Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACTR5	0	genome.wustl.edu	37	20	37380924	37380924	+	Silent	SNP	C	C	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	20	37380924	37380924	C	A	SNP	ACTR5	ENST00000243903	human	ensembl	69_37n	+1	known	silent	c.756	p.I252	0.010	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like	-	no_errors	ACTR5	HGNC	ENSG00000101442	62	0	0.00	50	7	12.28	-	-	-
ANKRD44	0	genome.wustl.edu	37	2	197865158	197865158	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	2	197865158	197865158	C	G	SNP	ANKRD44	ENST00000328737	human	ensembl	69_37n	-1	known	missense	c.2429	p.R810T	0.486	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD44	HGNC	ENSG00000065413	104	0	0.00	69	20	22.47	-	-	-
APOBR	0	genome.wustl.edu	37	16	28507082	28507082	+	Silent	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	16	28507082	28507082	G	C	SNP	APOBR	ENST00000564831	human	ensembl	69_37n	+1	known	silent	c.720	p.G240	0.003	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	57	0	0.00	52	16	23.53	-	-	-
ATR	0	genome.wustl.edu	37	3	142274964	142274964	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	3	142274964	142274964	T	A	SNP	ATR	ENST00000350721	human	ensembl	69_37n	-1	known	missense	c.2096	p.D699V	1.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	67	0	0.00	54	12	18.18	-	-	-
BACH2	0	genome.wustl.edu	37	6	90660867	90660867	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	6	90660867	90660867	G	A	SNP	BACH2	ENST00000257749	human	ensembl	69_37n	-1	known	missense	c.958	p.P320S	0.273	NULL	pfam_BTB_POZ,pfam_bZIP_1,pfam_bZIP_2,superfamily_BTB/POZ_fold,superfamily_Euk_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH2	HGNC	ENSG00000112182	15	0	0.00	9	4	30.77	-	-	-
BAG4	0	genome.wustl.edu	37	8	38067546	38067546	+	Silent	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	8	38067546	38067546	C	T	SNP	BAG4	ENST00000287322	human	ensembl	69_37n	+1	known	silent	c.909	p.S303	0.377	NULL	pfam_BAG_domain,smart_BAG_domain,pfscan_BAG_domain	-	no_errors	BAG4	HGNC	ENSG00000156735	35	0	0.00	24	10	29.41	-	-	-
BTBD11	0	genome.wustl.edu	37	12	108012010	108012010	+	Silent	SNP	C	C	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	12	108012010	108012010	C	A	SNP	BTBD11	ENST00000280758	human	ensembl	69_37n	+1	known	silent	c.2307	p.A769	0.892	NULL	pfam_Ankyrin_rpt,pfam_BTB_POZ,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,superfamily_Histone-fold,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	BTBD11	HGNC	ENSG00000151136	24	0	0.00	20	8	28.57	-	-	-
C16orf53	0	genome.wustl.edu	37	16	29828128	29828128	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	16	29828128	29828128	G	C	SNP	C16orf53	ENST00000320330	human	ensembl	69_37n	+1	known	missense	c.282	p.E94D	1.000	NULL	NULL	-	no_errors	C16orf53	HGNC	ENSG00000185928	8	0	0.00	6	4	40.00	-	-	-
CA14	0	genome.wustl.edu	37	1	150230552	150230552	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	1	150230552	150230552	T	A	SNP	CA14	ENST00000369111	human	ensembl	69_37n	+1	known	missense	c.29	p.V10E	1.000	NULL	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA14	HGNC	ENSG00000118298	218	0	0.00	150	33	17.93	-	-	-
CPNE1	0	genome.wustl.edu	37	20	34218833	34218833	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	20	34218833	34218833	C	T	SNP	CPNE1	ENST00000317677	human	ensembl	69_37n	-1	known	missense	c.1000	p.D334N	1.000	pfam_Copine,smart_VWF_A	pfam_Copine,pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_VWF_A,pfscan_C2_membr_targeting	-	no_errors	CPNE1	HGNC	ENSG00000214078	86	0	0.00	80	9	10.11	-	-	-
CTNNAL1	0	genome.wustl.edu	37	9	111775599	111775599	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	9	111775599	111775599	G	C	SNP	CTNNAL1	ENST00000325551	human	ensembl	69_37n	-1	known	missense	c.124	p.L42V	0.567	pfam_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	-	no_errors	CTNNAL1	HGNC	ENSG00000119326	14	0	0.00	16	5	23.81	-	-	-
