Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABHD2	0	genome.wustl.edu	37	15	89731451	89731451	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	15	89731451	89731451	G	C	SNP	ABHD2	ENST00000352732	human	ensembl	69_37n	+1	known	missense	c.843	p.K281N	1.000	pfam_AB_hydrolase_1,pirsf_AB-Hydro_YheT	pfam_AB_hydrolase_1,pirsf_AB-Hydro_YheT	-	no_errors	ABHD2	HGNC	ENSG00000140526	38	0	0.00	24	4	14.29	-	-	-
CPNE8	0	genome.wustl.edu	37	12	39170041	39170041	+	Missense_Mutation	SNP	C	C	G			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	12	39170041	39170041	C	G	SNP	CPNE8	ENST00000331366	human	ensembl	69_37n	-1	known	missense	c.470	p.R157T	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_Copine,pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_VWF_A,pfscan_C2_membr_targeting,pfscan_VWF_A	-	no_errors	CPNE8	HGNC	ENSG00000139117	106	0	0.00	57	7	10.94	-	-	-
CRBN	0	genome.wustl.edu	37	3	3192638	3192638	+	Missense_Mutation	SNP	A	A	G			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	3	3192638	3192638	A	G	SNP	CRBN	ENST00000231948	human	ensembl	69_37n	-1	known	missense	c.1240	p.F414L	1.000	NULL	pfam_Pept_S16_N,superfamily_PUA-like_domain,smart_Pept_S16_N	-	no_errors	CRBN	HGNC	ENSG00000113851	75	0	0.00	46	7	13.21	-	-	-
CTTNBP2	0	genome.wustl.edu	37	7	117501284	117501284	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	7	117501284	117501284	G	T	SNP	CTTNBP2	ENST00000160373	human	ensembl	69_37n	-1	known	missense	c.168	p.D56E	1.000	pfam_Cortactin-binding_p2_N	pfam_Cortactin-binding_p2_N,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CTTNBP2	HGNC	ENSG00000077063	32	0	0.00	15	4	21.05	-	-	-
CYP4A11	0	genome.wustl.edu	37	1	47402424	47402424	+	Missense_Mutation	SNP	T	T	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	1	47402424	47402424	T	C	SNP	CYP4A11	ENST00000371904	human	ensembl	69_37n	-1	known	missense	c.422	p.Q141R	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-II	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP4A11	HGNC	ENSG00000187048	57	0	0.00	33	4	10.81	-	-	-
DDX11	0	genome.wustl.edu	37	12	31249874	31249874	+	Missense_Mutation	SNP	C	C	A			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	12	31249874	31249874	C	A	SNP	DDX11	ENST00000407793	human	ensembl	69_37n	+1	known	missense	c.1712	p.A571E	0.008	tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573	100	0	0.00	51	9	15.00	-	-	-
ENSG00000255185	0	genome.wustl.edu	37	16	70070460	70070460	+	RNA	SNP	T	T	A			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	16	70070460	70070460	T	A	SNP	ENSG00000255185	ENST00000527016	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-106J23.2	Clone_based_vega_gene	ENSG00000255185	103	0	0.00	68	9	11.69	-	-	-
FAAH	0	genome.wustl.edu	37	1	46874204	46874204	+	Missense_Mutation	SNP	T	T	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	1	46874204	46874204	T	C	SNP	FAAH	ENST00000243167	human	ensembl	69_37n	+1	known	missense	c.1025	p.M342T	1.000	pfam_Amidase,superfamily_Amidase_dom,pirsf_Amidase_fun	pfam_Amidase,superfamily_Amidase_dom,pirsf_Amidase_fun	-	no_errors	FAAH	HGNC	ENSG00000117480	71	0	0.00	45	5	10.00	-	-	-
FAT1	0	genome.wustl.edu	37	4	187541716	187541716	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	4	187541716	187541716	G	C	SNP	FAT1	ENST00000441802	human	ensembl	69_37n	-1	known	missense	c.6024	p.I2008M	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	35	0	0.00	27	6	17.65	-	-	-
FREM2	0	genome.wustl.edu	37	13	39263585	39263585	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	13	39263585	39263585	G	C	SNP	FREM2	ENST00000280481	human	ensembl	69_37n	+1	known	missense	c.2104	p.E702Q	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	86	0	0.00	44	10	18.52	-	-	-
