Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AHNAK	0	genome.wustl.edu	37	11	62299855	62299855	+	Silent	SNP	T	T	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	11	62299855	62299855	T	C	SNP	AHNAK	ENST00000378024	human	ensembl	69_37n	-1	known	silent	c.2034	p.G678	0.155	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	71	0	0.00	11	11	50.00	-	-	-
AKT1	0	genome.wustl.edu	37	14	105258971	105258971	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	105258971	105258971	C	G	SNP	AKT1	ENST00000349310	human	ensembl	69_37n	-1	known	missense	c.10	p.V4L	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom	-	no_errors	AKT1	HGNC	ENSG00000142208	74	0	0.00	30	11	26.83	-	-	-
ALOX5	0	genome.wustl.edu	37	10	45936008	45936008	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	10	45936008	45936008	G	A	SNP	ALOX5	ENST00000374391	human	ensembl	69_37n	+1	known	missense	c.1112	p.R371Q	1.000	pfam_LipOase_C,superfamily_LipOase_C,prints_LipOase_C	pfam_LipOase_C,pfam_LipOase_LH2,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_LipOase_LH2,prints_LipOase_mml,prints_LipOase_C,pfscan_LipOase_LH2	-	no_errors	ALOX5	HGNC	ENSG00000012779	46	0	0.00	21	4	16.00	-	-	-
ANK1	0	genome.wustl.edu	37	8	41573206	41573206	+	Silent	SNP	A	A	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	8	41573206	41573206	A	G	SNP	ANK1	ENST00000396942	human	ensembl	69_37n	-1	known	silent	c.1566	p.L522	0.022	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,smart_ZU5,smart_Death,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534	109	0	0.00	64	19	22.89	-	-	-
AR	0	genome.wustl.edu	37	X	66765158	66765159	+	In_Frame_Ins	INS	-	-	GCA			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	X	66765158	66765159	-	GCA	INS	AR	ENST00000374690	human	ensembl	69_37n	+1	known	in_frame_ins	c.170_171	p.61in_frame_insQ	0.929:0.925	pfam_Andrgn_rcpt	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	AR	HGNC	ENSG00000169083	47	0	0.00	28	5	15.15	-	-	-
ATP2B3	0	genome.wustl.edu	37	X	152818568	152818568	+	Silent	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	X	152818568	152818568	G	A	SNP	ATP2B3	ENST00000263519	human	ensembl	69_37n	+1	known	silent	c.1899	p.K633	1.000	pfam_Dehalogen-like_hydro,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_PMCA	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_Dehalogen-like_hydro,pfam_ATPase_P-typ_cation-transptr_N,pfam_HAD-SF_hydro-like_3,superfamily_ATPase_cation_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Ca-transp_PMCA,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP2B3	HGNC	ENSG00000067842	46	0	0.00	29	7	19.44	-	-	-
AZIN1	0	genome.wustl.edu	37	8	103842054	103842054	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	8	103842054	103842054	G	A	SNP	AZIN1	ENST00000337198	human	ensembl	69_37n	-1	known	missense	c.1015	p.H339Y	1.000	pfam_De-COase2_C,superfamily_Ala_racemase/Decarboxylase_C	pfam_De-COase2_N,pfam_De-COase2_C,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase,prints_Orn/DAP/Arg_de-COase	-	no_errors	AZIN1	HGNC	ENSG00000155096	43	0	0.00	22	3	12.00	-	-	-
BCL6B	0	genome.wustl.edu	37	17	6930108	6930108	+	Missense_Mutation	SNP	G	G	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	17	6930108	6930108	G	T	SNP	BCL6B	ENST00000293805	human	ensembl	69_37n	+1	known	missense	c.1139	p.G380V	1.000	pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	BCL6B	HGNC	ENSG00000161940	36	0	0.00	17	7	29.17	-	-	-
BNIPL	0	genome.wustl.edu	37	1	151011415	151011415	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	1	151011415	151011415	G	C	SNP	BNIPL	ENST00000368931	human	ensembl	69_37n	+1	known	missense	c.346	p.D116H	0.716	pfam_Bcl2-/adenovirus-E1B	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	BNIPL	HGNC	ENSG00000163141	87	0	0.00	71	24	25.00	-	-	-
BTNL3	0	genome.wustl.edu	37	5	180429703	180429703	+	Silent	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	180429703	180429703	G	A	SNP	BTNL3	ENST00000342868	human	ensembl	69_37n	+1	known	silent	c.705	p.L235	0.000	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like	-	no_errors	BTNL3	HGNC	ENSG00000168903	100	0	0.00	18	23	56.10	-	-	-
