842	C	T	SNP	LILRA4	ENST00000291759	human	ensembl	69_37n	-1	known	missense	c.781	p.D261N	0.000	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like	-	no_errors	LILRA4	HGNC	ENSG00000239961	62	0	0.00	79	20	20.20	-	-	-
LTK	0	genome.wustl.edu	37	15	41804458	41804458	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	15	41804458	41804458	G	A	SNP	LTK	ENST00000263800	human	ensembl	69_37n	-1	known	missense	c.365	p.S122L	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LTK	HGNC	ENSG00000062524	19	0	0.00	20	12	37.50	-	-	-
MAP9	0	genome.wustl.edu	37	4	156289820	156289820	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	4	156289820	156289820	G	C	SNP	MAP9	ENST00000311277	human	ensembl	69_37n	-1	known	missense	c.626	p.S209C	0.000	NULL	NULL	-	no_errors	MAP9	HGNC	ENSG00000164114	175	0	0.00	122	17	12.23	-	-	-
MED23	0	genome.wustl.edu	37	6	131925356	131925356	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	6	131925356	131925356	T	C	SNP	MED23	ENST00000368058	human	ensembl	69_37n	-1	known	missense	c.1736	p.Y579C	1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282	29	0	0.00	8	14	63.64	-	-	-
MEPE	0	genome.wustl.edu	37	4	88767897	88767897	+	RNA	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	4	88767897	88767897	G	A	SNP	MEPE	ENST00000508016	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MEPE	HGNC	ENSG00000152595	49	0	0.00	33	7	17.50	-	-	-
MIR2113	0	genome.wustl.edu	37	6	98472424	98472424	+	RNA	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	6	98472424	98472424	G	A	SNP	MIR2113	ENST00000459007	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR2113	HGNC	ENSG00000238367	32	0	0.00	22	23	51.11	-	-	-
MSX1	0	genome.wustl.edu	37	4	4864568	4864568	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	4	4864568	4864568	G	T	SNP	MSX1	ENST00000382723	human	ensembl	69_37n	+1	known	nonsense	c.610	p.E204*	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	MSX1	HGNC	ENSG00000163132	48	0	0.00	32	51	61.45	-	-	-
MTG1	0	genome.wustl.edu	37	10	135233088	135233088	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	10	135233088	135233088	C	T	SNP	MTG1	ENST00000317502	human	ensembl	69_37n	+1	known	missense	c.857	p.T286M	0.892	pirsf_GTPase_MTG1,tigrfam_GTP-bd_ribosome_bgen_YlqF	pfam_GTP_binding_domain,pirsf_GTPase_MTG1,tigrfam_GTP-bd_ribosome_bgen_YlqF	-	no_errors	MTG1	Clone_based_vega_gene	ENSG00000148824	30	0	0.00	41	11	21.15	-	-	-
MUC12	0	genome.wustl.edu	37	7	100647819	100647819	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	7	100647819	100647819	C	T	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.14404	p.H4802Y	0.002	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	75	0	0.00	70	8	10.26	-	-	-
MYCT1	0	genome.wustl.edu	37	6	153043257	153043257	+	Missense_Mutation	SNP	T	T	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	6	153043257	153043257	T	A	SNP	MYCT1	ENST00000367245	human	ensembl	69_37n	+1	known	missense	c.577	p.S193T	0.945	NULL	NULL	-	no_errors	MYCT1	HGNC	ENSG00000120279	55	0	0.00	30	14	31.82	-	-	-
MYCT1	0	genome.wustl.edu	37	6	153043356	153043356	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	6	153043356	153043356	G	A	SNP	MYCT1	ENST00000367245	human	ensembl	69_37n	+1	known	missense	c.676	p.E226K	1.000	NULL	NULL	-	no_errors	MYCT1	HGNC	ENSG00000120279	39	0	0.00	21	16	43.24	-	-	-
OR2G2	0	genome.wustl.edu	37	1	247752099	247752099	+	Silent	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	1	247752099	247752099	C	T	SNP	OR2G2	ENST00000320065	human	ensembl	69_37n	+1	known	silent	c.438	p.A146	0.001	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2G2	HGNC	ENSG00000177489	34	0	0.00	39	6	13.33	-	-	-
OTOF	0	genome.wustl.edu	37	2	26781363	26781363	+	Missense_Mutation	SNP	C	C	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	2	26781363	26781363	C	A	SNP	OTOF	ENST00000272371	human	ensembl	69_37n	-1	known	missense	c.77	p.R26L	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	OTOF	HGNC	ENSG00000115155	75	0	0.00	62	57	47.90	-	-	-
PCDHA2	0	genome.wustl.edu	37	5	140176058	140176058	+	Silent	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	5	140176058	140176058	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	69_37n	+1	known	silent	c.1509	p.A503	0.047	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969	113	0	0.00	104	49	32.03	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	61	0	0.00	27	28	50.91	-	-	-