GLB1	0	genome.wustl.edu	37	3	33099722	33099722	+	Missense_Mutation	SNP	C	C	G			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	3	33099722	33099722	C	G	SNP	GLB1	ENST00000445488	human	ensembl	69_37n	-1	known	missense	c.736	p.D246H	0.012	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1	HGNC	ENSG00000170266	24	0	0.00	23	7	23.33	-	-	-
HCFC1	0	genome.wustl.edu	37	X	153220381	153220381	+	Missense_Mutation	SNP	C	C	G			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	X	153220381	153220381	C	G	SNP	HCFC1	ENST00000310441	human	ensembl	69_37n	-1	known	missense	c.3469	p.E1157Q	0.000	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	64	0	0.00	61	9	12.86	-	-	-
HPCAL4	0	genome.wustl.edu	37	1	40149691	40149691	+	Missense_Mutation	SNP	T	T	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	1	40149691	40149691	T	C	SNP	HPCAL4	ENST00000372844	human	ensembl	69_37n	-1	known	missense	c.296	p.Q99R	1.000	pfscan_EF_HAND_2,prints_Recoverin	pfam_EF-hand,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2,prints_Recoverin	-	no_errors	HPCAL4	HGNC	ENSG00000116983	76	0	0.00	29	4	12.12	-	-	-
LAIR2	0	genome.wustl.edu	37	19	55020268	55020268	+	Missense_Mutation	SNP	C	C	A			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	19	55020268	55020268	C	A	SNP	LAIR2	ENST00000301202	human	ensembl	69_37n	+1	known	missense	c.388	p.P130T	0.001	NULL	smart_Ig_sub	-	no_errors	LAIR2	HGNC	ENSG00000167618	62	0	0.00	41	5	10.87	-	-	-
LARP4B	0	genome.wustl.edu	37	10	931654	931654	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	10	931654	931654	G	T	SNP	LARP4B	ENST00000316157	human	ensembl	69_37n	-1	known	missense	c.8	p.S3Y	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929	51	0	0.00	18	3	14.29	-	-	-
MAGEB10	0	genome.wustl.edu	37	X	27840129	27840129	+	Missense_Mutation	SNP	A	A	G			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	X	27840129	27840129	A	G	SNP	MAGEB10	ENST00000356790	human	ensembl	69_37n	+1	known	missense	c.706	p.I236V	0.002	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB10	HGNC	ENSG00000177689	27	0	0.00	15	3	16.67	-	-	-
MCM3AP-AS1	0	genome.wustl.edu	37	21	47662235	47662235	+	RNA	DEL	T	T	-			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	21	47662235	47662235	T	-	DEL	MCM3AP-AS1	ENST00000421927	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.165	-	-	-	no_errors	MCM3AP-AS1	HGNC	ENSG00000215424	34	0	0.00	21	6	20.69	-	-	-
MYO10	0	genome.wustl.edu	37	5	16680162	16680162	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	5	16680162	16680162	G	T	SNP	MYO10	ENST00000513610	human	ensembl	69_37n	-1	known	missense	c.4436	p.T1479N	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555	80	0	0.00	60	9	13.04	-	-	-
NTMT1	0	genome.wustl.edu	37	9	132397566	132397566	+	Nonsense_Mutation	SNP	C	C	G			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	9	132397566	132397566	C	G	SNP	NTMT1	ENST00000372481	human	ensembl	69_37n	+1	known	nonsense	c.410	p.S137*	1.000	NULL	pfam_DUF858_MeTrfase_lik	-	no_errors	NTMT1	HGNC	ENSG00000148335	44	0	0.00	27	5	15.62	-	-	-
NUPL2	0	genome.wustl.edu	37	7	23239802	23239802	+	Missense_Mutation	SNP	A	A	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	7	23239802	23239802	A	C	SNP	NUPL2	ENST00000258742	human	ensembl	69_37n	+1	known	missense	c.710	p.N237T	0.000	NULL	smart_Znf_CCCH	-	no_errors	NUPL2	HGNC	ENSG00000136243	31	0	0.00	18	5	21.74	-	-	-
OR10C1	0	genome.wustl.edu	37	6	29407976	29407976	+	Silent	SNP	C	C	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	6	29407976	29407976	C	T	SNP	OR10C1	ENST00000444197	human	ensembl	69_37n	+1	known	silent	c.184	p.L62	0.996	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10C1	HGNC	ENSG00000206474	38	0	0.00	46	12	20.69	-	-	-