C14orf142	0	genome.wustl.edu	37	14	93673347	93673347	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	93673347	93673347	C	G	SNP	C14orf142	ENST00000556566	human	ensembl	69_37n	-1	putative	missense	c.28	p.E10Q	0.956	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	C14orf142	HGNC	ENSG00000170270	126	0	0.00	36	5	12.20	-	-	-
C20orf26	0	genome.wustl.edu	37	20	20050397	20050397	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	20	20050397	20050397	G	A	SNP	C20orf26	ENST00000494029	human	ensembl	69_37n	+1	known	missense	c.152	p.R51H	0.000	NULL	NULL	-	no_errors	C20orf26	HGNC	ENSG00000089101	80	0	0.00	21	4	16.00	-	-	-
C5orf34	0	genome.wustl.edu	37	5	43502579	43502579	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	43502579	43502579	C	T	SNP	C5orf34	ENST00000306862	human	ensembl	69_37n	-1	known	missense	c.1047	p.M349I	0.018	NULL	NULL	-	no_errors	C5orf34	HGNC	ENSG00000172244	79	0	0.00	50	7	12.28	-	-	-
CDHR2	0	genome.wustl.edu	37	5	176008530	176008530	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	176008530	176008530	G	A	SNP	CDHR2	ENST00000261944	human	ensembl	69_37n	+1	known	missense	c.2005	p.D669N	0.989	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR2	HGNC	ENSG00000074276	102	0	0.00	58	8	12.12	-	-	-
CDR2	0	genome.wustl.edu	37	16	22359004	22359004	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	16	22359004	22359004	C	T	SNP	CDR2	ENST00000268383	human	ensembl	69_37n	-1	known	missense	c.647	p.R216Q	1.000	NULL	NULL	-	no_errors	CDR2	HGNC	ENSG00000140743	106	0	0.00	24	16	40.00	-	-	-
CNKSR3	0	genome.wustl.edu	37	6	154771286	154771286	+	Silent	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	6	154771286	154771286	G	A	SNP	CNKSR3	ENST00000367213	human	ensembl	69_37n	-1	known	silent	c.159	p.V53	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,pfscan_PDZ,pfscan_SAM	-	no_errors	CNKSR3	HGNC	ENSG00000153721	67	0	0.00	17	5	22.73	-	-	-
CTDSPL2	0	genome.wustl.edu	37	15	44751303	44751303	+	Frame_Shift_Del	DEL	G	G	-			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	15	44751303	44751303	G	-	DEL	CTDSPL2	ENST00000260327	human	ensembl	69_37n	+1	known	frame_shift_del	c.91	p.D31fs	1.000	NULL	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF,tigrfam_Dullard_phosphatase	-	no_errors	CTDSPL2	HGNC	ENSG00000137770	31	0	0.00	4	2	33.33	-	-	-
CTR9	0	genome.wustl.edu	37	11	10794775	10794775	+	Silent	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	11	10794775	10794775	G	A	SNP	CTR9	ENST00000361367	human	ensembl	69_37n	+1	known	silent	c.2682	p.E894	0.797	NULL	pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CTR9	HGNC	ENSG00000198730	93	0	0.00	43	11	20.37	-	-	-
DGKE	0	genome.wustl.edu	37	17	54912561	54912561	+	Nonsense_Mutation	SNP	C	C	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	17	54912561	54912561	C	A	SNP	DGKE	ENST00000284061	human	ensembl	69_37n	+1	known	nonsense	c.405	p.C135*	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKE	HGNC	ENSG00000153933	62	0	0.00	34	4	10.53	-	-	-
DIMT1	0	genome.wustl.edu	37	5	61699154	61699154	+	Silent	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	61699154	61699154	C	G	SNP	DIMT1	ENST00000199320	human	ensembl	69_37n	-1	known	silent	c.99	p.G33	0.042	pfam_rRNA_Ade_methylase_transferase,tigrfam_rRNA_adenine_dimethylase	pfam_rRNA_Ade_methylase_transferase,smart_rRNA_Ade_methylase_Trfase_N,tigrfam_rRNA_adenine_dimethylase	-	no_errors	DIMT1	HGNC	ENSG00000086189	91	0	0.00	48	6	11.11	-	-	-
DKFZP434H168	0	genome.wustl.edu	37	16	56228093	56228093	+	RNA	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	16	56228093	56228093	G	A	SNP	DKFZP434H168	ENST00000567381	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	CTD-2050B12.2	Clone_based_vega_gene	ENSG00000261439	56	0	0.00	15	5	25.00	-	-	-
DNASE1L2	0	genome.wustl.edu	37	16	2288404	2288404	+	Silent	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	16	2288404	2288404	C	G	SNP	DNASE1L2	ENST00000320700	human	ensembl	69_37n	+1	known	silent	c.885	p.L295	0.998	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I_euk,pirsf_DNase_I_euk	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I_euk,pirsf_DNase_I_euk,prints_DNase_I_euk	-	no_errors	DNASE1L2	HGNC	ENSG00000167968	63	0	0.00	20	9	31.03	-	-	-
