Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
NUP205	23165	broad.mit.edu	37	7	135300708	135300708	+	Missense_Mutation	SNP	A	A	G			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr7:135300708A>G	uc003vsw.3	+	23	3386	c.3355A>G	c.(3355-3357)Act>Gct	p.T1119A		NM_015135	NP_055950	Q92621	NU205_HUMAN	Homo sapiens nucleoporin 205kDa (NUP205), mRNA.	1119					carbohydrate metabolic process|glucose transport|mRNA transport|protein import into nucleus, docking|regulation of glucose transport|transmembrane transport|viral reproduction	nuclear pore	protein binding			breast(4)|central_nervous_system(2)|endometrium(9)|kidney(7)|large_intestine(17)|liver(4)|lung(36)|ovary(5)|prostate(1)|skin(2)|stomach(2)|upper_aerodigestive_tract(1)|urinary_tract(3)	93						GCTTATGAAAACTGCCTCAAT	0.393000													17	45					0	0	1	0	0
ZNF253	56242	broad.mit.edu	37	19	20002792	20002792	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr19:20002792C>T	uc002noj.3	+	3	828	c.736C>T	c.(736-738)Cat>Tat	p.H246Y	ZNF253_uc002nok.3_Missense_Mutation_p.H170Y|ZNF253_uc002nol.3_Non-coding_Transcript	NM_021047	NP_066385	O75346	ZN253_HUMAN	Homo sapiens zinc finger protein 253 (ZNF253), mRNA.	246				Missing (in Ref. 1; AAC26844).	negative regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			endometrium(1)|kidney(1)|large_intestine(6)|lung(11)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	22						CCTTACTACACATAAGAAAAT	0.398000													9	83					0	0	1	0	0
GTF3C1	2975	broad.mit.edu	37	16	27481507	27481507	+	Missense_Mutation	SNP	A	A	G			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr16:27481507A>G	uc002dov.2	-	30	4776	c.4736T>C	c.(4735-4737)cTc>cCc	p.L1579P	GTF3C1_uc002dou.3_Missense_Mutation_p.L1579P	NM_001520	NP_001511	Q12789	TF3C1_HUMAN	Homo sapiens general transcription factor IIIC, polypeptide 1, alpha 220kDa (GTF3C1), mRNA.	1579						transcription factor TFIIIC complex	DNA binding|protein binding			breast(2)|central_nervous_system(4)|endometrium(10)|haematopoietic_and_lymphoid_tissue(1)|kidney(6)|large_intestine(14)|liver(3)|lung(28)|ovary(2)|pancreas(1)|prostate(2)|skin(5)|upper_aerodigestive_tract(2)	80						CACAGAAATGAGGCCCAGAGA	0.542000													5	219					0	0	1	0	0
ZFP37	7539	broad.mit.edu	37	9	115805634	115805634	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr9:115805634C>T	uc011lwz.1	-	3	1337	c.1309G>A	c.(1309-1311)Gaa>Aaa	p.E437K	ZFP37_uc004bgm.1_Missense_Mutation_p.E422K|ZFP37_uc011lxa.1_Missense_Mutation_p.E423K	NM_003408	NP_003399	Q9Y6Q3	ZFP37_HUMAN	Homo sapiens zinc finger protein 37 homolog (mouse) (ZFP37), mRNA.	422						nucleus	DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			NS(1)|breast(3)|cervix(1)|endometrium(1)|kidney(3)|large_intestine(6)|lung(14)|ovary(1)|prostate(1)|skin(1)|upper_aerodigestive_tract(3)|urinary_tract(3)	38						CTCACATGTTCGGTAAGAGAT	0.378000													18	79					0	0	1	0	0
NLRP4	147945	broad.mit.edu	37	19	56379186	56379186	+	Silent	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr19:56379186C>T	uc002qmd.4	+	5	2720	c.2298C>T	c.(2296-2298)ggC>ggT	p.G766G	NLRP4_uc002qmf.3_Silent_p.G691G|NLRP4_uc010etf.3_Intron	NM_134444	NP_604393	Q96MN2	NALP4_HUMAN	Homo sapiens NLR family, pyrin domain containing 4 (NLRP4), mRNA.	766							ATP binding	p.G766G(2)		breast(1)|haematopoietic_and_lymphoid_tissue(2)|kidney(1)|large_intestine(14)|lung(3)|ovary(6)|pancreas(1)|skin(5)|stomach(1)|upper_aerodigestive_tract(8)	42		Colorectal(82;0.0002)|Ovarian(87;0.221)		GBM - Glioblastoma multiforme(193;0.0606)		TAGACACAGGCGTGCCCCTTT	0.542000													5	102					0	0	1	0	0
AQR	9716	broad.mit.edu	37	15	35210531	35210531	+	Missense_Mutation	SNP	T	T	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr15:35210531T>C	uc001ziv.3	-	14	1451	c.1270A>G	c.(1270-1272)Atg>Gtg	p.M424V		NM_014691	NP_055506	O60306	AQR_HUMAN	Homo sapiens aquarius homolog (mouse) (AQR), mRNA.	424						catalytic step 2 spliceosome	RNA binding			breast(1)|cervix(1)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(7)|large_intestine(10)|lung(18)|ovary(1)|prostate(6)|skin(4)|upper_aerodigestive_tract(2)	57		Lung NSC(122;8.7e-10)|all_lung(180;1.47e-08)		all cancers(64;4.34e-18)|GBM - Glioblastoma multiforme(113;4.59e-07)|BRCA - Breast invasive adenocarcinoma(123;0.0283)		TACAAAGGCATCTGGTTCAAC	0.368000													11	49					0	0	1	0	0
ANKRD20A9P	284232	broad.mit.edu	37	13	19414267	19414267	+	RNA	SNP	T	T	C	rs74350188		TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr13:19414267T>C	uc010tcj.1	-	0		c.31843A>G								Homo sapiens ankyrin repeat domain 20 family, member A9, pseudogene (ANKRD20A9P), non-coding RNA.																		TAACATTTGTTTTTTCTTCAT	0.279000													3	36					0	0	1	0	0
ARAP1	116985	broad.mit.edu	37	11	72403811	72403811	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr11:72403811C>T	uc001osu.3	-	29	4163	c.3974G>A	c.(3973-3975)gGg>gAg	p.G1325E	ARAP1_uc001osv.3_Intron|ARAP1_uc001osr.3_Missense_Mutation_p.G1085E|ARAP1_uc001oss.3_Missense_Mutation_p.G1080E|ARAP1_uc009yth.3_Intron|ARAP1_uc010rre.2_Intron|BC150585_uc009yti.1_Non-coding_Transcript	NM_001040118	NP_056057	Q96P48	ARAP1_HUMAN	Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 (ARAP1), transcript variant 3, mRNA.	1325	PH 4.				actin filament reorganization involved in cell cycle|negative regulation of stress fiber assembly|positive regulation of Cdc42 GTPase activity|positive regulation of filopodium assembly|regulation of ARF GTPase activity|regulation of cell shape|regulation of cellular component movement|small GTPase mediated signal transduction	Golgi cisterna membrane|cytosol|plasma membrane	ARF GTPase activator activity|Rho GTPase activator activity|phosphatidylinositol-3,4,5-trisphosphate binding|protein binding|zinc ion binding			cervix(2)|endometrium(2)|large_intestine(10)|lung(8)|ovary(1)|skin(3)|urinary_tract(1)	27						CTCAGGGGCCCCGCTCCACGG	0.612000													18	44					0	0	1	0	0
