Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	validation_method	t_ref_count	validation_status	validation_tumor_sample	t_alt_count	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
TAF1A	9015	broad.mit.edu	37	1	222750876	222750877	+	Missense_Mutation	DNP	CG	AT	AT	rs145721552	by1000genomes	TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr1:222750876_222750877CG>AT	uc009xdz.2	-	4	723_724	c.514_515CG>AT	c.(514-516)cgg>ATg	p.R172M	TAF1A_uc001hni.2_Missense_Mutation_p.R58M|TAF1A_uc001hnj.3_Missense_Mutation_p.R172M|TAF1A_uc010pur.2_Missense_Mutation_p.R172M	NM_001201536	NP_001188465	Q15573	TAF1A_HUMAN	Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa (TAF1A), transcript variant 3, mRNA.	172					regulation of transcription, DNA-dependent|termination of RNA polymerase I transcription|transcription elongation from RNA polymerase I promoter|transcription from RNA polymerase II promoter|transcription initiation from RNA polymerase I promoter	RNA polymerase I transcription factor complex	DNA binding	p.R172R(2)		kidney(3)|large_intestine(3)|lung(11)|urinary_tract(1)	18				GBM - Glioblastoma multiforme(131;0.0186)		TAATATTTCCCGGGAAGACGTA	0.381000														490			13		0	0	6.4e-05	0	0
FRG1B	284802	broad.mit.edu	37	20	29628245	29628245	+	Missense_Mutation	SNP	G	A	A			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr20:29628245G>A	uc010ztl.1	+	2	189	c.157G>A	c.(157-159)Gcc>Acc	p.A53T	FRG1B_uc002wvm.1_Non-coding_Transcript|FRG1B_uc010ztj.1_Non-coding_Transcript|FRG1B_uc010gdr.1_Non-coding_Transcript|FRG1B_uc010ztk.1_Missense_Mutation_p.A5T					Homo sapiens FSHD region gene 1 family, member B (FRG1B), non-coding RNA.									p.A83T(2)		endometrium(10)|kidney(21)|lung(3)|pancreas(1)|prostate(9)|urinary_tract(9)	53						GGCTTTGTTGGCCTCAAATAG	0.353000														64			4		0	0	1.23904e-05	0	0
TBC1D3	729873	broad.mit.edu	37	17	36288233	36288234	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr17:36288233_36288234CG>AT	uc010wdk.1	+	4	503_504	c.502_503CG>AT	c.(502-504)cgg>ATg	p.R168M	TBC1D3_uc002hoo.2_Missense_Mutation_p.R107M|TBC1D3_uc002hop.2_Non-coding_Transcript|TBC1D3_uc010wdj.1_Missense_Mutation_p.R27M|TBC1D3_uc010cvf.1_Missense_Mutation_p.R107M|TBC1D3_uc002hoq.2_Missense_Mutation_p.R107M|DQ586040_uc002hpl.3_5'Flank|DQ587906_uc002hor.3_5'Flank|DQ585853_uc021tvy.1_5'Flank	NM_032258	NP_115634	Q8IZP1	TBC3A_HUMAN	Homo sapiens TBC1 domain family, member 3F (TBC1D3F), mRNA.	107	Rab-GAP TBC.					intracellular	Rab GTPase activator activity			breast(1)|large_intestine(1)|lung(1)|prostate(1)|upper_aerodigestive_tract(1)	5	Breast(7;2.97e-12)	Breast(25;0.102)|Ovarian(249;0.17)		UCEC - Uterine corpus endometrioid carcinoma (308;0.0182)		CATGAACATCCGGGGCCCGATG	0.554000														482			8		0	0	6.4e-05	0	0
APOB	338	broad.mit.edu	37	2	21234704	21234705	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr2:21234704_21234705CC>AA	uc002red.3	-	25	5163_5164	c.5035_5036GG>TT	c.