Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AANAT	0	genome.wustl.edu	37	17	74466051	74466051	+	Nonstop_Mutation	SNP	G	G	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	17	74466051	74466051	G	T	SNP	AANAT	ENST00000250615	human	ensembl	69_37n	+1	known	nonstop	c.758	p.*253L	0.105	NULL	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	AANAT	HGNC	ENSG00000129673	63	0	0.00	67	39	36.79	-	-	-
ACE	0	genome.wustl.edu	37	17	61557696	61557696	+	Splice_Site	SNP	A	A	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	17	61557696	61557696	A	T	SNP	ACE	ENST00000290866	human	ensembl	69_37n	+1	known	splice_site	c.656-2	e5-2	0.990	-	-	-	no_errors	ACE	HGNC	ENSG00000159640	50	0	0	96	26	21.31	-	-	-
ACSM2A	0	genome.wustl.edu	37	16	20492197	20492197	+	Missense_Mutation	SNP	T	T	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	16	20492197	20492197	T	C	SNP	ACSM2A	ENST00000219054	human	ensembl	69_37n	+1	known	missense	c.1463	p.V488A	0.796	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2A	HGNC	ENSG00000183747	57	0	0.00	66	10	12.99	-	-	-
ALDH1A2	0	genome.wustl.edu	37	15	58284996	58284996	+	Silent	SNP	G	G	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	15	58284996	58284996	G	T	SNP	ALDH1A2	ENST00000249750	human	ensembl	69_37n	-1	known	silent	c.705	p.V235	0.986	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A2	HGNC	ENSG00000128918	30	0	0.00	59	18	23.38	-	-	-
ANKRD30A	0	genome.wustl.edu	37	10	37422843	37422843	+	Splice_Site	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	10	37422843	37422843	G	A	SNP	ANKRD30A	ENST00000361713	human	ensembl	69_37n	+1	known	splice_site	c.450-1	e5-1	0.990	-	-	-	no_errors	ANKRD30A	HGNC	ENSG00000148513	94	0	0.00	87	47	35.07	-	-	-
ANXA3	0	genome.wustl.edu	37	4	79500181	79500181	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	4	79500181	79500181	G	C	SNP	ANXA3	ENST00000264908	human	ensembl	69_37n	+1	known	missense	c.104	p.G35A	1.000	pfam_Annexin_repeat,superfamily_Annexin,smart_Annexin_repeat,prints_Annexin	pfam_Annexin_repeat,superfamily_Annexin,smart_Annexin_repeat,prints_Annexin,prints_AnnexinIII	-	no_errors	ANXA3	HGNC	ENSG00000138772	22	0	0.00	29	16	34.78	-	-	-
ARHGAP19	0	genome.wustl.edu	37	10	99030411	99030411	+	RNA	SNP	G	G	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	10	99030411	99030411	G	T	SNP	ARHGAP19	ENST00000479633	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ARHGAP19	HGNC	ENSG00000213390	42	0	0.00	17	10	37.04	-	-	-
ASXL3	0	genome.wustl.edu	37	18	31314329	31314329	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	18	31314329	31314329	G	C	SNP	ASXL3	ENST00000269197	human	ensembl	69_37n	+1	known	missense	c.1032	p.K344N	1.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431	35	0	0.00	47	16	25.00	-	-	-
BPIFB4	0	genome.wustl.edu	37	20	31672753	31672753	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	20	31672753	31672753	G	C	SNP	BPIFB4	ENST00000375483	human	ensembl	69_37n	+1	known	missense	c.733	p.V245L	0.998	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191	60	0	0.00	67	31	31.63	-	-	-
BTRC	0	genome.wustl.edu	37	10	103295142	103295142	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	10	103295142	103295142	G	C	SNP	BTRC	ENST00000370187	human	ensembl	69_37n	+1	known	missense	c.1379	p.R460T	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom_cyclin-like,superfamily_WD40_repeat_dom,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_WD40_repeat,pfscan_F-box_dom_cyclin-like,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	BTRC	HGNC	ENSG00000166167	46	0	0.00	26	34	56.67	-	-	-
C16orf78	0	genome.wustl.edu	37	16	49430463	49430463	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	16	49430463	49430463	G	A	SNP	C16orf78	ENST00000299191	human	ensembl	69_37n	+1	known	missense	c.524	p.R175K	0.175	NULL	NULL	-	no_errors	C16orf78	HGNC	ENSG00000166152	32	0	0.00	37	17	31.48	-	-	-
C1orf116	0	genome.wustl.edu	37	1	207195857	207195857	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	207195857	207195857	G	C	SNP	C1orf116	ENST00000359470	human	ensembl	69_37n	-1	known	missense	c.1252	p.P418A	0.083	NULL	NULL	-	no_errors	C1orf116	HGNC	ENSG00000182795	21	0	0.00	43	13	23.21	-	-	-