EHBP1L1	0	genome.wustl.edu	37	11	65351789	65351789	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	11	65351789	65351789	C	T	SNP	EHBP1L1	ENST00000533465	human	ensembl	69_37n	+1	putative	missense	c.319	p.P107S	0.989	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	EHBP1L1	HGNC	ENSG00000173442	38	0	0.00	11	6	35.29	-	-	-
ENTPD5	0	genome.wustl.edu	37	14	74440662	74440662	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	74440662	74440662	G	C	SNP	ENTPD5	ENST00000334696	human	ensembl	69_37n	-1	known	missense	c.804	p.F268L	1.000	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD5	HGNC	ENSG00000187097	39	0	0.00	19	6	24.00	-	-	-
ERAP2	0	genome.wustl.edu	37	5	96237327	96237327	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	96237327	96237327	G	C	SNP	ERAP2	ENST00000437043	human	ensembl	69_37n	+1	known	missense	c.1690	p.E564Q	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ERAP2	HGNC	ENSG00000164308	52	0	0.00	26	5	16.13	-	-	-
EXOC3L4	0	genome.wustl.edu	37	14	103566715	103566715	+	Silent	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	103566715	103566715	G	A	SNP	EXOC3L4	ENST00000380069	human	ensembl	69_37n	+1	known	silent	c.159	p.L53	0.000	NULL	pfam_Sec6	-	no_errors	EXOC3L4	HGNC	ENSG00000205436	80	0	0.00	25	8	24.24	-	-	-
FABP12	0	genome.wustl.edu	37	8	82437317	82437317	+	Silent	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	8	82437317	82437317	G	A	SNP	FABP12	ENST00000360464	human	ensembl	69_37n	-1	known	silent	c.387	p.Y129	0.915	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	FABP12	HGNC	ENSG00000197416	78	0	0.00	36	14	28.00	-	-	-
FAM120A	0	genome.wustl.edu	37	9	96214476	96214476	+	Missense_Mutation	SNP	C	C	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	9	96214476	96214476	C	A	SNP	FAM120A	ENST00000333936	human	ensembl	69_37n	+1	known	missense	c.279	p.F93L	1.000	NULL	NULL	-	no_errors	FAM120A	HGNC	ENSG00000048828	19	0	0.00	11	5	31.25	-	-	-
FAM188A	0	genome.wustl.edu	37	10	15879305	15879305	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	10	15879305	15879305	G	C	SNP	FAM188A	ENST00000277632	human	ensembl	69_37n	-1	known	missense	c.474	p.F158L	1.000	NULL	NULL	-	no_errors	FAM188A	HGNC	ENSG00000148481	25	0	0.00	13	4	23.53	-	-	-
FAM48A	0	genome.wustl.edu	37	13	37621496	37621496	+	RNA	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	13	37621496	37621496	C	T	SNP	FAM48A	ENST00000470359	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM48A	HGNC	ENSG00000102710	15	0	0.00	21	4	16.00	-	-	-
FAM75D5	0	genome.wustl.edu	37	9	84533024	84533024	+	RNA	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	9	84533024	84533024	G	A	SNP	FAM75D5	ENST00000527857	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM75D5	HGNC	ENSG00000240632	128	0	0.00	59	14	19.18	-	-	-
FANCG	0	genome.wustl.edu	37	9	35077299	35077299	+	Missense_Mutation	SNP	A	A	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	9	35077299	35077299	A	G	SNP	FANCG	ENST00000378643	human	ensembl	69_37n	-1	known	missense	c.608	p.L203S	0.854	NULL	superfamily_Sig_transdc_His_kin_Hpt_dom,smart_TPR_repeat	-	no_errors	FANCG	HGNC	ENSG00000221829	64	0	0.00	23	5	17.86	-	-	-
FXR2	0	genome.wustl.edu	37	17	7496081	7496081	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	17	7496081	7496081	C	T	SNP	FXR2	ENST00000250113	human	ensembl	69_37n	-1	known	missense	c.1660	p.D554N	1.000	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR2	HGNC	ENSG00000129245	51	0	0.00	15	9	37.50	-	-	-
GOLGA8B	0	genome.wustl.edu	37	15	34820136	34820136	+	Silent	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	15	34820136	34820136	G	A	SNP	GOLGA8B	ENST00000438958	human	ensembl	69_37n	-1	known	silent	c.1686	p.A562	0.006	NULL	NULL	-	no_errors	GOLGA8B	HGNC	ENSG00000215252	110	0	0.00	36	6	14.29	-	-	-
GRID2	0	genome.wustl.edu	37	4	94137898	94137898	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	4	94137898	94137898	G	A	SNP	GRID2	ENST00000282020	human	ensembl	69_37n	+1	known	missense	c.799	p.D267N	1.000	pfam_ANF_lig-bd_rcpt	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208	90	0	0.00	47	6	11.32	-	-	-
