Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC4	0	genome.wustl.edu	37	13	95847154	95847154	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	13	95847154	95847154	C	T	SNP	ABCC4	ENST00000376887	human	ensembl	69_37n	-1	known	missense	c.1199	p.R400H	0.000	superfamily_ABC_transptrTM_dom_typ1	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257	49	0	0.00	48	9	15.79	-	-	-
ACTR10	0	genome.wustl.edu	37	14	58690363	58690363	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	14	58690363	58690363	C	G	SNP	ACTR10	ENST00000254286	human	ensembl	69_37n	+1	known	missense	c.658	p.L220V	1.000	pfam_Actin-like,smart_Actin-like	pfam_Actin-like,smart_Actin-like	-	no_errors	ACTR10	HGNC	ENSG00000131966	78	0	0.00	68	11	13.58	-	-	-
ANKRD17	0	genome.wustl.edu	37	4	73941980	73941980	+	Missense_Mutation	SNP	T	T	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	4	73941980	73941980	T	A	SNP	ANKRD17	ENST00000358602	human	ensembl	69_37n	-1	known	missense	c.7780	p.M2594L	1.000	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKRD17	HGNC	ENSG00000132466	49	0	0.00	40	5	11.11	-	-	-
ANO2	0	genome.wustl.edu	37	12	5853403	5853403	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	12	5853403	5853403	G	A	SNP	ANO2	ENST00000356134	human	ensembl	69_37n	-1	known	missense	c.1262	p.S421L	0.964	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO2	HGNC	ENSG00000047617	54	0	0.00	69	11	13.75	-	-	-
APC	0	genome.wustl.edu	37	5	112177102	112177102	+	Silent	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	5	112177102	112177102	C	T	SNP	APC	ENST00000257430	human	ensembl	69_37n	+1	known	silent	c.5811	p.S1937	0.998	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	57	0	0.00	51	13	20.31	-	-	-
ATG16L1	0	genome.wustl.edu	37	2	234198929	234198929	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	2	234198929	234198929	G	A	SNP	ATG16L1	ENST00000392017	human	ensembl	69_37n	+1	known	missense	c.1360	p.D454N	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Autophagy-rel_prot_16,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ATG16L1	HGNC	ENSG00000085978	54	0	0.00	84	15	15.15	-	-	-
BRWD3	0	genome.wustl.edu	37	X	79951434	79951434	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	X	79951434	79951434	C	T	SNP	BRWD3	ENST00000373275	human	ensembl	69_37n	-1	known	missense	c.3124	p.E1042K	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quino_amine_DH_bsu,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD3	HGNC	ENSG00000165288	62	0	0.00	45	9	16.67	-	-	-
C21orf59	0	genome.wustl.edu	37	21	33974174	33974174	+	Silent	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	21	33974174	33974174	C	T	SNP	C21orf59	ENST00000290155	human	ensembl	69_37n	-1	known	silent	c.872	p.*291	1.000	NULL	pfam_DUF2870	-	no_errors	C21orf59	HGNC	ENSG00000159079	90	0	0.00	71	13	15.48	-	-	-
DAD1	0	genome.wustl.edu	37	14	23057891	23057891	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	14	23057891	23057891	G	A	SNP	DAD1	ENST00000250498	human	ensembl	69_37n	-1	known	missense	c.173	p.S58L	1.000	pfam_DAD,pirsf_DAD	pfam_DAD,pirsf_DAD	-	no_errors	DAD1	HGNC	ENSG00000129562	25	0	0.00	28	7	20.00	-	-	-
DNAJC14	0	genome.wustl.edu	37	12	56217190	56217190	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	12	56217190	56217190	C	T	SNP	DNAJC14	ENST00000317269	human	ensembl	69_37n	-1	known	missense	c.1510	p.E504K	1.000	pfam_DnaJ_N,pfscan_DnaJ_N	pfam_DnaJ_N,superfamily_DnaJ_N,smart_DnaJ_N,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJC14	HGNC	ENSG00000135392	52	0	0.00	51	7	12.07	-	-	-
DPYSL3	0	genome.wustl.edu	37	5	146804484	146804484	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	5	146804484	146804484	C	T	SNP	DPYSL3	ENST00000398514	human	ensembl	69_37n	-1	known	missense	c.82	p.D28N	1.000	superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL3	HGNC	ENSG00000113657	35	0	0.00	43	5	10.42	-	-	-
FCGBP	0	genome.wustl.edu	37	19	40383905	40383905	+	Silent	SNP	G	G	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	19	40383905	40383905	G	A	SNP	FCGBP	ENST00000221347	human	ensembl	69_37n	-1	known	silent	c.9705	p.C3235	0.488	smart_VWC_out	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	28	0	0.00	22	10	31.25	-	-	-
GRIP1	0	genome.wustl.edu	37	12	66788018	66788018	+	Nonsense_Mutation	SNP	G	G	C			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	12	66788018	66788018	G	C	SNP	GRIP1	ENST00000359742	human	ensembl	69_37n	-1	known	nonsense	c.2099	p.S700*	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRIP1	HGNC	ENSG00000155974	61	0	0.00	64	11	14.67	-	-	-