LMOD2	442721	broad.mit.edu	37	7	123302927	123302927	+	Silent	SNP	T	T	G	rs13221203		TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr7:123302927T>G	uc003vky.2	+	1	1444	c.1287T>G	c.(1285-1287)ccT>ccG	p.P429P		NM_207163	NP_997046	Q6P5Q4	LMOD2_HUMAN	Homo sapiens leiomodin 2 (cardiac) (LMOD2), mRNA.	429	Pro-rich.					cytoskeleton	actin binding|tropomyosin binding										ctcctcctcctcctccccctc	0.582000													3	16					0	0	1	0	0
RBBP6	5930	broad.mit.edu	37	16	24567694	24567694	+	Missense_Mutation	SNP	G	G	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr16:24567694G>C	uc002dmh.3	+	6	1640	c.600G>C	c.(598-600)atG>atC	p.M200I	RBBP6_uc010vcb.1_Missense_Mutation_p.M67I|RBBP6_uc002dmi.3_Missense_Mutation_p.M200I|RBBP6_uc010bxr.3_Missense_Mutation_p.M200I|RBBP6_uc002dmk.3_Missense_Mutation_p.M67I	NM_006910	NP_008841	Q7Z6E9	RBBP6_HUMAN	Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 1, mRNA.	200					protein ubiquitination involved in ubiquitin-dependent protein catabolic process	chromosome|nucleolus|ubiquitin ligase complex	nucleic acid binding|protein binding|ubiquitin-protein ligase activity|zinc ion binding			NS(1)|breast(3)|central_nervous_system(1)|endometrium(5)|kidney(1)|large_intestine(10)|lung(17)|ovary(4)|pancreas(1)|prostate(2)|urinary_tract(1)	46				GBM - Glioblastoma multiforme(48;0.0518)		GTTTCATGATGGAAGTGAAAG	0.378000													14	66					0	0	1	0	0
METRN	79006	broad.mit.edu	37	16	767073	767073	+	Missense_Mutation	SNP	A	A	G			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr16:767073A>G	uc002cjd.3	+	3	685	c.568A>G	c.(568-570)Att>Gtt	p.I190V	AL360260_uc010bra.2_5'Flank	NM_024042	NP_076947	Q9UJH8	METRN_HUMAN	Homo sapiens meteorin, glial cell differentiation regulator (METRN), mRNA.	190										skin(1)	1		Hepatocellular(780;0.00335)				CCCCACAGTAATTCACGGGAT	0.642000													19	31					0	0	1	0	0
HELZ	9931	broad.mit.edu	37	17	65174992	65174992	+	Missense_Mutation	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr17:65174992G>A	uc010wqk.2	-	12	1400	c.1213C>T	c.(1213-1215)Cgt>Tgt	p.R405C	HELZ_uc002jfv.4_Non-coding_Transcript|HELZ_uc002jfx.4_Missense_Mutation_p.R405C	NM_014877	NP_055692			Homo sapiens helicase with zinc finger (HELZ), mRNA.											NS(1)|breast(5)|endometrium(9)|kidney(3)|large_intestine(11)|liver(1)|lung(24)|ovary(1)|pancreas(1)|prostate(1)|skin(8)|upper_aerodigestive_tract(2)|urinary_tract(2)	69	all_cancers(12;1.24e-11)|Breast(2;1.05e-17)|all_epithelial(3;3.87e-13)					GAATCCCAACGTTTAGCTGTG	0.348000													13	92					0	0	1	0	0
NRXN3	9369	broad.mit.edu	37	14	79434627	79434627	+	Missense_Mutation	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr14:79434627G>A	uc001xun.3	+	10	2452	c.1961G>A	c.(1960-1962)cGc>cAc	p.R654H	NRXN3_uc001xum.1_Non-coding_Transcript|NRXN3_uc010asv.1_Missense_Mutation_p.R779H	NM_004796	NP_004787	Q9HDB5	NRX3B_HUMAN	Homo sapiens neurexin 3 (NRXN3), transcript variant 1, mRNA.	260					angiogenesis|cell adhesion	integral to membrane		p.R654R(1)		NS(1)|breast(4)|central_nervous_system(1)|endometrium(6)|kidney(2)|large_intestine(23)|lung(40)|ovary(3)|pancreas(2)|prostate(5)|skin(7)|upper_aerodigestive_tract(9)|urinary_tract(1)	104		Renal(4;0.00876)		BRCA - Breast invasive adenocarcinoma(234;0.00544)|Kidney(3;0.029)|KIRC - Kidney renal clear cell carcinoma(182;0.223)		TTGAATGGACGCCTGCCAGAC	0.522000													20	65					0	0	1	0	0
SDCBP	6386	broad.mit.edu	37	8	59490716	59490716	+	Missense_Mutation	SNP	A	A	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr8:59490716A>T	uc003xtn.3	+	5	677	c.527A>T	c.(526-528)aAg>aTg	p.K176M	SDCBP_uc003xto.3_Missense_Mutation_p.K175M|SDCBP_uc003xtr.3_Missense_Mutation_p.K175M|SDCBP_uc003xtq.3_Missense_Mutation_p.K176M|SDCBP_uc003xtp.3_Missense_Mutation_p.K170M|SDCBP_uc003xts.3_Missense_Mutation_p.K182M|SDCBP_uc011led.2_Missense_Mutation_p.K117M	NM_005625	NP_005616	O00560	SDCB1_HUMAN	Homo sapiens syndecan binding protein (syntenin) (SDCBP), transcript variant 1, mRNA.	176	PDZ 1.				actin cytoskeleton organization|axon guidance|positive regulation of phosphorylation|protein targeting to membrane|substrate-dependent cell migration, cell extension|synaptic transmission	cytoskeleton|cytosol|endoplasmic reticulum membrane|focal adhesion|interleukin-5 receptor complex|melanosome|nucleus	cytoskeletal adaptor activity|frizzled binding|interleukin-5 receptor binding|protein N-terminus binding|protein heterodimerization activity|syndecan binding			breast(1)|cervix(2)|kidney(1)|large_intestine(1)|lung(1)|skin(1)|urinary_tract(1)	8		all_lung(136;0.0271)|Lung NSC(129;0.0351)|all_epithelial(80;0.0554)				AAAGCGCACAAGGTGCTCAAA	0.428000													19	64					0	0	1	0	0