GRIK4	0	genome.wustl.edu	37	11	120776145	120776145	+	Frame_Shift_Del	DEL	C	C	-			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	11	120776145	120776145	C	-	DEL	GRIK4	ENST00000527524	human	ensembl	69_37n	+1	known	frame_shift_del	c.1419	p.Y473fs	0.153	pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK4	HGNC	ENSG00000149403	48	0	0.00	15	2	11.76	-	-	-
HEATR7B1	0	genome.wustl.edu	37	2	234703154	234703154	+	Splice_Site	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	2	234703154	234703154	C	T	SNP	HEATR7B1	ENST00000389758	human	ensembl	69_37n	+1	novel	splice_site	c.966+2	e7+2	0.957	-	-	-	no_errors	HEATR7B1	HGNC	ENSG00000185038	58	0	0	12	10	45.45	-	-	-
HEATR7B1	0	genome.wustl.edu	37	2	234703154	234703154	+	Splice_Site	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	2	234703154	234703154	C	T	SNP	HEATR7B1	ENST00000389758	human	ensembl	69_37n	+1	novel	splice_site	c.966+2	e7+2	0.957	-	-	-	no_errors	HEATR7B1	HGNC	ENSG00000185038	58	0	0.00	12	10	45.45	-	-	-
HIST1H2BN	0	genome.wustl.edu	37	6	27806549	27806549	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	6	27806549	27806549	G	A	SNP	HIST1H2BN	ENST00000396980	human	ensembl	69_37n	+1	known	missense	c.110	p.S37N	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BN	HGNC	ENSG00000233822	148	0	0.00	56	10	15.15	-	-	-
HMHA1	0	genome.wustl.edu	37	19	1084313	1084313	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	19	1084313	1084313	C	T	SNP	HMHA1	ENST00000313093	human	ensembl	69_37n	+1	known	missense	c.3032	p.P1011L	0.005	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448	132	0	0.00	45	12	21.05	-	-	-
IGHV1-3	0	genome.wustl.edu	37	14	106471404	106471404	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	106471404	106471404	C	G	SNP	IGHV1-3	ENST00000390595	human	ensembl	69_37n	-1	known	missense	c.193	p.E65Q	1.000	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV1-3	HGNC	ENSG00000211935	148	0	0.00	59	9	13.24	-	-	-
IQGAP2	0	genome.wustl.edu	37	5	75896731	75896731	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	75896731	75896731	C	T	SNP	IQGAP2	ENST00000274364	human	ensembl	69_37n	+1	known	missense	c.1166	p.S389F	0.212	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_Rsp5_WWP,pfscan_RasGAP	-	no_errors	IQGAP2	HGNC	ENSG00000145703	84	0	0.00	51	8	13.56	-	-	-
IQSEC2	0	genome.wustl.edu	37	X	53280197	53280197	+	Frame_Shift_Del	DEL	C	C	-			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	X	53280197	53280197	C	-	DEL	IQSEC2	ENST00000396435	human	ensembl	69_37n	-1	known	frame_shift_del	c.1561	p.D521fs	1.000	NULL	pfam_Sec7,superfamily_Sec7,smart_Sec7,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7	-	no_errors	IQSEC2	HGNC	ENSG00000124313	25	0	0.00	6	2	25.00	-	-	-
ITPKB	0	genome.wustl.edu	37	1	226924884	226924885	+	In_Frame_Ins	INS	-	-	CCA			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	1	226924884	226924885	-	CCA	INS	ITPKB	ENST00000272117	human	ensembl	69_37n	-1	known	in_frame_ins	c.276_275	p.93in_frame_insG	0.091:0.097	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772	11	0	0.00	5	3	37.50	-	-	-
JMJD1C	0	genome.wustl.edu	37	10	64975356	64975356	+	Nonsense_Mutation	SNP	G	G	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	10	64975356	64975356	G	T	SNP	JMJD1C	ENST00000399262	human	ensembl	69_37n	-1	known	nonsense	c.779	p.S260*	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988	51	0	0.00	33	4	10.53	-	-	-
KCND1	0	genome.wustl.edu	37	X	48826174	48826174	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	X	48826174	48826174	G	A	SNP	KCND1	ENST00000218176	human	ensembl	69_37n	-1	known	missense	c.505	p.R169W	0.939	prints_K_chnl_volt-dep_Kv4	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND1	HGNC	ENSG00000102057	36	0	0.00	12	4	25.00	-	-	-
KLHL14	0	genome.wustl.edu	37	18	30314187	30314187	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	18	30314187	30314187	G	A	SNP	KLHL14	ENST00000358095	human	ensembl	69_37n	-1	known	missense	c.1091	p.S364L	0.000	NULL	pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	KLHL14	HGNC	ENSG00000197705	105	0	0.00	29	6	17.14	-	-	-