C20orf26	0	genome.wustl.edu	37	20	20269404	20269404	+	Missense_Mutation	SNP	T	T	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	20	20269404	20269404	T	A	SNP	C20orf26	ENST00000245957	human	ensembl	69_37n	+1	known	missense	c.2948	p.F983Y	1.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101	45	0	0.00	43	31	41.89	-	-	-
C7orf62	0	genome.wustl.edu	37	7	88424169	88424169	+	Missense_Mutation	SNP	A	A	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	7	88424169	88424169	A	G	SNP	C7orf62	ENST00000297203	human	ensembl	69_37n	-1	known	missense	c.88	p.Y30H	1.000	NULL	NULL	-	no_errors	C7orf62	HGNC	ENSG00000164645	72	0	0.00	69	22	24.18	-	-	-
CADM1	0	genome.wustl.edu	37	11	115102163	115102163	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	11	115102163	115102163	C	G	SNP	CADM1	ENST00000452722	human	ensembl	69_37n	-1	known	missense	c.472	p.E158Q	1.000	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like	-	no_errors	CADM1	HGNC	ENSG00000182985	137	0	0.00	96	20	17.24	-	-	-
CCDC120	0	genome.wustl.edu	37	X	48922006	48922006	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	X	48922006	48922006	C	G	SNP	CCDC120	ENST00000422185	human	ensembl	69_37n	+1	known	missense	c.430	p.R144G	0.981	NULL	pfam_DUF3338	-	no_errors	CCDC120	HGNC	ENSG00000147144	22	0	0.00	25	8	24.24	-	-	-
CCDC41	0	genome.wustl.edu	37	12	94729586	94729586	+	RNA	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	12	94729586	94729586	G	A	SNP	CCDC41	ENST00000546587	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CCDC41	HGNC	ENSG00000173588	8	0	0.00	2	5	71.43	-	-	-
CELA3B	0	genome.wustl.edu	37	1	22304463	22304463	+	Silent	SNP	A	A	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	22304463	22304463	A	G	SNP	CELA3B	ENST00000374666	human	ensembl	69_37n	+1	known	silent	c.75	p.Q25	0.000	NULL	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_stop_codon:bad_bp_length_for_coding_region	CELA3B	HGNC	ENSG00000219073	24	0	0.00	11	3	21.43	-	-	-
CELSR3	0	genome.wustl.edu	37	3	48699704	48699704	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	3	48699704	48699704	C	G	SNP	CELSR3	ENST00000544264	human	ensembl	69_37n	-1	known	missense	c.364	p.E122Q	0.000	NULL	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EGF-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	81	0	0.00	52	30	36.59	-	-	-
CEP250	0	genome.wustl.edu	37	20	34084421	34084421	+	Silent	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	20	34084421	34084421	G	C	SNP	CEP250	ENST00000397527	human	ensembl	69_37n	+1	known	silent	c.3183	p.L1061	0.986	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001	18	0	0.00	40	25	38.46	-	-	-
CRYZ	0	genome.wustl.edu	37	1	75180309	75180309	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	75180309	75180309	C	G	SNP	CRYZ	ENST00000340866	human	ensembl	69_37n	-1	known	missense	c.434	p.C145S	0.008	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	CRYZ	HGNC	ENSG00000116791	53	0	0.00	56	16	22.22	-	-	-
CSMD3	0	genome.wustl.edu	37	8	114031335	114031335	+	Missense_Mutation	SNP	T	T	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	8	114031335	114031335	T	C	SNP	CSMD3	ENST00000297405	human	ensembl	69_37n	-1	known	missense	c.991	p.S331G	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	56	0	0.00	74	19	20.43	-	-	-
CYP4X1	0	genome.wustl.edu	37	1	47489663	47489663	+	Silent	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	47489663	47489663	G	A	SNP	CYP4X1	ENST00000371901	human	ensembl	69_37n	+1	known	silent	c.174	p.Q58	0.982	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4X1	HGNC	ENSG00000186377	75	0	0.00	58	29	33.33	-	-	-
DCAF11	0	genome.wustl.edu	37	14	24590084	24590084	+	Missense_Mutation	SNP	A	A	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	14	24590084	24590084	A	G	SNP	DCAF11	ENST00000446197	human	ensembl	69_37n	+1	known	missense	c.1130	p.Q377R	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p23,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p23,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	DCAF11	HGNC	ENSG00000100897	36	0	0.00	57	7	10.94	-	-	-