PLCB1	0	genome.wustl.edu	37	20	8665692	8665692	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	20	8665692	8665692	T	C	SNP	PLCB1	ENST00000338037	human	ensembl	69_37n	+1	known	missense	c.976	p.F326L	1.000	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C,pfscan_PLipase_C_PInositol-sp_X_dom	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_Ca-dep,prints_Pinositol_PLipase_C,pfscan_C2_membr_targeting,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB1	HGNC	ENSG00000182621	52	0	0.00	30	7	18.92	-	-	-
PRKCB	0	genome.wustl.edu	37	16	24226123	24226123	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	16	24226123	24226123	G	A	SNP	PRKCB	ENST00000303531	human	ensembl	69_37n	+1	known	missense	c.2008	p.E670K	1.000	pirsf_Protein_kinase_C_a/b/g	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_Ca-dep,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_Ca-dep,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,prints_DAG/PE-bd,prints_C2_dom,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	PRKCB	HGNC	ENSG00000166501	27	0	0.00	16	7	30.43	-	-	-
SDC1	0	genome.wustl.edu	37	2	20403762	20403762	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	2	20403762	20403762	C	A	SNP	SDC1	ENST00000254351	human	ensembl	69_37n	-1	known	nonsense	c.439	p.E147*	0.936	pfam_Syndecan	pfam_Syndecan,smart_Neurexin-like	-	no_errors	SDC1	HGNC	ENSG00000115884	42	0	0.00	57	60	51.28	-	-	-
SLC5A12	0	genome.wustl.edu	37	11	26720016	26720016	+	Missense_Mutation	SNP	G	G	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	11	26720016	26720016	G	C	SNP	SLC5A12	ENST00000396005	human	ensembl	69_37n	-1	known	missense	c.888	p.I296M	0.969	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A12	HGNC	ENSG00000148942	42	0	0.00	27	8	22.86	-	-	-
SLC6A11	0	genome.wustl.edu	37	3	10960032	10960032	+	Silent	SNP	T	T	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	3	10960032	10960032	T	C	SNP	SLC6A11	ENST00000254488	human	ensembl	69_37n	+1	known	silent	c.1014	p.C338	0.876	pfam_Na/ntran_symport,prints_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,superfamily_S-AdoMet_deCO2ase_core,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT3,pfscan_Na/ntran_symport	-	no_errors	SLC6A11	HGNC	ENSG00000132164	88	0	0.00	137	26	15.95	-	-	-
SLITRK4	0	genome.wustl.edu	37	X	142717799	142717799	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	X	142717799	142717799	G	T	SNP	SLITRK4	ENST00000338017	human	ensembl	69_37n	-1	known	missense	c.1126	p.P376T	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK4	HGNC	ENSG00000179542	61	0	0.00	49	28	36.36	-	-	-
SMAD1	0	genome.wustl.edu	37	4	146467880	146467880	+	Silent	SNP	A	A	G			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	4	146467880	146467880	A	G	SNP	SMAD1	ENST00000302085	human	ensembl	69_37n	+1	known	silent	c.801	p.E267	0.998	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD1	HGNC	ENSG00000170365	55	0	0.00	29	9	23.68	-	-	-
SUDS3	0	genome.wustl.edu	37	12	118839610	118839610	+	Silent	SNP	G	G	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	12	118839610	118839610	G	C	SNP	SUDS3	ENST00000397564	human	ensembl	69_37n	+1	known	silent	c.663	p.L221	1.000	pfam_Sds3	pfam_Sds3	-	no_errors	SUDS3	HGNC	ENSG00000111707	61	0	0.00	49	8	14.04	-	-	-
SULT1B1	0	genome.wustl.edu	37	4	70620409	70620409	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	4	70620409	70620409	G	A	SNP	SULT1B1	ENST00000310613	human	ensembl	69_37n	-1	known	missense	c.256	p.L86F	0.000	pfam_Sulfotransferase_dom	pfam_Sulfotransferase_dom	-	no_errors	SULT1B1	HGNC	ENSG00000173597	39	0	0.00	20	14	41.18	-	-	-
SV2B	0	genome.wustl.edu	37	15	91769555	91769555	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	15	91769555	91769555	G	A	SNP	SV2B	ENST00000330276	human	ensembl	69_37n	+1	known	missense	c.62	p.R21H	0.938	tigrfam_SV2_chordata	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2_chordata	-	no_errors	SV2B	HGNC	ENSG00000185518	37	0	0.00	33	23	41.07	-	-	-
TBC1D2B	0	genome.wustl.edu	37	15	78316777	78316777	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	15	78316777	78316777	A	-	DEL	TBC1D2B	ENST00000300584	human	ensembl	69_37n	-1	known	frame_shift_del	c.1191	p.L398fs	0.007	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Prefoldin,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2B	HGNC	ENSG00000167202	58	0	0.00	51	8	13.56	-	-	-