KRT19	0	genome.wustl.edu	37	17	39680234	39680234	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	17	39680234	39680234	C	G	SNP	KRT19	ENST00000361566	human	ensembl	69_37n	-1	known	missense	c.964	p.D322H	0.995	pfam_F	pfam_F,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT19	HGNC	ENSG00000171345	39	0	0.00	23	4	14.81	-	-	-
KRT23	0	genome.wustl.edu	37	17	39092673	39092673	+	Silent	SNP	A	A	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	17	39092673	39092673	A	T	SNP	KRT23	ENST00000209718	human	ensembl	69_37n	-1	known	silent	c.183	p.S61	0.000	NULL	pfam_F,prints_Keratin_I	-	no_errors	KRT23	HGNC	ENSG00000108244	81	0	0.00	27	16	37.21	-	-	-
L3MBTL4	0	genome.wustl.edu	37	18	6241437	6241437	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	18	6241437	6241437	C	G	SNP	L3MBTL4	ENST00000284898	human	ensembl	69_37n	-1	known	missense	c.472	p.D158H	1.000	pfam_Mbt	pfam_Mbt,pfam_SAM_type1,pfam_Znf_C2HC,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL4	HGNC	ENSG00000154655	68	0	0.00	38	9	19.15	-	-	-
LAIR2	0	genome.wustl.edu	37	19	55019380	55019380	+	Silent	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	19	55019380	55019380	C	T	SNP	LAIR2	ENST00000301202	human	ensembl	69_37n	+1	known	silent	c.345	p.F115	0.004	smart_Ig_sub	smart_Ig_sub	-	no_errors	LAIR2	HGNC	ENSG00000167618	64	0	0.00	24	8	25.00	-	-	-
LYST	0	genome.wustl.edu	37	1	235872550	235872550	+	Silent	SNP	A	A	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	1	235872550	235872550	A	C	SNP	LYST	ENST00000389793	human	ensembl	69_37n	-1	known	silent	c.9984	p.P3328	0.002	pfam_BEACH_dom,superfamily_BEACH_dom,superfamily_ARM-type_fold,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	34	0	0.00	12	8	40.00	-	-	-
MIER3	0	genome.wustl.edu	37	5	56231261	56231261	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	56231261	56231261	C	G	SNP	MIER3	ENST00000381199	human	ensembl	69_37n	-1	known	missense	c.589	p.E197Q	1.000	pfam_ELM2_dom,pfscan_ELM2_dom	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	MIER3	HGNC	ENSG00000155545	32	0	0.00	22	4	15.38	-	-	-
MRPS18B	0	genome.wustl.edu	37	6	30587369	30587369	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	6	30587369	30587369	G	A	SNP	MRPS18B	ENST00000259873	human	ensembl	69_37n	+1	known	missense	c.178	p.E60K	1.000	NULL	pfam_Ribosomal_S18,superfamily_Ribosomal_S18	-	no_errors	MRPS18B	HGNC	ENSG00000204568	28	0	0.00	20	4	16.67	-	-	-
MTBP	0	genome.wustl.edu	37	8	121468841	121468843	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	8	121468841	121468843	AGA	-	DEL	MTBP	ENST00000305949	human	ensembl	69_37n	+1	known	in_frame_del	c.678_680	p.E227in_frame_del	0.999:1.000:0.992	NULL	NULL	-	no_errors	MTBP	HGNC	ENSG00000172167	101	0	0.00	31	22	40.74	-	-	-
MUC12	0	genome.wustl.edu	37	7	100646824	100646824	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	7	100646824	100646824	C	T	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.13409	p.T4470I	0.022	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	103	0	0.00	31	4	11.43	-	-	-
MUC16	0	genome.wustl.edu	37	19	9091148	9091148	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	19	9091148	9091148	G	C	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.667	p.P223A	0.024	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	80	0	0.00	35	13	27.08	-	-	-
MYLIP	0	genome.wustl.edu	37	6	16143354	16143354	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	6	16143354	16143354	C	T	SNP	MYLIP	ENST00000356840	human	ensembl	69_37n	+1	known	missense	c.568	p.H190Y	1.000	pfam_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_FERM_N,pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,pfscan_Znf_RING,prints_Band_41_fam,prints_Ez/rad/moesin	-	no_errors	MYLIP	HGNC	ENSG00000007944	36	0	0.00	17	10	37.04	-	-	-
NBPF8	0	genome.wustl.edu	37	1	144615237	144615237	+	RNA	SNP	T	T	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	1	144615237	144615237	T	G	SNP	NBPF8	ENST00000421407	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	NBPF8	HGNC	ENSG00000225241	116	1	0.85	33	8	19.51	-	-	-