DEF8	0	genome.wustl.edu	37	16	90030911	90030911	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	16	90030911	90030911	G	A	SNP	DEF8	ENST00000268676	human	ensembl	69_37n	+1	known	missense	c.1364	p.R455K	1.000	smart_Prot_Kinase_C-like_PE/DAG-bd	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DEF8	HGNC	ENSG00000140995	54	0	0.00	78	23	22.77	-	-	-
DENND4A	0	genome.wustl.edu	37	15	65960402	65960402	+	Nonsense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	15	65960402	65960402	G	C	SNP	DENND4A	ENST00000443035	human	ensembl	69_37n	-1	known	nonsense	c.4844	p.S1615*	0.999	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,tigrfam_Pentatricopeptide_repeat	-	no_errors	DENND4A	HGNC	ENSG00000174485	60	0	0.00	65	20	23.53	-	-	-
DNAH9	0	genome.wustl.edu	37	17	11593039	11593039	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	17	11593039	11593039	C	G	SNP	DNAH9	ENST00000262442	human	ensembl	69_37n	+1	known	missense	c.3900	p.C1300W	0.060	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	22	0	0.00	16	26	60.47	-	-	-
DNAJC18	0	genome.wustl.edu	37	5	138778163	138778163	+	RNA	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	5	138778163	138778163	G	A	SNP	DNAJC18	ENST00000505268	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	DNAJC18	HGNC	ENSG00000170464	45	0	0.00	60	7	10.45	-	-	-
FBXW7	0	genome.wustl.edu	37	4	153249385	153249385	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	4	153249385	153249385	G	A	SNP	FBXW7	ENST00000281708	human	ensembl	69_37n	-1	known	missense	c.1393	p.R465C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom_cyclin-like,superfamily_WD40_repeat_dom,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_F-box_dom_cyclin-like,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FBXW7	HGNC	ENSG00000109670	71	0	0.00	47	39	45.35	-	-	-
FGB	0	genome.wustl.edu	37	4	155487118	155487118	+	Silent	SNP	T	T	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	4	155487118	155487118	T	C	SNP	FGB	ENST00000302068	human	ensembl	69_37n	+1	known	silent	c.273	p.D91	1.000	pfam_Fibrinogen_a/b/g_coil_dom	pfam_Fibrinogen_a/b/g_C,pfam_Fibrinogen_a/b/g_coil_dom,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	-	no_errors	FGB	HGNC	ENSG00000171564	16	0	0.00	11	19	63.33	-	-	-
FLNC	0	genome.wustl.edu	37	7	128491319	128491319	+	Missense_Mutation	SNP	A	A	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	7	128491319	128491319	A	G	SNP	FLNC	ENST00000325888	human	ensembl	69_37n	+1	known	missense	c.5573	p.N1858S	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	63	0	0.00	60	15	19.74	-	-	-
FRY	0	genome.wustl.edu	37	13	32811953	32811953	+	Missense_Mutation	SNP	A	A	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	13	32811953	32811953	A	G	SNP	FRY	ENST00000380250	human	ensembl	69_37n	+1	known	missense	c.6248	p.E2083G	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910	13	0	0.00	24	22	47.83	-	-	-
GOLGA8J	0	genome.wustl.edu	37	15	30437636	30437636	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	15	30437636	30437636	G	A	SNP	GOLGA8J	ENST00000569052	human	ensembl	69_37n	+1	novel	missense	c.1762	p.A588T	0.079	NULL	NULL	-	no_errors	RP5-1086D14.3	Clone_based_vega_gene	ENSG00000261247	15	0	0.00	0	3	100.00	-	-	-
GUCY2C	0	genome.wustl.edu	37	12	14829904	14829904	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	12	14829904	14829904	C	T	SNP	GUCY2C	ENST00000261170	human	ensembl	69_37n	-1	known	missense	c.832	p.D278N	0.527	pfam_ANF_lig-bd_rcpt	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019	48	0	0.00	48	17	26.15	-	-	-
HK3	0	genome.wustl.edu	37	5	176308172	176308172	+	Missense_Mutation	SNP	A	A	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	5	176308172	176308172	A	C	SNP	HK3	ENST00000292432	human	ensembl	69_37n	-1	known	missense	c.2674	p.C892G	0.995	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK3	HGNC	ENSG00000160883	27	0	0.00	31	15	32.61	-	-	-
HSD17B7	0	genome.wustl.edu	37	1	162770091	162770091	+	RNA	SNP	A	A	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	162770091	162770091	A	T	SNP	HSD17B7	ENST00000470195	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HSD17B7	HGNC	ENSG00000132196	49	0	0.00	41	60	59.41	-	-	-