TCP1	0	genome.wustl.edu	37	6	160210569	160210569	+	RNA	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	6	160210569	160210569	G	A	SNP	TCP1	ENST00000543532	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TCP1	HGNC	ENSG00000120438	51	0	0.00	16	21	56.76	-	-	-
TEX13A	0	genome.wustl.edu	37	X	104464756	104464756	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	X	104464756	104464756	G	A	SNP	TEX13A	ENST00000413579	human	ensembl	69_37n	-1	known	missense	c.326	p.S109L	0.002	NULL	pfam_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	TEX13A	HGNC	ENSG00000133149	58	0	0.00	37	11	22.92	-	-	-
TFR2	0	genome.wustl.edu	37	7	100230904	100230904	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	7	100230904	100230904	G	-	DEL	TFR2	ENST00000223051	human	ensembl	69_37n	-1	known	frame_shift_del	c.674	p.P225fs	0.003	NULL	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	TFR2	HGNC	ENSG00000106327	17	0	0.00	3	2	40.00	-	-	-
TP53	0	genome.wustl.edu	37	17	7577077	7577077	+	Silent	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	17	7577077	7577077	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	silent	c.861	p.E287	0.910	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	58	0	0.00	19	23	54.76	-	-	-
TP53	0	genome.wustl.edu	37	17	7577085	7577085	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	17	7577085	7577085	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.853	p.E285K	0.995	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	54	0	0.00	18	23	56.10	-	-	-
TRPC6	0	genome.wustl.edu	37	11	101342870	101342870	+	Missense_Mutation	SNP	C	C	G			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	11	101342870	101342870	C	G	SNP	TRPC6	ENST00000344327	human	ensembl	69_37n	-1	known	missense	c.2203	p.E735Q	1.000	prints_TRPC_channel,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC6_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC6	HGNC	ENSG00000137672	22	0	0.00	13	10	43.48	-	-	-
TRPM3	0	genome.wustl.edu	37	9	73151240	73151240	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	9	73151240	73151240	C	T	SNP	TRPM3	ENST00000423814	human	ensembl	69_37n	-1	known	missense	c.4834	p.E1612K	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067	86	0	0.00	78	14	15.22	-	-	-
TTC21A	0	genome.wustl.edu	37	3	39180104	39180104	+	Missense_Mutation	SNP	T	T	C			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	3	39180104	39180104	T	C	SNP	TTC21A	ENST00000301819	human	ensembl	69_37n	+1	known	missense	c.3878	p.I1293T	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21A	HGNC	ENSG00000168026	55	0	0.00	40	12	23.08	-	-	-
TTN	0	genome.wustl.edu	37	2	179499204	179499204	+	Missense_Mutation	SNP	C	C	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	2	179499204	179499204	C	T	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.34600	p.A11534T	0.925	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	33	0	0.00	20	6	23.08	-	-	-
USH2A	0	genome.wustl.edu	37	1	215799148	215799148	+	Missense_Mutation	SNP	G	G	T			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	1	215799148	215799148	G	T	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.15656	p.T5219N	1.000	NULL	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	62	0	0.00	54	16	22.86	-	-	-
WNK1	0	genome.wustl.edu	37	12	970325	970325	+	Silent	SNP	C	C	G			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	12	970325	970325	C	G	SNP	WNK1	ENST00000530271	human	ensembl	69_37n	+1	known	silent	c.1767	p.L589	0.681	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	WNK1	HGNC	ENSG00000060237	43	0	0.00	18	8	30.77	-	-	-
ZBTB8OS	0	genome.wustl.edu	37	1	33099302	33099302	+	Missense_Mutation	SNP	G	G	A			TCGA-BH-A5J0-01A-11D-A27P-09	TCGA-BH-A5J0-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b2273518-7fe0-4c1e-85f6-5c5ef7bbdcab	213426e8-ddbf-4920-813e-74f7f68823fe	1	33099302	33099302	G	A	SNP	ZBTB8OS	ENST00000468695	human	ensembl	69_37n	-1	known	missense	c.307	p.H103Y	1.000	pfam_Archease_dom,superfamily_Archease_dom	pfam_Archease_dom,superfamily_Archease_dom	-	no_errors	ZBTB8OS	HGNC	ENSG00000176261	54	0	0.00	30	4	11.76	-	-	-
