Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
COL4A2-AS2	0	genome.wustl.edu	37	13	111109461	111109461	+	Missense_Mutation	SNP	A	A	G			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	13	111109461	111109461	A	G	SNP	COL4A2-AS2	ENST00000458403	human	ensembl	69_37n	-1	putative	missense	c.722	p.M241T	0.313	NULL	NULL	-	no_errors	COL4A2-AS2	HGNC	ENSG00000224821	8	0	0.00	6	4	40.00	-	-	-
DNAH3	0	genome.wustl.edu	37	16	21170742	21170742	+	Silent	SNP	G	G	C			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	16	21170742	21170742	G	C	SNP	DNAH3	ENST00000261383	human	ensembl	69_37n	-1	known	silent	c.21	p.L7	0.000	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	49	0	0.00	26	5	16.13	-	-	-
IL11RA	0	genome.wustl.edu	37	9	34655661	34655661	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	9	34655661	34655661	G	A	SNP	IL11RA	ENST00000318041	human	ensembl	69_37n	+1	known	missense	c.160	p.G54R	0.998	smart_Ig_sub,pfscan_Ig-like	superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	IL11RA	HGNC	ENSG00000137070	31	0	0.00	37	10	21.28	-	-	-
MUC12	0	genome.wustl.edu	37	7	100641798	100641798	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	7	100641798	100641798	C	G	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.8383	p.P2795A	0.002	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	22	0	0.00	18	4	18.18	-	-	-
NTRK1	0	genome.wustl.edu	37	1	156834219	156834219	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	1	156834219	156834219	C	G	SNP	NTRK1	ENST00000524377	human	ensembl	69_37n	+1	known	missense	c.286	p.L96V	1.000	prints_Tyr_kinase_NGF_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Cys-rich_flank_reg_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_neurotrophic_rcpt_1,prints_Tyr_kinase_NGF_rcpt	-	no_errors	NTRK1	HGNC	ENSG00000198400	55	0	0.00	81	10	10.99	-	-	-
OR6B2	0	genome.wustl.edu	37	2	240969517	240969517	+	Silent	SNP	G	G	A			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	2	240969517	240969517	G	A	SNP	OR6B2	ENST00000402971	human	ensembl	69_37n	-1	known	silent	c.330	p.T110	0.005	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR6B2	HGNC	ENSG00000182083	19	0	0.00	16	7	30.43	-	-	-
PRMT8	0	genome.wustl.edu	37	12	3686131	3686131	+	Frame_Shift_Del	DEL	G	G	-			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	12	3686131	3686131	G	-	DEL	PRMT8	ENST00000382622	human	ensembl	69_37n	+1	known	frame_shift_del	c.807	p.T270fs	1.000	pfam_Arg_MeTrfase	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT8	HGNC	ENSG00000111218	26	0	0.00	42	6	12.24	-	-	-
TTC14	0	genome.wustl.edu	37	3	180324055	180324055	+	Missense_Mutation	SNP	T	T	C			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	3	180324055	180324055	T	C	SNP	TTC14	ENST00000296015	human	ensembl	69_37n	+1	known	missense	c.944	p.V315A	1.000	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR-1,superfamily_NA-bd_OB-fold-like,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	TTC14	HGNC	ENSG00000163728	98	0	0.00	69	9	11.54	-	-	-
TTN	0	genome.wustl.edu	37	2	179635029	179635029	+	Missense_Mutation	SNP	T	T	A			TCGA-EW-A1P7-01A-21D-A142-09	TCGA-EW-A1P7-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	402abf40-5a01-467d-a5be-b9101743f34b	4b8b9e5a-517f-4c80-862a-032f78617cce	2	179635029	179635029	T	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.8399	p.K2800M	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	48	0	0.00	66	14	17.50	-	-	-