HIST1H2BC	0	genome.wustl.edu	37	6	26123919	26123919	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	6	26123919	26123919	C	G	SNP	HIST1H2BC	ENST00000314332	human	ensembl	69_37n	-1	known	missense	c.214	p.E72Q	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BC	HGNC	ENSG00000180596	74	0	0.00	81	9	10.00	-	-	-
HTT	0	genome.wustl.edu	37	4	3176466	3176466	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	4	3176466	3176466	G	C	SNP	HTT	ENST00000355072	human	ensembl	69_37n	+1	known	missense	c.4185	p.Q1395H	1.000	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386	80	0	0.00	66	10	13.16	-	-	-
LRP1B	0	genome.wustl.edu	37	2	141356269	141356269	+	Silent	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	2	141356269	141356269	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	69_37n	-1	known	silent	c.7125	p.E2375	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_dom,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	89	0	0.00	77	13	14.44	-	-	-
MYBPC3	0	genome.wustl.edu	37	11	47367798	47367798	+	Silent	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	11	47367798	47367798	C	T	SNP	MYBPC3	ENST00000399249	human	ensembl	69_37n	-1	known	silent	c.1050	p.K350	0.999	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYBPC3	HGNC	ENSG00000134571	43	0	0.00	41	6	12.77	-	-	-
NUP210L	0	genome.wustl.edu	37	1	154062065	154062065	+	Silent	SNP	G	G	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	1	154062065	154062065	G	A	SNP	NUP210L	ENST00000368559	human	ensembl	69_37n	-1	known	silent	c.2193	p.L731	0.997	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	29	0	0.00	37	8	17.78	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	3	178936082	178936082	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1624	p.E542K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	55	0	0.00	37	5	11.90	-	-	-
SLC36A1	0	genome.wustl.edu	37	5	150858892	150858892	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	5	150858892	150858892	C	T	SNP	SLC36A1	ENST00000243389	human	ensembl	69_37n	+1	known	missense	c.1001	p.S334L	0.991	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC36A1	HGNC	ENSG00000123643	52	0	0.00	65	9	12.16	-	-	-
SLC46A3	0	genome.wustl.edu	37	13	29287565	29287565	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	13	29287565	29287565	C	T	SNP	SLC46A3	ENST00000266943	human	ensembl	69_37n	-1	known	missense	c.312	p.M104I	0.316	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC46A3	HGNC	ENSG00000139508	28	0	0.00	31	6	16.22	-	-	-
TMEM120B	0	genome.wustl.edu	37	12	122186340	122186340	+	Silent	SNP	G	G	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	12	122186340	122186340	G	A	SNP	TMEM120B	ENST00000342607	human	ensembl	69_37n	+1	known	silent	c.297	p.K99	1.000	pfam_TMPIT	pfam_TMPIT	-	no_errors	TMEM120B	HGNC	ENSG00000188735	18	0	0.00	27	7	20.59	-	-	-
TMEM120B	0	genome.wustl.edu	37	12	122199562	122199562	+	Missense_Mutation	SNP	G	G	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	12	122199562	122199562	G	T	SNP	TMEM120B	ENST00000342607	human	ensembl	69_37n	+1	known	missense	c.469	p.D157Y	0.997	pfam_TMPIT	pfam_TMPIT	-	no_errors	TMEM120B	HGNC	ENSG00000188735	37	0	0.00	42	7	14.29	-	-	-
TP53	0	genome.wustl.edu	37	17	7577500	7577501	+	Frame_Shift_Ins	INS	-	-	A			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	17	7577500	7577501	-	A	INS	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	frame_shift_ins	c.781_780	p.S260fs	1.000:1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	39	0	0.00	38	6	13.64	-	-	-
TRIM60	0	genome.wustl.edu	37	4	165962158	165962158	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	4	165962158	165962158	G	C	SNP	TRIM60	ENST00000341062	human	ensembl	69_37n	+1	known	missense	c.934	p.E312Q	0.993	superfamily_ConA-like_lec_gl,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM60	HGNC	ENSG00000176979	37	0	0.00	27	4	12.90	-	-	-
USH2A	0	genome.wustl.edu	37	1	215933077	215933077	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	1	215933077	215933077	C	T	SNP	USH2A	ENST00000366943	human	ensembl	69_37n	-1	known	missense	c.11156	p.R3719H	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	61	0	0.00	61	8	11.59	-	-	-
WDR44	0	genome.wustl.edu	37	X	117529291	117529291	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A2DI-01A-31D-A18P-09	TCGA-GM-A2DI-11A-13D-A18P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a01d9f40-0c3c-4b36-a7fa-b1e755529402	9f237983-cac7-4eda-9ec8-a6c733f9c177	X	117529291	117529291	G	C	SNP	WDR44	ENST00000254029	human	ensembl	69_37n	+1	known	missense	c.1037	p.R346T	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR44	HGNC	ENSG00000131725	49	0	0.00	55	13	18.84	-	-	-