HSF2BP	0	genome.wustl.edu	37	21	45050302	45050302	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	21	45050302	45050302	G	C	SNP	HSF2BP	ENST00000291560	human	ensembl	69_37n	-1	known	missense	c.475	p.Q159E	0.716	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HSF2BP	HGNC	ENSG00000160207	35	0	0.00	33	10	23.26	-	-	-
IGSF23	0	genome.wustl.edu	37	19	45117195	45117195	+	Silent	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	19	45117195	45117195	G	C	SNP	IGSF23	ENST00000592507	human	ensembl	69_37n	+1	putative	silent	c.18	p.V6	0.000	NULL	NULL	-	no_stop_codon:bad_bp_length_for_coding_region	IGSF23	HGNC	ENSG00000216588	28	0	0.00	36	8	18.18	-	-	-
IL29	0	genome.wustl.edu	37	19	39789125	39789125	+	Missense_Mutation	SNP	T	T	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	19	39789125	39789125	T	G	SNP	IL29	ENST00000333625	human	ensembl	69_37n	+1	known	missense	c.572	p.L191R	0.008	NULL	NULL	-	no_errors	IL29	HGNC	ENSG00000182393	90	0	0.00	131	16	10.88	-	-	-
IMMP2L	0	genome.wustl.edu	37	7	111161425	111161425	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	7	111161425	111161425	C	G	SNP	IMMP2L	ENST00000331762	human	ensembl	69_37n	-1	known	missense	c.79	p.V27L	1.000	tigrfam_Pept_S26A_signal_pept_1	pfam_Peptidase_S24_S26,superfamily_Peptidase_S24_S26A/B/C,prints_Pept_S26A_signal_pept_1,tigrfam_Pept_S26A_signal_pept_1	-	no_errors	IMMP2L	HGNC	ENSG00000184903	44	0	0.00	50	9	15.00	-	-	-
KLC3	0	genome.wustl.edu	37	19	45851372	45851372	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	19	45851372	45851372	C	G	SNP	KLC3	ENST00000470402	human	ensembl	69_37n	+1	known	missense	c.775	p.H259D	1.000	pfam_Rabaptin_Rab5-bd_dom,pfscan_TPR-contain_dom	pfam_Rabaptin_Rab5-bd_dom,pfam_TPR-1,smart_TPR_repeat,prints_Kinesin_light,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KLC3	HGNC	ENSG00000104892	78	0	0.00	68	25	26.88	-	-	-
KRTAP10-3	0	genome.wustl.edu	37	21	45978529	45978529	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	21	45978529	45978529	C	T	SNP	KRTAP10-3	ENST00000391620	human	ensembl	69_37n	-1	known	missense	c.70	p.E24K	1.000	NULL	NULL	-	no_errors	KRTAP10-3	HGNC	ENSG00000212935	63	0	0.00	76	11	12.64	-	-	-
LGR5	0	genome.wustl.edu	37	12	71898466	71898466	+	Splice_Site	SNP	G	G	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	12	71898466	71898466	G	T	SNP	LGR5	ENST00000266674	human	ensembl	69_37n	+1	known	splice_site	c.284+1	e2+1	1.000	-	-	-	no_errors	LGR5	HGNC	ENSG00000139292	58	0	0.00	83	12	12.63	-	-	-
MEPCE	0	genome.wustl.edu	37	7	100028728	100028728	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	7	100028728	100028728	C	T	SNP	MEPCE	ENST00000310512	human	ensembl	69_37n	+1	known	missense	c.1087	p.R363C	1.000	NULL	pfam_Bin3	-	no_errors	MEPCE	HGNC	ENSG00000146834	35	0	0.00	20	30	57.69	-	-	-
METAP1	0	genome.wustl.edu	37	4	99944097	99944097	+	RNA	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	4	99944097	99944097	G	A	SNP	METAP1	ENST00000506548	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	METAP1	HGNC	ENSG00000164024	9	0	0.00	11	7	38.89	-	-	-
MND1	0	genome.wustl.edu	37	4	154271274	154271274	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	4	154271274	154271274	C	G	SNP	MND1	ENST00000240488	human	ensembl	69_37n	+1	known	missense	c.62	p.S21C	1.000	pfam_Mnd1,pfam_Pencillinase_R,pirsf_Mnd1	pfam_Mnd1,pfam_Pencillinase_R,pirsf_Mnd1	-	no_errors	MND1	HGNC	ENSG00000121211	35	0	0.00	36	31	46.27	-	-	-
MS4A10	0	genome.wustl.edu	37	11	60565929	60565929	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	11	60565929	60565929	C	T	SNP	MS4A10	ENST00000308287	human	ensembl	69_37n	+1	known	missense	c.664	p.P222S	0.003	NULL	pfam_CD20-like	-	no_errors	MS4A10	HGNC	ENSG00000172689	60	0	0.00	61	42	40.78	-	-	-
MUC12	0	genome.wustl.edu	37	7	100643155	100643155	+	Missense_Mutation	SNP	A	A	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	7	100643155	100643155	A	T	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.9740	p.K3247I	0.000	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	22	0	0.00	28	7	20.00	-	-	-
MUC21	0	genome.wustl.edu	37	6	30955119	30955119	+	Silent	SNP	A	A	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	6	30955119	30955119	A	T	SNP	MUC21	ENST00000376296	human	ensembl	69_37n	+1	known	silent	c.1167	p.T389	0.074	NULL	NULL	-	no_errors	MUC21	HGNC	ENSG00000204544	52	0	0.00	52	8	13.33	-	-	-