CUL4B	0	genome.wustl.edu	37	X	119673224	119673224	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	119673224	119673224	T	A	SNP	CUL4B	ENST00000404115	human	ensembl	69_37n	-1	known	missense	c.1694	p.K565M	1.000	pfam_Cullin_N,superfamily_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL4B	HGNC	ENSG00000158290	181	0	0.00	121	18	12.95	-	-	-
DNAH12	0	genome.wustl.edu	37	3	57394164	57394164	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	3	57394164	57394164	C	T	SNP	DNAH12	ENST00000351747	human	ensembl	69_37n	-1	known	missense	c.6062	p.R2021H	1.000	pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844	44	0	0.00	41	5	10.87	-	-	-
DOCK11	0	genome.wustl.edu	37	X	117743298	117743298	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	117743298	117743298	G	C	SNP	DOCK11	ENST00000276202	human	ensembl	69_37n	+1	known	missense	c.2935	p.E979Q	1.000	NULL	pfam_DOCK,pfam_DUF3398,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	46	0	0.00	42	5	10.64	-	-	-
DOCK11	0	genome.wustl.edu	37	X	117788579	117788579	+	Silent	SNP	C	C	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	117788579	117788579	C	A	SNP	DOCK11	ENST00000276202	human	ensembl	69_37n	+1	known	silent	c.4710	p.P1570	0.566	NULL	pfam_DOCK,pfam_DUF3398,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	47	0	0.00	28	9	24.32	-	-	-
DOCK11	0	genome.wustl.edu	37	X	117788580	117788580	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	117788580	117788580	G	T	SNP	DOCK11	ENST00000276202	human	ensembl	69_37n	+1	known	missense	c.4711	p.A1571S	0.580	NULL	pfam_DOCK,pfam_DUF3398,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	47	0	0.00	28	9	24.32	-	-	-
EEA1	0	genome.wustl.edu	37	12	93221730	93221732	+	In_Frame_Del	DEL	TTG	TTG	-			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	12	93221730	93221732	TTG	-	DEL	EEA1	ENST00000322349	human	ensembl	69_37n	-1	known	in_frame_del	c.1362_1360	p.Q454in_frame_del	1.000:1.000:1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Znf_C2H2	-	no_errors	EEA1	HGNC	ENSG00000102189	113	0	0.00	98	12	10.71	-	-	-
EIF5B	0	genome.wustl.edu	37	2	100007074	100007074	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	2	100007074	100007074	G	C	SNP	EIF5B	ENST00000289371	human	ensembl	69_37n	+1	known	missense	c.2654	p.G885A	1.000	pfam_Transl_elong_EFTu/EF1A_2	pfam_ProtSyn_GTP-bd,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_init/rib_B-barrel,superfamily_TIF_IF2_dom3,prints_ProtSyn_GTP-bd,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417	86	0	0.00	69	24	25.81	-	-	-
ENSG00000258852	0	genome.wustl.edu	37	17	26691976	26691976	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	17	26691976	26691976	G	A	SNP	ENSG00000258852	ENST00000555059	human	ensembl	69_37n	-1	putative	missense	c.331	p.R111W	0.008	superfamily_Hemopexin/matrixin	pfam_Hemopexin/matrixin_repeat,superfamily_Hemopexin/matrixin	-	no_start_codon	CTB-96E2.2	Clone_based_vega_gene	ENSG00000258852	33	0	0.00	33	5	13.16	-	-	-
EPHA1	0	genome.wustl.edu	37	7	143091403	143091403	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	7	143091403	143091403	C	G	SNP	EPHA1	ENST00000275815	human	ensembl	69_37n	-1	known	missense	c.2386	p.E796Q	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom	-	no_errors	EPHA1	HGNC	ENSG00000146904	78	0	0.00	56	14	20.00	-	-	-
FLRT3	0	genome.wustl.edu	37	20	14307453	14307453	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	20	14307453	14307453	G	A	SNP	FLRT3	ENST00000341420	human	ensembl	69_37n	-1	known	missense	c.700	p.R234W	0.948	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT3	HGNC	ENSG00000125848	14	0	0.00	10	8	44.44	-	-	-
