Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS16	0	genome.wustl.edu	37	5	5318312	5318312	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	5	5318312	5318312	G	A	SNP	ADAMTS16	ENST00000274181	human	ensembl	69_37n	+1	known	silent	c.3477	p.P1159	0.106	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536	72	0	0.00	91	21	18.75	-	-	-
BCL6	0	genome.wustl.edu	37	3	187451419	187451419	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	187451419	187451419	G	C	SNP	BCL6	ENST00000232014	human	ensembl	69_37n	-1	known	missense	c.63	p.N21K	1.000	superfamily_BTB/POZ_fold	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	BCL6	HGNC	ENSG00000113916	192	0	0.00	201	31	13.36	-	-	-
BRS3	0	genome.wustl.edu	37	X	135574435	135574435	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	X	135574435	135574435	G	A	SNP	BRS3	ENST00000370648	human	ensembl	69_37n	+1	known	silent	c.1101	p.V367	0.036	prints_Bombesin_rcpt_3	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Bombesin_rcpt_3,prints_Bombsn_rcpt,prints_7TM_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	BRS3	HGNC	ENSG00000102239	162	0	0.00	130	24	15.58	-	-	-
C9orf142	0	genome.wustl.edu	37	9	139888077	139888077	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	9	139888077	139888077	G	A	SNP	C9orf142	ENST00000371620	human	ensembl	69_37n	+1	known	missense	c.536	p.R179Q	0.998	NULL	NULL	-	no_errors	C9orf142	HGNC	ENSG00000148362	143	0	0.00	115	32	21.77	-	-	-
C9orf69	0	genome.wustl.edu	37	9	139008534	139008534	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	9	139008534	139008534	A	T	SNP	C9orf69	ENST00000561457	human	ensembl	69_37n	-1	known	missense	c.287	p.V96E	0.996	NULL	NULL	-	no_errors	C9orf69	HGNC	ENSG00000238227	44	0	0.00	32	17	32.69	-	-	-
CARKD	0	genome.wustl.edu	37	13	111274599	111274599	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	13	111274599	111274599	C	T	SNP	CARKD	ENST00000309957	human	ensembl	69_37n	+1	known	missense	c.137	p.S46L	0.020	NULL	pfam_UPF_carb_kinase-rel,tigrfam_UPF_carb_kinase-rel	-	no_errors	CARKD	HGNC	ENSG00000213995	409	0	0.00	320	91	22.14	-	-	-
CCDC141	0	genome.wustl.edu	37	2	179730515	179730515	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	2	179730515	179730515	G	A	SNP	CCDC141	ENST00000420890	human	ensembl	69_37n	-1	known	silent	c.2703	p.A901	0.000	NULL	pfam_Ig_I-set,pfam_Spectrin_repeat,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	CCDC141	HGNC	ENSG00000163492	309	0	0.00	324	62	16.06	-	-	-
CCDC67	0	genome.wustl.edu	37	11	93097377	93097377	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	11	93097377	93097377	C	T	SNP	CCDC67	ENST00000298050	human	ensembl	69_37n	+1	known	nonsense	c.349	p.Q117*	1.000	superfamily_MHC_II-assoc_invariant_trimer	superfamily_MHC_II-assoc_invariant_trimer	-	no_errors	CCDC67	HGNC	ENSG00000165325	264	0	0.00	128	66	34.02	-	-	-
CDH20	0	genome.wustl.edu	37	18	59167643	59167643	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	18	59167643	59167643	C	A	SNP	CDH20	ENST00000262717	human	ensembl	69_37n	+1	known	missense	c.569	p.T190K	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542	341	0	0.00	344	72	17.27	-	-	-
CHPF	0	genome.wustl.edu	37	2	220405780	220405780	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	2	220405780	220405780	C	T	SNP	CHPF	ENST00000243776	human	ensembl	69_37n	-1	known	missense	c.956	p.R319Q	0.873	pfam_Chond_GalNAc	pfam_Chond_GalNAc	-	no_errors	CHPF	HGNC	ENSG00000123989	126	0	0.00	115	25	17.86	-	-	-