MUC4	0	genome.wustl.edu	37	3	195509449	195509449	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	3	195509449	195509449	G	A	SNP	MUC4	ENST00000463781	human	ensembl	69_37n	-1	known	missense	c.9002	p.A3001V	0.002	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EGF-like,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	35	0	0.00	29	7	19.44	-	-	-
NLRP3	0	genome.wustl.edu	37	1	247587695	247587695	+	Missense_Mutation	SNP	C	C	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	247587695	247587695	C	A	SNP	NLRP3	ENST00000336119	human	ensembl	69_37n	+1	known	missense	c.950	p.P317Q	0.003	pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711	13	0	0.00	17	20	54.05	-	-	-
OR51A2	0	genome.wustl.edu	37	11	4976926	4976926	+	Silent	SNP	T	T	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	11	4976926	4976926	T	A	SNP	OR51A2	ENST00000380371	human	ensembl	69_37n	-1	known	silent	c.18	p.T6	0.001	NULL	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR51A2	HGNC	ENSG00000205496	58	0	0.00	48	37	43.53	-	-	-
OR5B3	0	genome.wustl.edu	37	11	58170355	58170355	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	11	58170355	58170355	G	C	SNP	OR5B3	ENST00000309403	human	ensembl	69_37n	-1	known	missense	c.528	p.F176L	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5B3	HGNC	ENSG00000172769	26	0	0.00	34	16	32.00	-	-	-
OTOGL	0	genome.wustl.edu	37	12	80730698	80730698	+	Missense_Mutation	SNP	T	T	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	12	80730698	80730698	T	G	SNP	OTOGL	ENST00000458043	human	ensembl	69_37n	+1	known	missense	c.4747	p.S1583A	0.061	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_AbfB,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	OTOGL	HGNC	ENSG00000165899	35	0	0.00	22	8	26.67	-	-	-
PDLIM5	0	genome.wustl.edu	37	4	95498545	95498545	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	4	95498545	95498545	C	G	SNP	PDLIM5	ENST00000538141	human	ensembl	69_37n	+1	known	missense	c.312	p.S104R	0.268	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDLIM5	HGNC	ENSG00000163110	23	0	0.00	36	29	44.62	-	-	-
PINK1	0	genome.wustl.edu	37	1	20972049	20972049	+	RNA	SNP	C	C	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	20972049	20972049	C	A	SNP	PINK1	ENST00000400490	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.393	-	-	-	no_errors	PINK1	HGNC	ENSG00000158828	51	0	0.00	40	21	34.43	-	-	-
PIWIL1	0	genome.wustl.edu	37	12	130839167	130839167	+	Missense_Mutation	SNP	C	C	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	12	130839167	130839167	C	A	SNP	PIWIL1	ENST00000245255	human	ensembl	69_37n	+1	known	missense	c.1130	p.P377Q	0.917	pfam_PAZ,superfamily_PAZ,smart_PAZ,pfscan_PAZ	pfam_Piwi,pfam_PAZ,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	45	0	0.00	26	29	52.73	-	-	-
PTPRA	0	genome.wustl.edu	37	20	2985753	2985753	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	20	2985753	2985753	G	A	SNP	PTPRA	ENST00000425918	human	ensembl	69_37n	+1	known	missense	c.823	p.E275K	1.000	pirsf_Tyr_Pase_rcpt_a/e-type,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRA	HGNC	ENSG00000132670	95	0	0.00	116	30	20.55	-	-	-
RASGRP2	0	genome.wustl.edu	37	11	64508450	64508450	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	11	64508450	64508450	C	T	SNP	RASGRP2	ENST00000377494	human	ensembl	69_37n	-1	known	missense	c.341	p.R114Q	0.997	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRP2	HGNC	ENSG00000068831	36	0	0.00	63	9	12.50	-	-	-
RASSF5	0	genome.wustl.edu	37	1	206757788	206757788	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	206757788	206757788	G	C	SNP	RASSF5	ENST00000355294	human	ensembl	69_37n	+1	known	missense	c.760	p.A254P	0.850	NULL	pfam_Ras-assoc,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SARAH,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	RASSF5	HGNC	ENSG00000136653	35	0	0.00	43	24	34.78	-	-	-
RESP18	0	genome.wustl.edu	37	2	220197269	220197269	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	2	220197269	220197269	C	G	SNP	RESP18	ENST00000333527	human	ensembl	69_37n	-1	putative	missense	c.209	p.G70A	0.055	NULL	NULL	-	no_errors	RESP18	HGNC	ENSG00000182698	51	0	0.00	68	16	19.05	-	-	-