FMNL2	0	genome.wustl.edu	37	2	153435429	153435429	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	2	153435429	153435429	C	G	SNP	FMNL2	ENST00000288670	human	ensembl	69_37n	+1	known	missense	c.733	p.P245A	1.000	pfam_Drf_GTPase-bd,superfamily_ARM-type_fold	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,superfamily_FH2_actin-bd,superfamily_ARM-type_fold,smart_Actin-bd_FH2/DRF_autoreg,prints_Wilms_tumour	-	no_errors	FMNL2	HGNC	ENSG00000157827	76	0	0.00	47	15	24.19	-	-	-
FSTL4	0	genome.wustl.edu	37	5	132652191	132652191	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	5	132652191	132652191	G	C	SNP	FSTL4	ENST00000265342	human	ensembl	69_37n	-1	known	missense	c.563	p.A188G	0.000	pfscan_EF_HAND_2	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Kazal-type_dom,pfam_Prot_inh_Kazal,smart_Prot_inh_Kazal,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_HAND_2,pfscan_Ig-like	-	no_errors	FSTL4	HGNC	ENSG00000053108	40	0	0.00	40	15	27.27	-	-	-
GH1	0	genome.wustl.edu	37	17	61994783	61994783	+	Silent	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	17	61994783	61994783	G	A	SNP	GH1	ENST00000323322	human	ensembl	69_37n	-1	known	silent	c.540	p.D180	0.648	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	GH1	HGNC	ENSG00000259384	286	0	0.00	167	90	35.02	-	-	-
GPRASP1	0	genome.wustl.edu	37	X	101910990	101910990	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	101910990	101910990	G	A	SNP	GPRASP1	ENST00000361600	human	ensembl	69_37n	+1	known	missense	c.2149	p.E717K	0.035	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP1	HGNC	ENSG00000198932	61	0	0.00	52	6	10.34	-	-	-
HRNR	0	genome.wustl.edu	37	1	152192919	152192919	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	1	152192919	152192919	G	A	SNP	HRNR	ENST00000368801	human	ensembl	69_37n	-1	known	nonsense	c.1186	p.Q396*	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	HRNR	HGNC	ENSG00000197915	133	0	0.00	106	24	18.46	-	-	-
KIAA0947	0	genome.wustl.edu	37	5	5464537	5464537	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	5	5464537	5464537	C	T	SNP	KIAA0947	ENST00000296564	human	ensembl	69_37n	+1	known	missense	c.5090	p.S1697F	0.053	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	39	0	0.00	33	4	10.81	-	-	-
KSR2	0	genome.wustl.edu	37	12	117977596	117977596	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	12	117977596	117977596	T	C	SNP	KSR2	ENST00000339824	human	ensembl	69_37n	-1	known	missense	c.1615	p.S539G	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom	-	no_errors	KSR2	HGNC	ENSG00000171435	202	0	0.00	114	41	26.45	-	-	-
MCC	0	genome.wustl.edu	37	5	112824046	112824048	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	5	112824046	112824048	GCT	-	DEL	MCC	ENST00000408903	human	ensembl	69_37n	-1	putative	in_frame_del	c.66_64	p.S22in_frame_del	0.733:0.827:0.854	NULL	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	MCC	HGNC	ENSG00000171444	14	0	0.00	4	2	33.33	-	-	-
NDUFV3	0	genome.wustl.edu	37	21	44323603	44323603	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	21	44323603	44323603	G	A	SNP	NDUFV3	ENST00000354250	human	ensembl	69_37n	+1	known	missense	c.481	p.D161N	0.802	NULL	NULL	-	no_errors	NDUFV3	HGNC	ENSG00000160194	37	0	0.00	24	6	20.00	-	-	-
NOS1	0	genome.wustl.edu	37	12	117696222	117696222	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	12	117696222	117696222	G	T	SNP	NOS1	ENST00000317775	human	ensembl	69_37n	-1	known	missense	c.2511	p.N837K	1.000	pfam_Flavodoxin/NO_synth,pirsf_NOS_met,pfscan_Flavodoxin/NO_synth	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_met,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250	87	0	0.00	65	12	15.58	-	-	-