SDHAP2	727956	broad.mit.edu	37	3	195410627	195410627	+	Missense_Mutation	SNP	A	A	G	rs6583272	by1000genomes	TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr3:195410627A>G	uc003fuw.3	+	12	1718	c.524A>G	c.(523-525)cAg>cGg	p.Q175R	SDHAP2_uc003fuv.3_Non-coding_Transcript					Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2 (SDHAP2), non-coding RNA.																		CCTCAGGTGCAGATTGATGAG	0.473000													5	16					0	0	1	0	0
ZNF718	255403	broad.mit.edu	37	4	59355	59355	+	Missense_Mutation	SNP	A	A	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr4:59355A>T	uc003fzv.1	+	1	192	c.36A>T	c.(34-36)gaA>gaT	p.E12D	ZNF718_uc003fzt.4_Missense_Mutation_p.E12D|ZNF718_uc003fzu.1_Non-coding_Transcript|ZNF718_uc010iay.1_Non-coding_Transcript|ZNF718_uc011bus.1_5'UTR|ZNF718_uc011but.1_Intron	NM_182524	NP_872330	Q3SXZ3	ZN718_HUMAN	Homo sapiens zinc finger protein 595 (ZNF595), mRNA.	12	KRAB.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding						all_cancers(4;0.0738)|all_epithelial(65;0.139)		Lung(54;0.0681)|Epithelial(2;0.0838)|all cancers(2;0.135)|LUSC - Lung squamous cell carcinoma(95;0.18)		TGGCCATAGAATTCTCCCCTG	0.428000													13	516					0	0	1	0	0
FAM129B	64855	broad.mit.edu	37	9	130286023	130286023	+	Missense_Mutation	SNP	A	A	G			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr9:130286023A>G	uc004brh.3	-	4	726	c.524T>C	c.(523-525)aTg>aCg	p.M175T	FAM129B_uc004bri.3_Missense_Mutation_p.M162T|FAM129B_uc004brj.4_Missense_Mutation_p.M175T	NM_022833	NP_073744	Q96TA1	NIBL1_HUMAN	Homo sapiens family with sequence similarity 129, member B (FAM129B), transcript variant 1, mRNA.	175	PH.						protein binding			breast(2)|endometrium(4)|kidney(1)|large_intestine(5)|liver(1)|lung(7)|skin(1)|stomach(2)|upper_aerodigestive_tract(2)	25						GGCTTCTGTCATCATGCAGAA	0.607000											OREG0019507	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	26	80					0	0	1	0	0
GRM8	2918	broad.mit.edu	37	7	126173392	126173392	+	Missense_Mutation	SNP	T	T	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr7:126173392T>C	uc003vlr.2	-	7	2355	c.2044A>G	c.(2044-2046)Aaa>Gaa	p.K682E	GRM8_uc003vls.2_Non-coding_Transcript|GRM8_uc011kof.1_Non-coding_Transcript|GRM8_uc003vlt.2_Missense_Mutation_p.K682E|GRM8_uc010lkz.1_Non-coding_Transcript	NM_000845	NP_000836	O00222	GRM8_HUMAN	Homo sapiens glutamate receptor, metabotropic 8 (GRM8), transcript variant 1, mRNA.	682					negative regulation of cAMP biosynthetic process|sensory perception of smell|visual perception	integral to plasma membrane		p.K681K(1)		breast(3)|cervix(1)|endometrium(7)|haematopoietic_and_lymphoid_tissue(4)|large_intestine(16)|lung(62)|ovary(5)|pancreas(1)|prostate(1)|skin(14)|stomach(1)|upper_aerodigestive_tract(6)|urinary_tract(4)	125		Prostate(267;0.186)			L-Glutamic Acid(DB00142)	GTGACAGATTTCTTCCCCTGC	0.507000										HNSCC(24;0.065)			7	91					0	0	1	0	0
KRTAP5-10	387273	broad.mit.edu	37	11	71276861	71276861	+	Silent	SNP	T	T	C	rs36179995		TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr11:71276861T>C	uc001oqt.1	+	0	253	c.228T>C	c.(226-228)tcT>tcC	p.S76S		NM_001012710	NP_001012728	Q6L8G5	KR510_HUMAN	Homo sapiens keratin associated protein 5-10 (KRTAP5-10), mRNA.	76	7 X 4 AA repeats of C-C-X-P.					keratin filament				endometrium(2)|large_intestine(1)|lung(4)|prostate(2)|skin(2)|upper_aerodigestive_tract(1)	12						ACTGTGGCTCTTGTGGGGGCT	0.677000													7	285					0	0	1	0	0
TP53	7157	broad.mit.edu	37	17	7577536	7577536	+	Missense_Mutation	SNP	T	T	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr17:7577536T>C	uc002gim.2	-	6	939	c.745A>G	c.(745-747)Agg>Ggg	p.R249G	TP53_uc002gig.1_Missense_Mutation_p.R249G|TP53_uc002gih.3_Missense_Mutation_p.R249G|TP53_uc010cne.1_5'Flank|TP53_uc010cng.1_Missense_Mutation_p.R117G|TP53_uc010cnf.1_Missense_Mutation_p.R117G|TP53_uc002gii.1_Missense_Mutation_p.R117G|TP53_uc010cni.1_Missense_Mutation_p.R249G|TP53_uc010cnh.1_Missense_Mutation_p.R249G|TP53_uc002gij.2_Missense_Mutation_p.R249G|TP53_uc010cnj.1_Non-coding_Transcript|TP53_uc002gin.2_Missense_Mutation_p.R156G|TP53_uc002gio.2_Missense_Mutation_p.R117G|DL476309_uc021tpg.1_5'Flank|DL476358_uc021tph.1_5'Flank	NM_001126112	NP_001119587	P04637	P53_HUMAN	Homo sapiens tumor protein p53 (TP53), transcript variant 2, mRNA.	249	Interaction with AXIN1 (By similarity).|Interaction with HIPK1 (By similarity).		R -> G (in sporadic cancers; somatic mutation).|R -> I (in a sporadic cancer; somatic mutation).|R -> K (in sporadic cancers; somatic mutation).|R -> M (in sporadic cancers; somatic mutation).|R -> N (in a sporadic cancer; somatic mutation; requires 2 nucleotide substitutions).|R -> S (in sporadic cancers; somatic mutation; dbSNP:rs28934571).|R -> T (in sporadic cancers; somatic mutation).|R -> W (in sporadic cancers; somatic mutation).|RP -> SA (in a sporadic cancer; somatic mutation).|RP -> SS (in sporadic cancers; somatic mutation).		DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest|DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis|DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator|ER overload response|Ras protein signal transduction|activation of caspase activity by cytochrome c|base-excision repair|blood coagulation|cell cycle arrest|cell differentiation|cell proliferation|cellular protein localization|cellular response to UV|cellular response to drug|cellular response to glucose starvation|cellular response to hypoxia|cellular response to ionizing radiation|determination of adult lifespan|interspecies interaction between organisms|negative regulation of apoptosis|negative regulation of cell growth|negative regulation of cell proliferation|negative regulation of helicase activity|negative regulation of transcription from RNA polymerase II promoter|nucleotide-excision repair|oxidative stress-induced premature senescence|positive regulation of histone deacetylation|positive regulation of neuron apoptosis|positive regulation of peptidyl-tyrosine phosphorylation|positive regulation of reactive oxygen species metabolic process|positive regulation of thymocyte apoptosis|positive regulation of transcription from RNA polymerase II promoter|protein localization|protein tetramerization|regulation of mitochondrial membrane permeability|replicative senescence|response to X-ray|response to antibiotic|response to gamma radiation	PML body|cytoplasm|cytosol|endoplasmic reticulum|insoluble fraction|mitochondrion|nuclear chromatin|nuclear matrix|nucleolus|nucleus|protein complex|replication fork	ATP binding|DNA strand annealing activity|RNA polymerase II transcription factor binding|chaperone binding|chromatin binding|copper ion binding|damaged DNA binding|histone acetyltransferase binding|p53 binding|protease binding|protein N-terminus binding|protein binding|protein heterodimerization activity|protein kinase binding|protein phosphatase 2A binding|sequence-specific DNA binding transcription factor activity|transcription regulatory region DNA binding|transcription repressor activity|ubiquitin protein ligase binding|zinc ion binding	p.R248Q(565)|p.R248W(513)|p.R249S(326)|p.R248L(70)|p.R249W(68)|p.R249G(58)|p.R249M(31)|p.R249T(16)|p.R248P(16)|p.R249K(16)|p.R248G(12)|p.R248R(10)|p.0?(8)|p.R249R(7)|p.R249fs*96(7)|p.?(5)|p.M246_P250delMNRRP(4)|p.R249fs*14(3)|p.N247_R248delNR(3)|p.N247_P250delNRRP(2)|p.R249fs*15(2)|p.R249_I251delRPI(2)|p.N247_R248>KW(2)|p.R249_P250delRP(2)|p.R248_P250delRRP(2)|p.N247_R249delNRR(2)|p.R248fs*97(2)|p.R249_T256delRPILTIIT(2)|p.R249fs*19(2)|p.R249_P250insR(1)|p.R248Y(1)|p.R248C(1)|p.N247_R248>IP(1)|p.R249_P250>SS(1)|p.R248fs*16(1)|p.G245fs*14(1)		NS(16)|adrenal_gland(37)|autonomic_ganglia(16)|biliary_tract(273)|bone(108)|breast(2530)|central_nervous_system(1264)|cervix(68)|endometrium(223)|eye(24)|fallopian_tube(1)|gastrointestinal_tract_(site_indeterminate)(1)|genital_tract(16)|haematopoietic_and_lymphoid_tissue(1301)|kidney(96)|large_intestine(5124)|liver(897)|lung(2388)|meninges(5)|oesophagus(1473)|ovary(1659)|pancreas(452)|penis(10)|peritoneum(33)|pituitary(4)|placenta(1)|pleura(3)|prostate(235)|salivary_gland(43)|skin(791)|small_intestine(14)|soft_tissue(220)|stomach(1158)|testis(11)|thymus(21)|thyroid(54)|upper_aerodigestive_tract(2271)|urinary_tract(1259)|vagina(6)|vulva(79)	24185		all_cancers(10;1.01e-06)|Myeloproliferative disorder(207;0.0122)|Prostate(122;0.081)		GBM - Glioblastoma multiforme(2;1.59e-06)|READ - Rectum adenocarcinoma(115;0.174)		AGGATGGGCCTCCGGTTCATG	0.567000		111	"""Mis, N, F"""		"""breast, colorectal, lung, sarcoma, adrenocortical, glioma, multiple other tumour types"""	"""breast, sarcoma, adrenocortical carcinoma, glioma, multiple other tumour types"""		Other conserved DNA damage response genes	Osteosarcoma, Familial Clustering of;Li-Fraumeni syndrome;Hereditary Breast-Ovarian Cancer, non-BRCA1/2;Hereditary Adrenocortical Cancer;Endometrial Cancer, Familial Clustering of	HNSCC(1;<9.43e-08)|TCGA GBM(1;<1E-08)|TSP Lung(2;<1E-08)|TCGA Ovarian(1;<1.89e-07)|Multiple Myeloma(5;0.019)			16	54					0	0	1	0	0
HK3	3101	broad.mit.edu	37	5	176308519	176308519	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr5:176308519C>T	uc003mfa.3	-	17	2503	c.2411G>A	c.(2410-2412)cGg>cAg	p.R804Q	HK3_uc003mez.3_Missense_Mutation_p.R360Q	NM_002115	NP_002106	P52790	HXK3_HUMAN	Homo sapiens hexokinase 3 (white cell) (HK3), nuclear gene encoding mitochondrial protein, mRNA.	804	Catalytic.				glucose transport|glycolysis|transmembrane transport	cytosol|membrane	ATP binding|glucokinase activity			breast(2)|central_nervous_system(2)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(7)|lung(21)|ovary(3)|prostate(2)|skin(3)|upper_aerodigestive_tract(1)|urinary_tract(2)	47	all_cancers(89;0.000104)|Renal(175;0.000269)|Lung NSC(126;0.00696)|all_lung(126;0.0115)	Medulloblastoma(196;0.00498)|all_neural(177;0.0138)	Kidney(164;2.23e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000178)			TCGGACCTGCCGCAGGGCCAG	0.637000													5	37					0	0	1	0	0
PRDM8	56978	broad.mit.edu	37	4	81123567	81123567	+	Silent	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr4:81123567G>A	uc010ijo.3	+	7	1790	c.951G>A	c.(949-951)ccG>ccA	p.P317P	PRDM8_uc003hmb.4_Silent_p.P317P|PRDM8_uc003hmc.4_Silent_p.P317P	NM_020226	NP_064611	Q9NQV8	PRDM8_HUMAN	Homo sapiens PR domain containing 8 (PRDM8), transcript variant 1, mRNA.	317	Gly-rich.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(2)|central_nervous_system(1)|endometrium(1)|large_intestine(2)|lung(2)|skin(2)	10						GGAAATTCCCGGAGGAGGCGG	0.741000													3	11					0	0	1	0	0