PCSK4	0	genome.wustl.edu	37	19	1482188	1482188	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	19	1482188	1482188	T	-	DEL	PCSK4	ENST00000300954	human	ensembl	69_37n	-1	known	frame_shift_del	c.1838	p.Y613fs	0.271	superfamily_Growth_fac_rcpt	pfam_Peptidase_S8/S53,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,superfamily_Growth_fac_rcpt,smart_Furin_repeat,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK4	HGNC	ENSG00000115257	8	0	0.00	4	2	33.33	-	-	-
PHPT1	0	genome.wustl.edu	37	9	139745248	139745248	+	Silent	SNP	C	C	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	9	139745248	139745248	C	T	SNP	PHPT1	ENST00000247665	human	ensembl	69_37n	+1	known	silent	c.327	p.I109	1.000	pfam_Ocnus	pfam_Ocnus	-	no_errors	PHPT1	HGNC	ENSG00000054148	96	0	0.00	52	6	10.34	-	-	-
PKD1	0	genome.wustl.edu	37	16	2149969	2149969	+	Missense_Mutation	SNP	A	A	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	16	2149969	2149969	A	C	SNP	PKD1	ENST00000567946	human	ensembl	69_37n	-1	novel	missense	c.1418	p.V473G	0.903	NULL	pfam_LipOase_LH2,pfam_GPS_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_LipOase_LH2,pfscan_GPS_dom,pfscan_LipOase_LH2,pfscan_REJ-like,prints_PKD_1	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PKD1	HGNC	ENSG00000008710	147	0	0.00	111	20	15.27	-	-	-
PKLR	0	genome.wustl.edu	37	1	155265234	155265234	+	Silent	SNP	C	C	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	1	155265234	155265234	C	T	SNP	PKLR	ENST00000342741	human	ensembl	69_37n	-1	known	silent	c.501	p.L167	1.000	pfam_Pyrv_Knase_brl,superfamily_Pyrv/PenolPyrv_Kinase,superfamily_Pyrv_Knase-like_insert_dom,tigrfam_Pyr_Knase	pfam_Pyrv_Knase_brl,pfam_Pyrv_Knase_C,superfamily_Pyrv/PenolPyrv_Kinase,superfamily_Pyrv_Knase_C,superfamily_Pyrv_Knase-like_insert_dom,prints_Pyr_Knase,tigrfam_Pyr_Knase	-	no_errors	PKLR	HGNC	ENSG00000143627	75	0	0.00	49	8	14.04	-	-	-
PLXNB3	0	genome.wustl.edu	37	X	153031697	153031697	+	Missense_Mutation	SNP	G	G	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	X	153031697	153031697	G	C	SNP	PLXNB3	ENST00000538966	human	ensembl	69_37n	+1	known	missense	c.32	p.C11S	0.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNB3	HGNC	ENSG00000198753	129	0	0.00	57	9	13.64	-	-	-
RBBP4	0	genome.wustl.edu	37	1	33123070	33123070	+	Silent	SNP	G	G	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	1	33123070	33123070	G	T	SNP	RBBP4	ENST00000373493	human	ensembl	69_37n	+1	known	silent	c.207	p.G69	0.921	pfam_Histone-bd_RBBP4	pfam_WD40_repeat,pfam_Histone-bd_RBBP4,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RBBP4	HGNC	ENSG00000162521	45	0	0.00	38	7	15.56	-	-	-
RNF6	0	genome.wustl.edu	37	13	26788508	26788508	+	Nonsense_Mutation	SNP	G	G	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	13	26788508	26788508	G	C	SNP	RNF6	ENST00000346166	human	ensembl	69_37n	-1	known	nonsense	c.1511	p.S504*	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF6	HGNC	ENSG00000127870	50	0	0.00	39	5	11.36	-	-	-
S100A3	0	genome.wustl.edu	37	1	153520190	153520190	+	Missense_Mutation	SNP	C	C	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	1	153520190	153520190	C	T	SNP	S100A3	ENST00000368712	human	ensembl	69_37n	-1	known	missense	c.274	p.D92N	0.971	NULL	pfam_S100_Ca-bd_sub	-	no_errors	S100A3	HGNC	ENSG00000188015	75	0	0.00	36	10	21.74	-	-	-
SARDH	0	genome.wustl.edu	37	9	136535741	136535741	+	Silent	SNP	G	G	A			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	9	136535741	136535741	G	A	SNP	SARDH	ENST00000371872	human	ensembl	69_37n	-1	known	silent	c.2460	p.G820	0.999	pfam_GCV_T_C	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C	-	no_errors	SARDH	HGNC	ENSG00000123453	69	0	0.00	40	10	20.00	-	-	-