(5035-5037)ggg>TTg	p.G1679L		NM_000384	NP_000375	P04114	APOB_HUMAN	Homo sapiens apolipoprotein B (including Ag(x) antigen) (APOB), mRNA.	1679					cholesterol homeostasis|cholesterol metabolic process|leukocyte migration|low-density lipoprotein particle clearance|low-density lipoprotein particle remodeling|platelet activation|positive regulation of cholesterol storage|positive regulation of macrophage derived foam cell differentiation|receptor-mediated endocytosis|response to virus	chylomicron remnant|clathrin-coated endocytic vesicle membrane|endoplasmic reticulum lumen|endoplasmic reticulum membrane|endosome lumen|endosome membrane|intermediate-density lipoprotein particle|low-density lipoprotein particle|mature chylomicron|microsome|plasma membrane|very-low-density lipoprotein particle	cholesterol transporter activity|enzyme binding|heparin binding|low-density lipoprotein particle receptor binding|phospholipid binding|protein heterodimerization activity			NS(5)|autonomic_ganglia(1)|breast(6)|central_nervous_system(4)|cervix(3)|endometrium(19)|kidney(10)|large_intestine(63)|liver(5)|lung(125)|ovary(16)|pancreas(1)|prostate(5)|skin(31)|stomach(1)|upper_aerodigestive_tract(4)|urinary_tract(6)	305	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)				Atorvastatin(DB01076)	CATAGATGCCCCAGAGAGGCCA	0.485000														431			10		0	0	6.4e-05	0	0
HIBADH	11112	broad.mit.edu	37	7	27565985	27565986	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr7:27565985_27565986CC>AA	uc003szf.3	-	7	1071_1072	c.858_859GG>TT	c.(856-861)ctggga>ctTTga	p.G287*	HIBADH_uc003szg.3_Nonsense_Mutation_p.G238*	NM_152740	NP_689953	P31937	3HIDH_HUMAN	Homo sapiens 3-hydroxyisobutyrate dehydrogenase (HIBADH), mRNA.	287					branched chain family amino acid catabolic process|pentose-phosphate shunt|valine metabolic process	mitochondrial matrix	3-hydroxyisobutyrate dehydrogenase activity|NAD binding|phosphogluconate dehydrogenase (decarboxylating) activity			endometrium(4)|kidney(2)|lung(3)|ovary(2)|prostate(1)	12			GBM - Glioblastoma multiforme(3;0.0368)		NADH(DB00157)	TGTGCCAATCCCAGATCCTAAA	0.460000														177			7		0	0	6.4e-05	0	0
NBPF10	100132406	broad.mit.edu	37	1	145296403	145296403	+	Silent	SNP	C	T	T	rs4996269	by1000genomes	TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr1:145296403C>T	uc021oul.1	+	2	360	c.325C>T	c.(325-327)Cta>Tta	p.L109L	NBPF10_uc021ots.1_Intron|NBPF10_uc010oye.2_Intron|NBPF10_uc021ouk.1_Silent_p.L109L|NBPF10_uc001emq.1_Intron	NM_001039703	NP_001034792	A6NDV3	A6NDV3_HUMAN	Homo sapiens neuroblastoma breakpoint family, member 10 (NBPF10), mRNA.	109										NS(3)|breast(1)|central_nervous_system(3)|endometrium(12)|kidney(23)|lung(15)|ovary(1)|prostate(7)|skin(6)|urinary_tract(2)	73	all_hematologic(923;0.032)			Colorectal(1306;1.36e-07)|KIRC - Kidney renal clear cell carcinoma(1967;0.00258)		GCTGACCCAGCTAAGGGAGAA	0.517000														313			8		0	0	5.18039e-06	0	0
COPG2	26958	broad.mit.edu	37	7	130295969	130295970	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr7:130295969_130295970CC>AA	uc003vqh.1	-	8	681_682	c.591_592GG>TT	c.(589-594)ttggga>ttTTga	p.197_198LG>F*		NM_012133	NP_036265	Q9UBF2	COPG2_HUMAN	Homo sapiens coatomer protein complex, subunit gamma 2 (COPG2), mRNA.	197					intra-Golgi vesicle-mediated transport|intracellular protein transport|retrograde vesicle-mediated transport, Golgi to ER	COPI vesicle coat	protein binding|structural molecule activity			large_intestine(1)	1	Melanoma(18;0.0435)					TACAGGACTCCCAATGCATGGT	0.342000														287			11		0	0	6.4e-05	0	0