DENND1C	0	genome.wustl.edu	37	19	6480063	6480063	+	Splice_Site	SNP	C	C	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	19	6480063	6480063	C	T	SNP	DENND1C	ENST00000381480	human	ensembl	69_37n	-1	known	splice_site	c.18-1	e2-1	0.919	-	-	-	no_errors	DENND1C	HGNC	ENSG00000205744	128	1	0.78	127	36	22.09	-	-	-
DHX30	0	genome.wustl.edu	37	3	47891404	47891404	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	47891404	47891404	C	T	SNP	DHX30	ENST00000445061	human	ensembl	69_37n	+1	known	missense	c.3379	p.R1127W	0.999	NULL	pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX30	HGNC	ENSG00000132153	35	0	0.00	42	5	10.64	-	-	-
DNAJB4	0	genome.wustl.edu	37	1	78481910	78481910	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	1	78481910	78481910	G	A	SNP	DNAJB4	ENST00000370763	human	ensembl	69_37n	+1	known	silent	c.993	p.R331	1.000	superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_C,pfam_DnaJ_N,superfamily_DnaJ_N,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJB4	HGNC	ENSG00000162616	308	1	0.32	230	36	13.53	-	-	-
DYNC1H1	0	genome.wustl.edu	37	14	102452485	102452486	+	Frame_Shift_Ins	INS	-	-	C			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	14	102452485	102452486	-	C	INS	DYNC1H1	ENST00000360184	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1923_1924	p.V643fs	1.000:1.000	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	46	0	0.00	71	10	12.35	-	-	-
FES	0	genome.wustl.edu	37	15	91436887	91436887	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	15	91436887	91436887	C	A	SNP	FES	ENST00000328850	human	ensembl	69_37n	+1	known	missense	c.2049	p.D683E	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_FCH,superfamily_Kinase-like_dom,superfamily_t-SNARE,smart_FCH,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH,pfscan_SH2,pfscan_Prot_kinase_cat_dom	-	no_errors	FES	HGNC	ENSG00000182511	45	0	0.00	33	12	26.67	-	-	-
FGF4	0	genome.wustl.edu	37	11	69588113	69588113	+	Silent	SNP	G	G	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	11	69588113	69588113	G	T	SNP	FGF4	ENST00000168712	human	ensembl	69_37n	-1	known	silent	c.585	p.P195	0.999	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_IL1_HBGF	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_GF_heparin-bd,prints_IL1_HBGF	-	no_errors	FGF4	HGNC	ENSG00000075388	334	0	0.00	279	73	20.68	-	-	-
FMO1	0	genome.wustl.edu	37	1	171251383	171251383	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	1	171251383	171251383	C	A	SNP	FMO1	ENST00000354841	human	ensembl	69_37n	+1	known	missense	c.1094	p.T365N	1.000	pfam_Flavin_mOase-like,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO1	HGNC	ENSG00000010932	191	0	0.00	270	51	15.84	-	-	-
GABARAP	0	genome.wustl.edu	37	17	7145570	7145570	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	17	7145570	7145570	T	C	SNP	GABARAP	ENST00000302386	human	ensembl	69_37n	-1	known	missense	c.80	p.D27G	1.000	pfam_Atg8_ubiquitin-like	pfam_Atg8_ubiquitin-like,pfam_Autophagy-rel_prot_12	-	no_errors	GABARAP	HGNC	ENSG00000170296	83	0	0.00	63	17	20.48	-	-	-
GDF6	0	genome.wustl.edu	37	8	97157010	97157010	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	8	97157010	97157010	G	A	SNP	GDF6	ENST00000287020	human	ensembl	69_37n	-1	known	silent	c.1149	p.C383	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF6	HGNC	ENSG00000156466	175	0	0.00	223	56	20.00	-	-	-
