Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
CECR2	0	genome.wustl.edu	37	22	17978507	17978507	+	Missense_Mutation	SNP	G	G	T			TCGA-GM-A3XG-01A-31D-A243-09	TCGA-GM-A3XG-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e92fbc5-c484-449a-8a40-8d820d6fd64d	c1481d6c-531b-4d94-be70-9370c5e53417	22	17978507	17978507	G	T	SNP	CECR2	ENST00000400573	human	ensembl	69_37n	+1	novel	missense	c.405	p.W135C	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CECR2	HGNC	ENSG00000099954	32	0	0.00	31	4	11.43	-	-	-
COG1	0	genome.wustl.edu	37	17	71197882	71197882	+	Nonsense_Mutation	SNP	C	C	A			TCGA-GM-A3XG-01A-31D-A243-09	TCGA-GM-A3XG-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e92fbc5-c484-449a-8a40-8d820d6fd64d	c1481d6c-531b-4d94-be70-9370c5e53417	17	71197882	71197882	C	A	SNP	COG1	ENST00000299886	human	ensembl	69_37n	+1	known	nonsense	c.1916	p.S639*	0.008	NULL	pfam_Vps51	-	no_errors	COG1	HGNC	ENSG00000166685	42	0	0.00	35	4	10.26	-	-	-
DCTN5	0	genome.wustl.edu	37	16	23680339	23680339	+	RNA	SNP	G	G	T			TCGA-GM-A3XG-01A-31D-A243-09	TCGA-GM-A3XG-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e92fbc5-c484-449a-8a40-8d820d6fd64d	c1481d6c-531b-4d94-be70-9370c5e53417	16	23680339	23680339	G	T	SNP	DCTN5	ENST00000563614	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DCTN5	HGNC	ENSG00000166847	43	0	0.00	36	4	10.00	-	-	-
FAM208B	0	genome.wustl.edu	37	10	5789185	5789185	+	Silent	SNP	G	G	T			TCGA-GM-A3XG-01A-31D-A243-09	TCGA-GM-A3XG-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e92fbc5-c484-449a-8a40-8d820d6fd64d	c1481d6c-531b-4d94-be70-9370c5e53417	10	5789185	5789185	G	T	SNP	FAM208B	ENST00000328090	human	ensembl	69_37n	+1	known	silent	c.3801	p.V1267	0.014	NULL	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021	18	0	0.00	17	4	19.05	-	-	-
LINC00588	0	genome.wustl.edu	37	8	58197243	58197243	+	RNA	SNP	G	G	C			TCGA-GM-A3XG-01A-31D-A243-09	TCGA-GM-A3XG-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e92fbc5-c484-449a-8a40-8d820d6fd64d	c1481d6c-531b-4d94-be70-9370c5e53417	8	58197243	58197243	G	C	SNP	LINC00588	ENST00000521663	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00588	HGNC	ENSG00000215117	8	0	0.00	4	5	55.56	-	-	-
OR4C5	0	genome.wustl.edu	37	11	48387890	48387890	+	Missense_Mutation	SNP	T	T	C			TCGA-GM-A3XG-01A-31D-A243-09	TCGA-GM-A3XG-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e92fbc5-c484-449a-8a40-8d820d6fd64d	c1481d6c-531b-4d94-be70-9370c5e53417	11	48387890	48387890	T	C	SNP	OR4C5	ENST00000319813	human	ensembl	69_37n	-1	known	missense	c.128	p.E43G	0.003	NULL	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR4C5	HGNC	ENSG00000176540	35	0	0.00	33	7	17.50	-	-	-
SLC22A16	0	genome.wustl.edu	37	6	110757113	110757113	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3XG-01A-31D-A243-09	TCGA-GM-A3XG-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e92fbc5-c484-449a-8a40-8d820d6fd64d	c1481d6c-531b-4d94-be70-9370c5e53417	6	110757113	110757113	C	T	SNP	SLC22A16	ENST00000368919	human	ensembl	69_37n	-1	known	missense	c.1363	p.G455R	0.100	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A16	HGNC	ENSG00000004809	16	0	0.00	17	5	22.73	-	-	-
TMEM104	0	genome.wustl.edu	37	17	72787153	72787153	+	Missense_Mutation	SNP	G	G	T			TCGA-GM-A3XG-01A-31D-A243-09	TCGA-GM-A3XG-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	7e92fbc5-c484-449a-8a40-8d820d6fd64d	c1481d6c-531b-4d94-be70-9370c5e53417	17	72787153	72787153	G	T	SNP	TMEM104	ENST00000335464	human	ensembl	69_37n	+1	known	missense	c.405	p.M135I	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	TMEM104	HGNC	ENSG00000109066	22	0	0.00	25	4	13.79	-	-	-