THADA	63892	broad.mit.edu	37	2	43802077	43802078	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr2:43802077_43802078GG>TT	uc002rsw.4	-	10	1478_1479	c.1126_1127CC>AA	c.(1126-1128)ccg>AAg	p.P376K	THADA_uc002rsx.4_Missense_Mutation_p.P376K|THADA_uc002rsy.4_Non-coding_Transcript|THADA_uc010fas.1_Non-coding_Transcript|THADA_uc002rsz.3_Missense_Mutation_p.P86K|THADA_uc002rta.2_Missense_Mutation_p.P86K|THADA_uc002rtb.1_Missense_Mutation_p.P376K|THADA_uc002rtc.4_Missense_Mutation_p.P376K|THADA_uc002rtd.3_Missense_Mutation_p.P376K	NM_001083953	NP_071348	Q6YHU6	THADA_HUMAN	Homo sapiens thyroid adenoma associated (THADA), transcript variant 3, mRNA.	376							binding			breast(1)|endometrium(9)|kidney(5)|large_intestine(9)|liver(1)|lung(28)|ovary(4)|prostate(1)|skin(1)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(5)	66		Acute lymphoblastic leukemia(82;0.00361)|all_hematologic(82;0.00837)				CGTTAGGCTCGGGGAACTTGAT	0.426000														398			8		0	0	6.4e-05	0	0
FRG1B	284802	broad.mit.edu	37	20	29628243	29628243	+	Missense_Mutation	SNP	T	C	C			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr20:29628243T>C	uc010ztl.1	+	2	187	c.155T>C	c.(154-156)tTg>tCg	p.L52S	FRG1B_uc002wvm.1_Non-coding_Transcript|FRG1B_uc010ztj.1_Non-coding_Transcript|FRG1B_uc010gdr.1_Non-coding_Transcript|FRG1B_uc010ztk.1_Missense_Mutation_p.L4S					Homo sapiens FSHD region gene 1 family, member B (FRG1B), non-coding RNA.									p.L82S(2)		endometrium(10)|kidney(21)|lung(3)|pancreas(1)|prostate(9)|urinary_tract(9)	53						ATGGCTTTGTTGGCCTCAAAT	0.363000														65			4		0	0	1.23904e-05	0	0
FAT3	120114	broad.mit.edu	37	11	92495212	92495213	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr11:92495212_92495213CC>AA	uc001pdj.4	+	3	3877_3878	c.3860_3861CC>AA	c.(3859-3861)ccc>cAA	p.P1287Q		NM_001008781	NP_001008781	Q8TDW7	FAT3_HUMAN	Homo sapiens FAT tumor suppressor homolog 3 (Drosophila) (FAT3), mRNA.	1287	Cadherin 12.				homophilic cell adhesion|multicellular organismal development	integral to membrane|plasma membrane	calcium ion binding			NS(1)|breast(2)|endometrium(10)|kidney(4)|large_intestine(11)|liver(2)|lung(37)|ovary(5)|pancreas(1)|prostate(4)|skin(2)|stomach(1)|upper_aerodigestive_tract(5)	85		Acute lymphoblastic leukemia(157;3.01e-05)|all_hematologic(158;0.00858)				GATGAGGGCCCCAACGCAGAAA	0.450000										TCGA Ovarian(4;0.039)				348			9		0	0	6.4e-05	0	0
PPM1B	5495	broad.mit.edu	37	2	44428944	44428945	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr2:44428944_44428945GG>TT	uc002rtt.3	+	1	1034_1035	c.606_607GG>TT	c.(604-609)ctgggg>ctTTgg	p.G203W	PPM1B_uc002rts.3_Missense_Mutation_p.G203W|PPM1B_uc002rtu.3_Missense_Mutation_p.G203W|PPM1B_uc002rtv.3_Intron|PPM1B_uc002rtw.3_Missense_Mutation_p.G203W|PPM1B_uc002rtx.3_Missense_Mutation_p.G203W	NM_002706	NP_002697	O75688	PPM1B_HUMAN	Homo sapiens protein phosphatase, Mg2+/Mn2+ dependent, 1B (PPM1B), transcript variant 1, mRNA.	203					protein dephosphorylation	protein serine/threonine phosphatase complex	magnesium ion binding|manganese ion binding|protein binding|protein serine/threonine phosphatase activity	p.G203E(1)		kidney(4)|large_intestine(3)|lung(7)|skin(2)	16		all_hematologic(82;0.151)|Acute lymphoblastic leukemia(82;0.175)				CTCGTGCTCTGGGGGACTATGA	0.446000														385			7		0	0	6.4e-05	0	0
DISP1	84976	broad.mit.edu	37	1	223176120	223176121	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr1:223176120_223176121GG>TT	uc001hnu.2	+	9	1707_1708	c.1381_1382GG>TT	c.(1381-1383)ggg>TTg	p.G461L		NM_032890	NP_116279	Q96F81	DISP1_HUMAN	Homo sapiens dispatched homolog 1 (Drosophila) (DISP1), mRNA.	461					diaphragm development|protein homotrimerization|regulation of protein secretion|smoothened signaling pathway	basolateral plasma membrane|integral to membrane	hedgehog receptor activity|peptide transporter activity			breast(1)|central_nervous_system(1)|cervix(1)|endometrium(7)|kidney(3)|large_intestine(20)|lung(25)|prostate(4)|skin(1)|stomach(1)|urinary_tract(5)	69				GBM - Glioblastoma multiforme(131;0.102)		CACAGAGAAAGGGGAGAGCATG	0.460000														377			10		0	0	6.4e-05	0	0