OPTN	0	genome.wustl.edu	37	10	13174129	13174129	+	Silent	SNP	A	A	G			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	10	13174129	13174129	A	G	SNP	OPTN	ENST00000263036	human	ensembl	69_37n	+1	known	silent	c.1464	p.E488	1.000	NULL	pfam_NEMO_N	-	no_errors	OPTN	HGNC	ENSG00000123240	106	0	0.00	110	18	14.06	-	-	-
OTOL1	0	genome.wustl.edu	37	3	161221388	161221388	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	3	161221388	161221388	G	T	SNP	OTOL1	ENST00000327928	human	ensembl	69_37n	+1	known	missense	c.1092	p.K364N	0.976	pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	OTOL1	HGNC	ENSG00000182447	57	0	0.00	54	9	14.06	-	-	-
PARP6	0	genome.wustl.edu	37	15	72546845	72546845	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	15	72546845	72546845	C	G	SNP	PARP6	ENST00000287196	human	ensembl	69_37n	-1	known	missense	c.1142	p.R381P	1.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP6	HGNC	ENSG00000137817	95	0	0.00	63	20	24.10	-	-	-
PICALM	0	genome.wustl.edu	37	11	85722144	85722144	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	11	85722144	85722144	C	A	SNP	PICALM	ENST00000393346	human	ensembl	69_37n	-1	known	nonsense	c.694	p.E232*	1.000	pfam_ANTH	pfam_ANTH,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	PICALM	HGNC	ENSG00000073921	151	0	0.00	99	13	11.61	-	-	-
PIK3CD	0	genome.wustl.edu	37	1	9781585	9781585	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	1	9781585	9781585	T	C	SNP	PIK3CD	ENST00000536656	human	ensembl	69_37n	+1	known	missense	c.1967	p.F656S	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CD	HGNC	ENSG00000171608	56	0	0.00	32	8	20.00	-	-	-
PLEKHA5	0	genome.wustl.edu	37	12	19460407	19460408	+	RNA	INS	-	-	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	12	19460407	19460408	-	A	INS	PLEKHA5	ENST00000510738	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.923:0.931	-	-	-	no_errors	PLEKHA5	HGNC	ENSG00000052126	19	0	0.00	9	3	25.00	-	-	-
PLP1	0	genome.wustl.edu	37	X	103044308	103044308	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	103044308	103044308	C	A	SNP	PLP1	ENST00000303958	human	ensembl	69_37n	+1	known	missense	c.743	p.A248E	1.000	pfam_Myelin_PLP,prints_Myelin_PLP	pfam_Myelin_PLP,smart_Myelin_PLP,prints_Myelin_PLP	-	no_errors	PLP1	HGNC	ENSG00000123560	270	0	0.00	189	24	11.27	-	-	-
POLR2J3	0	genome.wustl.edu	37	7	102182021	102182021	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	7	102182021	102182021	C	A	SNP	POLR2J3	ENST00000379357	human	ensembl	69_37n	-1	known	missense	c.201	p.Q67H	1.000	NULL	NULL	-	no_errors	POLR2J3	HGNC	ENSG00000168255	17	0	0.00	18	7	28.00	-	-	-
POM121C	0	genome.wustl.edu	37	7	75050891	75050891	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	7	75050891	75050891	T	C	SNP	POM121C	ENST00000257665	human	ensembl	69_37n	-1	known	missense	c.3370	p.T1124A	0.001	NULL	NULL	-	no_errors	POM121C	HGNC	ENSG00000135213	34	0	0.00	26	4	13.33	-	-	-
PQBP1	0	genome.wustl.edu	37	X	48759291	48759291	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	48759291	48759291	G	C	SNP	PQBP1	ENST00000456306	human	ensembl	69_37n	+1	known	missense	c.230	p.R77P	0.999	NULL	pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,pfscan_WW_Rsp5_WWP	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PQBP1	HGNC	ENSG00000102103	66	0	0.00	59	14	18.92	-	-	-
PRTG	0	genome.wustl.edu	37	15	55912380	55912380	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	15	55912380	55912380	G	T	SNP	PRTG	ENST00000389286	human	ensembl	69_37n	-1	known	missense	c.3283	p.P1095T	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	PRTG	HGNC	ENSG00000166450	79	0	0.00	50	11	18.03	-	-	-
PTPRK	0	genome.wustl.edu	37	6	128404925	128404925	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	6	128404925	128404925	C	A	SNP	PTPRK	ENST00000368227	human	ensembl	69_37n	-1	known	nonsense	c.1510	p.E504*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRK	HGNC	ENSG00000152894	100	0	0.00	81	9	10.00	-	-	-