ATP2A1	487	broad.mit.edu	37	16	28900188	28900188	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr16:28900188C>T	uc002dro.1	+	8	1193	c.1009C>T	c.(1009-1011)Ccc>Tcc	p.P337S	NPIPL1_uc010vct.2_Intron|ATP2A1_uc002drn.1_Missense_Mutation_p.P337S|ATP2A1_uc002drp.1_Missense_Mutation_p.P212S|ATP2A1_uc010bym.1_Non-coding_Transcript	NM_173201	NP_775293	O14983	AT2A1_HUMAN	Homo sapiens ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (ATP2A1), transcript variant b, mRNA.	337					ATP biosynthetic process|apoptosis in response to endoplasmic reticulum stress|apoptotic mitochondrial changes|calcium ion import|elevation of endoplasmic reticulum calcium ion concentration|elevation of mitochondrial calcium ion concentration|maintenance of mitochondrion location|negative regulation of striated muscle contraction|platelet activation|positive regulation of fast-twitch skeletal muscle fiber contraction|reduction of endoplasmic reticulum calcium ion concentration|relaxation of skeletal muscle|response to endoplasmic reticulum stress	ER-Golgi intermediate compartment|H zone|I band|endoplasmic reticulum membrane|microsome|perinuclear region of cytoplasm|platelet dense tubular network membrane|sarcoplasmic reticulum|sarcoplasmic reticulum membrane	ATP binding|calcium ion binding|calcium-transporting ATPase activity|protein homodimerization activity			breast(1)|central_nervous_system(1)|endometrium(4)|kidney(3)|large_intestine(7)|lung(10)|ovary(4)|pancreas(1)|prostate(2)|skin(3)|urinary_tract(2)	38						AAGAAGCTTGCCCTCCGTAGA	0.587000													5	302					0	0	1	0	0
ZNF827	152485	broad.mit.edu	37	4	146823320	146823320	+	Nonsense_Mutation	SNP	G	G	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr4:146823320G>C	uc003ikn.3	-	1	1139	c.1091C>G	c.(1090-1092)tCa>tGa	p.S364*	ZNF827_uc003ikm.3_Nonsense_Mutation_p.S364*|ZNF827_uc010iox.3_Intron	NM_178835	NP_849157	Q17R98	ZN827_HUMAN	Homo sapiens zinc finger protein 827 (ZNF827), mRNA.	364					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			NS(1)|breast(2)|cervix(1)|endometrium(3)|kidney(2)|large_intestine(13)|lung(18)|prostate(4)|skin(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	48	all_hematologic(180;0.151)					TGCCATACCTGAATTGGAGGG	0.448000													5	39					0	0	1	0	0
FLJ36000	284124	broad.mit.edu	37	17	21904100	21904100	+	RNA	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr17:21904100C>T	uc002gza.2	+	0		c.39C>T								Homo sapiens uncharacterized FLJ36000 (FLJ36000), non-coding RNA.																		tccacaggaacgtctccggct	0.697000													4	56					0	0	1	0	0
ADCY10	55811	broad.mit.edu	37	1	167823646	167823646	+	Silent	SNP	A	A	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr1:167823646A>C	uc001ger.3	-	17	2551	c.2253T>G	c.(2251-2253)gtT>gtG	p.V751V	ADCY10_uc010plj.2_Silent_p.V598V|ADCY10_uc009wvk.3_Silent_p.V659V|ADCY10_uc009wvl.3_Silent_p.V750V	NM_018417	NP_001161221	Q96PN6	ADCYA_HUMAN	Homo sapiens adenylate cyclase 10 (soluble) (ADCY10), transcript variant 1, mRNA.	751					intracellular signal transduction|spermatogenesis	cytoskeleton|cytosol|perinuclear region of cytoplasm|plasma membrane|soluble fraction	ATP binding|adenylate cyclase activity|magnesium ion binding			autonomic_ganglia(1)|breast(1)|central_nervous_system(3)|cervix(3)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(11)|lung(26)|ovary(2)|prostate(4)|skin(6)|stomach(1)|urinary_tract(1)	63						TTTGTTGGAAAACGAGTACCT	0.443000													22	96					0	0	1	0	0
LOC441666	441666	broad.mit.edu	37	10	42832120	42832120	+	RNA	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr10:42832120G>A	uc010qey.2	-	2		c.1855C>T								Homo sapiens zinc finger protein 91 pseudogene (LOC441666), non-coding RNA.																		AACAGTAAAAGGCTTTGCCAC	0.348000													3	12					0	0	1	0	0
ZC3H18	124245	broad.mit.edu	37	16	88688651	88688651	+	Nonsense_Mutation	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr16:88688651C>T	uc010voz.2	+	9	1794	c.1594C>T	c.(1594-1596)Cag>Tag	p.Q532*	ZC3H18_uc002fky.3_Nonsense_Mutation_p.Q508*|ZC3H18_uc010chw.3_Non-coding_Transcript	NM_144604	NP_653205	Q86VM9	ZCH18_HUMAN	Homo sapiens zinc finger CCCH-type containing 18 (ZC3H18), mRNA.	508	Ser-rich.					nucleus	nucleic acid binding|zinc ion binding			endometrium(5)|haematopoietic_and_lymphoid_tissue(2)|kidney(6)|large_intestine(9)|lung(16)|ovary(1)|skin(2)|upper_aerodigestive_tract(1)	42				BRCA - Breast invasive adenocarcinoma(80;0.0542)		CACGGGGCCGCAGGTGAAGAG	0.602000													5	28					0	0	1	0	0
FBXL6	26233	broad.mit.edu	37	8	145579796	145579796	+	Missense_Mutation	SNP	G	G	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr8:145579796G>T	uc003zcb.3	-	7	1380	c.1304C>A	c.(1303-1305)aCc>aAc	p.T435N	C8ORFK29_uc011llb.2_5'Flank|C8ORFK29_uc010mfw.3_5'Flank|C8ORFK29_uc003zby.4_5'Flank|FBXL6_uc003zbz.3_Missense_Mutation_p.T162N|FBXL6_uc003zca.3_Missense_Mutation_p.T429N|FBXL6_uc010mfx.3_Missense_Mutation_p.T196N|SLC52A2_uc003zcc.2_5'Flank|SLC52A2_uc003zce.2_5'Flank|SLC52A2_uc010mfy.2_5'Flank|SLC52A2_uc011llc.2_5'Flank|SLC52A2_uc003zcd.2_5'Flank	NM_012162	NP_036294	Q8N531	FBXL6_HUMAN	Homo sapiens F-box and leucine-rich repeat protein 6 (FBXL6), transcript variant 1, mRNA.	435					proteolysis		ubiquitin-protein ligase activity			endometrium(1)|lung(3)|ovary(1)	5	all_cancers(97;6.64e-12)|all_epithelial(106;2.89e-10)|Lung NSC(106;5.7e-05)|all_lung(105;0.000174)|Ovarian(258;0.0173)|Acute lymphoblastic leukemia(118;0.155)		OV - Ovarian serous cystadenocarcinoma(54;4.43e-40)|Epithelial(56;1.48e-39)|all cancers(56;1.49e-34)|BRCA - Breast invasive adenocarcinoma(115;0.0441)|Colorectal(110;0.055)			CCACTTCTGGGTCAAAAAGGG	0.582000													4	134					0	0	1	0	0