RHPN1	0	genome.wustl.edu	37	8	144463488	144463488	+	Nonsense_Mutation	SNP	A	A	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	8	144463488	144463488	A	T	SNP	RHPN1	ENST00000289013	human	ensembl	69_37n	+1	known	nonsense	c.1462	p.K488*	0.001	pfam_BRO1_dom	pfam_BRO1_dom,pfam_HR1_rho-bd,pfam_PDZ,superfamily_PDZ,superfamily_HR1_rho-bd,smart_HR1_rho-bd,smart_PDZ,pfscan_BRO1_dom,pfscan_PDZ	-	no_errors	RHPN1	HGNC	ENSG00000158106	36	0	0.00	69	28	28.87	-	-	-
RPS6KA1	0	genome.wustl.edu	37	1	26887564	26887564	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	26887564	26887564	C	T	SNP	RPS6KA1	ENST00000531382	human	ensembl	69_37n	+1	known	missense	c.1397	p.S466L	0.999	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA1	HGNC	ENSG00000117676	30	0	0.00	17	16	48.48	-	-	-
RRNAD1	0	genome.wustl.edu	37	1	156704177	156704177	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	156704177	156704177	C	G	SNP	RRNAD1	ENST00000368216	human	ensembl	69_37n	+1	known	missense	c.1013	p.T338S	0.992	NULL	NULL	-	no_errors	RRNAD1	HGNC	ENSG00000143303	51	0	0.00	118	23	16.08	-	-	-
RYR2	0	genome.wustl.edu	37	1	237804204	237804204	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	237804204	237804204	G	C	SNP	RYR2	ENST00000360064	human	ensembl	69_37n	+1	known	missense	c.7117	p.E2373Q	0.850	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	93	0	0.00	97	40	29.20	-	-	-
SAGE1	0	genome.wustl.edu	37	X	134993474	134993474	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	X	134993474	134993474	G	C	SNP	SAGE1	ENST00000324447	human	ensembl	69_37n	+1	known	missense	c.2129	p.R710T	0.002	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433	54	0	0.00	68	32	32.00	-	-	-
SI	0	genome.wustl.edu	37	3	164716431	164716431	+	Silent	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	3	164716431	164716431	C	T	SNP	SI	ENST00000264382	human	ensembl	69_37n	-1	known	silent	c.4437	p.G1479	0.997	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Glyco_hydro-type_carb-bd,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402	67	0	0.00	74	15	16.85	-	-	-
SIGLEC1	0	genome.wustl.edu	37	20	3673310	3673310	+	Nonsense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	20	3673310	3673310	G	A	SNP	SIGLEC1	ENST00000419548	human	ensembl	69_37n	-1	known	nonsense	c.328	p.Q110*	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	smart_Ig_sub2,smart_Ig_sub,pfscan_Ig-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	SIGLEC1	HGNC	ENSG00000088827	62	0	0.00	54	34	38.64	-	-	-
SIM1	0	genome.wustl.edu	37	6	100841736	100841736	+	Silent	SNP	T	T	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	6	100841736	100841736	T	C	SNP	SIM1	ENST00000262901	human	ensembl	69_37n	-1	known	silent	c.1197	p.E399	0.997	pfam_SIM_C	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,smart_PAS,smart_PAC,pfscan_PAS,pfscan_HLH_DNA-bd	-	no_errors	SIM1	HGNC	ENSG00000112246	13	0	0.00	29	11	27.50	-	-	-
SLC16A2	0	genome.wustl.edu	37	X	73744433	73744433	+	Frame_Shift_Del	DEL	T	T	-			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	X	73744433	73744433	T	-	DEL	SLC16A2	ENST00000276033	human	ensembl	69_37n	+1	known	frame_shift_del	c.1037	p.M348fs	0.999	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A2	HGNC	ENSG00000147100	98	0	0.00	92	40	30.30	-	-	-
SLC2A13	0	genome.wustl.edu	37	12	40158269	40158269	+	Silent	SNP	T	T	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	12	40158269	40158269	T	C	SNP	SLC2A13	ENST00000280871	human	ensembl	69_37n	-1	known	silent	c.1713	p.T571	0.997	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,superfamily_Plexin-like_fold,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A13	HGNC	ENSG00000151229	37	0	0.00	56	16	22.22	-	-	-
SLC5A3	0	genome.wustl.edu	37	21	35469199	35469199	+	Missense_Mutation	SNP	C	C	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	21	35469199	35469199	C	A	SNP	SLC5A3	ENST00000381151	human	ensembl	69_37n	+1	known	missense	c.1702	p.Q568K	1.000	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A3	HGNC	ENSG00000198743	32	0	0.00	41	11	21.15	-	-	-