PXK	0	genome.wustl.edu	37	3	58368396	58368396	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	3	58368396	58368396	A	C	SNP	PXK	ENST00000356151	human	ensembl	69_37n	+1	known	missense	c.357	p.L119F	0.999	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox,pfscan_Prot_kinase_cat_dom	pfam_Phox,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Phox,superfamily_Kinase-like_dom,smart_Phox,pfscan_Phox,pfscan_WH2_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	PXK	HGNC	ENSG00000168297	61	0	0.00	44	12	21.43	-	-	-
RD3	0	genome.wustl.edu	37	1	211652657	211652657	+	Silent	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	1	211652657	211652657	C	T	SNP	RD3	ENST00000367002	human	ensembl	69_37n	-1	known	silent	c.309	p.L103	0.207	NULL	NULL	-	no_errors	RD3	HGNC	ENSG00000198570	20	0	0.00	18	4	18.18	-	-	-
RNF111	0	genome.wustl.edu	37	15	59323149	59323149	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	15	59323149	59323149	T	A	SNP	RNF111	ENST00000434298	human	ensembl	69_37n	+1	known	missense	c.128	p.I43N	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF111	HGNC	ENSG00000157450	69	0	0.00	47	12	20.34	-	-	-
RNF20	0	genome.wustl.edu	37	9	104315014	104315014	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	9	104315014	104315014	A	G	SNP	RNF20	ENST00000389120	human	ensembl	69_37n	+1	known	missense	c.1880	p.K627R	1.000	NULL	superfamily_STAT_TF_coiled-coil,superfamily_Prefoldin,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF20	HGNC	ENSG00000155827	40	0	0.00	27	14	34.15	-	-	-
RPGR	0	genome.wustl.edu	37	X	38145826	38145826	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	38145826	38145826	T	C	SNP	RPGR	ENST00000378505	human	ensembl	69_37n	-1	known	missense	c.2426	p.E809G	0.349	NULL	pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313	225	1	0.44	288	39	11.93	-	-	-
SCAF11	0	genome.wustl.edu	37	12	46320764	46320764	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	12	46320764	46320764	G	A	SNP	SCAF11	ENST00000369367	human	ensembl	69_37n	-1	known	missense	c.2720	p.S907F	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	SCAF11	HGNC	ENSG00000139218	44	0	0.00	47	16	25.40	-	-	-
SMAD1	0	genome.wustl.edu	37	4	146467997	146467997	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	4	146467997	146467997	G	C	SNP	SMAD1	ENST00000302085	human	ensembl	69_37n	+1	known	missense	c.918	p.K306N	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD1	HGNC	ENSG00000170365	69	0	0.00	64	11	14.67	-	-	-
TAF6	0	genome.wustl.edu	37	7	99711749	99711749	+	Silent	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	7	99711749	99711749	G	A	SNP	TAF6	ENST00000344095	human	ensembl	69_37n	-1	known	silent	c.84	p.I28	0.965	pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_TAF_TATA-bd	pfam_DUF1546,pfam_TAF_TATA-bd,superfamily_Histone-fold,superfamily_ARM-type_fold,smart_TAF_TATA-bd	-	no_errors	TAF6	HGNC	ENSG00000106290	87	0	0.00	51	10	16.39	-	-	-
TAT	0	genome.wustl.edu	37	16	71610261	71610261	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	16	71610261	71610261	C	T	SNP	TAT	ENST00000355962	human	ensembl	69_37n	-1	known	missense	c.58	p.V20M	0.373	pfam_Tyr_aminoTrfase_ubiquitination,pirsf_Tyrosine_transaminase	pfam_Aminotransferase_I/II,pfam_Tyr_aminoTrfase_ubiquitination,pfam_ArAA_b-elim_lyase/Thr_aldolase,pfam_Aminotrans_V/Cys_dSase,pfam_DegT/StrS_aminotransferase,superfamily_PyrdxlP-dep_Trfase_major_dom,pirsf_Tyrosine_transaminase,prints_ACC_synthase,tigrfam_Tyrosine_aminoTrfase,tigrfam_TyrNic_aminoTrfase	-	no_errors	TAT	HGNC	ENSG00000198650	139	0	0.00	85	18	17.48	-	-	-