CDH2	1000	broad.mit.edu	37	18	25565628	25565628	+	Silent	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr18:25565628G>A	uc002kwg.2	-	11	2298	c.1839C>T	c.(1837-1839)tgC>tgT	p.C613C	CDH2_uc010xbn.1_Silent_p.C582C	NM_001792	NP_001783	P19022	CADH2_HUMAN	Homo sapiens cadherin 2, type 1, N-cadherin (neuronal) (CDH2), mRNA.	613	Cadherin 5.				adherens junction organization|cell junction assembly|positive regulation of muscle cell differentiation	catenin complex|integral to membrane	alpha-catenin binding|beta-catenin binding|calcium ion binding|gamma-catenin binding			NS(1)|breast(5)|cervix(2)|endometrium(7)|kidney(3)|large_intestine(22)|lung(32)|ovary(4)|prostate(1)|skin(1)|stomach(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	82						CTGGAGTTTCGCAAGTCTCTG	0.408000													4	62					0	0	1	0	0
WDR17	116966	broad.mit.edu	37	4	177071069	177071069	+	Missense_Mutation	SNP	T	T	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr4:177071069T>C	uc003iuj.3	+	14	2384	c.2081T>C	c.(2080-2082)cTg>cCg	p.L694P	WDR17_uc003ium.4_Missense_Mutation_p.L670P|WDR17_uc003iul.2_Intron|WDR17_uc003iun.3_5'Flank	NM_170710	NP_733828	Q8IZU2	WDR17_HUMAN	Homo sapiens WD repeat domain 17 (WDR17), transcript variant 1, mRNA.	694										breast(2)|central_nervous_system(1)|cervix(1)|endometrium(3)|kidney(2)|large_intestine(18)|lung(46)|ovary(2)|pancreas(1)|prostate(3)|skin(5)|stomach(1)|upper_aerodigestive_tract(6)|urinary_tract(1)	92		Breast(14;0.00015)|Melanoma(52;0.00886)|Prostate(90;0.00996)|Renal(120;0.0183)|all_hematologic(60;0.107)|all_neural(102;0.164)		all cancers(43;2.21e-20)|Epithelial(43;9.71e-18)|OV - Ovarian serous cystadenocarcinoma(60;2.38e-09)|GBM - Glioblastoma multiforme(59;0.000295)|STAD - Stomach adenocarcinoma(60;0.000703)|LUSC - Lung squamous cell carcinoma(193;0.0232)		ATAAATATTCTGGCAGACAGA	0.393000													4	155					0	0	1	0	0
LPHN3	23284	broad.mit.edu	37	4	62758468	62758468	+	Silent	SNP	G	G	A	rs145773574	by1000genomes	TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr4:62758468G>A	uc010ihh.3	+	6	1544	c.1371G>A	c.(1369-1371)ccG>ccA	p.P457P	LPHN3_uc003hcq.4_Silent_p.P457P|LPHN3_uc003hcs.1_Silent_p.P286P	NM_015236	NP_056051	Q9HAR2	LPHN3_HUMAN	Homo sapiens latrophilin 3 (LPHN3), mRNA.	457					neuropeptide signaling pathway	integral to membrane|plasma membrane	G-protein coupled receptor activity|sugar binding			breast(5)|central_nervous_system(1)|endometrium(7)|haematopoietic_and_lymphoid_tissue(5)|kidney(4)|large_intestine(21)|lung(73)|ovary(1)|pancreas(1)|prostate(6)|upper_aerodigestive_tract(1)	125						GTACCACCCCGTCAGTGTCAG	0.522000													24	131					0	0	1	0	0
WDR85	92715	broad.mit.edu	37	9	140468754	140468754	+	Missense_Mutation	SNP	C	C	G			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr9:140468754C>G	uc004cnk.1	-	4	704	c.546G>C	c.(544-546)agG>agC	p.R182S	WDR85_uc004cnm.1_5'UTR|WDR85_uc022bqk.1_Non-coding_Transcript	NM_138778	NP_620133	Q9BTV6	WDR85_HUMAN	Homo sapiens WD repeat domain 85 (WDR85), mRNA.	182					peptidyl-diphthamide biosynthetic process from peptidyl-histidine					breast(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(1)|lung(4)	8	all_cancers(76;0.106)			OV - Ovarian serous cystadenocarcinoma(145;0.00029)|Epithelial(140;0.000509)		GCAGCCTGGGCCTCGTCTCAT	0.542000													37	150					0	0	1	0	0
EXOSC9	5393	broad.mit.edu	37	4	122723880	122723880	+	Silent	SNP	A	A	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr4:122723880A>C	uc003iea.3	+	2	321	c.213A>C	c.(211-213)gcA>gcC	p.A71A	EXOSC9_uc003idz.3_Silent_p.A71A|EXOSC9_uc003ieb.3_Silent_p.A55A|EXOSC9_uc010inp.1_5'Flank	NM_005033	NP_005024	Q06265	EXOS9_HUMAN	Homo sapiens exosome component 9 (EXOSC9), transcript variant 2, mRNA.	71	ARE binding.				exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay|immune response|nuclear mRNA surveillance|nuclear polyadenylation-dependent rRNA catabolic process|positive regulation of cell growth|rRNA processing	cytosol|nuclear exosome (RNase complex)|nucleolus|nucleus	3'-5'-exoribonuclease activity|AU-rich element binding|protein binding			cervix(1)|endometrium(2)|kidney(2)|large_intestine(6)|lung(4)|urinary_tract(1)	16						TCAATCGGGCAACAGAAGGTA	0.388000													19	78					0	0	1	0	0
CD200R1L	344807	broad.mit.edu	37	3	112538718	112538718	+	Missense_Mutation	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr3:112538718G>A	uc003dzi.1	-	4	930	c.704C>T	c.(703-705)gCg>gTg	p.A235V	CD200R1L_uc010hqf.1_Missense_Mutation_p.A214V|CD200R1L_uc011bhw.1_Missense_Mutation_p.A214V	NM_001008784	NP_001186144	Q6Q8B3	MO2R2_HUMAN	Homo sapiens CD200 receptor 1-like (CD200R1L), transcript variant 1, mRNA.	235						integral to membrane	receptor activity			breast(2)|central_nervous_system(1)|endometrium(1)|large_intestine(4)|lung(6)|ovary(1)|prostate(2)|urinary_tract(2)	19						TAAGGACAACGCTGGAGATCC	0.373000													15	50					0	0	1	0	0