HERC1	0	genome.wustl.edu	37	15	63970199	63970199	+	Silent	SNP	G	G	C			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	15	63970199	63970199	G	C	SNP	HERC1	ENST00000443617	human	ensembl	69_37n	-1	known	silent	c.6915	p.P2305	0.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	402	0	0.00	413	92	18.11	-	-	-
HOXB2	0	genome.wustl.edu	37	17	46620904	46620904	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	17	46620904	46620904	C	A	SNP	HOXB2	ENST00000330070	human	ensembl	69_37n	-1	known	missense	c.597	p.K199N	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Homeobox_metazoa,pfscan_Homeodomain	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,prints_Homeobox_metazoa,pfscan_Homeodomain	-	no_errors	HOXB2	HGNC	ENSG00000173917	8	0	0.00	10	4	28.57	-	-	-
IFT81	0	genome.wustl.edu	37	12	110566885	110566885	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	12	110566885	110566885	G	A	SNP	IFT81	ENST00000242591	human	ensembl	69_37n	+1	known	missense	c.379	p.V127I	0.998	NULL	NULL	-	no_errors	IFT81	HGNC	ENSG00000122970	195	0	0.00	177	94	34.69	-	-	-
IGLC7	0	genome.wustl.edu	37	22	23264956	23264956	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	22	23264956	23264956	C	A	SNP	IGLC7	ENST00000390331	human	ensembl	69_37n	+1	known	missense	c.191	p.T64K	0.973	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	IGLC7	HGNC	ENSG00000211685	217	0	0.00	148	41	21.69	-	-	-
IRAK4	0	genome.wustl.edu	37	12	44180307	44180307	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	12	44180307	44180307	G	T	SNP	IRAK4	ENST00000448290	human	ensembl	69_37n	+1	known	missense	c.1294	p.V432F	0.892	pirsf_Interleukin-1_rcpt-assoc_kin4,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Interleukin-1_rcpt-assoc_kin4,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_DEATH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	IRAK4	HGNC	ENSG00000198001	75	0	0.00	78	19	19.59	-	-	-
KBTBD8	0	genome.wustl.edu	37	3	67054333	67054333	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	67054333	67054333	G	A	SNP	KBTBD8	ENST00000417314	human	ensembl	69_37n	+1	known	silent	c.942	p.V314	0.999	pirsf_Kelch-like_gigaxonin	pfam_BACK,pfam_BTB_POZ,pfam_Kelch_1,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD8	HGNC	ENSG00000163376	133	0	0.00	168	32	16.00	-	-	-
KCNK4	0	genome.wustl.edu	37	11	64067025	64067026	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	11	64067025	64067026	-	T	INS	KCNK4	ENST00000394525	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1009_1010	p.D338fs	0.987:1.000	prints_2pore_dom_K_chnl_TRAAK	pfam_Ion_trans_2,prints_2pore_dom_K_chnl_TRAAK,prints_2pore_dom_K_chnl_TREK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK4	HGNC	ENSG00000182450	9	0	0.00	2	2	50.00	-	-	-
KIAA1199	0	genome.wustl.edu	37	15	81176528	81176528	+	Silent	SNP	T	T	C			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	15	81176528	81176528	T	C	SNP	KIAA1199	ENST00000220244	human	ensembl	69_37n	+1	known	silent	c.630	p.Y210	0.125	NULL	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888	239	0	0.00	218	68	23.78	-	-	-
KIAA1257	0	genome.wustl.edu	37	3	128707653	128707653	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	128707653	128707653	A	G	SNP	KIAA1257	ENST00000265068	human	ensembl	69_37n	-1	known	missense	c.371	p.L124P	1.000	NULL	NULL	-	no_errors	KIAA1257	HGNC	ENSG00000114656	469	0	0.00	484	90	15.65	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56160565	56160565	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	5	56160565	56160565	A	C	SNP	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	missense	c.839	p.Q280P	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	117	0	0.00	110	19	14.73	-	-	-