IDE	3416	broad.mit.edu	37	10	94294477	94294478	+	Nonsense_Mutation	DNP	CC	AA	AA	rs74593235		TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr10:94294477_94294478CC>AA	uc001kia.3	-	2	424_425	c.348_349GG>TT	c.(346-351)ttggga>ttTTga	p.116_117LG>F*		NM_004969	NP_004960	P14735	IDE_HUMAN	Homo sapiens insulin-degrading enzyme (IDE), transcript variant 1, mRNA.	116					beta-amyloid metabolic process|bradykinin catabolic process|interspecies interaction between organisms|sex differentiation	cell surface|extracellular space|soluble fraction	ATP binding|metalloendopeptidase activity|protein homodimerization activity|signal transducer activity|zinc ion binding			breast(2)|central_nervous_system(1)|endometrium(2)|kidney(3)|large_intestine(10)|liver(1)|lung(10)|ovary(2)|urinary_tract(2)	33					Bacitracin(DB00626)|Insulin Glargine recombinant(DB00047)|Insulin Lyspro recombinant(DB00046)|Insulin recombinant(DB00030)|Insulin, porcine(DB00071)	TTCTTTGTTCCCAAAAAAAGCA	0.356000														343			8		0	0	6.4e-05	0	0
FAM114A2	10827	broad.mit.edu	37	5	153377364	153377365	+	Splice_Site	DNP	CC	AA	AA	rs146980921		TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr5:153377364_153377365CC>AA	uc003lvd.3	-	13	1471	c.1329_splice	c.e13+1	p.G443_splice	FAM114A2_uc003lvb.3_Splice_Site_p.G443_splice|FAM114A2_uc003lve.3_Splice_Site_p.G259_splice|FAM114A2_uc011dda.2_Splice_Site_p.G373_splice|FAM114A2_uc003lvc.3_Splice_Site_p.G443_splice	NM_018691	NP_061161	Q9NRY5	F1142_HUMAN	Homo sapiens family with sequence similarity 114, member A2 (FAM114A2), mRNA.	443							purine nucleotide binding			NS(1)|breast(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(1)|lung(9)|skin(1)|urinary_tract(1)	18						GATTCTTACCCCAGCAGTTGTT	0.361000														221			10		0	0	6.4e-05	0	0
APOB	338	broad.mit.edu	37	2	21233980	21233981	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr2:21233980_21233981CC>AA	uc002red.3	-	25	5887_5888	c.5759_5760GG>TT	c.(5758-5760)tgg>tTT	p.W1920F		NM_000384	NP_000375	P04114	APOB_HUMAN	Homo sapiens apolipoprotein B (including Ag(x) antigen) (APOB), mRNA.	1920					cholesterol homeostasis|cholesterol metabolic process|leukocyte migration|low-density lipoprotein particle clearance|low-density lipoprotein particle remodeling|platelet activation|positive regulation of cholesterol storage|positive regulation of macrophage derived foam cell differentiation|receptor-mediated endocytosis|response to virus	chylomicron remnant|clathrin-coated endocytic vesicle membrane|endoplasmic reticulum lumen|endoplasmic reticulum membrane|endosome lumen|endosome membrane|intermediate-density lipoprotein particle|low-density lipoprotein particle|mature chylomicron|microsome|plasma membrane|very-low-density lipoprotein particle	cholesterol transporter activity|enzyme binding|heparin binding|low-density lipoprotein particle receptor binding|phospholipid binding|protein heterodimerization activity	p.W1920C(2)		NS(5)|autonomic_ganglia(1)|breast(6)|central_nervous_system(4)|cervix(3)|endometrium(19)|kidney(10)|large_intestine(63)|liver(5)|lung(125)|ovary(16)|pancreas(1)|prostate(5)|skin(31)|stomach(1)|upper_aerodigestive_tract(4)|urinary_tract(6)	305	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)				Atorvastatin(DB01076)	TATGTTCTCCCCAGAGAGCGAG	0.455000														423			11		0	0	6.4e-05	0	0