TBC1D13	0	genome.wustl.edu	37	9	131568232	131568232	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	9	131568232	131568232	G	C	SNP	TBC1D13	ENST00000372648	human	ensembl	69_37n	+1	known	missense	c.1013	p.W338S	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D13	HGNC	ENSG00000107021	46	0	0.00	39	11	22.00	-	-	-
TBC1D2	0	genome.wustl.edu	37	9	101006381	101006381	+	Missense_Mutation	SNP	A	A	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	9	101006381	101006381	A	T	SNP	TBC1D2	ENST00000375066	human	ensembl	69_37n	-1	known	missense	c.542	p.L181Q	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2	HGNC	ENSG00000095383	38	0	0.00	17	10	37.04	-	-	-
TP53	0	genome.wustl.edu	37	17	7578190	7578190	+	Missense_Mutation	SNP	T	T	G			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	17	7578190	7578190	T	G	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.659	p.Y220S	0.998	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	162	1	0.61	91	13	12.50	-	-	-
TP53	0	genome.wustl.edu	37	17	7579414	7579414	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	17	7579414	7579414	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	nonsense	c.273	p.W91*	1.000	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	35	0	0.00	26	10	27.78	-	-	-
TPM2	0	genome.wustl.edu	37	9	35689719	35689719	+	Silent	SNP	A	A	G			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	9	35689719	35689719	A	G	SNP	TPM2	ENST00000378300	human	ensembl	69_37n	-1	known	silent	c.96	p.A32	0.910	NULL	pfam_Tropomyosin,prints_Tropomyosin	-	no_errors	TPM2	HGNC	ENSG00000198467	100	0	0.00	67	16	19.28	-	-	-
TRAF6	0	genome.wustl.edu	37	11	36518707	36518707	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	11	36518707	36518707	T	C	SNP	TRAF6	ENST00000348124	human	ensembl	69_37n	-1	known	missense	c.557	p.Q186R	1.000	superfamily_TRAF-like,pirsf_TNF_rcpt--assoc_TRAF,pfscan_Znf_TRAF	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF6	HGNC	ENSG00000175104	77	0	0.00	61	31	33.70	-	-	-
TRPV2	0	genome.wustl.edu	37	17	16326827	16326827	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	17	16326827	16326827	G	A	SNP	TRPV2	ENST00000338560	human	ensembl	69_37n	+1	known	missense	c.670	p.V224M	0.978	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	-	no_errors	TRPV2	HGNC	ENSG00000187688	38	0	0.00	18	4	18.18	-	-	-
WDR87	0	genome.wustl.edu	37	19	38380815	38380815	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	19	38380815	38380815	C	T	SNP	WDR87	ENST00000447313	human	ensembl	69_37n	-1	known	missense	c.3496	p.A1166T	0.037	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Quinolinate_PRibosylTrfase_C,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR87	HGNC	ENSG00000171804	72	0	0.00	45	14	23.73	-	-	-
WNK3	0	genome.wustl.edu	37	X	54259337	54259337	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	X	54259337	54259337	G	C	SNP	WNK3	ENST00000354646	human	ensembl	69_37n	-1	known	missense	c.4745	p.P1582R	0.999	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	WNK3	HGNC	ENSG00000196632	145	0	0.00	132	23	14.84	-	-	-
XIRP2	0	genome.wustl.edu	37	2	168101752	168101752	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	2	168101752	168101752	T	A	SNP	XIRP2	ENST00000295237	human	ensembl	69_37n	+1	known	missense	c.3850	p.L1284I	0.998	NULL	pfam_Actin-binding_Xin_repeat,superfamily_FH2_actin-bd	-	no_errors	XIRP2	HGNC	ENSG00000163092	69	0	0.00	45	13	22.41	-	-	-
ZFAND1	0	genome.wustl.edu	37	8	82626198	82626198	+	Silent	SNP	C	C	T			TCGA-E9-A243-01A-21D-A167-09	TCGA-E9-A243-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	c6bb16c6-cb0f-44c6-93e7-6c55d0958f82	a7e3e9d1-e371-4d3d-92cd-7985f276f70b	8	82626198	82626198	C	T	SNP	ZFAND1	ENST00000220669	human	ensembl	69_37n	-1	known	silent	c.435	p.L145	0.993	NULL	pfam_Znf_AN1,smart_Znf_AN1,pfscan_Znf_AN1	-	no_errors	ZFAND1	HGNC	ENSG00000104231	303	0	0.00	233	32	12.08	-	-	-