MAP3K1	0	genome.wustl.edu	37	5	56177598	56177598	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	5	56177598	56177598	G	-	DEL	MAP3K1	ENST00000399503	human	ensembl	69_37n	+1	novel	frame_shift_del	c.2571	p.A858fs	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	216	0	0.00	179	45	20.09	-	-	-
MKNK2	0	genome.wustl.edu	37	19	2041144	2041144	+	Silent	SNP	G	G	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	19	2041144	2041144	G	T	SNP	MKNK2	ENST00000250896	human	ensembl	69_37n	-1	known	silent	c.1005	p.A335	0.993	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MKNK2	HGNC	ENSG00000099875	164	0	0.00	221	57	20.50	-	-	-
MYB	0	genome.wustl.edu	37	6	135511399	135511399	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	6	135511399	135511399	G	A	SNP	MYB	ENST00000341911	human	ensembl	69_37n	+1	known	nonsense	c.441	p.W147*	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYB	HGNC	ENSG00000118513	287	0	0.00	234	66	22.00	-	-	-
MYBPC2	0	genome.wustl.edu	37	19	50939058	50939058	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	19	50939058	50939058	G	A	SNP	MYBPC2	ENST00000357701	human	ensembl	69_37n	+1	known	silent	c.135	p.P45	0.117	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYBPC2	HGNC	ENSG00000086967	118	0	0.00	78	20	20.41	-	-	-
MYBPC2	0	genome.wustl.edu	37	19	50964798	50964798	+	Splice_Site	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	19	50964798	50964798	G	A	SNP	MYBPC2	ENST00000357701	human	ensembl	69_37n	+1	known	splice_site	c.2932-1	e25-1	1.000	-	-	-	no_errors	MYBPC2	HGNC	ENSG00000086967	114	0	0.00	114	66	36.67	-	-	-
MYH13	0	genome.wustl.edu	37	17	10213133	10213133	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	17	10213133	10213133	G	A	SNP	MYH13	ENST00000252172	human	ensembl	69_37n	-1	known	silent	c.4671	p.H1557	0.622	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH13	HGNC	ENSG00000006788	118	1	0.84	101	17	14.29	-	-	-
NALCN	0	genome.wustl.edu	37	13	101756927	101756927	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	13	101756927	101756927	A	T	SNP	NALCN	ENST00000251127	human	ensembl	69_37n	-1	known	missense	c.2711	p.M904K	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	265	0	0.00	286	73	20.28	-	-	-
PCNXL3	0	genome.wustl.edu	37	11	65396838	65396838	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	11	65396838	65396838	G	A	SNP	PCNXL3	ENST00000355703	human	ensembl	69_37n	+1	known	missense	c.3952	p.V1318M	1.000	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136	159	0	0.00	118	71	37.57	-	-	-
PDHA2	0	genome.wustl.edu	37	4	96761984	96761984	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	4	96761984	96761984	G	T	SNP	PDHA2	ENST00000295266	human	ensembl	69_37n	+1	known	missense	c.683	p.G228V	1.000	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	-	no_errors	PDHA2	HGNC	ENSG00000163114	352	0	0.00	322	50	13.44	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	273	0	0.00	141	145	50.70	-	-	-
PLEKHG1	0	genome.wustl.edu	37	6	151055039	151055039	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	6	151055039	151055039	G	A	SNP	PLEKHG1	ENST00000358517	human	ensembl	69_37n	+1	known	silent	c.222	p.T74	0.011	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG1	HGNC	ENSG00000120278	76	0	0.00	64	19	22.89	-	-	-