PCDHAC2	56134	broad.mit.edu	37	5	140209377	140209377	+	Silent	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr5:140209377G>A	uc003lho.2	+	0	1728	c.1701G>A	c.(1699-1701)gcG>gcA	p.A567A	PCDHAC2_uc003lha.2_Intron|PCDHAC2_uc003lhb.2_Intron|PCDHAC2_uc003lhd.2_Intron|PCDHAC2_uc003lhf.2_Intron|PCDHAC2_uc003lhh.1_Intron|PCDHAC2_uc003lhi.2_Intron|PCDHAC2_uc003lhl.2_Intron|PCDHAC2_uc003lhk.1_Intron|PCDHAC2_uc003lhn.2_Intron|PCDHAC2_uc011dab.2_Silent_p.A567A	NM_018909	NP_061732	Q9Y5I4	PCDC2_HUMAN	Homo sapiens protocadherin alpha 6 (PCDHA6), transcript variant 1, mRNA.	581	Cadherin 5.				homophilic cell adhesion|nervous system development	integral to plasma membrane	calcium ion binding			NS(1)|breast(1)|endometrium(4)|kidney(4)|large_intestine(10)|liver(2)|lung(9)|ovary(2)|prostate(1)|skin(7)|upper_aerodigestive_tract(3)|urinary_tract(1)	45			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			CGCTGCTGGCGCCTCGGGTGG	0.701000													38	186					0	0	1	0	0
PSG3	5671	broad.mit.edu	37	19	43233351	43233351	+	Silent	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr19:43233351G>A	uc002oue.3	-	4	1299	c.1167C>T	c.(1165-1167)agC>agT	p.S389S	PSG3_uc002ouf.3_Non-coding_Transcript|PSG3_uc002oug.1_Silent_p.S389S	NM_021016	NP_066296	Q16557	PSG3_HUMAN	Homo sapiens pregnancy specific beta-1-glycoprotein 3 (PSG3), mRNA.	389	Ig-like C2-type 3.				defense response|female pregnancy	extracellular region		p.H388Y(1)		central_nervous_system(1)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(5)|lung(12)|ovary(1)|pancreas(1)|prostate(2)|skin(3)|stomach(1)|urinary_tract(1)	36		Prostate(69;0.00682)				CATAGAGCCCGCTATGCTTTG	0.468000													5	378					0	0	1	0	0
CD1E	913	broad.mit.edu	37	1	158325304	158325304	+	Silent	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr1:158325304C>T	uc001fse.3	+	2	863	c.570C>T	c.(568-570)tgC>tgT	p.C190C	CD1E_uc010pid.2_Silent_p.C188C|CD1E_uc010pie.2_Silent_p.C91C|CD1E_uc001fsh.3_Intron|CD1E_uc001fry.3_Silent_p.C190C|CD1E_uc001fsf.3_Silent_p.C190C|CD1E_uc001fsg.3_Intron|CD1E_uc009wsv.3_Silent_p.C91C|CD1E_uc001fsj.3_Intron|CD1E_uc001fsk.3_Intron|CD1E_uc001fsa.3_Intron|CD1E_uc001fsd.3_Silent_p.C190C|CD1E_uc001frz.3_Intron|CD1E_uc010pig.2_Intron|CD1E_uc001fsc.3_Intron|CD1E_uc021pbm.1_5'Flank|CD1E_uc009wsw.3_5'Flank	NM_030893	NP_112155	P15812	CD1E_HUMAN	Homo sapiens CD1e molecule (CD1E), transcript variant 1, mRNA.	190					antigen processing and presentation|immune response	Golgi membrane|early endosome|integral to plasma membrane|late endosome|lysosomal lumen		p.T189N(1)		breast(2)|endometrium(2)|kidney(1)|large_intestine(6)|lung(27)|pancreas(1)|prostate(4)|skin(4)|stomach(1)|urinary_tract(1)	49	all_hematologic(112;0.0378)					GTCACACCTGCCCTCGATTTC	0.507000													16	41					0	0	1	0	0
PLXNB1	5364	broad.mit.edu	37	3	48465260	48465260	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr3:48465260C>T	uc003csw.2	-	2	1031	c.761G>A	c.(760-762)cGg>cAg	p.R254Q	PLXNB1_uc003csu.2_Missense_Mutation_p.R254Q|PLXNB1_uc003csx.2_Missense_Mutation_p.R254Q|PLXNB1_uc010hjx.1_Non-coding_Transcript	NM_002673	NP_002664	O43157	PLXB1_HUMAN	Homo sapiens plexin B1 (PLXNB1), transcript variant 1, mRNA.	254	Sema.				axon guidance|cell migration|intracellular signal transduction|regulation of cell shape|regulation of cytoskeleton organization|regulation of small GTPase mediated signal transduction|semaphorin-plexin signaling pathway	extracellular region|integral to plasma membrane|intracellular|semaphorin receptor complex	GTPase activator activity|semaphorin receptor activity|semaphorin receptor binding			NS(1)|breast(2)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(6)|lung(10)|ovary(3)|pancreas(2)|prostate(3)|skin(4)|stomach(1)|upper_aerodigestive_tract(2)|urinary_tract(3)	47				BRCA - Breast invasive adenocarcinoma(193;0.000292)|KIRC - Kidney renal clear cell carcinoma(197;0.00549)|Kidney(197;0.00619)		GTGCTGGTCCCGGAGACACAC	0.622000													10	92					0	0	1	0	0
ZC3H18	124245	broad.mit.edu	37	16	88688650	88688650	+	Silent	SNP	G	G	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr16:88688650G>C	uc010voz.2	+	9	1793	c.1593G>C	c.(1591-1593)ccG>ccC	p.P531P	ZC3H18_uc002fky.3_Silent_p.P507P|ZC3H18_uc010chw.3_Non-coding_Transcript	NM_144604	NP_653205	Q86VM9	ZCH18_HUMAN	Homo sapiens zinc finger CCCH-type containing 18 (ZC3H18), mRNA.	507						nucleus	nucleic acid binding|zinc ion binding			endometrium(5)|haematopoietic_and_lymphoid_tissue(2)|kidney(6)|large_intestine(9)|lung(16)|ovary(1)|skin(2)|upper_aerodigestive_tract(1)	42				BRCA - Breast invasive adenocarcinoma(80;0.0542)		CCACGGGGCCGCAGGTGAAGA	0.602000													5	28					0	0	1	0	0
LOC441666	441666	broad.mit.edu	37	10	42832134	42832134	+	RNA	SNP	T	T	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr10:42832134T>C	uc010qey.2	-	2		c.1841A>G								Homo sapiens zinc finger protein 91 pseudogene (LOC441666), non-coding RNA.																		TTGCCACATTTTTCACAATTG	0.353000													3	12					0	0	1	0	0
UTRN	7402	broad.mit.edu	37	6	144844318	144844318	+	Missense_Mutation	SNP	G	G	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr6:144844318G>A	uc003qkt.3	+	39	5992	c.5900G>A	c.(5899-5901)cGg>cAg	p.R1967Q		NM_007124	NP_009055	P46939	UTRO_HUMAN	Homo sapiens utrophin (UTRN), mRNA.	1967					muscle contraction|muscle organ development|positive regulation of cell-matrix adhesion	cell junction|cytoplasm|cytoskeleton|membrane fraction|nucleus|postsynaptic membrane	actin binding|calcium ion binding|zinc ion binding	p.R1967L(2)		NS(1)|autonomic_ganglia(1)|breast(7)|central_nervous_system(1)|cervix(2)|endometrium(21)|kidney(10)|large_intestine(29)|lung(56)|ovary(5)|pancreas(1)|prostate(1)|skin(5)|stomach(1)|upper_aerodigestive_tract(5)|urinary_tract(2)	148		Ovarian(120;0.218)		OV - Ovarian serous cystadenocarcinoma(155;5.72e-07)|GBM - Glioblastoma multiforme(68;4.9e-05)|Colorectal(48;0.213)		TACAGTGATCGGAAAGGGTAT	0.378000													11	38					0	0	1	0	0