SLC6A8	0	genome.wustl.edu	37	X	152956984	152956984	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	X	152956984	152956984	G	A	SNP	SLC6A8	ENST00000253122	human	ensembl	69_37n	+1	known	missense	c.620	p.R207Q	0.998	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport_creatine	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_creatine	-	no_errors	SLC6A8	HGNC	ENSG00000130821	69	0	0.00	105	32	23.36	-	-	-
SP1	0	genome.wustl.edu	37	12	53776138	53776138	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	12	53776138	53776138	C	G	SNP	SP1	ENST00000327443	human	ensembl	69_37n	+1	known	missense	c.407	p.S136C	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP1	HGNC	ENSG00000185591	27	0	0.00	44	7	13.73	-	-	-
STARD6	0	genome.wustl.edu	37	18	51858148	51858148	+	Missense_Mutation	SNP	T	T	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	18	51858148	51858148	T	C	SNP	STARD6	ENST00000307844	human	ensembl	69_37n	-1	known	missense	c.349	p.I117V	0.023	pfam_START_lipid-bd,smart_START_lipid-bd,pfscan_START_lipid-bd	pfam_START_lipid-bd,smart_START_lipid-bd,pfscan_START_lipid-bd	-	no_errors	STARD6	HGNC	ENSG00000174448	54	0	0.00	65	26	28.57	-	-	-
SWT1	0	genome.wustl.edu	37	1	185173860	185173860	+	Silent	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	185173860	185173860	G	A	SNP	SWT1	ENST00000367500	human	ensembl	69_37n	+1	known	silent	c.1698	p.K566	0.000	NULL	smart_PINc_nuc-bd	-	no_errors	SWT1	HGNC	ENSG00000116668	32	0	0.00	59	12	16.90	-	-	-
TANC1	0	genome.wustl.edu	37	2	160006963	160006963	+	Nonsense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	2	160006963	160006963	C	G	SNP	TANC1	ENST00000263635	human	ensembl	69_37n	+1	known	nonsense	c.578	p.S193*	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC1	HGNC	ENSG00000115183	62	0	0.00	22	18	45.00	-	-	-
TATDN2	0	genome.wustl.edu	37	3	10291219	10291219	+	Nonsense_Mutation	SNP	C	C	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	3	10291219	10291219	C	A	SNP	TATDN2	ENST00000287652	human	ensembl	69_37n	+1	known	nonsense	c.335	p.S112*	0.031	NULL	pfam_TatD_superfamily	-	no_errors	TATDN2	HGNC	ENSG00000157014	12	0	0.00	24	9	27.27	-	-	-
TECTA	0	genome.wustl.edu	37	11	121000467	121000467	+	Missense_Mutation	SNP	A	A	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	11	121000467	121000467	A	T	SNP	TECTA	ENST00000264037	human	ensembl	69_37n	+1	known	missense	c.2488	p.I830L	0.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_Zona_pellucida_Endoglin/CD105,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EGF-like,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105	-	no_errors	TECTA	HGNC	ENSG00000109927	61	0	0.00	32	36	52.94	-	-	-
THAP1	0	genome.wustl.edu	37	8	42693372	42693372	+	Silent	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	8	42693372	42693372	G	A	SNP	THAP1	ENST00000254250	human	ensembl	69_37n	-1	known	silent	c.375	p.T125	1.000	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP1	HGNC	ENSG00000131931	25	0	0.00	20	16	44.44	-	-	-
TIAM1	0	genome.wustl.edu	37	21	32638444	32638444	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	21	32638444	32638444	G	C	SNP	TIAM1	ENST00000286827	human	ensembl	69_37n	-1	known	missense	c.845	p.P282R	0.092	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299	78	0	0.00	94	20	17.54	-	-	-
TNIP3	0	genome.wustl.edu	37	4	122059806	122059806	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	4	122059806	122059806	G	A	SNP	TNIP3	ENST00000057513	human	ensembl	69_37n	-1	known	missense	c.919	p.P307S	1.000	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730	55	0	0.00	59	26	30.59	-	-	-
TNIP3	0	genome.wustl.edu	37	4	122071373	122071373	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	4	122071373	122071373	G	C	SNP	TNIP3	ENST00000057513	human	ensembl	69_37n	-1	known	missense	c.494	p.A165G	0.997	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730	33	0	0.00	47	10	17.54	-	-	-
TP53	0	genome.wustl.edu	37	17	7578462	7578464	+	In_Frame_Del	DEL	GCG	GCG	-			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	GCG	GCG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	17	7578462	7578464	GCG	-	DEL	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	in_frame_del	c.468_466	p.R156in_frame_del	0.000:0.019:0.010	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	29	0	0.00	19	14	42.42	-	-	-