POLR2J4	0	genome.wustl.edu	37	7	44009429	44009429	+	RNA	DEL	A	A	-			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	7	44009429	44009429	A	-	DEL	POLR2J4	ENST00000427076	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	POLR2J4	HGNC	ENSG00000214783	8	0	0.00	3	2	33.33	-	-	-
POLR3B	0	genome.wustl.edu	37	12	106824180	106824180	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	12	106824180	106824180	G	A	SNP	POLR3B	ENST00000228347	human	ensembl	69_37n	+1	known	missense	c.1393	p.V465M	1.000	pfam_RNA_pol_Rpb2_3	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR3B	HGNC	ENSG00000013503	172	0	0.00	197	38	16.17	-	-	-
PRNT	0	genome.wustl.edu	37	20	4713295	4713296	+	Frame_Shift_Ins	INS	-	-	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	20	4713295	4713296	-	A	INS	PRNT	ENST00000326539	human	ensembl	69_37n	-1	known	frame_shift_ins	c.28_27	p.A9fs	0.000:0.002	NULL	NULL	-	no_errors	PRNT	HGNC	ENSG00000180259	387	0	0.00	405	81	16.67	-	-	-
RARS2	0	genome.wustl.edu	37	6	88279250	88279250	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	6	88279250	88279250	G	T	SNP	RARS2	ENST00000369536	human	ensembl	69_37n	-1	known	missense	c.95	p.P32Q	0.996	superfamily_Arg-tRNA-synth_N,tigrfam_Arg-tRNA-synth_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-synth_Ia	-	no_errors	RARS2	HGNC	ENSG00000146282	478	0	0.00	354	71	16.71	-	-	-
RNF103	0	genome.wustl.edu	37	2	86832076	86832076	+	Silent	SNP	C	C	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	2	86832076	86832076	C	T	SNP	RNF103	ENST00000237455	human	ensembl	69_37n	-1	known	silent	c.948	p.L316	1.000	superfamily_Thioredoxin-like_fold	pfam_Znf_C3HC4_RING-type,superfamily_Thioredoxin-like_fold,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF103	HGNC	ENSG00000239305	335	0	0.00	251	44	14.86	-	-	-
ROBO2	0	genome.wustl.edu	37	3	77623847	77623847	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	77623847	77623847	T	G	SNP	ROBO2	ENST00000461745	human	ensembl	69_37n	+1	known	missense	c.2169	p.D723E	0.996	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	ROBO2	HGNC	ENSG00000185008	91	0	0.00	63	27	30.00	-	-	-
RRP1	0	genome.wustl.edu	37	21	45217847	45217847	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	21	45217847	45217847	C	T	SNP	RRP1	ENST00000497547	human	ensembl	69_37n	+1	known	missense	c.677	p.P226L	0.990	NULL	pfam_Nop52	-	no_errors	RRP1	HGNC	ENSG00000160214	150	0	0.00	97	55	35.95	-	-	-
SBF2	0	genome.wustl.edu	37	11	9989966	9989966	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	11	9989966	9989966	T	A	SNP	SBF2	ENST00000256190	human	ensembl	69_37n	-1	known	missense	c.1522	p.N508Y	1.000	NULL	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotub-related,pfam_dDENN_dom,pfam_Pleckstrin_homology,pfam_GRAM,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF2	HGNC	ENSG00000133812	281	0	0.00	261	48	15.53	-	-	-
SLC16A12	0	genome.wustl.edu	37	10	91198855	91198855	+	Silent	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	10	91198855	91198855	G	A	SNP	SLC16A12	ENST00000371790	human	ensembl	69_37n	-1	known	silent	c.534	p.I178	0.937	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A12	HGNC	ENSG00000152779	74	0	0.00	61	11	15.28	-	-	-
SLC5A9	0	genome.wustl.edu	37	1	48703432	48703432	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	1	48703432	48703432	C	A	SNP	SLC5A9	ENST00000236495	human	ensembl	69_37n	+1	known	missense	c.1449	p.D483E	1.000	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A9	HGNC	ENSG00000117834	228	0	0.00	244	60	19.74	-	-	-