NDRG1	0	genome.wustl.edu	37	8	134250811	134250811	+	RNA	SNP	A	A	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	8	134250811	134250811	A	T	SNP	NDRG1	ENST00000521414	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NDRG1	HGNC	ENSG00000104419	143	1	0.69	35	17	32.69	-	-	-
NKX6-1	0	genome.wustl.edu	37	4	85416968	85416968	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	4	85416968	85416968	C	T	SNP	NKX6-1	ENST00000295886	human	ensembl	69_37n	-1	known	missense	c.700	p.G234R	1.000	superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	NKX6-1	HGNC	ENSG00000163623	69	0	0.00	34	6	15.00	-	-	-
NRXN3	0	genome.wustl.edu	37	14	78709989	78709989	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	78709989	78709989	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	69_37n	+1	known	missense	c.553	p.E185K	1.000	superfamily_ConA-like_lec_gl,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	32	0	0.00	14	9	39.13	-	-	-
NUP210L	0	genome.wustl.edu	37	1	153965335	153965335	+	Missense_Mutation	SNP	A	A	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	1	153965335	153965335	A	T	SNP	NUP210L	ENST00000368559	human	ensembl	69_37n	-1	known	missense	c.5643	p.H1881Q	0.379	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	61	0	0.00	47	7	12.96	-	-	-
OR10A5	0	genome.wustl.edu	37	11	6867630	6867630	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	11	6867630	6867630	C	G	SNP	OR10A5	ENST00000379831	human	ensembl	69_37n	+1	known	missense	c.729	p.F243L	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10A5	HGNC	ENSG00000166363	107	0	0.00	41	11	21.15	-	-	-
OR2T8	0	genome.wustl.edu	37	1	248084909	248084909	+	Missense_Mutation	SNP	T	T	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	1	248084909	248084909	T	G	SNP	OR2T8	ENST00000319968	human	ensembl	69_37n	+1	known	missense	c.590	p.M197R	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2T8	HGNC	ENSG00000177462	38	0	0.00	18	7	28.00	-	-	-
OR4C16	0	genome.wustl.edu	37	11	55340443	55340443	+	Silent	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	11	55340443	55340443	C	G	SNP	OR4C16	ENST00000314634	human	ensembl	69_37n	+1	known	silent	c.840	p.L280	0.211	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4C16	HGNC	ENSG00000181935	34	0	0.00	14	6	30.00	-	-	-
OR4N2	0	genome.wustl.edu	37	14	20296298	20296298	+	Nonsense_Mutation	SNP	G	G	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	20296298	20296298	G	T	SNP	OR4N2	ENST00000315947	human	ensembl	69_37n	+1	known	nonsense	c.691	p.E231*	0.532	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR4N2	HGNC	ENSG00000176294	206	2	0.96	91	15	14.15	-	-	-
PACSIN2	0	genome.wustl.edu	37	22	43287091	43287091	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	22	43287091	43287091	C	G	SNP	PACSIN2	ENST00000263246	human	ensembl	69_37n	-1	known	missense	c.315	p.M105I	1.000	NULL	pfam_FCH,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_FCH,smart_SH3_domain,pfscan_FCH,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PACSIN2	HGNC	ENSG00000100266	108	0	0.00	41	9	18.00	-	-	-
PAPLN	0	genome.wustl.edu	37	14	73720540	73720540	+	Silent	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	73720540	73720540	G	A	SNP	PAPLN	ENST00000427855	human	ensembl	69_37n	+1	known	silent	c.1173	p.S391	0.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Prot_inh_Kunz-m,pfam_PLAC,superfamily_Prot_inh_Kunz-m,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Prot_inh_Kunz-m,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,prints_Peptidase_M12B_ADAM-TS,prints_Prot_inh_Kunz-m,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like	-	no_errors	PAPLN	HGNC	ENSG00000100767	116	0	0.00	30	11	26.83	-	-	-
PCDHGA1	0	genome.wustl.edu	37	5	140712490	140712490	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	140712490	140712490	C	T	SNP	PCDHGA1	ENST00000517417	human	ensembl	69_37n	+1	known	missense	c.2239	p.R747W	0.065	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956	129	0	0.00	56	17	23.29	-	-	-
PGF	0	genome.wustl.edu	37	14	75413575	75413575	+	Missense_Mutation	SNP	G	G	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	14	75413575	75413575	G	T	SNP	PGF	ENST00000405431	human	ensembl	69_37n	-1	known	missense	c.469	p.R157S	0.000	NULL	pfam_PD_growth_factor,smart_PD_growth_factor,pfscan_PD_growth_factor	-	no_errors	PGF	HGNC	ENSG00000119630	59	0	0.00	13	3	18.75	-	-	-