TPH2	0	genome.wustl.edu	37	12	72355404	72355404	+	Nonsense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	12	72355404	72355404	C	G	SNP	TPH2	ENST00000546576	human	ensembl	69_37n	+1	known	nonsense	c.680	p.S227*	0.000	NULL	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C	-	no_errors	TPH2	HGNC	ENSG00000139287	78	0	0.00	104	20	16.13	-	-	-
TRAPPC9	0	genome.wustl.edu	37	8	141468548	141468548	+	Missense_Mutation	SNP	G	G	A			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	8	141468548	141468548	G	A	SNP	TRAPPC9	ENST00000389328	human	ensembl	69_37n	-1	known	missense	c.116	p.A39V	0.000	NULL	pfam_TRAPP_II_complex_Trs120	-	no_errors	TRAPPC9	HGNC	ENSG00000167632	82	0	0.00	133	25	15.62	-	-	-
TRIP11	0	genome.wustl.edu	37	14	92474126	92474126	+	Missense_Mutation	SNP	T	T	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	14	92474126	92474126	T	C	SNP	TRIP11	ENST00000267622	human	ensembl	69_37n	-1	known	missense	c.1385	p.D462G	0.002	NULL	superfamily_Ribosomal_L29,pfscan_GRIP	-	no_errors	TRIP11	HGNC	ENSG00000100815	70	0	0.00	30	61	67.03	-	-	-
TSSC1	0	genome.wustl.edu	37	2	3357043	3357043	+	Missense_Mutation	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	2	3357043	3357043	C	T	SNP	TSSC1	ENST00000406835	human	ensembl	69_37n	-1	known	missense	c.178	p.V60I	0.004	NULL	NULL	-	no_errors	TSSC1	HGNC	ENSG00000032389	83	0	0.00	81	31	27.68	-	-	-
TTC39B	0	genome.wustl.edu	37	9	15190604	15190604	+	Silent	SNP	T	T	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	9	15190604	15190604	T	G	SNP	TTC39B	ENST00000512701	human	ensembl	69_37n	-1	known	silent	c.1053	p.A351	0.044	pfam_OMP_IML2_mit/TPR_39	pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat	-	no_errors	TTC39B	HGNC	ENSG00000155158	34	0	0.00	42	20	32.26	-	-	-
UBAP2	0	genome.wustl.edu	37	9	33934266	33934266	+	RNA	SNP	A	A	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	9	33934266	33934266	A	T	SNP	UBAP2	ENST00000474372	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	UBAP2	HGNC	ENSG00000137073	15	0	0.00	20	9	31.03	-	-	-
UNC80	0	genome.wustl.edu	37	2	210742807	210742807	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	2	210742807	210742807	G	C	SNP	UNC80	ENST00000439458	human	ensembl	69_37n	+1	known	missense	c.3976	p.D1326H	1.000	NULL	NULL	-	no_errors	UNC80	HGNC	ENSG00000144406	30	0	0.00	60	9	12.68	-	-	-
USP24	0	genome.wustl.edu	37	1	55589148	55589148	+	Silent	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	55589148	55589148	C	T	SNP	USP24	ENST00000294383	human	ensembl	69_37n	-1	known	silent	c.4248	p.T1416	0.029	superfamily_ARM-type_fold	pfam_Peptidase_C19,superfamily_UBA-like,superfamily_ARM-type_fold,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19	-	no_errors	USP24	HGNC	ENSG00000162402	36	0	0.00	41	24	36.36	-	-	-
XIRP2	0	genome.wustl.edu	37	2	168107125	168107125	+	Missense_Mutation	SNP	G	G	C			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	2	168107125	168107125	G	C	SNP	XIRP2	ENST00000295237	human	ensembl	69_37n	+1	known	missense	c.9223	p.A3075P	0.004	superfamily_FH2_actin-bd	pfam_Actin-binding_Xin_repeat,superfamily_FH2_actin-bd	-	no_errors	XIRP2	HGNC	ENSG00000163092	8	0	0.00	30	6	16.67	-	-	-
ZC3H3	0	genome.wustl.edu	37	8	144550658	144550658	+	Missense_Mutation	SNP	C	C	G			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	8	144550658	144550658	C	G	SNP	ZC3H3	ENST00000262577	human	ensembl	69_37n	-1	known	missense	c.1999	p.E667Q	0.957	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164	67	0	0.00	117	23	16.43	-	-	-
ZDHHC8P1	0	genome.wustl.edu	37	22	23742579	23742579	+	RNA	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	22	23742579	23742579	C	T	SNP	ZDHHC8P1	ENST00000255890	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	ZDHHC8P1	HGNC	ENSG00000133519	9	0	0.00	13	16	55.17	-	-	-
ZRANB2	0	genome.wustl.edu	37	1	71529633	71529633	+	RNA	SNP	C	C	T			TCGA-GM-A3XL-01A-11D-A22X-09	TCGA-GM-A3XL-10A-01D-A22X-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b27d75ba-5989-4200-bfe9-f1b7d7cf8008	90469bfb-140c-4856-be28-a9b04c183157	1	71529633	71529633	C	T	SNP	ZRANB2	ENST00000477096	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZRANB2	HGNC	ENSG00000132485	36	0	0.00	62	14	18.42	-	-	-