HYDIN	54768	broad.mit.edu	37	GL000192.1	311344	311344	+	RNA	SNP	C	T	T			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chrGL000192.1:311344C>T	uc010yij.1	-	6		c.1025G>A			HYDIN_uc021vdl.1_Non-coding_Transcript	NM_017558		Q4G0P3	HYDIN_HUMAN	Homo sapiens HYDIN, axonemal central pair apparatus protein (HYDIN), transcript variant 2, mRNA.											breast(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(17)|lung(12)|ovary(2)|skin(3)|stomach(2)|upper_aerodigestive_tract(1)	43		Ovarian(137;0.0654)				TACCTTGCTGCAATTAAGAGC	0.577000														28			6		0	0	3.59834e-05	0	0
IQCJ-SCHIP1	100505385	broad.mit.edu	37	3	159482571	159482571	+	Frame_Shift_Del	DEL	G	-	-			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr3:159482571delG	uc003fcq.2	+	4	812	c.631delG	c.(631-633)gggfs	p.G211fs	IQCJ-SCHIP1_uc003fcr.2_Frame_Shift_Del_p.G184fs|IQCJ-SCHIP1_uc003fcs.2_Frame_Shift_Del_p.G135fs|IQCJ-SCHIP1_uc003fct.2_Frame_Shift_Del_p.G135fs|IQCJ-SCHIP1_uc021xgm.1_Intron|IQCJ-SCHIP1_uc010hvz.1_Frame_Shift_Del_p.G108fs	NM_001197113	NP_001184042	Q9P0W5	SCHI1_HUMAN	Homo sapiens IQCJ-SCHIP1 readthrough (IQCJ-SCHIP1), transcript variant 1, mRNA.	135						cytoplasm	identical protein binding|protein binding			central_nervous_system(1)|cervix(1)|endometrium(1)|large_intestine(2)|lung(7)	12						CGGCGGCGGCGGGGGCAGGAG	0.731													---	4	---	---	2	---					
SSPO	23145	broad.mit.edu	37	7	149476668	149476669	+	Frame_Shift_Ins	INS	-	A	A			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr7:149476668_149476669insA	uc010lpk.3	+	9	1118_1119	c.1118_1119insA	c.(1117-1119)cccfs	p.P373fs	SSPO_uc010lpl.1_Intron	NM_198455	NP_940857	A2VEC9	SSPO_HUMAN	Homo sapiens SCO-spondin homolog (Bos taurus) (SSPO), mRNA.	373	VWFD 1.				cell adhesion	extracellular space	peptidase inhibitor activity					Melanoma(164;0.165)|Ovarian(565;0.177)		OV - Ovarian serous cystadenocarcinoma(82;0.00625)			CTGTGACAGCCCCTGGGGCTCA	0.614													---	4	---	---	2	---					
IDE	3416	broad.mit.edu	37	10	94243044	94243045	+	Frame_Shift_Ins	INS	-	A	A			TCGA-GN-A261-06A-12D-A197-08	TCGA-GN-A261-10A-01D-A199-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f57cdf6a-33d6-4723-a70a-121cda122019	4f87b59e-99a2-463f-813a-620ead1ed69d	g.chr10:94243044_94243045insA	uc001kia.3	-	13	1782_1783	c.1706_1707insT	c.(1705-1707)ttgfs	p.L569fs	IDE_uc010qnp.2_Frame_Shift_Ins_p.L14fs|IDE_uc001khz.3_Frame_Shift_Ins_p.L14fs	NM_004969	NP_004960	P14735	IDE_HUMAN	Homo sapiens insulin-degrading enzyme (IDE), transcript variant 1, mRNA.	569				FFL -> KKK (in Ref. 2; AAA52712).	beta-amyloid metabolic process|bradykinin catabolic process|interspecies interaction between organisms|sex differentiation	cell surface|extracellular space|soluble fraction	ATP binding|metalloendopeptidase activity|protein homodimerization activity|signal transducer activity|zinc ion binding			breast(2)|central_nervous_system(1)|endometrium(2)|kidney(3)|large_intestine(10)|liver(1)|lung(10)|ovary(2)|urinary_tract(2)	33					Bacitracin(DB00626)|Insulin Glargine recombinant(DB00047)|Insulin Lyspro recombinant(DB00046)|Insulin recombinant(DB00030)|Insulin, porcine(DB00071)	AAGCCTTCGGCAAAAAAAACTT	0.351													---	338	---	---	7	---					