PIGN	0	genome.wustl.edu	37	18	59770085	59770085	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	18	59770085	59770085	G	A	SNP	PIGN	ENST00000357637	human	ensembl	69_37n	-1	known	missense	c.1910	p.S637F	0.005	pfam_GPI_EtnP_transferase_1_C	pfam_GPI_EtnP_transferase_1_C,pfam_Phosphodiest/P_Trfase,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGN	HGNC	ENSG00000197563	43	0	0.00	18	6	25.00	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178921551	178921551	+	Missense_Mutation	SNP	A	A	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	3	178921551	178921551	A	C	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1033	p.N345H	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	49	0	0.00	25	11	30.56	-	-	-
PNPLA6	0	genome.wustl.edu	37	19	7601418	7601418	+	Silent	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	19	7601418	7601418	C	T	SNP	PNPLA6	ENST00000414982	human	ensembl	69_37n	+1	known	silent	c.426	p.L142	0.912	NULL	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444	64	0	0.00	14	8	36.36	-	-	-
PPAP2A	0	genome.wustl.edu	37	5	54763841	54763841	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	54763841	54763841	G	C	SNP	PPAP2A	ENST00000264775	human	ensembl	69_37n	-1	known	missense	c.350	p.T117S	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2A	HGNC	ENSG00000067113	50	0	0.00	19	20	51.28	-	-	-
RAB4B	0	genome.wustl.edu	37	19	41285991	41285991	+	Silent	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	19	41285991	41285991	C	T	SNP	RAB4B	ENST00000357052	human	ensembl	69_37n	+1	known	silent	c.84	p.F28	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_ProtSyn_GTP-bd,pfam_Gtr1_RagA,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB4B	HGNC	ENSG00000167578	141	0	0.00	76	12	13.48	-	-	-
RASGRF2	0	genome.wustl.edu	37	5	80363981	80363981	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	5	80363981	80363981	G	A	SNP	RASGRF2	ENST00000265080	human	ensembl	69_37n	+1	known	missense	c.526	p.E176K	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF2	HGNC	ENSG00000113319	37	0	0.00	6	7	53.85	-	-	-
RELL1	0	genome.wustl.edu	37	4	37651123	37651123	+	Splice_Site	SNP	C	C	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	4	37651123	37651123	C	A	SNP	RELL1	ENST00000314117	human	ensembl	69_37n	-1	known	splice_site	c.89-1	e2-1	0.470	-	-	-	no_errors	RELL1	HGNC	ENSG00000181826	49	0	0.00	18	10	35.71	-	-	-
RFPL4A	0	genome.wustl.edu	37	19	56274193	56274193	+	Silent	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	19	56274193	56274193	G	C	SNP	RFPL4A	ENST00000434937	human	ensembl	69_37n	+1	novel	silent	c.516	p.V172	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL4A	HGNC	ENSG00000223638	33	0	0.00	18	3	14.29	-	-	-
RMND1	0	genome.wustl.edu	37	6	151757629	151757629	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	6	151757629	151757629	G	C	SNP	RMND1	ENST00000367303	human	ensembl	69_37n	-1	known	missense	c.565	p.Q189E	1.000	NULL	pfam_DUF155	-	no_errors	RMND1	HGNC	ENSG00000155906	38	0	0.00	20	4	16.67	-	-	-
SAFB2	0	genome.wustl.edu	37	19	5604869	5604869	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	19	5604869	5604869	C	T	SNP	SAFB2	ENST00000252542	human	ensembl	69_37n	-1	known	missense	c.1375	p.D459N	0.998	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_SAP_DNA-bd,smart_SAP_DNA-bd,smart_RRM_dom,pfscan_SAP_DNA-bd,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254	37	0	0.00	16	8	33.33	-	-	-
SHANK2	0	genome.wustl.edu	37	11	70821019	70821019	+	Frame_Shift_Del	DEL	A	A	-			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	11	70821019	70821019	A	-	DEL	SHANK2	ENST00000338508	human	ensembl	69_37n	-1	known	frame_shift_del	c.560	p.L187fs	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105	62	0	0.00	15	2	11.76	-	-	-
SLC35G3	0	genome.wustl.edu	37	17	33521089	33521089	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	17	33521089	33521089	G	A	SNP	SLC35G3	ENST00000297307	human	ensembl	69_37n	-1	known	missense	c.238	p.H80Y	1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35G3	HGNC	ENSG00000164729	137	0	0.00	48	22	31.43	-	-	-