SGOL2	0	genome.wustl.edu	37	2	201438212	201438212	+	Missense_Mutation	SNP	C	C	A			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	2	201438212	201438212	C	A	SNP	SGOL2	ENST00000357799	human	ensembl	69_37n	+1	known	missense	c.3143	p.T1048N	0.022	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535	19	0	0.00	15	4	21.05	-	-	-
SGPL1	0	genome.wustl.edu	37	10	72604367	72604367	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	10	72604367	72604367	G	T	SNP	SGPL1	ENST00000373202	human	ensembl	69_37n	+1	known	missense	c.165	p.W55C	0.997	NULL	pfam_PyrdxlP-dep_de-COase,pfam_Aminotrans_V/Cys_dSase,pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	SGPL1	HGNC	ENSG00000166224	71	0	0.00	36	4	10.00	-	-	-
SIX6	0	genome.wustl.edu	37	14	60976445	60976445	+	Missense_Mutation	SNP	T	T	G			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	14	60976445	60976445	T	G	SNP	SIX6	ENST00000327720	human	ensembl	69_37n	+1	known	missense	c.329	p.V110G	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	-	no_errors	SIX6	HGNC	ENSG00000184302	49	0	0.00	27	5	15.62	-	-	-
SRPK1	0	genome.wustl.edu	37	6	35806552	35806552	+	Missense_Mutation	SNP	G	G	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	6	35806552	35806552	G	T	SNP	SRPK1	ENST00000373822	human	ensembl	69_37n	-1	known	missense	c.1390	p.L464M	1.000	pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	SRPK1	HGNC	ENSG00000096063	33	0	0.00	34	4	10.53	-	-	-
TMEM63A	0	genome.wustl.edu	37	1	226040471	226040471	+	Splice_Site	SNP	C	C	T			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	1	226040471	226040471	C	T	SNP	TMEM63A	ENST00000366835	human	ensembl	69_37n	-1	known	splice_site	c.1798-1	e18-1	1.000	-	-	-	no_errors	TMEM63A	HGNC	ENSG00000196187	30	0	0.00	24	10	29.41	-	-	-
TMPRSS15	0	genome.wustl.edu	37	21	19698835	19698835	+	Missense_Mutation	SNP	A	A	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	21	19698835	19698835	A	C	SNP	TMPRSS15	ENST00000284885	human	ensembl	69_37n	-1	known	missense	c.1835	p.M612R	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_Peptidase_S1_S6,pfam_CUB,pfam_MAM_dom,pfam_SEA,pfam_LDrepeatLR_classA_rpt,pfam_Peptidase_S1A_nudel,pfam_Srcr_rcpt,superfamily_Pept_cys/ser_Trypsin-like,superfamily_ConA-like_lec_gl,superfamily_CUB,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_SEA,smart_LDrepeatLR_classA_rpt,smart_CUB,smart_MAM_dom,smart_Srcr_rcpt-rel,smart_Peptidase_S1_S6,pfscan_CUB,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,pfscan_SEA,pfscan_Srcr_rcpt,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	TMPRSS15	HGNC	ENSG00000154646	85	0	0.00	48	25	33.78	-	-	-
TP53	0	genome.wustl.edu	37	17	7578268	7578268	+	Missense_Mutation	SNP	A	A	C			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	17	7578268	7578268	A	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.581	p.L194R	0.996	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	51	0	0.00	34	8	19.05	-	-	-
TTN	0	genome.wustl.edu	37	2	179410788	179410788	+	Silent	SNP	G	G	A			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	2	179410788	179410788	G	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	silent	c.87471	p.C29157	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	31	0	0.00	19	3	13.64	-	-	-
ZNF549	0	genome.wustl.edu	37	19	58050116	58050116	+	Missense_Mutation	SNP	G	G	A			TCGA-LL-A5YO-01A-21D-A28B-09	TCGA-LL-A5YO-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5af23455-a0dc-4c6e-8577-e90599523caa	463b9a58-79b7-4b1c-abcb-25fe9c4de4e0	19	58050116	58050116	G	A	SNP	ZNF549	ENST00000376233	human	ensembl	69_37n	+1	known	missense	c.1744	p.E582K	0.890	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF549	HGNC	ENSG00000121406	34	0	0.00	19	3	13.64	-	-	-