SRGAP3	0	genome.wustl.edu	37	3	9027246	9027246	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	9027246	9027246	T	C	SNP	SRGAP3	ENST00000383836	human	ensembl	69_37n	-1	known	missense	c.3257	p.K1086R	1.000	NULL	pfam_RhoGAP_dom,pfam_FCH,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_FCH,smart_RhoGAP_dom,smart_SH3_domain,pfscan_FCH,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	SRGAP3	HGNC	ENSG00000196220	20	0	0.00	30	7	18.92	-	-	-
TAF3	0	genome.wustl.edu	37	10	8006835	8006835	+	Silent	SNP	C	C	G			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	10	8006835	8006835	C	G	SNP	TAF3	ENST00000344293	human	ensembl	69_37n	+1	known	silent	c.1362	p.S454	0.065	NULL	pfam_BTP,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Histone-fold,smart_BTP,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	TAF3	HGNC	ENSG00000165632	101	0	0.00	68	31	31.00	-	-	-
TAOK3	0	genome.wustl.edu	37	12	118590144	118590144	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	12	118590144	118590144	A	G	SNP	TAOK3	ENST00000392533	human	ensembl	69_37n	-1	known	missense	c.2423	p.L808P	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	TAOK3	HGNC	ENSG00000135090	174	0	0.00	191	54	22.04	-	-	-
TBL1XR1	0	genome.wustl.edu	37	3	176744190	176744190	+	Nonsense_Mutation	SNP	T	T	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	176744190	176744190	T	A	SNP	TBL1XR1	ENST00000430069	human	ensembl	69_37n	-1	known	nonsense	c.1489	p.K497*	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TBL1XR1	HGNC	ENSG00000177565	535	0	0.00	583	106	15.34	-	-	-
TBL1XR1	0	genome.wustl.edu	37	3	176771659	176771659	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	3	176771659	176771659	G	A	SNP	TBL1XR1	ENST00000430069	human	ensembl	69_37n	-1	known	nonsense	c.106	p.Q36*	1.000	smart_LisH_dimerisation,pfscan_LisH_dimerisation	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TBL1XR1	HGNC	ENSG00000177565	381	0	0.00	382	84	18.03	-	-	-
TLN2	0	genome.wustl.edu	37	15	63102180	63102180	+	Silent	SNP	C	C	T			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	15	63102180	63102180	C	T	SNP	TLN2	ENST00000306829	human	ensembl	69_37n	+1	known	silent	c.6720	p.F2240	0.567	NULL	pfam_Talin_cent,pfam_ILWEQ,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ,pfscan_FERM_domain,pfscan_ILWEQ	-	no_errors	TLN2	HGNC	ENSG00000171914	215	0	0.00	250	39	13.36	-	-	-
USP6	0	genome.wustl.edu	37	17	5072218	5072218	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	17	5072218	5072218	G	A	SNP	USP6	ENST00000250066	human	ensembl	69_37n	+1	known	missense	c.3385	p.E1129K	0.949	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Peptidase_C19	-	no_errors	USP6	HGNC	ENSG00000129204	223	0	0.00	185	47	20.26	-	-	-
ZFHX3	0	genome.wustl.edu	37	16	72830186	72830186	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	16	72830186	72830186	T	C	SNP	ZFHX3	ENST00000268489	human	ensembl	69_37n	-1	known	missense	c.6395	p.Y2132C	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836	61	0	0.00	25	12	32.43	-	-	-
ZFYVE27	0	genome.wustl.edu	37	10	99502856	99502856	+	Frame_Shift_Del	DEL	A	A	-			TCGA-E2-A15G-01A-11D-A12B-09	TCGA-E2-A15G-10A-01D-A12B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d45bb60a-e73b-4b95-8637-e8d17fcca745	9b5d1a2f-ccca-45de-b995-85754015b39c	10	99502856	99502856	A	-	DEL	ZFYVE27	ENST00000356257	human	ensembl	69_37n	+1	known	frame_shift_del	c.203	p.Q68fs	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE27	HGNC	ENSG00000155256	430	0	0.00	461	88	15.83	-	-	-