abParts	0	broad.mit.edu	37	14	106877737	106877737	+	RNA	SNP	T	T	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr14:106877737T>C	uc021ser.1	-	409		c.13188A>G								Parts of antibodies, mostly variable regions.																		CGGGTTGTAGTAGGTGCTCCC	0.567000													23	372					0	0	1	0	0
SPPL2A	84888	broad.mit.edu	37	15	51028899	51028899	+	Missense_Mutation	SNP	T	T	C			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr15:51028899T>C	uc001zyv.3	-	6	952	c.772A>G	c.(772-774)Atg>Gtg	p.M258V		NM_032802	NP_116191	Q8TCT8	PSL2_HUMAN	Homo sapiens signal peptide peptidase-like 2A (SPPL2A), mRNA.	258						integral to membrane	aspartic-type endopeptidase activity			endometrium(1)|kidney(1)|large_intestine(4)|lung(6)|prostate(1)|stomach(1)|upper_aerodigestive_tract(1)	15				all cancers(107;0.000712)|GBM - Glioblastoma multiforme(94;0.00314)		TACAGACTCATTGCTGATGCT	0.318000													4	49					0	0	1	0	0
ZNF528	84436	broad.mit.edu	37	19	52919156	52919156	+	Missense_Mutation	SNP	A	A	G			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr19:52919156A>G	uc002pzh.3	+	6	1477	c.1051A>G	c.(1051-1053)Aaa>Gaa	p.K351E	ZNF528_uc002pzi.3_Missense_Mutation_p.K118E	NM_032423	NP_115799	Q3MIS6	ZN528_HUMAN	Homo sapiens zinc finger protein 528 (ZNF528), mRNA.	351					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(13)|lung(6)|ovary(1)|prostate(3)|skin(5)|stomach(1)|upper_aerodigestive_tract(2)	39				GBM - Glioblastoma multiforme(134;0.00249)|OV - Ovarian serous cystadenocarcinoma(262;0.00817)		TACTGGTGAGAAACCTTACAA	0.388000													16	68					0	0	1	0	0
MRPS18C	51023	broad.mit.edu	37	4	84377254	84377254	+	Silent	SNP	C	C	T	rs141532727	byFrequency	TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr4:84377254C>T	uc003hor.4	+	0	137	c.24C>T	c.(22-24)tgC>tgT	p.C8C	HELQ_uc003hom.3_5'Flank|HELQ_uc010ikb.3_5'Flank|HELQ_uc003hol.4_5'Flank|HELQ_uc010ikc.3_5'Flank|HELQ_uc003hon.1_5'Flank|HELQ_uc003hoo.1_5'Flank|HELQ_uc003hop.1_5'Flank|HELQ_uc003hoq.1_5'Flank	NM_016067	NP_057151	Q9Y3D5	RT18C_HUMAN	Homo sapiens mitochondrial ribosomal protein S18C (MRPS18C), nuclear gene encoding mitochondrial protein, mRNA.	8					translation	mitochondrial small ribosomal subunit	structural constituent of ribosome			endometrium(1)|kidney(1)|large_intestine(2)|lung(1)	5		Hepatocellular(203;0.114)				TTGCTGTTTGCGGTGGTCTAG	0.552000													5	315					0	0	1	0	0
ST8SIA1	6489	broad.mit.edu	37	12	22354692	22354692	+	Nonsense_Mutation	SNP	C	C	A			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr12:22354692C>A	uc001rfo.4	-	4	1347	c.865G>T	c.(865-867)Gag>Tag	p.E289*	ST8SIA1_uc009zix.3_Nonsense_Mutation_p.E146*	NM_003034	NP_003025	Q92185	SIA8A_HUMAN	Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (ST8SIA1), mRNA.	289					glycosphingolipid biosynthetic process|protein glycosylation	integral to Golgi membrane	alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity			breast(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(4)|lung(10)|ovary(3)|skin(1)|upper_aerodigestive_tract(1)	25						ATGGCCACCTCTTCACAGAGA	0.512000													19	80					0	0	1	0	0
SSPO	23145	broad.mit.edu	37	7	149509149	149509149	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr7:149509149C>T	uc010lpk.3	+	67	9686	c.9686C>T	c.(9685-9687)cCt>cTt	p.P3229L		NM_198455	NP_940857	A2VEC9	SSPO_HUMAN	Homo sapiens SCO-spondin homolog (Bos taurus) (SSPO), mRNA.	3232	TSP type-1 11.				cell adhesion	extracellular space	peptidase inhibitor activity					Melanoma(164;0.165)|Ovarian(565;0.177)		OV - Ovarian serous cystadenocarcinoma(82;0.00625)			ACCCCCACACCTCTCTGCTCA	0.697000													20	56					0	0	1	0	0
C10orf140	387640	broad.mit.edu	37	10	21805466	21805467	+	In_Frame_Ins	INS	-	-	CCTCCT	rs138084841	by1000genomes	TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr10:21805466_21805467insCCTCCT	uc009xkd.3	-	3	3538_3539	c.1285_1286insAGGAGG	c.(1285-1287)ggg>gAGGAGGgg	p.428_429insEE	AK055656_uc001iqp.1_Non-coding_Transcript|C10orf140_uc021pnx.1_In_Frame_Ins_p.428_429insEE	NM_207371	NP_997254	Q1XH10	DLN1_HUMAN	Homo sapiens chromosome 10 open reading frame 140 (C10orf140), mRNA.	347						nucleus	nucleotide binding	p.E428_G429insEE(3)		kidney(1)|large_intestine(8)|lung(9)|ovary(1)|soft_tissue(1)|urinary_tract(1)	21						CCCGCTGCccccctcctcctcc	0.619													4	4	---	---	---	---					
GMIP	51291	broad.mit.edu	37	19	19748340	19748340	+	Frame_Shift_Del	DEL	C	C	-			TCGA-J4-A67L-01A-11D-A30E-08	TCGA-J4-A67L-10A-01D-A30H-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7657dad4-c2db-417a-a77c-4de308ef3f61	046e13f7-4c6e-4ee1-97c8-8adf4fa21c42	g.chr19:19748340delC	uc002nnd.3	-	10	1075	c.958delG	c.(958-960)gcgfs	p.A320fs	GMIP_uc010xrb.2_Frame_Shift_Del_p.A320fs|GMIP_uc010xrc.2_Frame_Shift_Del_p.A320fs	NM_016573	NP_057657	Q9P107	GMIP_HUMAN	Homo sapiens GEM interacting protein (GMIP), mRNA.	320					negative regulation of Rho GTPase activity|small GTPase mediated signal transduction	cytosol	Rho GTPase activator activity|metal ion binding|protein binding			breast(1)|endometrium(6)|kidney(1)|large_intestine(2)|lung(9)|ovary(1)|skin(1)|upper_aerodigestive_tract(2)|urinary_tract(1)	24						TCTGCCTGCGCCCCCCGCAGC	0.741													2	4	---	---	---	---					