TCF4	0	genome.wustl.edu	37	18	53128339	53128339	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	18	53128339	53128339	C	G	SNP	TCF4	ENST00000398339	human	ensembl	69_37n	-1	known	missense	c.521	p.G174A	1.000	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	TCF4	HGNC	ENSG00000196628	47	0	0.00	14	9	39.13	-	-	-
TDRD12	0	genome.wustl.edu	37	19	33293948	33293948	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	19	33293948	33293948	G	A	SNP	TDRD12	ENST00000444215	human	ensembl	69_37n	+1	known	missense	c.2452	p.A818T	0.000	NULL	pfam_Tudor,pfam_DNA/RNA_helicase_DEAD/DEAH_N	-	no_errors	TDRD12	HGNC	ENSG00000173809	40	0	0.00	21	4	16.00	-	-	-
TERC	0	genome.wustl.edu	37	3	169482724	169482724	+	RNA	SNP	C	C	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	3	169482724	169482724	C	T	SNP	TERC	ENST00000363312	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.142	-	-	-	no_errors	TERC	HGNC	ENSG00000200182	88	0	0.00	33	11	25.00	-	-	-
TG	0	genome.wustl.edu	37	8	133883774	133883774	+	Frame_Shift_Del	DEL	C	C	-			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	8	133883774	133883774	C	-	DEL	TG	ENST00000220616	human	ensembl	69_37n	+1	known	frame_shift_del	c.456	p.Q153fs	0.999	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	67	0	0.00	15	2	11.76	-	-	-
TMTC1	0	genome.wustl.edu	37	12	29920982	29920982	+	Missense_Mutation	SNP	T	T	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	12	29920982	29920982	T	G	SNP	TMTC1	ENST00000256062	human	ensembl	69_37n	-1	known	missense	c.5	p.N2T	1.000	NULL	pfam_TPR-1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687	44	0	0.00	15	6	28.57	-	-	-
TRIM33	0	genome.wustl.edu	37	1	115006967	115006967	+	Missense_Mutation	SNP	C	C	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	1	115006967	115006967	C	A	SNP	TRIM33	ENST00000358465	human	ensembl	69_37n	-1	known	missense	c.570	p.Q190H	1.000	NULL	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Bromodomain,prints_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain	-	no_errors	TRIM33	HGNC	ENSG00000197323	47	0	0.00	22	4	15.38	-	-	-
USP32P1	0	genome.wustl.edu	37	17	16701809	16701809	+	RNA	SNP	C	C	A			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	17	16701809	16701809	C	A	SNP	USP32P1	ENST00000341745	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	USP32P1	HGNC	ENSG00000188933	251	0	0.00	118	18	13.24	-	-	-
UTRN	0	genome.wustl.edu	37	6	144743013	144743013	+	Splice_Site	SNP	G	G	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	6	144743013	144743013	G	T	SNP	UTRN	ENST00000367545	human	ensembl	69_37n	+1	known	splice_site	c.142-1	e3-1	1.000	-	-	-	no_errors	UTRN	HGNC	ENSG00000152818	64	0	0	29	4	12.12	-	-	-
UTRN	0	genome.wustl.edu	37	6	144743013	144743013	+	Splice_Site	SNP	G	G	T			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	6	144743013	144743013	G	T	SNP	UTRN	ENST00000367545	human	ensembl	69_37n	+1	known	splice_site	c.142-1	e3-1	1.000	-	-	-	no_errors	UTRN	HGNC	ENSG00000152818	64	0	0.00	29	4	12.12	-	-	-
WDR72	0	genome.wustl.edu	37	15	54003115	54003115	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	15	54003115	54003115	C	G	SNP	WDR72	ENST00000360509	human	ensembl	69_37n	-1	known	missense	c.893	p.R298T	0.310	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415	59	0	0.00	22	7	24.14	-	-	-
ZBTB40	0	genome.wustl.edu	37	1	22848143	22848143	+	Frame_Shift_Del	DEL	A	A	-			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	1	22848143	22848143	A	-	DEL	ZBTB40	ENST00000375647	human	ensembl	69_37n	+1	known	frame_shift_del	c.3203	p.E1068fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB40	HGNC	ENSG00000184677	37	0	0.00	8	2	20.00	-	-	-
ZNF273	0	genome.wustl.edu	37	7	64363752	64363752	+	Silent	SNP	G	G	C			TCGA-GM-A3NW-01A-21D-A228-09	TCGA-GM-A3NW-10A-01D-A22A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b7ba9ef1-b3c6-45a1-a059-5aea15561d95	70a26034-3902-4c3c-b9bb-40720ae1bb73	7	64363752	64363752	G	C	SNP	ZNF273	ENST00000476120	human	ensembl	69_37n	+1	known	silent	c.57	p.G19	0.339	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF273	HGNC	ENSG00000198039	95	0	0.00	26	8	23.53	-	-	-
